--- MITgcm/tools/genmake2 2004/03/16 18:20:34 1.73 +++ MITgcm/tools/genmake2 2005/09/05 13:39:28 1.128 @@ -1,6 +1,6 @@ #! /usr/bin/env bash # -# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/genmake2,v 1.73 2004/03/16 18:20:34 edhill Exp $ +# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/genmake2,v 1.128 2005/09/05 13:39:28 edhill Exp $ # # Makefile generator for MITgcm UV codes # created by cnh 03/98 @@ -67,11 +67,187 @@ done PACKAGES=$new_packages rm -f ./p[1,2].tmp + return $matched else echo "Warning: can't read package groups definition file: $PKG_GROUPS" fi } +# Check for broken environments (eg. cygwin, MacOSX w/HFS+) that +# cannot distinguish [*.F/*.F90] from [*.f/*.f90] files. +check_for_broken_Ff() { + # Do we have defaults for $FS and/or $FS90 ? + tfs=f + tfs9=f90 + if test "x$FS" != x ; then + tfs="$FS" + fi + if test "x$FS90" != x ; then + tfs9="$FS90" + fi + + # First check the ability to create a *.F/.f pair. + cat <> genmake_hello.F + program hello + write(*,*) 'hi' + stop + end +EOF + cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1 + RETVAL=$? + if test "x$RETVAL" != x0 ; then + if test "x$FS" = x ; then + FS='for' + FS90='fr9' + check_for_broken_Ff + else + cat <&1 +ERROR: Your file system cannot distinguish between *.F and *.f files + (fails the "cp" test) and this program cannot find a suitable + replacement extension. Please try a different build environment or + contact the list for help. + +EOF + exit -1 + fi + return + fi + rm -f genmake_hello.* + + # Check the ability of ${MAKE} and ${LN} to use the current set + # of extensions. + cat <> genmake_hello.F + program hello + write(*,*) 'hi' + stop + end +EOF + test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst" + cat <> $MAKEFILE +.SUFFIXES: +.SUFFIXES: .$tfs .F +.F.$tfs: + $LN \$< \$@ +EOF + $MAKE "genmake_hello."$tfs > /dev/null 2>&1 + RETVAL=$? + if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then + if test "x$FS" = x ; then + FS='for' + FS90='fr9' + check_for_broken_Ff + else + cat <&1 +ERROR: Your file system cannot distinguish between *.F and *.f files + (fails the "make/ln" test) and this program cannot find a suitable + replacement extension. Please try a different build environment or + contact the list for help. + +EOF + exit -1 + return + fi + fi + rm -f genmake_hello.* $MAKEFILE + test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE + + # If we make it here, use the extensions + FS=$tfs + FS90=$tfs9 + return +} + + +look_for_makedepend() { + + # The "original" makedepend is part of the Imake system that is + # most often distributed with XFree86 or with an XFree86 source + # package. As a result, many machines (eg. generic Linux) do not + # have a system-default "makedepend" available. For those + # systems, we have two fall-back options: + # + # 1) a makedepend implementation shipped with the cyrus-imapd + # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/ + # + # 2) a known-buggy xmakedpend shell script + # + # So the choices are, in order: + # + # 1) use the user-specified program + # 2) use a system-wide default + # 3) locally build and use the cyrus implementation + # 4) fall back to the buggy local xmakedpend script + # + if test "x${MAKEDEPEND}" = x ; then + which makedepend > /dev/null 2>&1 + RV0=$? + test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst" + # echo 'MAKEFILE="'$MAKEFILE'"' + cat <> $MAKEFILE +# THIS IS A TEST MAKEFILE GENERATED BY "genmake2" +# +# Some "makedepend" implementations will die if they cannot +# find a Makefile -- so this file is here to gives them an +# empty one to find and parse. +EOF + cat <> genmake_tc.f + program test + write(*,*) 'test' + stop + end +EOF + makedepend genmake_tc.f > /dev/null 2>&1 + RV1=$? + test -f $MAKEFILE && rm -f $MAKEFILE + test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE + if test "x${RV0}${RV1}" = x00 ; then + MAKEDEPEND=makedepend + else + echo " a system-default makedepend was not found." + + # Try to build the cyrus implementation + build_cyrus_makedepend + RETVAL=$? + if test "x$RETVAL" != x0 ; then + MAKEDEPEND='$(TOOLSDIR)/xmakedepend' + fi + rm -f ./genmake_cy_md + fi + else + # echo "MAKEDEPEND=${MAKEDEPEND}" + echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1 + RETVAL=$? + if test x"$RETVAL" = x0 ; then + build_cyrus_makedepend + fi + fi +} + + +build_cyrus_makedepend() { + rm -f ./genmake_cy_md + ( + cd $ROOTDIR/tools/cyrus-imapd-makedepend \ + && ./configure > /dev/null 2>&1 \ + && make > /dev/null 2>&1 + if test -x ./makedepend.exe ; then + $LN ./makedepend.exe ./makedepend + fi + ./makedepend ifparser.c > /dev/null 2>&1 \ + && echo "true" + ) > ./genmake_cy_md + grep true ./genmake_cy_md > /dev/null 2>&1 + RETVAL=$? + rm -f ./genmake_cy_md + if test "x$RETVAL" = x0 ; then + MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend' + return 0 + else + echo "WARNING: unable to build cyrus-imapd-makedepend" + return 1 + fi +} + # Guess possible config options for this host find_possible_configs() { @@ -82,6 +258,7 @@ tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'` tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'` PLATFORM=$tmp3 + echo $PLATFORM | grep cygwin > /dev/null 2>&1 && PLATFORM=cygwin_ia32 OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")` echo " The platform appears to be: $PLATFORM" @@ -101,52 +278,50 @@ CPP="cpp -traditional -P" fi - # The "original" makedepend is part of the Imake system that is - # most often distributed with XFree86 or with an XFree86 source - # package. As a result, many machines (eg. generic Linux) do not - # have a system-default "makedepend" available. For those - # systems, we have two fall-back options: - # - # 1) a makedepend implementation shipped with the cyrus-imapd - # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/ - # - # 2) a known-buggy xmakedpend shell script - # - # So the choices are, in order: - # - # 1) use the user-specified program - # 2) use a system-wide default - # 3) locally build and use the cyrus implementation - # 4) fall back to the buggy local xmakedpend script - # - if test "x${MAKEDEPEND}" = x ; then - which makedepend > /dev/null 2>&1 - RETVAL=$? - if test ! "x${RETVAL}" = x0 ; then - echo " a system-default makedepend was not found." - - # Try to build the cyrus impl - rm -f ./genmake_cy_md - ( - cd $ROOTDIR/tools/cyrus-imapd-makedepend \ - && ./configure > /dev/null 2>&1 \ - && make > /dev/null 2>&1 \ - && ./makedepend ifparser.c > /dev/null 2>&1 \ - && echo "true" - ) > ./genmake_cy_md - grep true ./genmake_cy_md > /dev/null 2>&1 - RETVAL=$? - if test "x$RETVAL" = x0 ; then - MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend' - else - MAKEDEPEND='$(TOOLSDIR)/xmakedepend' - fi - rm -f ./genmake_cy_md - fi + look_for_makedepend + + #================================================================ + # look for possible C compilers + tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc" + p_CC= + for c in $tmp ; do + rm -f ./genmake_hello.c ./genmake_hello + cat >> genmake_hello.c << EOF +#include +int main(int argc, char **argv) { + printf("Hello!\n"); + return 0; +} +EOF + $c -o genmake_hello genmake_hello.c > /dev/null 2>&1 + RETVAL=$? + if test "x${RETVAL}" = x0 ; then + p_CC="$p_CC $c" + fi + done + rm -f ./genmake_hello.c ./genmake_hello + if test "x${p_CC}" = x ; then + cat 1>&2 < genmake_test.c </dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3` RETVAL=$? if test "x$RETVAL" != x0 ; then FC_NAMEMANGLE=$default_nm @@ -401,13 +595,13 @@ EOF return 1 fi - cat > genmake_tcomp.f < genmake_tcomp.$FS <> genmake_warnings 2>&1 + $FC $FFLAGS $DEFINES -c genmake_tcomp.$FS >> genmake_warnings 2>&1 RETVAL=$? if test "x$RETVAL" != x0 ; then FC_NAMEMANGLE=$default_nm @@ -419,7 +613,7 @@ EOF return 1 fi - f_tcall=`nm genmake_tcomp.o | grep 'T ' | grep tcall | cut -d ' ' -f 3` + f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3` RETVAL=$? if test "x$RETVAL" != x0 ; then FC_NAMEMANGLE=$default_nm @@ -473,19 +667,19 @@ *curtim = *curtim/1.E6; } EOF - make genmake_tc_1.o >> genmake_tc.log 2>&1 + make genmake_tc_1.o >> genmake_warnings 2>&1 RET_C=$? - cat < genmake_tc_2.f + cat < genmake_tc_2.$FS program hello Real*8 wtime external cloc call cloc(wtime) print *," HELLO WORLD", wtime - end program hello + end EOF - $FC $FFLAGS -o genmake_tc genmake_tc_2.f genmake_tc_1.o >> genmake_tc.log 2>&1 + $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1 RET_F=$? - test -x ./genmake_tc && ./genmake_tc >> genmake_tc.log 2>&1 + test -x ./genmake_tc && ./genmake_tc >> genmake_warnings 2>&1 RETVAL=$? if test "x$RETVAL" = x0 ; then HAVE_CLOC=t @@ -495,10 +689,61 @@ } +check_HAVE_STAT() { + get_fortran_c_namemangling + cat < genmake_tc_1.c +$FC_NAMEMANGLE +#include +#include +#include +#include +#include +void FC_NAMEMANGLE(tfsize) ( int *nbyte ) +{ + char name[512]; + struct stat astat; + + name[0] = 'a'; name[1] = '\0'; + if (! stat(name, &astat)) + *nbyte = (int)(astat.st_size); + else + *nbyte = -1; +} +EOF + make genmake_tc_1.o >> genmake_tc.log 2>&1 + RET_C=$? + cat < genmake_tc_2.$FS + program hello + integer nbyte + call tfsize(nbyte) + print *," HELLO WORLD", nbyte + end +EOF + $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_tc.log 2>&1 + RET_F=$? + test -x ./genmake_tc && ./genmake_tc >> genmake_tc.log 2>&1 + RETVAL=$? + if test "x$RETVAL" = x0 ; then + HAVE_STAT=t + DEFINES="$DEFINES -DHAVE_STAT" + fi + rm -f genmake_tc* +} + + check_netcdf_libs() { + if test ! "x$SKIP_NETCDF_CHECK" = x ; then + return + fi + echo "" > genmake_tnc.log cat < genmake_tnc.F program fgennc #include "netcdf.inc" +EOF + if test ! "x$MPI" = x ; then + echo '#include "mpif.h"' >> genmake_tnc.F + fi + cat <> genmake_tnc.F integer iret, ncid, xid iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid) IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret) @@ -508,22 +753,41 @@ IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret) end EOF - $CPP genmake_tnc.F > genmake_tnc.f \ - && $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f $LIBS >> genmake_tnc.log 2>&1 + echo "Executing:" > genmake_tnc.log + echo " $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS" \ + > genmake_tnc.log + RET_CPP=f + $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null \ + && RET_CPP=t + if test "x$RET_CPP" = xf ; then + echo " WARNING: CPP failed to pre-process the netcdf test." \ + > genmake_tnc.log + echo " Please check that \$INCLUDES is properly set." \ + > genmake_tnc.log + fi + echo "Executing:" > genmake_tnc.log + echo " $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS" > genmake_tnc.log + echo " $LINK -o genmake_tnc.o $LIBS" > genmake_tnc.log + $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \ + && $LINK -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1 RET_COMPILE=$? - test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1 - RETVAL=$? - if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then + + #EH3 Remove test program execution for machines that either disallow + #EH3 execution or cannot support it (eg. cross-compilers) + #EH3 + #EH3 test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1 + #EH3 RETVAL=$? + #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then + + if test "x$RET_COMPILE" = x0 ; then HAVE_NETCDF=t else # try again with "-lnetcdf" added to the libs - $CPP genmake_tnc.F > genmake_tnc.f \ - && $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f \ - $LIBS -lnetcdf >> genmake_tnc_2.log 2>&1 + $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null \ + && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \ + && $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1 RET_COMPILE=$? - test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1 - RETVAL=$? - if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then + if test "x$RET_COMPILE" = x0 ; then LIBS="$LIBS -lnetcdf" HAVE_NETCDF=t else @@ -546,20 +810,21 @@ LN= S64= KPP= -FC= -CPP= +#FC= +#CC=gcc +#CPP= LINK= DEFINES= PACKAGES= ENABLE= DISABLE= -MAKEFILE= -MAKEDEPEND= +# MAKEFILE= +# MAKEDEPEND= PDEPEND= DUMPSTATE=t PDEFAULT= OPTFILE= -INCLUDES="-I." +INCLUDES="-I. $INCLUDES" FFLAGS= FOPTIM= CFLAGS= @@ -572,13 +837,17 @@ NOOPTFLAGS= MPI= MPIPATH= +TS= -# DEFINES checked by test compilation +# DEFINES checked by test compilation or command-line HAVE_SYSTEM= HAVE_FDATE= FC_NAMEMANGLE= HAVE_CLOC= +HAVE_STAT= HAVE_NETCDF= +HAVE_ETIME= +IGNORE_TIME= MODS= TOOLSDIR= @@ -589,11 +858,13 @@ G2ARGS= BASH= PWD=`pwd` -MAKE=make -AWK=awk -THISHOSTNAME=`hostname` +test "x$MAKE" = x && MAKE=make +test "x$AWK" = x && AWK=awk +THISHOST=`hostname` THISCWD=`pwd` THISDATE=`date` +THISUSER=`echo $USER` +THISVER= MACHINE=`uname -a` EXECUTABLE= EXEHOOK= @@ -603,6 +874,8 @@ if test "x$MITGCM_IEEE" != x ; then IEEE=$MITGCM_IEEE fi +FS= +FS90= AUTODIFF_PKG_USED=f AD_OPTFILE= @@ -620,14 +893,14 @@ # The following state can be set directly by command-line switches gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE" -gm_s2="FC CPP IEEE MPI JAM DUMPSTATE STANDARDDIRS" +gm_s2="FC CPP IEEE TS MPI JAM DUMPSTATE STANDARDDIRS" # The following state is not directly set by command-line switches gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM " gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS" -gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOSTNAME THISDATE MACHINE" +gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE" gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF" -gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE" +gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME" # The following are all related to adjoint/tangent-linear stuff gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS" @@ -657,7 +930,7 @@ fi done printf " getting local config information: " -if test -e $gm_local ; then +if test -f $gm_local ; then echo "using $gm_local" . $gm_local # echo "DISABLE=$DISABLE" @@ -666,7 +939,7 @@ echo "none found" fi -# echo "$0::$1:$2:$3:$4:$5:$6:$7:" +#echo "$0::$1:$2:$3:$4:$5:$6:$7:" #OPTIONS= #n=0 #for i ; do @@ -678,7 +951,7 @@ #done #parse_options ac_prev= -for ac_option ; do +for ac_option in "$@" ; do G2ARGS="$G2ARGS \"$ac_option\"" @@ -774,17 +1047,35 @@ # ac_prev=cpp ;; # -cpp=* | --cpp=*) # CPP=$ac_optarg ;; - + + -cc | --cc) + ac_prev=CC ;; + -cc=* | --cc=*) + CC=$ac_optarg ;; + -fortran | --fortran | -fc | --fc) ac_prev=FC ;; -fc=* | --fc=*) FC=$ac_optarg ;; + -fs | --fs) + ac_prev=FS ;; + -fs=* | --fs=*) + FS=$ac_optarg ;; + + -fs90 | --fs90) + ac_prev=FS90 ;; + -fs90=* | --fs90=*) + FS90=$ac_optarg ;; + -ieee | --ieee) IEEE=true ;; -noieee | --noieee) IEEE= ;; + -ts | --ts) + TS=true ;; + -mpi | --mpi) MPI=true ;; -mpi=* | --mpi=*) @@ -808,6 +1099,9 @@ ac_prev=TAMC_EXTRA ;; -tamc_extra=* | --tamc_extra=*) TAMC_EXTRA=$ac_optarg ;; + + -ignoretime | -ignore_time | --ignoretime | --ignore_time) + IGNORE_TIME="-DIGNORE_TIME" ;; -*) echo "Error: unrecognized option: "$ac_option @@ -823,6 +1117,7 @@ done + if test -f ./.genmakerc ; then echo echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\"" @@ -835,8 +1130,10 @@ echo fi +# Find the MITgcm ${ROOTDIR} if test "x${ROOTDIR}" = x ; then - if test "${PWD##/*/}" = "bin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then + tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'` + if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then ROOTDIR=".." else for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do @@ -860,6 +1157,15 @@ exit 1 fi +# Find the MITgcm ${THISVER} +if test -f "${ROOTDIR}/doc/tag-index" ; then + THISVER=`grep '^checkpoint' ${ROOTDIR}/doc/tag-index | head -1` +fi + +if test "x$MAKEFILE" = x ; then + MAKEFILE="Makefile" +fi + echo " getting OPTFILE information: " if test "x${OPTFILE}" = x ; then if test "x$MITGCM_OF" = x ; then @@ -916,7 +1222,10 @@ fi fi -# Check that FC, LINK, CPP, S64, LN, and MAKE are defined. If not, +#==================================================================== +# Set default values if not set by the optfile +# +# Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined. If not, # either set defaults or complain and abort! if test ! "x$BASH" = x ; then # add a trailing space so that it works within the Makefile syntax (see below) @@ -932,6 +1241,16 @@ EOF exit 1 fi +if test "x$CC" = x ; then + CC=cc +# cat <&2 +# Error: no C compiler: please specify using one of the following: +# 1) within the options file ("CC=...") as specified by "-of=OPTFILE" +# 2) the "-cc=XXX" command-line option +# 3) the "./genmake_local" file +# EOF +# exit 1 +fi if test "x$LINK" = x ; then LINK=$FC fi @@ -942,8 +1261,8 @@ CPP=cpp fi #EH3 === UGLY === -# The following an ugly little hack to check for $CPP in /lib/ and it -# should eventually be replaced with a more general function that +# The following is an ugly little hack to check for $CPP in /lib/ and +# it should eventually be replaced with a more general function that # searches a combo of the user's path and a list of "usual suspects" # to find the correct location for binaries such as $CPP. for i in " " "/lib/" ; do @@ -966,9 +1285,7 @@ else rm -f test_cpp fi -if test "x$MAKEDEPEND" = x ; then - MAKEDEPEND=makedepend -fi +look_for_makedepend if test "x$LN" = x ; then LN="ln -s" fi @@ -986,19 +1303,27 @@ fi rm -f genmake_test_ln genmake_tlink +# Check for broken *.F/*.f handling and fix if possible +check_for_broken_Ff + if test ! "x$MPI" = x ; then echo " Turning on MPI cpp macros" DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI" fi +if test ! "x$TS" = x ; then + echo " Turning on timing per timestep" + DEFINES="$DEFINES -DTIME_PER_TIMESTEP" +fi + printf "\n=== Checking system libraries ===\n" printf " Do we have the system() command using $FC... " -cat > genmake_tcomp.f < genmake_tcomp.$FS < genmake_tcomp.log 2>&1 +$FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1 RETVAL=$? if test "x$RETVAL" = x0 ; then HAVE_SYSTEM=t @@ -1011,7 +1336,7 @@ rm -f genmake_tcomp* printf " Do we have the fdate() command using $FC... " -cat > genmake_tcomp.f < genmake_tcomp.$FS < genmake_tcomp.log 2>&1 +$FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1 RETVAL=$? if test "x$RETVAL" = x0 ; then HAVE_FDATE=t @@ -1031,6 +1356,28 @@ fi rm -f genmake_tcomp* +printf " Do we have the etime() command using $FC... " +cat > genmake_tcomp.$FS < genmake_tcomp.log 2>&1 +RETVAL=$? +if test "x$RETVAL" = x0 ; then + HAVE_ETIME=t + DEFINES="$DEFINES -DHAVE_ETIME" + echo "yes" +else + HAVE_ETIME= + echo "no" +fi +rm -f genmake_tcomp* + printf " Can we call simple C routines (here, \"cloc()\") using $FC... " check_HAVE_CLOC if test "x$HAVE_CLOC" != x ; then @@ -1040,6 +1387,15 @@ fi rm -f genmake_t* +printf " Can we use stat() through C calls... " +check_HAVE_STAT +if test "x$HAVE_STAT" != x ; then + echo "yes" +else + echo "no" +fi +rm -f genmake_t* + printf " Can we create NetCDF-enabled binaries... " check_netcdf_libs if test "x$HAVE_NETCDF" != x ; then @@ -1047,7 +1403,7 @@ else echo "no" fi - +DEFINES="$DEFINES $IGNORE_TIME" printf "\n=== Setting defaults ===\n" printf " Adding MODS directories: " @@ -1064,15 +1420,13 @@ done echo -if test "x$MAKEFILE" = x ; then - MAKEFILE="Makefile" -fi if test "x${PLATFORM}" = x ; then PLATFORM=$p_PLATFORM fi if test "x${EXEDIR}" = x ; then - if test "${PWD##/*/}" = "bin" -a -d ../exe -a $ROOTDIR = .. ; then + tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'` + if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then EXEDIR=../exe else EXEDIR=. @@ -1091,7 +1445,30 @@ exit 1 fi if test "x$S64" = x ; then - S64='$(TOOLSDIR)/set64bitConst.sh' + echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1 + RETVAL=$? + if test "x${RETVAL}" = x0 ; then + S64='$(TOOLSDIR)/set64bitConst.sh' + else + echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1 + RETVAL=$? + if test "x${RETVAL}" = x0 ; then + S64='$(TOOLSDIR)/set64bitConst.csh' + else + cat <> ./.tmp_pack +done +for i in `grep "-" ./.tmp_pack` ; do + j=`echo $i | sed 's/[-]//'` + DISABLE="$DISABLE $j" +done pack= for p in $PACKAGES ; do addit="t" @@ -1212,21 +1597,57 @@ echo " applying ENABLE settings" echo "" > ./.tmp_pack PACKAGES="$PACKAGES $ENABLE" +# Test if each explicitly referenced package exists for i in $PACKAGES ; do - if test ! -d "$ROOTDIR/pkg/$i" ; then + j=`echo $i | sed 's/[-+]//'` + if test ! -d "$ROOTDIR/pkg/$j" ; then echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\"" - exit 1 + exit 1 fi echo $i >> ./.tmp_pack done -pack=`cat ./.tmp_pack | sort | uniq` -rm -f ./.tmp_pack PACKAGES= -for i in $pack ; do +for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do PACKAGES="$PACKAGES $i" done +rm -f ./.tmp_pack echo " packages are: $PACKAGES" +# Check availability of NetCDF and then either build the MNC template +# files or delete mnc from the list of available packages. +echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1 +RETVAL=$? +if test "x$RETVAL" = x0 ; then + if test "x$HAVE_NETCDF" != xt ; then + cat < make_mnc.errors 2>&1 + RETVAL=$? + if test "x${RETVAL}" = x0 ; then + rm -f make_mnc.errors + else + echo "Error: problem encountered while building source files in pkg/mnc:" + cat make_mnc.errors 1>&2 + exit 1 + fi + fi +fi + echo " applying package dependency rules" ck= while test "x$ck" != xtt ; do @@ -1291,7 +1712,8 @@ echo " the dependency rules for \"$dname\"" exit 1 fi - i=$(( $i + 1 )) + i=`echo "$i + 1" | bc -l` + #i=$(( $i + 1 )) done ck=$ck"t" done @@ -1310,33 +1732,6 @@ fi done -# Build MNC templates and check for ability to build and use NetCDF -echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1 -RETVAL=$? -if test "x$RETVAL" = x0 ; then - ( cd $ROOTDIR"/pkg/mnc" && $MAKE templates ) > make_mnc.errors 2>&1 - RETVAL=$? - if test "x${RETVAL}" = x0 ; then - rm -f make_mnc.errors - else - echo "Error: problem encountered while building source files in pkg/mnc:" - cat make_mnc.errors 1>&2 - exit 1 - fi - if test "x$HAVE_NETCDF" != xt ; then - cat <> ad_files done done - +if test ! "x"$FS = "x.f" ; then + cat ad_files | sed -e "s/\.f/.$FS/g" > ad_files_f + mv -f ad_files_f ad_files +fi echo echo "=== Creating the Makefile ===" echo " setting INCLUDES" for i in $INCLUDEDIRS ; do - if ! test -d $i ; then -# INCLUDES="$INCLUDES -I$i" -# else + if test ! -d $i ; then echo "Warning: can't find INCLUDEDIRS=\"$i\"" fi done @@ -1485,12 +1881,14 @@ ;; ./FC_NAMEMANGLE.h) ;; + ./BUILD_INFO.h) + ;; *) touch .links.tmp/$sf deplist="$deplist $sf" ;; esac - extn=`echo $sf | $AWK -F '.' '{print $NF}'` + extn=`echo $sf | $AWK -F. '{print $NF}'` case $extn in F) echo " \\" >> srclist.inc @@ -1530,7 +1928,7 @@ echo "" >> hlist.inc echo "" >> ad_flow_files.inc -if test -e $MAKEFILE ; then +if test -f $MAKEFILE ; then mv -f $MAKEFILE "$MAKEFILE.bak" fi echo " Writing makefile: $MAKEFILE" @@ -1541,7 +1939,7 @@ echo "# by the command:" >> $MAKEFILE echo "# $0 $G2ARGS" >> $MAKEFILE echo "# executed by:" >> $MAKEFILE -echo "# $USER@${THISHOSTNAME}:${THISCWD}" >> $MAKEFILE +echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE EXE_AD=$EXECUTABLE"_ad" EXE_FTL=$EXECUTABLE"_ftl" @@ -1587,7 +1985,7 @@ DISABLED_PACKAGES = ${DISABLED_PACKAGES} # These files are created by Makefile -SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h +SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h EOF @@ -1606,6 +2004,8 @@ FC = ${FC} # Fortran compiler F90C = ${F90C} +# C compiler +CC = ${CC} # Link editor LINK = ${LINK} ${LDADD} @@ -1628,7 +2028,7 @@ NOOPTFILES = ${NOOPTFILES} NOOPTFLAGS = ${NOOPTFLAGS} # Flags and libraries needed for linking -LIBS = ${LIBS} \$(XLIBS) +LIBS = ${LIBS} # Name of the Mekfile MAKEFILE=${MAKEFILE} @@ -1639,26 +2039,25 @@ cat f90srclist.inc >> $MAKEFILE cat hlist.inc >> $MAKEFILE cat ad_flow_files.inc >> $MAKEFILE -echo >> $MAKEFILE -echo 'F77FILES = $(SRCFILES:.F=.f)' >> $MAKEFILE -echo 'F90FILES = $(F90SRCFILES:.F90=.f90)' >> $MAKEFILE +echo >> $MAKEFILE +echo 'F77FILES = $(SRCFILES:.F=.'$FS')' >> $MAKEFILE +echo 'F90FILES = $(F90SRCFILES:.F90=.'$FS90')' >> $MAKEFILE echo 'OBJFILES = $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE - +echo >> $MAKEFILE +echo '.SUFFIXES:' >> $MAKEFILE +echo '.SUFFIXES: .o .'$FS' .p .F .c .'$FS90' .F90' >> $MAKEFILE rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc rm -f ad_flow_files.inc cat >>$MAKEFILE <> \$(MAKEFILE) -rm -f makedepend.out @@ -1671,7 +2070,7 @@ @\$(EXECUTABLE) > \$@ clean: - -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl} *.template + -rm -rf *.o *.$FS *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template Clean: @make clean @make cleanlinks @@ -1682,7 +2081,7 @@ -find \$(EXEDIR) -name "*.meta" -exec rm {} \; -find \$(EXEDIR) -name "*.data" -exec rm {} \; -find \$(EXEDIR) -name "fort.*" -exec rm {} \; - -rm -f \$(EXECUTABLE) output.txt + -rm -f \$(EXECUTABLE) output.txt STD* #eh3 Makefile: makefile makefile: @@ -1690,7 +2089,7 @@ cleanlinks: -find . -type l -exec rm {} \; -# Special targets ($SPECIAL_FILES) which are create by make +# Special targets (SPECIAL_FILES) which are create by make ${PACKAGES_DOT_H}: @echo Creating \$@ ... @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@ @@ -1701,22 +2100,37 @@ @echo Creating \$@ ... echo "$FC_NAMEMANGLE" > \$@ -# The normal chain of rules is ( .F - .f - .o ) -.F.f: +BUILD_INFO.h: + @echo Creating \$@ ... +EOF + +test ! "x$THISVER" = x && echo " -echo \"#define THISVER '$THISVER'\" > \$@" >> $MAKEFILE +test ! "x$THISUSER" = x && echo " -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE +test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE +test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE + +cat >>$MAKEFILE < \$@ -.f.o: +.$FS.o: \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$< -.F90.f90: +.F90.$FS90: \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ -.f90.o: +.$FS90.o: \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$< .c.o: \$(CC) \$(CFLAGS) -c \$< -# Special exceptions that use the ( .F - .p - .f - .o ) rule-chain +# Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain .F.p: \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ -.p.f: +.p.$FS: \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$< #========================================= @@ -1756,75 +2170,96 @@ # ... AD ... adall: ad_taf -adtaf: ad_taf_output.f -adtamc: ad_tamc_output.f +adtaf: ad_taf_output.$FS +adtamc: ad_tamc_output.$FS -ad_input_code.f: \$(AD_FILES) \$(HEADERFILES) +ad_input_code.$FS: \$(AD_FILES) \$(HEADERFILES) @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h -rm -f ad_config.template @make \$(F77FILES) @make \$(AD_FLOW_FILES) - cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f + cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.$FS -ad_taf_output.f: ad_input_code.f - \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f - cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f +ad_taf_output.$FS: ad_input_code.$FS + \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS + cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS adtafonly: - \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f - cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f + \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS + cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS ad_taf: ad_taf_output.o \$(OBJFILES) \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS) -ad_tamc_output.f: ad_input_code.f - \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.f - cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.f +ad_tamc_output.$FS: ad_input_code.$FS + \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS + cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS ad_tamc: ad_tamc_output.o \$(OBJFILES) \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS) +adonlyfwd: + patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff + +adtrick: + patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff # ... FTL ... ftlall: ftl_taf -ftltaf: ftl_taf_output.f -ftltamc: ftl_tamc_output.f +ftltaf: ftl_taf_output.$FS +ftltamc: ftl_tamc_output.$FS -ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES) +ftl_input_code.$FS: \$(AD_FILES) \$(HEADERFILES) @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h -rm -f ftl_config.template @make \$(F77FILES) @make \$(AD_FLOW_FILES) - cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.f + cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS -ftl_taf_output.f: ftl_input_code.f - \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f - cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f +ftl_taf_output.$FS: ftl_input_code.$FS + \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS + cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS ftltafonly: - \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f - cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f + \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS + cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS ftl_taf: ftl_taf_output.o \$(OBJFILES) \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS) -ftl_tamc_output.f: ftl_input_code.f - \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.f - cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.f +ftl_tamc_output.$FS: ftl_input_code.$FS + \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS + cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS ftl_tamc: ftl_tamc_output.o \$(OBJFILES) \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS) # ... SVD ... -svdtaf: ad_taf_output.f ftl_taf_output.f -svdall: svd_taf +svdtaf: ad_taf_output.$FS ftl_taf_output.$FS + @echo "--->>> Only ran TAF to generate SVD code! <<<---" + @echo "--->>> Do make svdall afterwards to compile. <<<---" +svdall: svd_touch svd_taf -svd_taf: ad_taf_output.o ftl_taf_output.o \$(OBJFILES) +svd_taf: \$(OBJFILES) \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS) + @echo "--->>> Only COMPILE svd code! <<<---" + @echo "--->>> Assumes you previously <<<---" + @echo "--->>> did make svdtaf <<<---" + +svd_touch: + @echo "--->>> Only COMPILE svd code! <<<---" + @echo "--->>> Assumes you previously <<<---" + @echo "--->>> did make svdtaf <<<---" + touch ad_taf_output.$FS ftl_taf_output.$FS + \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS + \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS + @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template + cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h + -rm -f ftl_config.template #========================================= @@ -1841,7 +2276,7 @@ if test "x$RETVAL" != x0 ; then echo "Error: unable to add file \"$i\" to the exceptions list" fi - echo "$base.f: $base.p" >> $MAKEFILE + echo "$base.$FS: $base.p" >> $MAKEFILE done echo " Making list of NOOPTFILES" @@ -1851,7 +2286,7 @@ if test "x$RETVAL" != x0 ; then echo "Error: unable to add file \"$i\" to the exceptions list" fi - echo "$base.o: $base.f" >> $MAKEFILE + echo "$base.o: $base.$FS" >> $MAKEFILE printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE done