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revision 1.5 by edhill, Wed Aug 27 22:12:31 2003 UTC revision 1.55 by jmc, Sat Dec 6 00:34:29 2003 UTC
# Line 1  Line 1 
1  #!/bin/bash  #! /usr/bin/env bash
2  #  #
3  # $Header$  # $Header$
4  #  #
# Line 8  Line 8 
8  #   modified by aja 01/00  #   modified by aja 01/00
9  #   rewritten in bash by eh3 08/03  #   rewritten in bash by eh3 08/03
10    
11    # Search for particular CPP #cmds associated with packages
12    # usage: test_for_package_in_cpp_options CPP_file package_name
13    test_for_package_in_cpp_options() {
14        cpp_options=$1
15        pkg=$2
16        test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg" || exit 99
17        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg" || exit 99
18        test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg" || exit 99
19        test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg" || exit 99
20    }
21    
22    # Search for particular CPP #cmds associated with MPI
23    # usage: test_for_mpi_in_cpp_eeoptions CPP_file
24    test_for_mpi_in_cpp_eeoptions() {
25        cpp_options=$1
26        test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI" || exit 99
27        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI" || exit 99
28        test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI" || exit 99
29        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI" || exit 99
30    }
31    
32    # Search for particular string in a file. Return 1 if detected, 0 if not
33    # usage: test_for_string_in_file file string
34    test_for_string_in_file() {
35        file=$1
36        strng=$2
37        grep -i "$strng" $file > /dev/null 2>&1
38        RETVAL=$?
39        if test "x${RETVAL}" = x0 ; then
40            echo -n "Error: In $file there is an illegal line: "
41            grep -i "$strng" $file
42            return 1
43        fi
44        return 0
45    }
46    
47    # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to
48    # the package list.
49    expand_pkg_groups() {
50        new_packages=
51        PKG_GROUPS=$ROOTDIR"/pkg/pkg_groups"
52        if test -r $PKG_GROUPS ; then
53            cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp
54            cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp
55            matched=0
56            for i in $PACKAGES ; do
57                line=`grep "^ *$i" ./p2.tmp`
58                RETVAL=$?
59                if test "x$RETVAL" = x0 ; then
60                    matched=1
61                    replace=`echo $line | $AWK '{ $1=""; $2=""; print $0 }'`
62                    echo "    replacing \"$i\" with: $replace"
63                    new_packages="$new_packages $replace"
64                else
65                    new_packages="$new_packages $i"
66                fi
67            done
68            PACKAGES=$new_packages
69            rm -f ./p[1,2].tmp
70        else
71            echo "Warning: can't read package groups definition file: $PKG_GROUPS"
72        fi
73    }
74    
75  # Guess possible config options for this host  # Guess possible config options for this host
76  find_possible_configs()  {  find_possible_configs()  {
77    
78      p_PLATFORM=`uname`"-"`uname -m`      tmp1=`uname`"_"`uname -m`
79      echo "The platform appears to be:"      tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
80      echo "  "$p_PLATFORM      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
81        PLATFORM=`echo $tmp3 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
82      p_LN=      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
83        echo "  The platform appears to be:  $PLATFORM"
84        
85      echo "test" > test      echo "test" > test
86      ln -s ./test link      ln -s ./test link
87      RETVAL=$?      RETVAL=$?
88      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
89          p_LN="ln -s"          LN="ln -s"
90        else
91            echo "Error: \"ln -s\" does not appear to work on this system!"
92            echo "  For help, please contact <MITgcm-support@mitgcm.org>."
93            exit 1
94      fi      fi
95      rm -f test link      rm -f test link
96    
97      p_CPP=`which cpp`      if test "x$CPP" = x ; then
98                CPP="cpp -traditional -P"
99      RETVAL=$?      fi
100      if test "x${RETVAL}" = x0 ; then  
101          p_LN="ln -s"      # makedepend is not always available
102        if test "x${MAKEDEPEND}" = x ; then
103          which makedepend >& /dev/null
104          RETVAL=$?
105          if test "x${RETVAL}" = x1 ; then
106             echo "    makedepend was not found. Using xmakedpend instead."
107             MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
108          fi
109      fi      fi
     rm -f test link  
110    
111      # look for possible fortran compilers      # look for possible fortran compilers
112        tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95"
113      p_FC=      p_FC=
114      for c in f77 g77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95 ; do      for c in $tmp ; do
115          which $c > /dev/null 2>&1          rm -f ./hello.f ./hello
116            cat >> hello.f <<EOF
117          program hello
118          do i=1,3
119            print *, 'hello world : ', i
120          enddo
121          end
122    EOF
123            $c -o hello hello.f > /dev/null 2>&1
124          RETVAL=$?          RETVAL=$?
125          if test "x${RETVAL}" = x0 ; then          if test "x${RETVAL}" = x0 ; then
126              p_FC="$p_FC $c"              p_FC="$p_FC $c"
127          fi          fi
128      done      done
129      echo "Possible FORTRAN compilers appear to be:  "      rm -f ./hello.f ./hello
130      if test "x${p_FC}" = x ; then      if test "x${p_FC}" = x ; then
131          echo "  None found!!!"          cat 1>&2 <<EOF
132    
133    Error: No Fortran compilers were found in your path.  Please specify one using:
134    
135        1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
136        2) a command-line option (eg. "-fc NAME"), or
137        3) the MITGCM_FC environment variable.
138    
139    EOF
140            exit 1
141      else      else
142          echo "  "$p_FC          echo "  The possible FORTRAN compilers found in your path are:"
143            echo "   "$p_FC
144            if test "x$FC" = x ; then
145                FC=`echo $p_FC | $AWK '{print $1}'`
146            fi
147      fi      fi
148    
149      # look for possible MPI libraries      for i in $p_FC ; do
150      mpi_libs=          p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
151      mpi_fort=`which mpif77 2>/dev/null`          if test -r $p_OF ; then
152      RETVAL=$?              OPTFILE=$p_OF
153      if test "x${RETVAL}" = x0 ; then              echo "  The options file:  $p_OF"
154          cat >>test.f <<EOF              echo "    appears to match so we'll use it."
155        PROGRAM HELLO              break
       DO 10, I=1,10  
       PRINT *,'Hello World'  
    10 CONTINUE  
       STOP  
       END  
 EOF  
         eval "$mpi_fort -showme test.f > out"  
         RETVAL=$?  
         if test "x${RETVAL}" = x0 ; then  
             a=`cat out`  
             for i in $a ; do  
                 case $i in  
                     -*)  
                         mpi_libs="$mpi_libs $i" ;;  
                 esac  
             done  
             echo "The MPI libs appear to be:"  
             echo "  "$mpi_libs  
156          fi          fi
157          rm -f test.f out      done
158        if test "x$OPTFILE" = x ; then
159            cat 1>&2 <<EOF
160    
161    Error: No options file was found in:  $ROOTDIR/tools/build_options/
162      that matches this platform ("$PLATFORM") and the compilers found in
163      your path.  Please specify an "optfile" using:
164    
165        1) the command line (eg. "-optfile=path/to/OPTFILE"), or
166        2) the MITGCM_OF environment variable.
167    
168      If you need help, please contact the developers at <MITgcm-support@mitgcm.org>.
169    
170    EOF
171            exit 1
172      fi      fi
173        
174    #     # look for possible MPI libraries
175    #     mpi_libs=
176    #     mpi_fort=`which mpif77 2>/dev/null`
177    #     RETVAL=$?
178    #     if test "x${RETVAL}" = x0 ; then
179    #       cat >>test.f <<EOF
180    #       PROGRAM HELLO
181    #       DO 10, I=1,10
182    #       PRINT *,'Hello World'
183    #    10 CONTINUE
184    #       STOP
185    #       END
186    # EOF
187    #       eval "$mpi_fort -showme test.f > out"
188    #       RETVAL=$?
189    #       if test "x${RETVAL}" = x0 ; then
190    #           a=`cat out`
191    #           for i in $a ; do
192    #               case $i in
193    #                   -*)
194    #                       mpi_libs="$mpi_libs $i" ;;
195    #               esac
196    #           done
197    #           echo "The MPI libs appear to be:"
198    #           echo "  "$mpi_libs
199    #       fi
200    #       rm -f test.f out
201    #     fi
202    
203  }  }
204    
# Line 86  get_pdepend_list()  { Line 208  get_pdepend_list()  {
208      #  strip the comments and then convert the dependency file into      #  strip the comments and then convert the dependency file into
209      #  two arrays: PNAME, DNAME      #  two arrays: PNAME, DNAME
210      cat $1 | sed -e 's/#.*$//g' \      cat $1 | sed -e 's/#.*$//g' \
211          | awk 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \          | $AWK 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \
212          > ./.pd_tmp          > ./.pd_tmp
213      source ./.pd_tmp      . ./.pd_tmp
214      rm -f ./.pd_tmp      rm -f ./.pd_tmp
215    
216      echo -n "PNAME = "${}      echo -n "PNAME = "${}
# Line 97  get_pdepend_list()  { Line 219  get_pdepend_list()  {
219    
220  #  Explain usage  #  Explain usage
221  usage()  {  usage()  {
222      echo  cat <<EOF
223      echo "Usage: "$0" [OPTIONS]"  
224      echo "  where [OPTIONS] can be:"  Usage: "$0" [OPTIONS]
225      echo    where [OPTIONS] can be:
226      echo "    -help | --help | -h | --h"  
227      echo "    -nooptfile | --nooptfile"      -help | --help | -h | --h
228      echo "      -optfile NAME | --optfile NAME | -of NAME | --of NAME"            Print this help message and exit.
229      echo "      -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME"  
230      echo "    -pdepend NAME | --pdepend NAME"      -nooptfile | --nooptfile
231      echo "      -pdepend=NAME | --pdepend=NAME"        -optfile NAME | --optfile NAME | -of NAME | --of NAME
232      echo "    -pdefault NAME | --pdefault NAME"        -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
233      echo "      -pdefault=NAME | --pdefault=NAME"            Use "NAME" as the optfile.  By default, an attempt will be
234      echo "    -makefile NAME | -ma NAME"            made to find an appropriate "standard" optfile in the
235      echo "      --makefile=NAME | -ma=NAME"            tools/build_options/ directory.
236      echo "    -platform NAME | --platform NAME | -pl NAME | --pl NAME"  
237      echo "      -platform=NAME | --platform=NAME | -pl=NAME | --pl=NAME"      -pdepend NAME | --pdepend NAME
238      echo "    -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME"        -pdepend=NAME | --pdepend=NAME
239      echo "      -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME"            Get package dependency information from "NAME".
240      echo "    -mods NAME | --mods NAME | -mo NAME | --mo NAME"  
241      echo "      -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME"      -pdefault NAME | --pdefault NAME
242      echo "    -disable NAME | --disable NAME"        -pdefault=NAME | --pdefault=NAME
243      echo "      -disable=NAME | --disable=NAME"            Get the default package list from "NAME".
244      echo "    -enable NAME | --enable NAME"  
245      echo "      -enable=NAME | --enable=NAME"      -make NAME | -m NAME
246      echo "    -noopt NAME | --noopt NAME"        --make=NAME | -m=NAME
247      echo "      -noopt=NAME | --noopt=NAME"            Use "NAME" for the MAKE program. The default is "make" but
248  #    echo "    -cpp NAME | --cpp NAME"            many platforms, "gmake" is the preferred choice.
249  #    echo "      -cpp=NAME | --cpp=NAME"  
250      echo "    -fortran NAME | --fortran NAME | -fc NAME | --fc NAME"      -makefile NAME | -mf NAME
251      echo "      -fc=NAME | --fc=NAME"        --makefile=NAME | -mf=NAME
252      echo "    -[no]ieee | --[no]ieee"            Call the makefile "NAME".  The default is "Makefile".
253      echo "    -[no]mpi | --[no]mpi"  
254      echo "    -[no]jam | --[no]jam"      -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
255      echo        -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
256      echo "  and NAME is a string such as:"            Specify the location of the MITgcm ROOTDIR as "NAME".
257      echo            By default, genamke will try to find the location by
258      echo "    --enable pkg1   --enable 'pkg1 pkg2'   --enable 'pkg1 pkg2 pkg3'"            looking in parent directories (up to the 5th parent).
259      echo "    -mods=dir1   -mods='dir1'   -mods='dir1 dir2 dir3'"  
260      echo "    -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'"      -mods NAME | --mods NAME | -mo NAME | --mo NAME
261      echo        -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME
262      echo "  which, depending upon your shell, may need to be single-quoted"            Here, "NAME" specifies a list of directories that are
263      echo "  if it contains spaces, dashes, or other special characters."            used for additional source code.  Files found in the
264              "mods list" are given preference over files of the same
265              name found elsewhere.
266    
267        -disable NAME | --disable NAME
268          -disable=NAME | --disable=NAME
269              Here "NAME" specifies a list of packages that we don't
270              want to use.  If this violates package dependencies,
271              genamke will exit with an error message.
272    
273        -enable NAME | --enable NAME
274          -enable=NAME | --enable=NAME
275              Here "NAME" specifies a list of packages that we wish
276              to specifically enable.  If this violates package
277              dependencies, genamke will exit with an error message.
278    
279        -standarddirs NAME | --standarddirs NAME
280          -standarddirs=NAME | --standarddirs=NAME
281              Here, "NAME" specifies a list of directories to be
282              used as the "standard" code.
283    
284        -fortran NAME | --fortran NAME | -fc NAME | --fc NAME
285          -fc=NAME | --fc=NAME
286              Use "NAME" as the fortran compiler.  By default, genmake
287              will search for a working compiler by trying a list of
288              "usual suspects" such as g77, f77, etc.
289    
290        -[no]ieee | --[no]ieee
291              Do or don't use IEEE numerics.  Note that this option
292              *only* works if it is supported by the OPTFILE that
293              is being used.
294    
295      While it is most often a single word, the "NAME" variables specified
296      above can in many cases be a space-delimited string such as:
297    
298        --enable pkg1   --enable 'pkg1 pkg2'   --enable 'pkg1 pkg2 pkg3'
299        -mods=dir1   -mods='dir1'   -mods='dir1 dir2 dir3'
300        -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'
301    
302      which, depending upon your shell, may need to be single-quoted.
303    
304      For more detailed genmake documentation, please see:
305    
306        http://mitgcm.org/devel_HOWTO/
307    
308    EOF
309    
310      exit 1      exit 1
311  }  }
312    
313  #eh3 # This is the generic configuration.  #  Build a CPP macro to automate calling C routines from FORTRAN
314  #eh3 set LN         = ( 'ln -s' )  get_fortran_c_namemangling()  {
315  #eh3 set CPP        = ( '/lib/cpp -P' )      default_nm="#define FC_NAMEMANGLE(X) X ## _"
316  #eh3 set S64        = ( '$(TOOLSDIR)/set64bitConst.sh' )      
317  #eh3 set KPP        = (  )      cat > genmake_test.c <<EOF
318  #eh3 set FC         = ( 'f77' )  void tcall( char * string ) { tsub( string ); }
319  #eh3 set LINK       = $FC  EOF
320  #eh3 set MAKEDEPEND = ( 'makedepend' )      $MAKE genmake_test.o >> genmake_warnings 2>&1
321  #eh3 set INCLUDES   = ( -I. )      RETVAL=$?
322  #eh3 set FFLAGS     = (  )      if test "x$RETVAL" != x0 ; then
323  #eh3 set FOPTIM     = (  )          FC_NAMEMANGLE=$default_nm
324  #eh3 set CFLAGS     = (  )          cat <<EOF>> genmake_errors
325  #eh3 set KFLAGS1    = (  )  
326  #eh3 set KFLAGS2    = (  )  WARNING: C test compile fails
327  #eh3 set LIBS       = (  )  WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
328  #eh3 set KPPFILES   = (  )  WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
329  #eh3 if (! $?NOOPTFILES ) set NOOPTFILES = (  )  EOF
330  #eh3 if (! $?NOOPTFLAGS ) set NOOPTFLAGS = (  )          return 1
331        fi
332        c_tcall=`nm genmake_test.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`
333        RETVAL=$?
334        if test "x$RETVAL" != x0 ; then
335            FC_NAMEMANGLE=$default_nm
336            cat <<EOF>> genmake_warnings
337    
338    WARNING: The "nm" command failed.
339    WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
340    WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
341    EOF
342            return 1
343        fi
344        cat > genmake_tcomp.f <<EOF
345          subroutine tcall( string )
346          character*(*) string
347          call tsub( string )
348          end
349    EOF
350        $FC $FFLAGS $DEFINES -c genmake_tcomp.f >> genmake_warnings 2>&1
351        RETVAL=$?
352        if test "x$RETVAL" != x0 ; then
353            FC_NAMEMANGLE=$default_nm
354            cat <<EOF>> genmake_warnings
355    
356    WARNING: FORTRAN test compile fails -- please see "genmake_errors"
357    WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
358    WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
359    EOF
360            return 1
361        fi
362        f_tcall=`nm genmake_tcomp.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`
363        RETVAL=$?
364        if test "x$RETVAL" != x0 ; then
365            FC_NAMEMANGLE=$default_nm
366            cat <<EOF>> genmake_warnings
367    
368    WARNING: The "nm" command failed.
369    WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
370    WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
371    EOF
372            return 1
373        fi
374    
375        c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
376        f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
377        c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
378        f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
379    
380        nmangle="X"
381        if test "x$c_a" != "x$f_a" ; then
382            comm="echo x$f_a | sed -e 's|x$c_a||'"
383            a=`eval $comm`
384            nmangle="$a ## $nmangle"
385        fi
386        if test "x$c_b" != "x$f_b" ; then
387            comm="echo x$f_b | sed -e 's|x$c_b||'"
388            b=`eval $comm`
389            nmangle="$nmangle ## $b"
390        fi
391    
392        FC_NAMEMANGLE="#define FC_NAMEMANGLE(X)  $nmangle"
393    
394        #  cleanup the testing files
395        rm -f genmake_tcomp.* genmake_test.*
396    }
397    
398    
399    check_HAVE_CLOC()  {
400        get_fortran_c_namemangling
401        cat <<EOF > genmake_tc_1.c
402    $FC_NAMEMANGLE
403    #include <stdio.h>
404    #include <stdlib.h>
405    #include <unistd.h>
406    #include <assert.h>
407    #include <sys/time.h>
408    void FC_NAMEMANGLE(cloc) ( double *curtim )
409    {
410     struct timeval tv1;
411     gettimeofday(&tv1 , (void *)NULL );
412     *curtim =  (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6);
413     *curtim = *curtim/1.E6;
414    }
415    EOF
416        make genmake_tc_1.o >> genmake_tc.log 2>&1
417        RET_C=$?
418        cat <<EOF > genmake_tc_2.f
419          program hello
420          Real*8 wtime
421          external cloc
422          call cloc(wtime)
423          print *," HELLO WORLD", wtime
424          end program hello
425    EOF
426        $FC $FFLAGS -o genmake_tc genmake_tc_2.f genmake_tc_1.o >> genmake_tc.log 2>&1
427        RET_F=$?
428        test -x ./genmake_tc  &&  ./genmake_tc >> genmake_tc.log 2>&1
429        RETVAL=$?
430        if test "x$RETVAL" = x0 ; then
431            HAVE_CLOC=t
432            DEFINES="$DEFINES -DHAVE_CLOC"
433        fi
434        rm -f genmake_tc*
435    }
436    
437    
438  #  Set defaults here  #  Set defaults here
439  COMMANDL="$0 $@"  COMMANDL="$0 $@"
# Line 170  S64= Line 444  S64=
444  KPP=  KPP=
445  FC=  FC=
446  LINK=  LINK=
447    # DEFINES="-DWORDLENGTH=4"
448    DEFINES=
449  PACKAGES=  PACKAGES=
450  ENABLE=  ENABLE=
451  DISABLE=  DISABLE=
452  MAKEFILE=  MAKEFILE=
453  MAKEDEPEND=  MAKEDEPEND=
454  PDEPEND=  PDEPEND=
455  DUMPSTATE=f  DUMPSTATE=t
456  PDEFAULT=  PDEFAULT=
457  OPTFILE=  OPTFILE=
458  INCLUDES="-I."  INCLUDES="-I."
# Line 190  KPPFILES= Line 466  KPPFILES=
466  NOOPTFILES=  NOOPTFILES=
467  NOOPTFLAGS=  NOOPTFLAGS=
468    
469    # DEFINES checked by test compilation
470    HAVE_SYSTEM=
471    HAVE_FDATE=
472    FC_NAMEMANGLE=
473    HAVE_CLOC=
474    
475  MODS=  MODS=
476  TOOLSDIR=  TOOLSDIR=
477  SOURCEDIRS=  SOURCEDIRS=
478  INCLUDEDIRS=  INCLUDEDIRS=
479    STANDARDDIRS=
480    
481  PWD=`pwd`  PWD=`pwd`
482  MAKE=make  MAKE=make
483    AWK=awk
484  THISHOSTNAME=`hostname`  THISHOSTNAME=`hostname`
485  THISCWD=`pwd`  THISCWD=`pwd`
486  THISDATE=`date`  THISDATE=`date`
487  MACHINE=`uname -a`  MACHINE=`uname -a`
488    EXECUTABLE=
489    EXEHOOK=
490    EXEDIR=
491    PACKAGES_CONF=
492    IEEE=
493    if test "x$MITGCM_IEEE" != x ; then
494        IEEE=$MITGCM_IEEE
495    fi
496    
497    AUTODIFF_PKG_USED=f
498    AD_OPTFILE=
499    TAF=
500    AD_TAF_FLAGS=
501    FTL_TAF_FLAGS=
502    SVD_TAF_FLAGS=
503    TAF_EXTRA=
504    TAMC=
505    AD_TAMC_FLAGS=
506    FTL_TAF_FLAGS=
507    SVD_TAMC_FLAGS=
508    TAMC_EXTRA=
509    
510    
511  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
512  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE NOOPT"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
513  gm_s2="FC IEEE MPI JAM DUMPSTATE"  gm_s2="FC IEEE MPI JAM DUMPSTATE STANDARDDIRS"
514    
515  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
516  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
517  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
518  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOSTNAME THISDATE MACHINE"  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOSTNAME THISDATE MACHINE"
519    gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
520    gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE"
521    
522  gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5"  #  The following are all related to adjoint/tangent-linear stuff
523    gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
524    gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"
525    gm_s12="TAF_EXTRA TAMC_EXTRA"
526    
527    gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7"
528    gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"
529    
530    cat <<EOF
531    
532    GENMAKE :
533    
534    A program for GENerating MAKEfiles for the MITgcm project.  For a
535    quick list of options, use "genmake -h" or for more detail see:
536    
537      http://mitgcm.org/devel_HOWTO/
538    
539    EOF
540    
 echo  
541  echo "===  Processing options files and arguments  ==="  echo "===  Processing options files and arguments  ==="
542  gm_local="./gm_local"  gm_local="genmake_local"
543    for i in . $MODS ; do
544        if test -r $i/$gm_local ; then
545            . $i/$gm_local
546            break
547        fi
548    done
549  echo -n "  getting local config information:  "  echo -n "  getting local config information:  "
550  if test -e $gm_local ; then  if test -e $gm_local ; then
551      echo "using $gm_local"      echo "using $gm_local"
552      source $gm_local      . $gm_local
553      # echo "DISABLE=$DISABLE"      # echo "DISABLE=$DISABLE"
554      # echo "ENABLE=$ENABLE"      # echo "ENABLE=$ENABLE"
555  else  else
# Line 238  fi Line 567  fi
567  #   n=$(( $n + 1 ))  #   n=$(( $n + 1 ))
568  #done  #done
569  #parse_options  #parse_options
   
570  ac_prev=  ac_prev=
571  for ac_option ; do  for ac_option ; do
572    
# Line 263  for ac_option ; do Line 591  for ac_option ; do
591          -optfile=* | --optfile=* | -of=* | --of=*)          -optfile=* | --optfile=* | -of=* | --of=*)
592              OPTFILE=$ac_optarg ;;              OPTFILE=$ac_optarg ;;
593                    
594            -adoptfile | --adoptfile | -adof | --adof)
595                ac_prev=AD_OPTFILE ;;
596            -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
597                AD_OPTFILE=$ac_optarg ;;
598            
599          -pdepend | --pdepend)          -pdepend | --pdepend)
600              ac_prev=PDEPEND ;;              ac_prev=PDEPEND ;;
601          -pdepend=* | --pdepend=*)          -pdepend=* | --pdepend=*)
# Line 273  for ac_option ; do Line 606  for ac_option ; do
606          -pdefault=* | --pdefault=*)          -pdefault=* | --pdefault=*)
607              PDEFAULT=$ac_optarg ;;              PDEFAULT=$ac_optarg ;;
608                    
609          -makefile | -ma)          -make | --make | -m | --m)
610                ac_prev=MAKE ;;
611            -make=* | --make=* | -m=* | --m=*)
612                MAKE=$ac_optarg ;;
613            
614            -makefile | --makefile | -ma | --ma)
615              ac_prev=MAKEFILE ;;              ac_prev=MAKEFILE ;;
616          --makefile=* | -ma=*)          -makefile=* | --makefile=* | -ma=* | --ma=*)
617              MAKEFILE=$ac_optarg ;;              MAKEFILE=$ac_optarg ;;
618                    
619          -platform | --platform | -pl | --pl)          -platform | --platform | -pl | --pl | -platform=* | --platform=* | -pl=* | --pl=*)
620              ac_prev=PLATFORM ;;              echo "ERROR: The platform option has been removed.  Please specify"
621          -platform=* | --platform=* | -pl=* | --pl=*)              echo "  the build options using the \"optfile\" mechanism."
622              PLATFORM=$ac_optarg ;;              echo
623                usage
624                ;;
625                    
626          -rootdir | --rootdir | -rd | --rd)          -rootdir | --rootdir | -rd | --rd)
627              ac_prev=ROOTDIR ;;              ac_prev=ROOTDIR ;;
# Line 303  for ac_option ; do Line 643  for ac_option ; do
643          -enable=* | --enable=*)          -enable=* | --enable=*)
644              ENABLE=$ac_optarg ;;              ENABLE=$ac_optarg ;;
645                    
646          -noopt | --noopt)          -standarddirs | --standarddirs)
647              ac_prev=NOOPT ;;              ac_prev=STANDARDDIRS ;;
648          -noopt=* | --noopt=*)          -standarddirs=* | --standarddirs=*)
649              NOOPT=$ac_optarg ;;              STANDARDDIRS=$ac_optarg ;;
650            
651  #           -cpp | --cpp)  #           -cpp | --cpp)
652  #               ac_prev=cpp ;;  #               ac_prev=cpp ;;
653  #           -cpp=* | --cpp=*)  #           -cpp=* | --cpp=*)
# Line 319  for ac_option ; do Line 659  for ac_option ; do
659              FC=$ac_optarg ;;              FC=$ac_optarg ;;
660                    
661          -ieee | --ieee)          -ieee | --ieee)
662              IEEE=1 ;;              IEEE=true ;;
663          -noieee | --noieee)          -noieee | --noieee)
664              IEEE=0 ;;              IEEE= ;;
665                    
666          -mpi | --mpi)  #       -jam | --jam)
667              MPI=1 ;;  #           JAM=1 ;;
668          -nompi | --nompi)  #       -nojam | --nojam)
669              MPI=0 ;;  #           JAM=0 ;;
           
         -jam | --jam)  
             JAM=1 ;;  
         -nojam | --nojam)  
             JAM=0 ;;  
670                    
671          -ds | --ds)          -ds | --ds)
672              DUMPSTATE=t ;;              DUMPSTATE=t ;;
673                    
674            -taf_extra | --taf_extra)
675                ac_prev=TAF_EXTRA ;;
676            -taf_extra=* | --taf_extra=*)
677                TAF_EXTRA=$ac_optarg ;;
678    
679            -tamc_extra | --tamc_extra)
680                ac_prev=TAMC_EXTRA ;;
681            -tamc_extra=* | --tamc_extra=*)
682                TAMC_EXTRA=$ac_optarg ;;
683    
684          -*)          -*)
685              echo "Error: unrecognized option: "$ac_option              echo "Error: unrecognized option: "$ac_option
686              usage              usage
# Line 350  for ac_option ; do Line 695  for ac_option ; do
695            
696  done  done
697    
698    if test -f ./.genmakerc ; then
699        echo
700        echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
701        echo "  file.  This file format is no longer supported.  Please see:"
702        echo
703        echo "    http://mitgcm.org/devel_HOWTO/"
704        echo
705        echo "  for directions on how to setup and use the new \"genmake2\" input"
706        echo "  files and send an email to MITgcm-support@mitgcm.org if you want help."
707        echo
708    fi
709    
710    if test "x${ROOTDIR}" = x ; then
711        if test "${PWD##/*/}" = "bin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then
712            ROOTDIR=".."
713        else
714            for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
715                if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
716                    ROOTDIR=$d
717                    echo -n "Warning:  ROOTDIR was not specified but there appears to be"
718                    echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."
719                    break
720                fi
721            done
722        fi
723    fi
724    if test "x${ROOTDIR}" = x ; then
725        echo "Error: Cannot determine ROOTDIR for MITgcm code."
726        echo "  Please specify a ROOTDIR using either an options "
727        echo "  file or a command-line option."
728        exit 1
729    fi
730    if test ! -d ${ROOTDIR} ; then
731        echo "Error: the specified ROOTDIR (\"$ROOTDIR\") does not exist!"
732        exit 1
733    fi
734    
735  echo "  getting OPTFILE information:  "  echo "  getting OPTFILE information:  "
736  if test "x${OPTFILE}" = x ; then  if test "x${OPTFILE}" = x ; then
737      echo "Warning: no OPTFILE specified so we'll look for possible settings"      if test "x$MITGCM_OF" = x ; then
738      printf "\n===  Searching for possible settings for OPTFILE  ===\n"          echo "Warning: no OPTFILE specified so we'll look for possible settings"
739      find_possible_configs          printf "\n===  Searching for possible settings for OPTFILE  ===\n"
740  else          find_possible_configs
     if test "x$OPTFILE" = xNONE ; then  
         echo "    OPTFILE=NONE so we'll try to use default settings"  
741      else      else
742          if test -f "$OPTFILE" -a -r "$OPTFILE" ; then          OPTFILE=$MITGCM_OF
743              echo "    using OPTFILE=\"$OPTFILE\""      fi
744              source "$OPTFILE"  fi
745              RETVAL=$?  if test "x$OPTFILE" != xNONE ; then
746              if test "x$RETVAL" != x0 ; then      if test -f "$OPTFILE" -a -r "$OPTFILE" ; then
747                  echo -n "Error: failed to source OPTFILE \"$OPTFILE\""          echo "    using OPTFILE=\"$OPTFILE\""
748                  echo "--please check that variable syntax is bash-compatible"          . "$OPTFILE"
749                  exit 1          RETVAL=$?
750              fi          if test "x$RETVAL" != x0 ; then
751              if test "x$DUMPSTATE" != xf ; then              echo -n "Error: failed to source OPTFILE \"$OPTFILE\""
752                  cp -f $OPTFILE "gm_optfile"              echo "--please check that variable syntax is bash-compatible"
             fi  
         else  
             echo "Error: can't read OPTFILE=\"$OPTFILE\""  
753              exit 1              exit 1
754          fi          fi
755            if test "x$DUMPSTATE" != xf ; then
756                cp -f $OPTFILE "genmake_optfile"
757            fi
758        else
759            echo "Error: can't read OPTFILE=\"$OPTFILE\""
760            exit 1
761      fi      fi
762  fi  fi
763    
764    echo "  getting AD_OPTFILE information:  "
765    if test "x${AD_OPTFILE}" = x ; then
766        if test "x$MITGCM_AD_OF" = x ; then
767            AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default
768        else
769            AD_OPTFILE=$MITGCM_AD_OF
770        fi
771    fi
772    if test "x${AD_OPTFILE}" != xNONE ; then
773        if test -f "$AD_OPTFILE" -a -r "$AD_OPTFILE" ; then
774            echo "    using AD_OPTFILE=\"$AD_OPTFILE\""
775            . "$AD_OPTFILE"
776            RETVAL=$?
777            if test "x$RETVAL" != x0 ; then
778                echo -n "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
779                echo "--please check that variable syntax is bash-compatible"
780                exit 1
781            fi
782            if test "x$DUMPSTATE" != xf ; then
783                cp -f $AD_OPTFILE "genmake_ad_optfile"
784            fi
785        else
786            echo "Error: can't read AD_OPTFILE=\"$AD_OPTFILE\""
787            exit 1
788        fi
789    fi
790    
791    #  Check that FC, LINK, CPP, S64, LN, and MAKE are defined.  If not,
792    #  either set defaults or complain and abort!
793    if test "x$FC" = x ; then
794        cat <<EOF 1>&2
795    
796    Error: no Fortran compiler: please specify using one of the following:
797      1) within the options file ("FC=...") as specified by "-of=OPTFILE"
798      2) the "-fc=XXX" command-line option
799      3) the "./genmake_local" file
800    EOF
801        exit 1
802    fi
803    if test "x$LINK" = x ; then
804        LINK=$FC
805    fi
806    if test "x$CPP" = x ; then
807        CPP="cpp"
808    fi
809    if test "x$MAKE" = x ; then
810        MAKE="make"
811    fi
812    echo "#define A a" | $CPP > test_cpp 2>&1
813    RETVAL=$?
814    if test "x$RETVAL" != x0 ; then
815        cat <<EOF 1>&2
816    
817    Error: C pre-processor "$CPP" failed the test case: please specify using:
818    
819      1) within the options file ("CPP=...") as specified by "-of=OPTFILE"
820      2) the "./genmake_local" file
821      3) with the CPP environment variable
822    
823    EOF
824        exit 1
825    else
826        rm -f test_cpp
827    fi
828    if test "x$MAKEDEPEND" = x ; then
829        MAKEDEPEND=makedepend
830    fi
831    if test "x$LN" = x ; then
832        LN="ln -s"
833    fi
834    echo "test" > genmake_test_ln
835    $LN genmake_test_ln genmake_tlink
836    RETVAL=$?
837    if test "x$RETVAL" != x0 ; then
838        cat <<EOF 1>&2
839    
840    Error: The command "ln -s" failed -- please specify a working soft-link
841      command in the optfile.
842    
843    EOF
844        exit 1
845    fi
846    rm -f genmake_test_ln genmake_tlink
847    
848    
849    printf "\n===  Checking system libraries  ===\n"
850    echo -n "  Do we have the system() command using $FC...  "
851    cat > genmake_tcomp.f <<EOF
852          program hello
853          call system('echo hi')
854          end
855    EOF
856    $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1
857    RETVAL=$?
858    if test "x$RETVAL" = x0 ; then
859        HAVE_SYSTEM=t
860        DEFINES="$DEFINES -DHAVE_SYSTEM"
861        echo "yes"
862    else
863        HAVE_SYSTEM=
864        echo "no"
865    fi
866    rm -f genmake_tcomp*
867    
868    echo -n "  Do we have the fdate() command using $FC...  "
869    cat > genmake_tcomp.f <<EOF
870          program hello
871          CHARACTER(128) string
872          string = ' '
873          call fdate( string )
874          print *, string
875          end
876    EOF
877    $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1
878    RETVAL=$?
879    if test "x$RETVAL" = x0 ; then
880        HAVE_FDATE=t
881        DEFINES="$DEFINES -DHAVE_FDATE"
882        echo "yes"
883    else
884        HAVE_FDATE=
885        echo "no"
886    fi
887    rm -f genmake_tcomp*
888    
889    echo -n "  Can we call simple C routines (here, \"cloc()\") using $FC...  "
890    check_HAVE_CLOC
891    if test "x$HAVE_CLOC" != x ; then
892        echo "yes"
893    else
894        echo "no"
895    fi
896    rm -f genmake_t*
897    
898    
899  printf "\n===  Setting defaults  ===\n"  printf "\n===  Setting defaults  ===\n"
900  echo -n "  Adding MODS directories:  "  echo -n "  Adding MODS directories:  "
901  for d in $MODS ; do  for d in $MODS ; do
# Line 400  if test "x${PLATFORM}" = x ; then Line 918  if test "x${PLATFORM}" = x ; then
918      PLATFORM=$p_PLATFORM      PLATFORM=$p_PLATFORM
919  fi  fi
920    
 if test "x${ROOTDIR}" = x ; then  
     if test "${PWD##/*/}" = "bin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then  
         ROOTDIR=".."  
     else  
         for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do  
             if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then  
                 ROOTDIR=$d  
                 echo -n "Warning:  ROOTDIR was not specified but there appears to be"  
                 echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."  
                 break  
             fi  
         done  
     fi  
 fi  
 if test "x${ROOTDIR}" = x ; then  
     echo "Error: Cannot determine ROOTDIR for MITgcm code."  
     echo "  Please specify a ROOTDIR using either an options "  
     echo "  file or a command-line option."  
     exit 1  
 fi  
 if test ! -d ${ROOTDIR} ; then  
     echo "Error: the specified ROOTDIR (\"$ROOTDIR\") does not exist!"  
     exit 1  
 fi  
   
921  if test "x${EXEDIR}" = x ; then  if test "x${EXEDIR}" = x ; then
922      if test "${PWD##/*/}" = "bin" -a -d ../exe -a $ROOTDIR = .. ; then      if test "${PWD##/*/}" = "bin" -a -d ../exe -a $ROOTDIR = .. ; then
923          EXEDIR=../exe          EXEDIR=../exe
# Line 444  if test ! -d ${TOOLSDIR} ; then Line 937  if test ! -d ${TOOLSDIR} ; then
937      echo "Error: the specified $TOOLSDIR (\"$TOOLSDIR\") does not exist!"      echo "Error: the specified $TOOLSDIR (\"$TOOLSDIR\") does not exist!"
938      exit 1      exit 1
939  fi  fi
940    if test "x$S64" = x ; then
941        S64='$(TOOLSDIR)/set64bitConst.sh'
942    fi
943    THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
944    
945  EXECUTABLE=${EXECUTABLE:-mitgcmuv}  EXECUTABLE=${EXECUTABLE:-mitgcmuv}
946    
# Line 452  EXECUTABLE=${EXECUTABLE:-mitgcmuv} Line 949  EXECUTABLE=${EXECUTABLE:-mitgcmuv}
949  #  they appear as regular source code  #  they appear as regular source code
950  if test -r $ROOTDIR"/eesupp/src/Makefile" ; then  if test -r $ROOTDIR"/eesupp/src/Makefile" ; then
951      echo "  Making source files in eesupp from templates"      echo "  Making source files in eesupp from templates"
952      $MAKE -C $ROOTDIR"/eesupp/src/" > make_eesupp.errors 2>&1      ( cd $ROOTDIR"/eesupp/src/" && $MAKE ) > make_eesupp.errors 2>&1
953      RETVAL=$?      RETVAL=$?
954      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
955          rm -f make_eesupp.errors          rm -f make_eesupp.errors
# Line 482  echo "  getting package dependency info Line 979  echo "  getting package dependency info
979  #  Strip the comments and then convert the dependency file into  #  Strip the comments and then convert the dependency file into
980  #  two arrays: PNAME, DNAME  #  two arrays: PNAME, DNAME
981  cat $PDEPEND | sed -e 's/#.*$//g' \  cat $PDEPEND | sed -e 's/#.*$//g' \
982      | awk 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \      | $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \
983      > ./.pd_tmp      > ./.pd_tmp
984  RETVAL=$?  RETVAL=$?
985  if test ! "x${RETVAL}" = x0 ; then  if test ! "x${RETVAL}" = x0 ; then
986      echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\""      echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\""
987      exit 1      exit 1
988  fi  fi
989  source ./.pd_tmp  . ./.pd_tmp
990  rm -f ./.pd_tmp  rm -f ./.pd_tmp
991    
992  echo  -n "  checking default package list:  "  #  Search for default packages.  Note that a "$ROOTDIR/pkg/pkg_groups"
993    #  file should eventually be added so that, for convenience, one can
994    #  specify groups of packages using names like "ocean" and "atmosphere".
995    echo "  checking default package list:  "
996    if test "x${PDEFAULT}" = x ; then
997        for i in "." $MODS ; do
998            if test -r $i"/packages.conf" ; then
999                    PDEFAULT=$i"/packages.conf"
1000                    break
1001            fi
1002        done
1003    fi
1004  if test "x${PDEFAULT}" = x ; then  if test "x${PDEFAULT}" = x ; then
1005      PDEFAULT="$ROOTDIR/pkg/pkg_default"      PDEFAULT="$ROOTDIR/pkg/pkg_default"
1006  fi  fi
1007  if test "x${PDEFAULT}" = xNONE ; then  if test "x${PDEFAULT}" = xNONE ; then
1008      echo "default packages file disabled"      echo "    default packages file disabled"
1009  else  else
1010      if test ! -r $PDEFAULT ; then      if test ! -r $PDEFAULT ; then
         echo ""  
1011          echo "Warning:  can't read default packages from PDEFAULT=\"$PDEFAULT\""          echo "Warning:  can't read default packages from PDEFAULT=\"$PDEFAULT\""
1012      else      else
1013          echo "  using PDEFAULT=\"$PDEFAULT\""          echo "    using PDEFAULT=\"$PDEFAULT\""
1014          #  Strip the comments and add all the names          #  Strip the comments and add all the names
1015          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | awk '(NF>0){print $0}'`          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1016          RETVAL=$?          RETVAL=$?
1017          if test "x${RETVAL}" != x0 ; then          if test "x${RETVAL}" != x0 ; then
1018              echo -n "Error: can't parse default package list "              echo -n "Error: can't parse default package list "
# Line 515  else Line 1022  else
1022          for i in $def ; do          for i in $def ; do
1023              PACKAGES="$PACKAGES $i"              PACKAGES="$PACKAGES $i"
1024          done          done
1025          echo "    packages are:  $PACKAGES"          echo "    before group expansion packages are: $PACKAGES"
1026            expand_pkg_groups
1027            echo "    after group expansion packages are:  $PACKAGES"
1028      fi      fi
1029  fi  fi
1030    
# Line 534  for p in $PACKAGES ; do Line 1043  for p in $PACKAGES ; do
1043  done  done
1044  PACKAGES="$pack"  PACKAGES="$pack"
1045  echo "  applying ENABLE settings"  echo "  applying ENABLE settings"
1046  rm -f ./.tmp_pack  echo "" > ./.tmp_pack
1047  PACKAGES="$PACKAGES $ENABLE"  PACKAGES="$PACKAGES $ENABLE"
1048  for i in $PACKAGES ; do  for i in $PACKAGES ; do
1049      if test ! -d "$ROOTDIR/pkg/$i" ; then      if test ! -d "$ROOTDIR/pkg/$i" ; then
# Line 625  for i in $PACKAGES ; do Line 1134  for i in $PACKAGES ; do
1134      if test -d $adr ; then      if test -d $adr ; then
1135          SOURCEDIRS="$SOURCEDIRS $adr"          SOURCEDIRS="$SOURCEDIRS $adr"
1136          INCLUDEDIRS="$INCLUDEDIRS $adr"          INCLUDEDIRS="$INCLUDEDIRS $adr"
1137            if test "x$i" = xautodiff ; then
1138                AUTODIFF_PKG_USED=t
1139            fi
1140      else      else
1141          echo "Error: the directory \"$adr\" for package $i doesn't exist"          echo "Error: the directory \"$adr\" for package $i doesn't exist"
1142          exit 1          exit 1
1143      fi      fi
1144  done  done
1145    
 #  This is compatible with the old genmake.  The "DISABLE_*" flags  
 #  need to be replaced by the "ALLOW_*" flags set below.  
 #  
 # echo -n "  Setting package-specific CPP flags:  "  
 # pkrm=( mom_fluxform mom_vecinv generic_advdiff )  
 # pkrmdef=( -DDISABLE_MOM_FLUXFORM -DDISABLE_MOM_VECINV -DDISABLE_GENERIC_ADVDIFF -DDISABLE_DEBUGMODE )  
 # echo -n "  "  
 # i=0  
 # while test $i -lt "${#pkrm[@]}" ; do  
 #     echo "$PACKAGES" | grep "${pk[$i]}" > /dev/null 2>&1  
 #     RETVAL=$?  
 #     if test "x$RETVAL" = x1 ; then  
 #       DEFINES="$DEFINES ${pkdef[$i]}"  
 #       echo -n " ${pkdef[$i]}"  
 #     fi  
 #     i=$(( $i + 1 ))  
 # done  
 # echo  
1146    
1147  echo "  Setting package-specific CPP flags in CPP_OPTIONS.h:"  # Create a list of #define and #undef to enable/disable packages
1148  CPP_OPTIONS=  PACKAGES_DOT_H=PACKAGES_CONFIG.h
 spaths="$SOURCEDIRS"  
 for i in $spaths ; do  
     try="$i/CPP_OPTIONS.h"  
     #  echo -n "    trying $try : "  
     if test -f $try -a -r $try ; then  
         echo "    found CPP_OPTIONS=\"$try\""  
         CPP_OPTIONS="$try"  
         if test "x$i" != "x." ; then  
             cp -f $CPP_OPTIONS .  
         fi  
         break  
     fi  
 done  
 if test "x$CPP_OPTIONS" = x ; then  
     echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"  
     exit 1  
 fi  
 if test -e CPP_OPTIONS.h ; then  
     if test ! -e CPP_OPTIONS.h.bak ; then  
         cp -f CPP_OPTIONS.h CPP_OPTIONS.h.bak  
     fi  
     cat CPP_OPTIONS.h \  
         | awk 'BEGIN{p=1;} ($1=="C===" && $2=="GENMAKE"){p=0;} {if (p==1) print $0}' \  
         > CPP_OPTIONS.h.tmp  
 fi  
 cat <<EOF >>CPP_OPTIONS.h.tmp  
 C=== GENMAKE v2 ===  
 C  The following defines have been set by GENMAKE, so please edit  
 C  them only if you know what you're doing.  In general, you should  
 C  add or remove packages by re-running genmake with different  
 C  "-enable" and/or "-disable" options.  
   
 C  Packages disabled by genmake:  
 EOF  
1149  #  The following UGLY HACK sets multiple "#undef"s and it needs to go  #  The following UGLY HACK sets multiple "#undef"s and it needs to go
1150  #  away.  On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h  #  away.  On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h
1151  #  file would eventually be split up so that all package-related #define  #  file would eventually be split up so that all package-related #define
1152  #  statements could be separated and handled only by genmake.  #  statements could be separated and handled only by genmake.
1153  names=`ls -1 "$ROOTDIR/pkg"`  names=`ls -1 "$ROOTDIR/pkg"`
1154  all_pack=  all_pack=
1155    DISABLED_PACKAGES=
1156  for n in $names ; do  for n in $names ; do
1157      if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then      if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then
1158          has_pack="f"          has_pack="f"
# Line 702  for n in $names ; do Line 1163  for n in $names ; do
1163              fi              fi
1164          done          done
1165          if test "x$has_pack" = xf ; then          if test "x$has_pack" = xf ; then
1166              undef=`echo "ALLOW_$n" | awk '{print toupper($0)}'`              undef=`echo "ALLOW_$n" | $AWK '{print toupper($0)}'`
1167              echo "#undef $undef" >> CPP_OPTIONS.h.tmp              DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
   
 #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  
             case $n in  
                 mom_fluxform)  
                     DEFINES="$DEFINES -DDISABLE_MOM_FLUXFORM"  
                     ;;  
                 mom_vecinv)  
                     DEFINES="$DEFINES -DDISABLE_MOM_VECINV"  
                     ;;  
                 generic_advdiff)  
                     DEFINES="$DEFINES -DDISABLE_GENERIC_ADVDIFF"  
                     ;;  
                 debug)  
                     DEFINES="$DEFINES -DDISABLE_DEBUGMODE"  
                     ;;  
             esac  
 #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  
   
1168          fi          fi
1169      fi      fi
1170  done  done
1171  cat <<EOF >>CPP_OPTIONS.h.tmp  ENABLED_PACKAGES=
   
 C  Packages enabled by genmake:  
 EOF  
1172  for i in $PACKAGES ; do  for i in $PACKAGES ; do
1173      def=`echo "ALLOW_$i" | awk '{print toupper($0)}'`      def=`echo "ALLOW_$i" | $AWK '{print toupper($0)}'`
1174      echo "#define $def" >> CPP_OPTIONS.h.tmp      ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
1175    #eh3 DEFINES="$DEFINES -D$def"
1176    
1177  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!
1178      case $i in      case $i in
1179          aim_v23)          aim_v23)
1180              echo "#define   ALLOW_AIM" >> CPP_OPTIONS.h.tmp              ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
1181                echo "Warning: ALLOW_AIM is set to enable aim_v23."
1182              ;;              ;;
1183      esac      esac
1184  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!
1185    
1186  done  done
 mv -f CPP_OPTIONS.h.tmp CPP_OPTIONS.h  
1187    
1188  echo "  Adding STANDARDDIRS"  echo "  Adding STANDARDDIRS"
1189  BUILDDIR=${BUILDDIR:-.}  BUILDDIR=${BUILDDIR:-.}
1190  STANDARDDIRS=${STANDARDDIRS:-"eesupp model"}  if test "x$STANDARDDIRS" = x ; then
1191        STANDARDDIRS="eesupp model"
1192    fi
1193  for d in $STANDARDDIRS ; do  for d in $STANDARDDIRS ; do
1194      adr="$ROOTDIR/$d/src"      adr="$ROOTDIR/$d/src"
1195      if test ! -d $adr ; then      if test ! -d $adr ; then
# Line 766  for d in $STANDARDDIRS ; do Line 1209  for d in $STANDARDDIRS ; do
1209      fi      fi
1210  done  done
1211    
1212    echo "  Searching for *OPTIONS.h files in order to warn about the presence"
1213    echo "    of \"#define \"-type statements that are no longer allowed:"
1214    CPP_OPTIONS=
1215    CPP_EEOPTIONS=
1216    spaths=". $INCLUDEDIRS"
1217    names=`ls -1 "$ROOTDIR/pkg"`
1218    for i in $spaths ; do
1219        try="$i/CPP_OPTIONS.h"
1220        if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
1221            echo "    found CPP_OPTIONS=\"$try\""
1222            CPP_OPTIONS="$try"
1223            # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
1224            for n in $names ; do
1225                test_for_package_in_cpp_options $CPP_OPTIONS $n
1226            done
1227        fi
1228        try="$i/CPP_EEOPTIONS.h"
1229        if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
1230            echo "    found CPP_EEOPTIONS=\"$try\""
1231            # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
1232    #**** not yet enabled ****
1233    #        test_for_mpi_in_cpp_eeoptions $try
1234    #**** not yet enabled ****
1235            CPP_EEOPTIONS="$try"
1236        fi
1237    done
1238    if test "x$CPP_OPTIONS" = x ; then
1239        echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"
1240        exit 1
1241    fi
1242    
1243    #  Here, we build the list of files to be "run through" the adjoint
1244    #  compiler.
1245    if test -f ./ad_files ; then
1246        rm -f ./ad_files
1247    fi
1248    echo "  Creating the list of files for the adjoint compiler."
1249    for i in $SOURCEDIRS ; do
1250        list_files=`( cd $i && ls -1 *.list 2>/dev/null )`
1251        for j in $list_files ; do
1252            cat $i/$j >> ad_files
1253        done
1254    done
1255    
1256  echo  echo
1257  echo "===  Creating the Makefile  ==="  echo "===  Creating the Makefile  ==="
1258  echo "  setting INCLUDES"  echo "  setting INCLUDES"
1259  for i in $INCLUDEDIRS ; do  for i in $INCLUDEDIRS ; do
1260      if test -d $i ; then      if ! test -d $i ; then
1261          INCLUDES="$INCLUDES -I$i"  #       INCLUDES="$INCLUDES -I$i"
1262      else  #   else
1263          echo "Warning: can't find INCLUDEDIRS=\"$i\""          echo "Warning: can't find INCLUDEDIRS=\"$i\""
1264      fi      fi
1265  done  done
# Line 787  echo -n 'SRCFILES = '    > srclist.inc Line 1273  echo -n 'SRCFILES = '    > srclist.inc
1273  echo -n 'CSRCFILES = '   > csrclist.inc  echo -n 'CSRCFILES = '   > csrclist.inc
1274  echo -n 'F90SRCFILES = ' > f90srclist.inc  echo -n 'F90SRCFILES = ' > f90srclist.inc
1275  echo -n 'HEADERFILES = ' > hlist.inc  echo -n 'HEADERFILES = ' > hlist.inc
1276  alldirs=". $SOURCEDIRS $INCLUDEDIRS"  echo -n 'AD_FLOW_FILES = ' > ad_flow_files.inc
1277    alldirs="$SOURCEDIRS $INCLUDEDIRS ."
1278  for d in $alldirs ; do  for d in $alldirs ; do
1279      deplist=      deplist=
1280      sfiles=`( cd $d; echo *.[h,c,F] )`      sfiles=`( cd $d; echo *.[h,c,F] *.flow )`
1281      sfiles=`( echo $sfiles; cd $d; echo *.F90 )`      sfiles=`( echo $sfiles; cd $d; echo *.F90 )`
1282      for sf in $sfiles ; do      for sf in $sfiles ; do
1283          if test ! -r ".links.tmp/$sf" ; then          if test ! -r ".links.tmp/$sf" ; then
1284              if test -f "$d/$sf" ; then              if test -f "$d/$sf" ; then
1285                  extn=`echo $sf | awk -F '.' '{print $NF}'`                  case $d/$sf in
1286                  touch .links.tmp/$sf                    ./$PACKAGES_DOT_H)
1287                  deplist="$deplist $sf"                          ;;
1288                      ./AD_CONFIG.h)
1289                            ;;
1290                      ./FC_NAMEMANGLE.h)
1291                            ;;
1292                      *)
1293                            touch .links.tmp/$sf
1294                            deplist="$deplist $sf"
1295                            ;;
1296                    esac
1297                    extn=`echo $sf | $AWK -F '.' '{print $NF}'`
1298                  case $extn in                  case $extn in
1299                      F)                      F)
1300                          echo    " \\"  >> srclist.inc                          echo    " \\"  >> srclist.inc
# Line 815  for d in $alldirs ; do Line 1312  for d in $alldirs ; do
1312                          echo    " \\"  >> hlist.inc                          echo    " \\"  >> hlist.inc
1313                          echo -n " $sf" >> hlist.inc                          echo -n " $sf" >> hlist.inc
1314                          ;;                          ;;
1315                        flow)
1316                            echo    " \\"  >> ad_flow_files.inc
1317                            echo -n " $sf" >> ad_flow_files.inc
1318                            ;;
1319                  esac                  esac
1320              fi              fi
1321          fi          fi
# Line 831  echo "" >> srclist.inc Line 1332  echo "" >> srclist.inc
1332  echo "" >> csrclist.inc  echo "" >> csrclist.inc
1333  echo "" >> f90srclist.inc  echo "" >> f90srclist.inc
1334  echo "" >> hlist.inc  echo "" >> hlist.inc
1335    echo "" >> ad_flow_files.inc
1336    
1337  if test -e $MAKEFILE ; then  if test -e $MAKEFILE ; then
1338      mv -f $MAKEFILE "$MAKEFILE.bak"      mv -f $MAKEFILE "$MAKEFILE.bak"
# Line 844  echo "# by the command:" >> $MAKEFILE Line 1346  echo "# by the command:" >> $MAKEFILE
1346  echo "#    $0 $@" >> $MAKEFILE  echo "#    $0 $@" >> $MAKEFILE
1347  echo "# executed by:" >> $MAKEFILE  echo "# executed by:" >> $MAKEFILE
1348  echo "#    $USER@${THISHOSTNAME}:${THISCWD}" >> $MAKEFILE  echo "#    $USER@${THISHOSTNAME}:${THISCWD}" >> $MAKEFILE
1349    
1350    EXE_AD=$EXECUTABLE"_ad"
1351    EXE_FTL=$EXECUTABLE"_ftl"
1352    EXE_SVD=$EXECUTABLE"_svd"
1353    
1354  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
1355    #
1356    # OPTFILE="$OPTFILE"
1357  #  #
1358  # BUILDDIR     : Directory where object files are written  # BUILDDIR     : Directory where object files are written
1359  # SOURCEDIRS   : Directories containing the source (.F) files  # SOURCEDIRS   : Directories containing the source (.F) files
# Line 872  EXEDIR      = ${EXEDIR} Line 1381  EXEDIR      = ${EXEDIR}
1381  EXECUTABLE  = \$(EXEDIR)/${EXECUTABLE}  EXECUTABLE  = \$(EXEDIR)/${EXECUTABLE}
1382  TOOLSDIR    = ${TOOLSDIR}  TOOLSDIR    = ${TOOLSDIR}
1383    
1384    #eh3  new defines for the adjoint work
1385    AUTODIFF    = ${ROOTDIR}/pkg/autodiff
1386    EXE_AD      = ${EXE_AD}
1387    EXE_FTL     = ${EXE_FTL}
1388    EXE_SVD     = ${EXE_SVD}
1389    
1390    ENABLED_PACKAGES = ${ENABLED_PACKAGES}
1391    DISABLED_PACKAGES = ${DISABLED_PACKAGES}
1392    
1393    # These files are created by Makefile
1394    SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h
1395    
1396  EOF  EOF
1397    
1398  #  Note: figure out some way to add Hyades JAM libraries here  #  Note: figure out some way to add Hyades JAM libraries here
# Line 917  MAKEFILE=${MAKEFILE} Line 1438  MAKEFILE=${MAKEFILE}
1438    
1439  EOF  EOF
1440    
1441  cat srclist.inc    >> $MAKEFILE  cat srclist.inc       >> $MAKEFILE
1442  cat csrclist.inc   >> $MAKEFILE  cat csrclist.inc      >> $MAKEFILE
1443  cat f90srclist.inc >> $MAKEFILE  cat f90srclist.inc    >> $MAKEFILE
1444  cat hlist.inc      >> $MAKEFILE  cat hlist.inc         >> $MAKEFILE
1445    cat ad_flow_files.inc >> $MAKEFILE
1446    echo               >> $MAKEFILE
1447  echo 'F77FILES =  $(SRCFILES:.F=.f)'                                           >> $MAKEFILE  echo 'F77FILES =  $(SRCFILES:.F=.f)'                                           >> $MAKEFILE
1448  echo 'F90FILES =  $(F90SRCFILES:.F90=.f90)'                                    >> $MAKEFILE  echo 'F90FILES =  $(F90SRCFILES:.F90=.f90)'                                    >> $MAKEFILE
1449  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE
1450    
1451  rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc  rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc
1452    rm -f ad_flow_files.inc
1453    
1454  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
1455    
# Line 933  cat >>$MAKEFILE <<EOF Line 1457  cat >>$MAKEFILE <<EOF
1457  .SUFFIXES: .o .f .p .F .c .F90 .f90  .SUFFIXES: .o .f .p .F .c .F90 .f90
1458    
1459  all: \$(EXECUTABLE)  all: \$(EXECUTABLE)
1460  \$(EXECUTABLE): \$(OBJFILES)  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)
1461            @echo Creating \$@ ...
1462          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
1463  depend:  depend:
1464          @make links          @make links
1465          \$(MAKEDEPEND) -o .f \$(DEFINES) \$(INCLUDES) \$(SRCFILES)          \$(MAKEDEPEND) -o .f \$(DEFINES) \$(INCLUDES) \$(SRCFILES)
1466          ../../../tools/f90mkdepend >> \$(MAKEFILE)          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
1467    
1468  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES)  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
1469    
1470  small_f: \$(F77FILES) \$(F90FILES)  small_f: \$(F77FILES) \$(F90FILES)
1471    
# Line 949  output.txt: \$(EXECUTABLE) Line 1474  output.txt: \$(EXECUTABLE)
1474          @\$(EXECUTABLE) > \$@          @\$(EXECUTABLE) > \$@
1475    
1476  clean:  clean:
1477          -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl}          -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl} *.template
1478  Clean:  Clean:
1479          @make clean          @make clean
1480          @make cleanlinks          @make cleanlinks
1481          -rm -f Makefile.bak          -rm -f \$(SPECIAL_FILES)
1482            -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak
1483  CLEAN:  CLEAN:
1484          @make Clean          @make Clean
1485          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
1486          -find \$(EXEDIR) -name "*.data" -exec rm {} \;          -find \$(EXEDIR) -name "*.data" -exec rm {} \;
1487          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
1488          -rm -f \$(EXECUTABLE)          -rm -f \$(EXECUTABLE) output.txt
1489    
1490    #eh3 Makefile: makefile
1491  makefile:  makefile:
1492          ${0} $@          $THIS_SCRIPT $@
1493  cleanlinks:  cleanlinks:
1494          -find . -type l -exec rm {} \;          -find . -type l -exec rm {} \;
1495    
1496    # Special targets ($SPECIAL_FILES) which are create by make
1497    ${PACKAGES_DOT_H}:
1498            @echo Creating \$@ ...
1499            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
1500    AD_CONFIG.h:
1501            @echo Creating \$@ ...
1502            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
1503    FC_NAMEMANGLE.h:
1504            @echo Creating \$@ ...
1505            echo "$FC_NAMEMANGLE" > \$@
1506    
1507  # The normal chain of rules is (  .F - .f - .o  )  # The normal chain of rules is (  .F - .f - .o  )
1508  .F.f:  .F.f:
1509          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
# Line 984  cleanlinks: Line 1522  cleanlinks:
1522  .p.f:  .p.f:
1523          \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<          \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
1524    
1525    #=========================================
1526    #===  Automatic Differentiation Rules  ===
1527    
1528    TAMC           = ${TAMC}
1529    TAF            = ${TAF}
1530    
1531    TAF_EXTRA      = ${TAF_EXTRA}
1532    TAMC_EXTRA     = ${TAMC_EXTRA}
1533    
1534    EOF
1535    
1536    ad_vars="AD_TAMC_FLAGS AD_TAF_FLAGS"
1537    ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF_FLAGS"
1538    ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
1539    for i in $ad_vars ; do
1540        name=$i
1541        t1="t2=\$"`echo $i`
1542        eval $t1
1543        printf "%-20s = " $name >> $MAKEFILE
1544        echo $t2 >> $MAKEFILE
1545    done
1546    
1547    echo "  Add the source list for AD code generation"
1548    echo >> $MAKEFILE
1549    echo -n "AD_FILES = " >> $MAKEFILE
1550    AD_FILES=`cat ad_files`
1551    for i in $AD_FILES ; do
1552        echo    " \\" >> $MAKEFILE
1553        echo -n " $i" >> $MAKEFILE
1554    done
1555    echo >> $MAKEFILE
1556    rm -f ad_files
1557    
1558    cat >>$MAKEFILE <<EOF
1559    
1560    # ... AD ...
1561    adall: ad_taf
1562    adtaf: ad_taf_output.f
1563    adtamc: ad_tamc_output.f
1564    
1565    ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)
1566            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
1567            cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
1568            -rm -f ad_config.template
1569            @make \$(F77FILES)
1570            @make \$(AD_FLOW_FILES)
1571            cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f
1572    
1573    ad_taf_output.f: ad_input_code.f
1574            \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f
1575            cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f
1576    
1577    adtafonly:
1578            \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f
1579            cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f
1580    
1581    ad_taf: ad_taf_output.o \$(OBJFILES)
1582            \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
1583    
1584    ad_tamc_output.f: ad_input_code.f
1585            \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.f
1586            cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.f
1587    
1588    ad_tamc: ad_tamc_output.o \$(OBJFILES)
1589            \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
1590    
1591    
1592    # ... FTL ...
1593    ftlall: ftl_taf
1594    ftltaf: ftl_taf_output.f
1595    ftltamc: ftl_tamc_output.f
1596    
1597    ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)
1598            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
1599            cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
1600            -rm -f ftl_config.template
1601            @make \$(F77FILES)
1602            @make \$(AD_FLOW_FILES)
1603            cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.f
1604    
1605    ftl_taf_output.f: ftl_input_code.f
1606            \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f
1607            cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f
1608    
1609    ftltafonly:
1610            \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f
1611            cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f
1612    
1613    ftl_taf: ftl_taf_output.o \$(OBJFILES)
1614            \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
1615    
1616    ftl_tamc_output.f: ftl_input_code.f
1617            \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.f
1618            cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.f
1619    
1620    ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
1621            \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
1622    
1623    
1624    # ... SVD ...
1625    svdtaf: ad_taf_output.f ftl_taf_output.f
1626    svdall: svd_taf
1627    
1628    svd_taf: ad_taf_output.o ftl_taf_output.o \$(OBJFILES)
1629            \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
1630    
1631    
1632    #=========================================
1633    
1634  EOF  EOF
1635    
1636    if test "x$EXEHOOK" != x ; then
1637        printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE
1638    fi
1639    
1640  echo "  Making list of \"exceptions\" that need \".p\" files"  echo "  Making list of \"exceptions\" that need \".p\" files"
1641  for i in $KPPFILES ; do  for i in $KPPFILES ; do
1642      base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`      base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
# Line 1016  printf "\n\n# DO NOT DELETE\n" >> $MAKEF Line 1667  printf "\n\n# DO NOT DELETE\n" >> $MAKEF
1667    
1668  printf "\n===  Done  ===\n"  printf "\n===  Done  ===\n"
1669    
1670    # Create special header files
1671    $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
1672    if test ! -f $PACKAGES_DOT_H ; then
1673        mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
1674    else
1675        cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
1676        RETVAL=$?
1677        if test "x$RETVAL" = x0 ; then
1678            rm -f $PACKAGES_DOT_H".tmp"
1679        else
1680            mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"
1681            mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
1682        fi
1683    fi
1684    if test ! -f AD_CONFIG.h ; then
1685        $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
1686    fi
1687    
1688    
1689  #  Write the "state" for future records  #  Write the "state" for future records
1690  if test "x$DUMPSTATE" != xf ; then  if test "x$DUMPSTATE" != xf ; then
1691      echo -n "" > gm_state      echo -n "" > genmake_state
1692      for i in $gm_state ; do      for i in $gm_state ; do
1693          t1="t2=\$$i"          t1="t2=\$$i"
1694          eval $t1          eval $t1
1695          echo "$i='$t2'" >> gm_state          echo "$i='$t2'" >> genmake_state
1696      done      done
1697  fi  fi

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