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revision 1.36 by edhill, Fri Nov 14 02:48:18 2003 UTC revision 1.69 by edhill, Wed Feb 25 19:12:10 2004 UTC
# Line 1  Line 1 
1  #!/bin/sh  #! /usr/bin/env bash
2  #  #
3  # $Header$  # $Header$
4  #  #
# Line 13  Line 13 
13  test_for_package_in_cpp_options() {  test_for_package_in_cpp_options() {
14      cpp_options=$1      cpp_options=$1
15      pkg=$2      pkg=$2
16      grep -i "#define.*ALLOW_$pkg" $cpp_options > /dev/null 2>&1      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg" || exit 99
17      RETVAL=$?      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg" || exit 99
18      if test "x${RETVAL}" = x0 ; then      test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg" || exit 99
19          echo "Error: In $cpp_options there is an illegal line: #define ALLOW_$pkg"      test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg" || exit 99
20          exit 99  }
21      fi  
22      grep -i "#undef.*ALLOW_$pkg" $cpp_options > /dev/null 2>&1  # Search for particular CPP #cmds associated with MPI
23      RETVAL=$?  # usage: test_for_mpi_in_cpp_eeoptions CPP_file
24      if test "x${RETVAL}" = x0 ; then  test_for_mpi_in_cpp_eeoptions() {
25          echo "Error: In $cpp_options there is an illegal line: #undef ALLOW_$pkg"      cpp_options=$1
26          exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI" || exit 99
27      fi      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI" || exit 99
28      grep -i "#define.*DISABLE_$pkg" $cpp_options > /dev/null 2>&1      test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI" || exit 99
29        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI" || exit 99
30    }
31    
32    # Search for particular string in a file. Return 1 if detected, 0 if not
33    # usage: test_for_string_in_file file string
34    test_for_string_in_file() {
35        file=$1
36        strng=$2
37        grep -i "$strng" $file > /dev/null 2>&1
38      RETVAL=$?      RETVAL=$?
39      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
40          echo "Error: In $cpp_options there is an illegal line: #define DISABLE_$pkg"          echo -n "Error: In $file there is an illegal line: "
41          exit 99          grep -i "$strng" $file
42            return 1
43      fi      fi
44      grep -i "#undef.*DISABLE_$pkg" $cpp_options > /dev/null 2>&1      return 0
     RETVAL=$?  
     if test "x${RETVAL}" = x0 ; then  
         echo "Error: In $cpp_options there is an illegal line: #undef DISABLE_$pkg"  
         exit 99  
    fi  
45  }  }
46    
47  # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to  # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to
# Line 73  find_possible_configs()  { Line 78  find_possible_configs()  {
78      tmp1=`uname`"_"`uname -m`      tmp1=`uname`"_"`uname -m`
79      tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`      tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
80      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
81      PLATFORM=`echo $tmp3 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`      tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
82        tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
83        PLATFORM=$tmp2
84      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
85      echo "  The platform appears to be:  $PLATFORM"      echo "  The platform appears to be:  $PLATFORM"
 #     if test "x$OFLIST" = x ; then  
 #       echo "  No pre-defined options files were found matching this platform"  
 #       echo "  but examples for other platforms can be found in:"  
 #       echo "    $ROOTDIR/tools/build_options"  
 #     else  
 #       echo "  Options files (located in $ROOTDIR/tools/build_options) that"  
 #       echo "  may work with this machine are:"  
 #       for i in $OFLIST ; do  
 #           echo "    $i"  
 #       done  
 #     fi  
86            
87      echo "test" > test      echo "test" > test
88      ln -s ./test link      ln -s ./test link
# Line 104  find_possible_configs()  { Line 100  find_possible_configs()  {
100          CPP="cpp -traditional -P"          CPP="cpp -traditional -P"
101      fi      fi
102    
103      # makedepend is not always available      #  The "original" makedepend is part of the Imake system that is
104        #  most often distributed with XFree86 or with an XFree86 source
105        #  package.  As a result, many machines (eg. generic Linux) do not
106        #  have a system-default "makedepend" available.  For those
107        #  systems, we have two fall-back options:
108        #
109        #    1) a makedepend implementation shipped with the cyrus-imapd
110        #       package:  ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
111        #
112        #    2) a known-buggy xmakedpend shell script
113        #
114        #  So the choices are, in order:
115        #
116        #    1) use the user-specified program
117        #    2) use a system-wide default
118        #    3) locally build and use the cyrus implementation
119        #    4) fall back to the buggy local xmakedpend script
120        #
121      if test "x${MAKEDEPEND}" = x ; then      if test "x${MAKEDEPEND}" = x ; then
122        which makedepend >& /dev/null        which makedepend >& /dev/null
123        RETVAL=$?        RETVAL=$?
124        if test "x${RETVAL}" = x1 ; then        if test ! "x${RETVAL}" = x0 ; then
125           echo "    makedepend was not found. Using xmakedpend instead."           echo "    a system-default makedepend was not found."
126           MAKEDEPEND='$(TOOLSDIR)/xmakedepend'  
127             #  Try to build the cyrus impl
128             rm -f ./genmake_cy_md
129             (
130                 cd $ROOTDIR/tools/cyrus-imapd-makedepend  \
131                     &&  ./configure > /dev/null 2>&1  \
132                     &&  make > /dev/null 2>&1  \
133                     &&  ./makedepend ifparser.c > /dev/null 2>&1  \
134                     &&  echo "true"
135             ) > ./genmake_cy_md
136             grep true ./genmake_cy_md > /dev/null 2>&1
137             RETVAL=$?
138             if test "x$RETVAL" = x0 ; then
139                 MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
140             else
141                 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
142             fi
143             rm -f ./genmake_cy_md
144        fi        fi
145      fi      fi
146    
# Line 149  EOF Line 179  EOF
179          echo "   "$p_FC          echo "   "$p_FC
180          if test "x$FC" = x ; then          if test "x$FC" = x ; then
181              FC=`echo $p_FC | $AWK '{print $1}'`              FC=`echo $p_FC | $AWK '{print $1}'`
182                echo "  Setting FORTRAN compiler to: "$FC
183          fi          fi
184      fi      fi
185    
186      for i in $p_FC ; do      if test "x$OPTFILE" = x ; then
187          p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i          OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
188          if test -r $p_OF ; then          if test ! -r $OPTFILE ; then
189              OPTFILE=$p_OF               echo "  I looked for the file "$OPTFILE" but did not find it"
190              echo "  The options file:  $p_OF"          fi
191              echo "    appears to match so we'll use it."      fi
192              break  #    echo "  The options file:  $p_OF"
193          fi  #    echo "    appears to match so we'll use it."
194      done  #   for i in $p_FC ; do
195    #p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
196    #if test -r $p_OF ; then
197    #    OPTFILE=$p_OF
198    #    echo "  The options file:  $p_OF"
199    #    echo "    appears to match so we'll use it."
200    #    break
201    #fi
202    #   done
203      if test "x$OPTFILE" = x ; then      if test "x$OPTFILE" = x ; then
204          cat 1>&2 <<EOF          cat 1>&2 <<EOF
205    
# Line 225  get_pdepend_list()  { Line 264  get_pdepend_list()  {
264    
265  #  Explain usage  #  Explain usage
266  usage()  {  usage()  {
267      echo  cat <<EOF
268      echo "Usage: "$0" [OPTIONS]"  
269      echo "  where [OPTIONS] can be:"  Usage: "$0" [OPTIONS]
270      echo    where [OPTIONS] can be:
271      echo "    -help | --help | -h | --h"  
272      echo "    -nooptfile | --nooptfile"      -help | --help | -h | --h
273      echo "      -optfile NAME | --optfile NAME | -of NAME | --of NAME"            Print this help message and exit.
274      echo "      -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME"  
275      echo "    -pdepend NAME | --pdepend NAME"      -nooptfile | --nooptfile
276      echo "      -pdepend=NAME | --pdepend=NAME"        -optfile NAME | --optfile NAME | -of NAME | --of NAME
277      echo "    -pdefault NAME | --pdefault NAME"        -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
278      echo "      -pdefault=NAME | --pdefault=NAME"            Use "NAME" as the optfile.  By default, an attempt will be
279      echo "    -make NAME | -m NAME"            made to find an appropriate "standard" optfile in the
280      echo "      --make=NAME | -m=NAME"            tools/build_options/ directory.
281      echo "    -makefile NAME | -mf NAME"  
282      echo "      --makefile=NAME | -mf=NAME"      -pdepend NAME | --pdepend NAME
283      echo "    -platform NAME | --platform NAME | -pl NAME | --pl NAME"        -pdepend=NAME | --pdepend=NAME
284      echo "      -platform=NAME | --platform=NAME | -pl=NAME | --pl=NAME"            Get package dependency information from "NAME".
285      echo "    -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME"  
286      echo "      -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME"      -pdefault NAME | --pdefault NAME
287      echo "    -mods NAME | --mods NAME | -mo NAME | --mo NAME"        -pdefault=NAME | --pdefault=NAME
288      echo "      -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME"            Get the default package list from "NAME".
289      echo "    -disable NAME | --disable NAME"  
290      echo "      -disable=NAME | --disable=NAME"      -make NAME | -m NAME
291      echo "    -enable NAME | --enable NAME"        --make=NAME | -m=NAME
292      echo "      -enable=NAME | --enable=NAME"            Use "NAME" for the MAKE program. The default is "make" but
293      echo "    -standarddirs NAME | --standarddirs NAME"            many platforms, "gmake" is the preferred choice.
294      echo "      -standarddirs=NAME | --standarddirs=NAME"  
295      echo "    -noopt NAME | --noopt NAME"      -makefile NAME | -mf NAME
296      echo "      -noopt=NAME | --noopt=NAME"        --makefile=NAME | -mf=NAME
297  #    echo "    -cpp NAME | --cpp NAME"            Call the makefile "NAME".  The default is "Makefile".
298  #    echo "      -cpp=NAME | --cpp=NAME"  
299      echo "    -fortran NAME | --fortran NAME | -fc NAME | --fc NAME"      -makedepend NAME | -md NAME
300      echo "      -fc=NAME | --fc=NAME"        --makedepend=NAME | -md=NAME
301      echo "    -[no]ieee | --[no]ieee"            Use "NAME" for the MAKEDEPEND program.
302      echo "    -[no]mpi | --[no]mpi"  
303      echo "    -[no]jam | --[no]jam"      -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
304      echo        -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
305      echo "  and NAME is a string such as:"            Specify the location of the MITgcm ROOTDIR as "NAME".
306      echo            By default, genamke will try to find the location by
307      echo "    --enable pkg1   --enable 'pkg1 pkg2'   --enable 'pkg1 pkg2 pkg3'"            looking in parent directories (up to the 5th parent).
308      echo "    -mods=dir1   -mods='dir1'   -mods='dir1 dir2 dir3'"  
309      echo "    -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'"      -mods NAME | --mods NAME | -mo NAME | --mo NAME
310      echo        -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME
311      echo "  which, depending upon your shell, may need to be single-quoted"            Here, "NAME" specifies a list of directories that are
312      echo "  if it contains spaces, dashes, or other special characters."            used for additional source code.  Files found in the
313              "mods list" are given preference over files of the same
314              name found elsewhere.
315    
316        -disable NAME | --disable NAME
317          -disable=NAME | --disable=NAME
318              Here "NAME" specifies a list of packages that we don't
319              want to use.  If this violates package dependencies,
320              genamke will exit with an error message.
321    
322        -enable NAME | --enable NAME
323          -enable=NAME | --enable=NAME
324              Here "NAME" specifies a list of packages that we wish
325              to specifically enable.  If this violates package
326              dependencies, genamke will exit with an error message.
327    
328        -standarddirs NAME | --standarddirs NAME
329          -standarddirs=NAME | --standarddirs=NAME
330              Here, "NAME" specifies a list of directories to be
331              used as the "standard" code.
332    
333        -fortran NAME | --fortran NAME | -fc NAME | --fc NAME
334          -fc=NAME | --fc=NAME
335              Use "NAME" as the fortran compiler.  By default, genmake
336              will search for a working compiler by trying a list of
337              "usual suspects" such as g77, f77, etc.
338    
339        -[no]ieee | --[no]ieee
340              Do or don't use IEEE numerics.  Note that this option
341              *only* works if it is supported by the OPTFILE that
342              is being used.
343    
344        -mpi | --mpi
345              Include MPI header files and link to MPI libraries
346        -mpi=PATH | --mpi=PATH
347              Include MPI header files and link to MPI libraries using MPI_ROOT
348              set to PATH. i.e. Include files from $PATH/include, link to libraries
349              from $PATH/lib and use binaries from $PATH/bin.
350    
351      While it is most often a single word, the "NAME" variables specified
352      above can in many cases be a space-delimited string such as:
353    
354        --enable pkg1   --enable 'pkg1 pkg2'   --enable 'pkg1 pkg2 pkg3'
355        -mods=dir1   -mods='dir1'   -mods='dir1 dir2 dir3'
356        -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'
357    
358      which, depending upon your shell, may need to be single-quoted.
359    
360      For more detailed genmake documentation, please see:
361    
362        http://mitgcm.org/devel_HOWTO/
363    
364    EOF
365    
366      exit 1      exit 1
367  }  }
368    
# Line 281  get_fortran_c_namemangling()  { Line 373  get_fortran_c_namemangling()  {
373      cat > genmake_test.c <<EOF      cat > genmake_test.c <<EOF
374  void tcall( char * string ) { tsub( string ); }  void tcall( char * string ) { tsub( string ); }
375  EOF  EOF
376      $MAKE genmake_test.o > genmake_test.log 2>&1      $MAKE genmake_test.o >> genmake_warnings 2>&1
377      RETVAL=$?      RETVAL=$?
378      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
         cat genmake_test.log >> genmake_errors  
379          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
380          echo          cat <<EOF>> genmake_errors
381          echo "WARNING: C test compile fails -- please see \"genmake_errors\""  
382          echo "WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'"  WARNING: C test compile fails
383          echo "WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here."  WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
384    WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
385    EOF
386          return 1          return 1
387      fi      fi
388      c_tcall=`nm genmake_test.o | grep tcall | cut -d ' ' -f 3`      c_tcall=`nm genmake_test.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`
389      RETVAL=$?      RETVAL=$?
390      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
391          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
392          echo          cat <<EOF>> genmake_warnings
393          echo "WARNING: The \"nm\" command failed."  
394          echo "WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'"  WARNING: The "nm" command failed.
395          echo "WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here."  WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
396    WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
397    EOF
398          return 1          return 1
399      fi      fi
400      cat > genmake_tcomp.f <<EOF      cat > genmake_tcomp.f <<EOF
# Line 308  EOF Line 403  EOF
403        call tsub( string )        call tsub( string )
404        end        end
405  EOF  EOF
406      $FC $FFLAGS $DEFINES -c genmake_tcomp.f > genmake_tcomp.log 2>&1      $FC $FFLAGS $DEFINES -c genmake_tcomp.f >> genmake_warnings 2>&1
407      RETVAL=$?      RETVAL=$?
408      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
         cat genmake_tcomp.log >> genmake_errors  
409          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
410          echo          cat <<EOF>> genmake_warnings
411          echo "WARNING: FORTRAN test compile fails -- please see \"genmake_errors\""  
412          echo "WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'"  WARNING: FORTRAN test compile fails -- please see "genmake_errors"
413          echo "WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here."  WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
414    WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
415    EOF
416          return 1          return 1
417      fi      fi
418      f_tcall=`nm genmake_tcomp.o | grep tcall | cut -d ' ' -f 3`      f_tcall=`nm genmake_tcomp.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`
419      RETVAL=$?      RETVAL=$?
420      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
421          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
422          echo          cat <<EOF>> genmake_warnings
423          echo "WARNING: The \"nm\" command failed."  
424          echo "WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'"  WARNING: The "nm" command failed.
425          echo "WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here."  WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
426    WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
427    EOF
428          return 1          return 1
429      fi      fi
430    
# Line 353  EOF Line 451  EOF
451      rm -f genmake_tcomp.* genmake_test.*      rm -f genmake_tcomp.* genmake_test.*
452  }  }
453    
454    
455    check_HAVE_CLOC()  {
456        get_fortran_c_namemangling
457        cat <<EOF > genmake_tc_1.c
458    $FC_NAMEMANGLE
459    #include <stdio.h>
460    #include <stdlib.h>
461    #include <unistd.h>
462    #include <assert.h>
463    #include <sys/time.h>
464    void FC_NAMEMANGLE(cloc) ( double *curtim )
465    {
466     struct timeval tv1;
467     gettimeofday(&tv1 , (void *)NULL );
468     *curtim =  (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6);
469     *curtim = *curtim/1.E6;
470    }
471    EOF
472        make genmake_tc_1.o >> genmake_tc.log 2>&1
473        RET_C=$?
474        cat <<EOF > genmake_tc_2.f
475          program hello
476          Real*8 wtime
477          external cloc
478          call cloc(wtime)
479          print *," HELLO WORLD", wtime
480          end program hello
481    EOF
482        $FC $FFLAGS -o genmake_tc genmake_tc_2.f genmake_tc_1.o >> genmake_tc.log 2>&1
483        RET_F=$?
484        test -x ./genmake_tc  &&  ./genmake_tc >> genmake_tc.log 2>&1
485        RETVAL=$?
486        if test "x$RETVAL" = x0 ; then
487            HAVE_CLOC=t
488            DEFINES="$DEFINES -DHAVE_CLOC"
489        fi
490        rm -f genmake_tc*
491    }
492    
493    
494    check_netcdf_libs()  {
495        cat <<EOF > genmake_tnc.F
496          program fgennc
497    #include "netcdf.inc"
498          integer iret, ncid, xid
499          iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
500          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
501          iret = nf_def_dim(ncid, 'X', 11, xid)
502          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
503          iret = nf_close(ncid)
504          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
505          end
506    EOF
507        $CPP genmake_tnc.F > genmake_tnc.f  \
508            &&  $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f $LIBS >> genmake_tnc.log 2>&1
509        RET_COMPILE=$?
510        test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1
511        RETVAL=$?
512        if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
513            HAVE_NETCDF=t
514        else
515            # try again with "-lnetcdf" added to the libs
516            $CPP genmake_tnc.F > genmake_tnc.f  \
517                &&  $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f \
518                $LIBS -lnetcdf >> genmake_tnc_2.log 2>&1
519            RET_COMPILE=$?
520            test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1
521            RETVAL=$?
522            if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
523                LIBS="$LIBS -lnetcdf"
524                HAVE_NETCDF=t
525            else
526                cat genmake_tnc.log >> genmake_warnings
527            fi
528        fi
529        rm -f genmake_tnc*
530    }
531    
532    
533    
534    ###############################################################################
535    #   Sequential part of script starts here
536    ###############################################################################
537    
538  #  Set defaults here  #  Set defaults here
539  COMMANDL="$0 $@"  COMMANDL="$0 $@"
540    
# Line 361  LN= Line 543  LN=
543  S64=  S64=
544  KPP=  KPP=
545  FC=  FC=
546    CPP=
547  LINK=  LINK=
 # DEFINES="-DWORDLENGTH=4"  
548  DEFINES=  DEFINES=
549  PACKAGES=  PACKAGES=
550  ENABLE=  ENABLE=
# Line 383  LIBS= Line 565  LIBS=
565  KPPFILES=  KPPFILES=
566  NOOPTFILES=  NOOPTFILES=
567  NOOPTFLAGS=  NOOPTFLAGS=
568    MPI=
569    MPIPATH=
570    
571  # DEFINES checked by test compilation  # DEFINES checked by test compilation
572  HAVE_SYSTEM=  HAVE_SYSTEM=
573  HAVE_FDATE=  HAVE_FDATE=
574  FC_NAMEMANGLE=  FC_NAMEMANGLE=
575    HAVE_CLOC=
576    HAVE_NETCDF=
577    
578  MODS=  MODS=
579  TOOLSDIR=  TOOLSDIR=
580  SOURCEDIRS=  SOURCEDIRS=
581  INCLUDEDIRS=  INCLUDEDIRS=
582  STANDARDDIRS=  STANDARDDIRS="USE_THE_DEFAULT"
583    
584  PWD=`pwd`  PWD=`pwd`
585  MAKE=make  MAKE=make
# Line 426  TAMC_EXTRA= Line 612  TAMC_EXTRA=
612    
613    
614  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
615  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE NOOPT"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
616  gm_s2="FC IEEE MPI JAM DUMPSTATE STANDARDDIRS"  gm_s2="FC CPP IEEE MPI JAM DUMPSTATE STANDARDDIRS"
617    
618  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
619  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
# Line 444  gm_s12="TAF_EXTRA TAMC_EXTRA" Line 630  gm_s12="TAF_EXTRA TAMC_EXTRA"
630  gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7"  gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7"
631  gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"  gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"
632    
633    cat <<EOF
634    
635    GENMAKE :
636    
637    A program for GENerating MAKEfiles for the MITgcm project.  For a
638    quick list of options, use "genmake -h" or for more detail see:
639    
640      http://mitgcm.org/devel_HOWTO/
641    
642    EOF
643    
 echo  
644  echo "===  Processing options files and arguments  ==="  echo "===  Processing options files and arguments  ==="
645  gm_local="genmake_local"  gm_local="genmake_local"
646  for i in . $MODS ; do  for i in . $MODS ; do
# Line 499  for ac_option ; do Line 694  for ac_option ; do
694          -optfile=* | --optfile=* | -of=* | --of=*)          -optfile=* | --optfile=* | -of=* | --of=*)
695              OPTFILE=$ac_optarg ;;              OPTFILE=$ac_optarg ;;
696                    
697          -adoptfile | --adoptfile | -ad | --ad)          -adoptfile | --adoptfile | -adof | --adof)
698              ac_prev=AD_OPTFILE ;;              ac_prev=AD_OPTFILE ;;
699          -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)          -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
700              AD_OPTFILE=$ac_optarg ;;              AD_OPTFILE=$ac_optarg ;;
# Line 519  for ac_option ; do Line 714  for ac_option ; do
714          -make=* | --make=* | -m=* | --m=*)          -make=* | --make=* | -m=* | --m=*)
715              MAKE=$ac_optarg ;;              MAKE=$ac_optarg ;;
716                    
717            -makedepend | --makedepend | -md | --md)
718                ac_prev=MAKEDEPEND ;;
719            -makedepend=* | --makedepend=* | -md=* | --md=*)
720                MAKEDEPEND=$ac_optarg ;;
721            
722          -makefile | --makefile | -ma | --ma)          -makefile | --makefile | -ma | --ma)
723              ac_prev=MAKEFILE ;;              ac_prev=MAKEFILE ;;
724          -makefile=* | --makefile=* | -ma=* | --ma=*)          -makefile=* | --makefile=* | -ma=* | --ma=*)
725              MAKEFILE=$ac_optarg ;;              MAKEFILE=$ac_optarg ;;
726                    
727          -platform | --platform | -pl | --pl)          -platform | --platform | -pl | --pl | -platform=* | --platform=* | -pl=* | --pl=*)
728              ac_prev=PLATFORM ;;              echo "ERROR: The platform option has been removed.  Please specify"
729          -platform=* | --platform=* | -pl=* | --pl=*)              echo "  the build options using the \"optfile\" mechanism."
730              PLATFORM=$ac_optarg ;;              echo
731                usage
732                ;;
733                    
734          -rootdir | --rootdir | -rd | --rd)          -rootdir | --rootdir | -rd | --rd)
735              ac_prev=ROOTDIR ;;              ac_prev=ROOTDIR ;;
# Line 554  for ac_option ; do Line 756  for ac_option ; do
756          -standarddirs=* | --standarddirs=*)          -standarddirs=* | --standarddirs=*)
757              STANDARDDIRS=$ac_optarg ;;              STANDARDDIRS=$ac_optarg ;;
758    
         -noopt | --noopt)  
             ac_prev=NOOPT ;;  
         -noopt=* | --noopt=*)  
             NOOPT=$ac_optarg ;;  
           
759  #           -cpp | --cpp)  #           -cpp | --cpp)
760  #               ac_prev=cpp ;;  #               ac_prev=cpp ;;
761  #           -cpp=* | --cpp=*)  #           -cpp=* | --cpp=*)
# Line 573  for ac_option ; do Line 770  for ac_option ; do
770              IEEE=true ;;              IEEE=true ;;
771          -noieee | --noieee)          -noieee | --noieee)
772              IEEE= ;;              IEEE= ;;
773            
774          -mpi | --mpi)          -mpi | --mpi)
775              MPI=true ;;              MPI=true ;;
776          -nompi | --nompi)          -mpi=* | --mpi=*)
777              MPI= ;;              MPIPATH=$ac_optarg
778                MPI=true ;;
779                    
780          -jam | --jam)  #       -jam | --jam)
781              JAM=1 ;;  #           JAM=1 ;;
782          -nojam | --nojam)  #       -nojam | --nojam)
783              JAM=0 ;;  #           JAM=0 ;;
784                    
785          -ds | --ds)          -ds | --ds)
786              DUMPSTATE=t ;;              DUMPSTATE=t ;;
# Line 704  if test "x${AD_OPTFILE}" != xNONE ; then Line 902  if test "x${AD_OPTFILE}" != xNONE ; then
902      fi      fi
903  fi  fi
904    
905  #  Check that FC, LINK, CPP, S64, and LN are defined.  If not,  #  Check that FC, LINK, CPP, S64, LN, and MAKE are defined.  If not,
906  #  complain and abort!  #  either set defaults or complain and abort!
907  if test "x$FC" = x ; then  if test "x$FC" = x ; then
908      cat <<EOF 1>&2      cat <<EOF 1>&2
909    
# Line 719  fi Line 917  fi
917  if test "x$LINK" = x ; then  if test "x$LINK" = x ; then
918      LINK=$FC      LINK=$FC
919  fi  fi
920    if test "x$MAKE" = x ; then
921        MAKE="make"
922    fi
923  if test "x$CPP" = x ; then  if test "x$CPP" = x ; then
924      CPP="cpp"      CPP=cpp
925  fi  fi
926    #EH3 === UGLY ===
927    #  The following an ugly little hack to check for $CPP in /lib/ and it
928    #  should eventually be replaced with a more general function that
929    #  searches a combo of the user's path and a list of "usual suspects"
930    #  to find the correct location for binaries such as $CPP.
931    for i in " " "/lib/" ; do
932        echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
933    done
934    #EH3 === UGLY ===
935  echo "#define A a" | $CPP > test_cpp 2>&1  echo "#define A a" | $CPP > test_cpp 2>&1
936  RETVAL=$?  RETVAL=$?
937  if test "x$RETVAL" != x0 ; then  if test "x$RETVAL" != x0 ; then
# Line 758  EOF Line 968  EOF
968  fi  fi
969  rm -f genmake_test_ln genmake_tlink  rm -f genmake_test_ln genmake_tlink
970    
971    if test ! "x$MPI" = x ; then
972          echo "  Turning on MPI cpp macros"
973          DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
974    fi
975    
976  printf "\n===  Checking system libraries  ===\n"  printf "\n===  Checking system libraries  ===\n"
977  echo -n "  Do we have the system() command using $FC...  "  echo -n "  Do we have the system() command using $FC...  "
978  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.f <<EOF
# Line 798  else Line 1013  else
1013  fi  fi
1014  rm -f genmake_tcomp*  rm -f genmake_tcomp*
1015    
1016  echo "  The name mangling convention for $FC is...  "  echo -n "  Can we call simple C routines (here, \"cloc()\") using $FC...  "
1017  #FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) X ## _"  check_HAVE_CLOC
1018  if test "x$FC_NAMEMANGLE" = x ; then  if test "x$HAVE_CLOC" != x ; then
1019      get_fortran_c_namemangling      echo "yes"
1020    else
1021        echo "no"
1022  fi  fi
1023  echo "    '$FC_NAMEMANGLE'"  rm -f genmake_t*
1024  echo "$FC_NAMEMANGLE" > FC_NAMEMANGLE.h.template  
1025  cmp FC_NAMEMANGLE.h FC_NAMEMANGLE.h.template > /dev/null 2>&1  echo -n "  Can we create NetCDF-enabled binaries...  "
1026  RETVAL=$?  check_netcdf_libs
1027  if test "x$RETVAL" != x0 ; then  if test "x$HAVE_NETCDF" != x ; then
1028      mv -f FC_NAMEMANGLE.h.template FC_NAMEMANGLE.h      echo "yes"
1029    else
1030        echo "no"
1031  fi  fi
1032    
1033    
# Line 850  if test "x${TOOLSDIR}" = x ; then Line 1069  if test "x${TOOLSDIR}" = x ; then
1069      TOOLSDIR="$ROOTDIR/tools"      TOOLSDIR="$ROOTDIR/tools"
1070  fi  fi
1071  if test ! -d ${TOOLSDIR} ; then  if test ! -d ${TOOLSDIR} ; then
1072      echo "Error: the specified $TOOLSDIR (\"$TOOLSDIR\") does not exist!"      echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1073      exit 1      exit 1
1074  fi  fi
1075  if test "x$S64" = x ; then  if test "x$S64" = x ; then
1076      S64='$(TOOLSDIR)/set64bitConst.sh'      S64='$(TOOLSDIR)/set64bitConst.sh'
1077  fi  fi
1078    THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1079    
1080  EXECUTABLE=${EXECUTABLE:-mitgcmuv}  EXECUTABLE=${EXECUTABLE:-mitgcmuv}
1081    
# Line 870  if test -r $ROOTDIR"/eesupp/src/Makefile Line 1090  if test -r $ROOTDIR"/eesupp/src/Makefile
1090          rm -f make_eesupp.errors          rm -f make_eesupp.errors
1091      else      else
1092          echo "Error: problem encountered while building source files in eesupp:"          echo "Error: problem encountered while building source files in eesupp:"
1093          cat make_eesupp.errors          cat make_eesupp.errors 1>&2
1094          exit 1          exit 1
1095      fi      fi
1096  fi  fi
1097    
1098    #same for exch2
1099    if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then
1100        echo "  Making source files in exch2 from  templates"
1101        ( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1
1102        RETVAL=$?
1103        if test "x${RETVAL}" = x0 ; then
1104            rm -f make_exch2.errors
1105        else
1106            echo "Error: problem encountered while building source files in exch2:"
1107            cat make_exch2.errors 1>&2
1108            exit 1
1109        fi
1110    fi
1111    
1112  printf "\n===  Determining package settings  ===\n"  printf "\n===  Determining package settings  ===\n"
1113  if  test "x${PDEPEND}" = x ; then  if  test "x${PDEPEND}" = x ; then
1114      tmp=$ROOTDIR"/pkg/pkg_depend"      tmp=$ROOTDIR"/pkg/pkg_depend"
# Line 907  rm -f ./.pd_tmp Line 1141  rm -f ./.pd_tmp
1141  #  Search for default packages.  Note that a "$ROOTDIR/pkg/pkg_groups"  #  Search for default packages.  Note that a "$ROOTDIR/pkg/pkg_groups"
1142  #  file should eventually be added so that, for convenience, one can  #  file should eventually be added so that, for convenience, one can
1143  #  specify groups of packages using names like "ocean" and "atmosphere".  #  specify groups of packages using names like "ocean" and "atmosphere".
1144  echo  -n "  checking default package list:  "  echo "  checking default package list:  "
1145  if test "x${PDEFAULT}" = x ; then  if test "x${PDEFAULT}" = x ; then
1146      for i in "." $MODS ; do      for i in "." $MODS ; do
1147          if test -r $i"/packages.conf" ; then          if test -r $i"/packages.conf" ; then
# Line 920  if test "x${PDEFAULT}" = x ; then Line 1154  if test "x${PDEFAULT}" = x ; then
1154      PDEFAULT="$ROOTDIR/pkg/pkg_default"      PDEFAULT="$ROOTDIR/pkg/pkg_default"
1155  fi  fi
1156  if test "x${PDEFAULT}" = xNONE ; then  if test "x${PDEFAULT}" = xNONE ; then
1157      echo "default packages file disabled"      echo "    default packages file disabled"
1158  else  else
1159      if test ! -r $PDEFAULT ; then      if test ! -r $PDEFAULT ; then
         echo ""  
1160          echo "Warning:  can't read default packages from PDEFAULT=\"$PDEFAULT\""          echo "Warning:  can't read default packages from PDEFAULT=\"$PDEFAULT\""
1161      else      else
1162          echo "  using PDEFAULT=\"$PDEFAULT\""          echo "    using PDEFAULT=\"$PDEFAULT\""
1163          #  Strip the comments and add all the names          #  Strip the comments and add all the names
1164          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1165          RETVAL=$?          RETVAL=$?
# Line 1059  for i in $PACKAGES ; do Line 1292  for i in $PACKAGES ; do
1292      fi      fi
1293  done  done
1294    
1295    #  Build MNC templates and check for ability to build and use NetCDF
1296    echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1297    RETVAL=$?
1298    if test "x$RETVAL" = x0 ; then
1299        ( cd $ROOTDIR"/pkg/mnc" && $MAKE templates ) > make_mnc.errors 2>&1
1300        RETVAL=$?
1301        if test "x${RETVAL}" = x0 ; then
1302            rm -f make_mnc.errors
1303        else
1304            echo "Error: problem encountered while building source files in pkg/mnc:"
1305            cat make_mnc.errors 1>&2
1306            exit 1
1307        fi
1308        if test "x$HAVE_NETCDF" != xt ; then
1309            cat <<EOF
1310    
1311  # Create a list of #define and #undef to enable/disable packages  WARNING: the "mnc" package has been enabled but tests failed to
1312  PACKAGES_DOT_H=PACKAGES_CONFIG.h    compile and/or execute NetCDF applications.  Please check that:
 cat <<EOF >$PACKAGES_DOT_H".tmp"  
 C=== GENMAKE v2 ===  
 C  The following defines have been set by GENMAKE, so please do not  
 C  edit anything below these comments.  In general, you should  
 C  add or remove packages by re-running genmake with different  
 C  "-enable" and/or "-disable" options.  
   
 #ifndef PACKAGES_H  
 #define PACKAGES_H  
1313    
1314  C  Packages disabled by genmake:    1) NetCDF is installed for your compiler and
1315      2) the LIBS variable (within the 'optfile") specifies the correct
1316           NetCDF library to link against.
1317      
1318  EOF  EOF
1319        fi
1320    fi
1321    
1322    # Create a list of #define and #undef to enable/disable packages
1323    PACKAGES_DOT_H=PACKAGES_CONFIG.h
1324  #  The following UGLY HACK sets multiple "#undef"s and it needs to go  #  The following UGLY HACK sets multiple "#undef"s and it needs to go
1325  #  away.  On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h  #  away.  On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h
1326  #  file would eventually be split up so that all package-related #define  #  file would eventually be split up so that all package-related #define
1327  #  statements could be separated and handled only by genmake.  #  statements could be separated and handled only by genmake.
1328  names=`ls -1 "$ROOTDIR/pkg"`  names=`ls -1 "$ROOTDIR/pkg"`
1329  all_pack=  all_pack=
1330    DISABLED_PACKAGES=
1331  for n in $names ; do  for n in $names ; do
1332      if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then      if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then
1333          has_pack="f"          has_pack="f"
# Line 1091  for n in $names ; do Line 1339  for n in $names ; do
1339          done          done
1340          if test "x$has_pack" = xf ; then          if test "x$has_pack" = xf ; then
1341              undef=`echo "ALLOW_$n" | $AWK '{print toupper($0)}'`              undef=`echo "ALLOW_$n" | $AWK '{print toupper($0)}'`
1342              echo "#undef $undef" >> $PACKAGES_DOT_H".tmp"              DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
1343          fi          fi
1344      fi      fi
1345  done  done
1346  cat <<EOF >>$PACKAGES_DOT_H".tmp"  ENABLED_PACKAGES=
   
 C  Packages enabled by genmake:  
 EOF  
1347  for i in $PACKAGES ; do  for i in $PACKAGES ; do
1348      def=`echo "ALLOW_$i" | $AWK '{print toupper($0)}'`      def=`echo "ALLOW_$i" | $AWK '{print toupper($0)}'`
1349      echo "#define $def" >> $PACKAGES_DOT_H".tmp"      ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
1350  #eh3 DEFINES="$DEFINES -D$def"  #eh3 DEFINES="$DEFINES -D$def"
1351    
1352  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!
1353      case $i in      case $i in
1354          aim_v23)          aim_v23)
1355              echo "#define   ALLOW_AIM" >> $PACKAGES_DOT_H".tmp"              ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
1356              DEFINES="$DEFINES -DALLOW_AIM"              echo "Warning: ALLOW_AIM is set to enable aim_v23."
             echo "Warning: ALLOW_AIM is set to enable aim_v23. This is REALLY ugly Jean-Michel :-)"  
1357              ;;              ;;
1358      esac      esac
1359  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!
1360    
1361  done  done
 cat <<EOF >>$PACKAGES_DOT_H".tmp"  
   
 #endif /* PACKAGES_H */  
 EOF  
   
 if test ! -f $PACKAGES_DOT_H ; then  
     mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H  
 else  
     cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H  
     RETVAL=$?  
     if test "x$RETVAL" = x0 ; then  
         rm -f $PACKAGES_DOT_H".tmp"  
     else  
         mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"  
         mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H  
     fi  
 fi  
1362    
1363  echo "  Adding STANDARDDIRS"  echo "  Adding STANDARDDIRS"
1364  BUILDDIR=${BUILDDIR:-.}  BUILDDIR=${BUILDDIR:-.}
1365  if test "x$STANDARDDIRS" = x ; then  if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
1366      STANDARDDIRS="eesupp model"      STANDARDDIRS="eesupp model"
1367  fi  fi
1368  for d in $STANDARDDIRS ; do  if test "x$STANDARDDIRS" != x ; then
1369      adr="$ROOTDIR/$d/src"      for d in $STANDARDDIRS ; do
1370      if test ! -d $adr ; then          adr="$ROOTDIR/$d/src"
1371          echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""          if test ! -d $adr ; then
1372          echo "  is correct and that you correctly specified the STANDARDDIRS option"              echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
1373          exit 1              echo "  is correct and that you correctly specified the STANDARDDIRS option"
1374      else              exit 1
1375          SOURCEDIRS="$SOURCEDIRS $adr"          else
1376      fi              SOURCEDIRS="$SOURCEDIRS $adr"
1377      adr="$ROOTDIR/$d/inc"          fi
1378      if test ! -d $adr ; then          adr="$ROOTDIR/$d/inc"
1379          echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""          if test ! -d $adr ; then
1380          echo "  is correct and that you correctly specified the STANDARDDIRS option"              echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
1381          exit 1              echo "  is correct and that you correctly specified the STANDARDDIRS option"
1382      else              exit 1
1383          INCLUDEDIRS="$INCLUDEDIRS $adr"          else
1384      fi              INCLUDEDIRS="$INCLUDEDIRS $adr"
1385  done          fi
1386        done
1387    fi
1388    
1389  echo "  Searching for CPP_OPTIONS.h in order to warn about the presence"  echo "  Searching for *OPTIONS.h files in order to warn about the presence"
1390  echo "    of \"#define ALLOW_PKGNAME\"-type statements:"  echo "    of \"#define \"-type statements that are no longer allowed:"
1391  CPP_OPTIONS=  CPP_OPTIONS=
1392    CPP_EEOPTIONS=
1393  spaths=". $INCLUDEDIRS"  spaths=". $INCLUDEDIRS"
1394    names=`ls -1 "$ROOTDIR/pkg"`
1395  for i in $spaths ; do  for i in $spaths ; do
1396      try="$i/CPP_OPTIONS.h"      try="$i/CPP_OPTIONS.h"
1397      #  echo -n "    trying $try : "      if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
     if test -f $try -a -r $try ; then  
1398          echo "    found CPP_OPTIONS=\"$try\""          echo "    found CPP_OPTIONS=\"$try\""
1399          CPP_OPTIONS="$try"          CPP_OPTIONS="$try"
1400          break          # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
1401            for n in $names ; do
1402                test_for_package_in_cpp_options $CPP_OPTIONS $n
1403            done
1404        fi
1405        try="$i/CPP_EEOPTIONS.h"
1406        if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
1407            echo "    found CPP_EEOPTIONS=\"$try\""
1408            # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
1409    #**** not yet enabled ****
1410    #        test_for_mpi_in_cpp_eeoptions $try
1411    #**** not yet enabled ****
1412            CPP_EEOPTIONS="$try"
1413      fi      fi
1414  done  done
1415  if test "x$CPP_OPTIONS" = x ; then  if test "x$CPP_OPTIONS" = x ; then
1416      echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"      echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"
1417      exit 1      exit 1
1418  fi  fi
 # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h  
 names=`ls -1 "$ROOTDIR/pkg"`  
 for n in $names ; do  
     test_for_package_in_cpp_options $CPP_OPTIONS $n  
 done  
   
1419    
1420  #  Here, we build the list of files to be "run through" the adjoint  #  Here, we build the list of files to be "run through" the adjoint
1421  #  compiler.  #  compiler.
# Line 1194  for i in $SOURCEDIRS ; do Line 1430  for i in $SOURCEDIRS ; do
1430      done      done
1431  done  done
1432    
 cat <<EOF > adjoint_sed  
 s/call adopen(/call adopen ( mythid,\\  
      \&           /g  
 s/call adclose(/call adclose( mythid,\\  
      \&           /g  
 s/call adread(/call adread ( mythid,\\  
      \&           /g  
 s/call adwrite(/call adwrite( mythid,\\  
      \&           /g  
   
 EOF  
1433    
1434  echo  echo
1435  echo "===  Creating the Makefile  ==="  echo "===  Creating the Makefile  ==="
# Line 1235  for d in $alldirs ; do Line 1460  for d in $alldirs ; do
1460      for sf in $sfiles ; do      for sf in $sfiles ; do
1461          if test ! -r ".links.tmp/$sf" ; then          if test ! -r ".links.tmp/$sf" ; then
1462              if test -f "$d/$sf" ; then              if test -f "$d/$sf" ; then
1463                    case $d/$sf in
1464                      ./$PACKAGES_DOT_H)
1465                            ;;
1466                      ./AD_CONFIG.h)
1467                            ;;
1468                      ./FC_NAMEMANGLE.h)
1469                            ;;
1470                      *)
1471                            touch .links.tmp/$sf
1472                            deplist="$deplist $sf"
1473                            ;;
1474                    esac
1475                  extn=`echo $sf | $AWK -F '.' '{print $NF}'`                  extn=`echo $sf | $AWK -F '.' '{print $NF}'`
                 touch .links.tmp/$sf  
                 deplist="$deplist $sf"  
1476                  case $extn in                  case $extn in
1477                      F)                      F)
1478                          echo    " \\"  >> srclist.inc                          echo    " \\"  >> srclist.inc
# Line 1295  EXE_FTL=$EXECUTABLE"_ftl" Line 1530  EXE_FTL=$EXECUTABLE"_ftl"
1530  EXE_SVD=$EXECUTABLE"_svd"  EXE_SVD=$EXECUTABLE"_svd"
1531    
1532  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
1533    #
1534    # OPTFILE="$OPTFILE"
1535  #  #
1536  # BUILDDIR     : Directory where object files are written  # BUILDDIR     : Directory where object files are written
1537  # SOURCEDIRS   : Directories containing the source (.F) files  # SOURCEDIRS   : Directories containing the source (.F) files
# Line 1328  EXE_AD      = ${EXE_AD} Line 1565  EXE_AD      = ${EXE_AD}
1565  EXE_FTL     = ${EXE_FTL}  EXE_FTL     = ${EXE_FTL}
1566  EXE_SVD     = ${EXE_SVD}  EXE_SVD     = ${EXE_SVD}
1567    
1568    ENABLED_PACKAGES = ${ENABLED_PACKAGES}
1569    DISABLED_PACKAGES = ${DISABLED_PACKAGES}
1570    
1571    # These files are created by Makefile
1572    SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h
1573    
1574  EOF  EOF
1575    
1576  #  Note: figure out some way to add Hyades JAM libraries here  #  Note: figure out some way to add Hyades JAM libraries here
# Line 1392  cat >>$MAKEFILE <<EOF Line 1635  cat >>$MAKEFILE <<EOF
1635  .SUFFIXES: .o .f .p .F .c .F90 .f90  .SUFFIXES: .o .f .p .F .c .F90 .f90
1636    
1637  all: \$(EXECUTABLE)  all: \$(EXECUTABLE)
1638  \$(EXECUTABLE): \$(OBJFILES)  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)
1639            @echo Creating \$@ ...
1640          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
1641  depend:  depend:
1642          @make links          @make links
1643          \$(MAKEDEPEND) -o .f \$(DEFINES) \$(INCLUDES) \$(SRCFILES)          \$(MAKEDEPEND) -o .f \$(DEFINES) \$(INCLUDES) \$(SRCFILES)
1644          ${TOOLSDIR}/f90mkdepend >> \$(MAKEFILE)          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
1645    
1646  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES)  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
1647    
1648  small_f: \$(F77FILES) \$(F90FILES)  small_f: \$(F77FILES) \$(F90FILES)
1649    
# Line 1408  output.txt: \$(EXECUTABLE) Line 1652  output.txt: \$(EXECUTABLE)
1652          @\$(EXECUTABLE) > \$@          @\$(EXECUTABLE) > \$@
1653    
1654  clean:  clean:
1655          -cat AD_CONFIG.template > AD_CONFIG.h          -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl} *.template
         -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl}  
1656  Clean:  Clean:
1657          @make clean          @make clean
1658          @make cleanlinks          @make cleanlinks
1659          -rm -f Makefile.bak genmake_state genmake_*optfile make.log          -rm -f \$(SPECIAL_FILES)
1660            -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak
1661  CLEAN:  CLEAN:
1662          @make Clean          @make Clean
1663          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
# Line 1423  CLEAN: Line 1667  CLEAN:
1667    
1668  #eh3 Makefile: makefile  #eh3 Makefile: makefile
1669  makefile:  makefile:
1670          ${0} $@          $THIS_SCRIPT $@
1671  cleanlinks:  cleanlinks:
1672          -find . -type l -exec rm {} \;          -find . -type l -exec rm {} \;
1673    
1674    # Special targets ($SPECIAL_FILES) which are create by make
1675    ${PACKAGES_DOT_H}:
1676            @echo Creating \$@ ...
1677            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
1678    AD_CONFIG.h:
1679            @echo Creating \$@ ...
1680            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
1681    FC_NAMEMANGLE.h:
1682            @echo Creating \$@ ...
1683            echo "$FC_NAMEMANGLE" > \$@
1684    
1685  # The normal chain of rules is (  .F - .f - .o  )  # The normal chain of rules is (  .F - .f - .o  )
1686  .F.f:  .F.f:
1687          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
# Line 1486  adtaf: ad_taf_output.f Line 1741  adtaf: ad_taf_output.f
1741  adtamc: ad_tamc_output.f  adtamc: ad_tamc_output.f
1742    
1743  ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)
1744            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
1745          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
1746            -rm -f ad_config.template
1747          @make \$(F77FILES)          @make \$(F77FILES)
1748          @make \$(AD_FLOW_FILES)          @make \$(AD_FLOW_FILES)
1749          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f
1750    
1751  ad_taf_output.f: ad_input_code.f  ad_taf_output.f: ad_input_code.f
1752          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f
1753          cat ad_input_code_ad.f | sed -f adjoint_sed > ad_taf_output.f          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f
1754    
1755    adtafonly:
1756            \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f
1757            cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f
1758    
1759  ad_taf: ad_taf_output.o \$(OBJFILES)  ad_taf: ad_taf_output.o \$(OBJFILES)
1760          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
1761    
1762  ad_tamc_output.f: ad_input_code.f  ad_tamc_output.f: ad_input_code.f
1763          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.f          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.f
1764          cat ad_input_code_ad.f | sed -f adjoint_sed > ad_tamc_output.f          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.f
1765    
1766  ad_tamc: ad_tamc_output.o \$(OBJFILES)  ad_tamc: ad_tamc_output.o \$(OBJFILES)
1767          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
# Line 1512  ftltaf: ftl_taf_output.f Line 1773  ftltaf: ftl_taf_output.f
1773  ftltamc: ftl_tamc_output.f  ftltamc: ftl_tamc_output.f
1774    
1775  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)
1776            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
1777          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
1778            -rm -f ftl_config.template
1779          @make \$(F77FILES)          @make \$(F77FILES)
1780          @make \$(AD_FLOW_FILES)          @make \$(AD_FLOW_FILES)
1781          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.f          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.f
1782    
1783  ftl_taf_output.f: ftl_input_code.f  ftl_taf_output.f: ftl_input_code.f
1784          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f
1785          cat ftl_input_code_ftl.f | sed -f adjoint_sed > ftl_taf_output.f          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f
1786    
1787    ftltafonly:
1788            \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f
1789            cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f
1790    
1791  ftl_taf: ftl_taf_output.o \$(OBJFILES)  ftl_taf: ftl_taf_output.o \$(OBJFILES)
1792          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
1793    
1794  ftl_tamc_output.f: ftl_input_code.f  ftl_tamc_output.f: ftl_input_code.f
1795          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.f          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.f
1796          cat ftl_input_code_ftl.f | sed -f adjoint_sed > ftl_tamc_output.f          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.f
1797    
1798  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
1799          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
1800    
1801    
1802  # ... SVD ...  # ... SVD ...
1803  svd: svd_taf  svdtaf: ad_taf_output.f ftl_taf_output.f
1804  svd_taf_f: svd_taf_output.f  svdall: svd_taf
1805    
1806  svd_input_code.f: \$(SRCFILES)  svd_taf: ad_taf_output.o ftl_taf_output.o \$(OBJFILES)
1807          cmp svd_config.template AD_CONFIG.h || cat svd_config.template > AD_CONFIG.h          \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
         @make \$(F77FILES)  
         @make \$(AD_FLOW_FILES)  
         cat \$(AD_FLOW_FILES) \$(AD_FILES) > svd_input_code.f  
   
 svd_taf_output.f: svd_input_code.f  
         \$(TAF) \$(SVD_TAF_FLAGS) \$(TAF_EXTRA) svd_input_code.f  
         cat svd_input_code_ad.f | sed -f adjoint_sed > svd_taf_output.f  
   
 svd_taf: svd_taf_output.o \$(OBJFILES)  
         \$(LINK) -o ${EXE_SVD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) svd_taf_output.o \$(LIBS)  
1808    
1809    
1810  #=========================================  #=========================================
# Line 1588  printf "\n\n# DO NOT DELETE\n" >> $MAKEF Line 1845  printf "\n\n# DO NOT DELETE\n" >> $MAKEF
1845    
1846  printf "\n===  Done  ===\n"  printf "\n===  Done  ===\n"
1847    
1848  #  Write the "template" files for the adjoint builds  # Create special header files
1849  cat >AD_CONFIG.template <<EOF  $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
1850  C  WARNING: This file is automatically generated by genmake2 and  if test ! -f $PACKAGES_DOT_H ; then
1851  C    used by the Makefile rules.  Please DO NOT EDIT this file      mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
1852  C    unless you are CERTAIN that you know what you are doing.  else
1853        cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
1854  #undef ALLOW_ADJOINT_RUN      RETVAL=$?
1855  #undef ALLOW_TANGENTLINEAR_RUN      if test "x$RETVAL" = x0 ; then
1856  #undef ALLOW_ECCO_OPTIMIZATION          rm -f $PACKAGES_DOT_H".tmp"
1857  EOF      else
1858  cat >ad_config.template <<EOF          mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"
1859  C  WARNING: This file is automatically generated by genmake2 and          mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
1860  C    used by the Makefile rules.  Please DO NOT EDIT this file      fi
1861  C    unless you are CERTAIN that you know what you are doing.  fi
1862    if test ! -f AD_CONFIG.h ; then
1863  #define ALLOW_ADJOINT_RUN      $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
1864  #undef ALLOW_TANGENTLINEAR_RUN  fi
 #undef ALLOW_ECCO_OPTIMIZATION  
 EOF  
 cat >ftl_config.template <<EOF  
 C  WARNING: This file is automatically generated by genmake2 and  
 C    used by the Makefile rules.  Please DO NOT EDIT this file  
 C    unless you are CERTAIN that you know what you are doing.  
   
 #undef ALLOW_ADJOINT_RUN  
 #define ALLOW_TANGENTLINEAR_RUN  
 #undef ALLOW_ECCO_OPTIMIZATION  
 EOF  
 cat >svd_config.template <<EOF  
 C  WARNING: This file is automatically generated by genmake2 and  
 C    used by the Makefile rules.  Please DO NOT EDIT this file  
 C    unless you are CERTAIN that you know what you are doing.  
   
 #undef ALLOW_ADJOINT_RUN  
 #undef ALLOW_TANGENTLINEAR_RUN  
 #undef ALLOW_ECCO_OPTIMIZATION  
 EOF  
 cp AD_CONFIG.template AD_CONFIG.h  
1865    
1866    
1867  #  Write the "state" for future records  #  Write the "state" for future records

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