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revision 1.55 by jmc, Sat Dec 6 00:34:29 2003 UTC revision 1.130 by edhill, Sun Sep 11 18:52:26 2005 UTC
# Line 37  test_for_string_in_file() { Line 37  test_for_string_in_file() {
37      grep -i "$strng" $file > /dev/null 2>&1      grep -i "$strng" $file > /dev/null 2>&1
38      RETVAL=$?      RETVAL=$?
39      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
40          echo -n "Error: In $file there is an illegal line: "          printf "Error: In $file there is an illegal line: "
41          grep -i "$strng" $file          grep -i "$strng" $file
42          return 1          return 1
43      fi      fi
# Line 67  expand_pkg_groups() { Line 67  expand_pkg_groups() {
67          done          done
68          PACKAGES=$new_packages          PACKAGES=$new_packages
69          rm -f ./p[1,2].tmp          rm -f ./p[1,2].tmp
70            return $matched
71      else      else
72          echo "Warning: can't read package groups definition file: $PKG_GROUPS"          echo "Warning: can't read package groups definition file: $PKG_GROUPS"
73      fi      fi
74  }  }
75    
76    #  Check for broken environments (eg. cygwin, MacOSX w/HFS+) that
77    #  cannot distinguish [*.F/*.F90] from [*.f/*.f90] files.
78    check_for_broken_Ff()  {
79        #  Do we have defaults for $FS and/or $FS90 ?
80        tfs=f
81        tfs9=f90
82        if test "x$FS" != x ; then
83            tfs="$FS"
84        fi
85        if test "x$FS90" != x ; then
86            tfs9="$FS90"
87        fi
88    
89        #  First check the ability to create a *.F/.f pair.
90        cat <<EOF >> genmake_hello.F
91          program hello
92          write(*,*) 'hi'
93          stop
94          end
95    EOF
96        cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1
97        RETVAL=$?
98        if test "x$RETVAL" != x0 ; then
99            if test "x$FS" = x ; then
100                FS='for'
101                FS90='fr9'
102                check_for_broken_Ff
103            else
104                cat <<EOF 2>&1
105    ERROR: Your file system cannot distinguish between *.F and *.f files
106      (fails the "cp" test) and this program cannot find a suitable
107      replacement extension.  Please try a different build environment or
108      contact the <MITgcm-support@mitgcm.org> list for help.
109    
110    EOF
111                exit -1
112            fi
113            return
114        fi
115        rm -f genmake_hello.*
116    
117        #  Check the ability of ${MAKE} and ${LN} to use the current set
118        #  of extensions.
119        cat <<EOF >> genmake_hello.F
120          program hello
121          write(*,*) 'hi'
122          stop
123          end
124    EOF
125        test -f $MAKEFILE  &&  mv -f $MAKEFILE $MAKEFILE".tst"
126        cat <<EOF >> $MAKEFILE
127    .SUFFIXES:
128    .SUFFIXES: .$tfs .F
129    .F.$tfs:
130            $LN \$< \$@
131    EOF
132        $MAKE "genmake_hello."$tfs > /dev/null 2>&1
133        RETVAL=$?
134        if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then
135            if test "x$FS" = x ; then
136                FS='for'
137                FS90='fr9'
138                check_for_broken_Ff
139            else
140                cat <<EOF 2>&1
141    ERROR: Your file system cannot distinguish between *.F and *.f files
142      (fails the "make/ln" test) and this program cannot find a suitable
143      replacement extension.  Please try a different build environment or
144      contact the <MITgcm-support@mitgcm.org> list for help.
145    
146    EOF
147                exit -1
148                return
149            fi
150        fi
151        rm -f genmake_hello.* $MAKEFILE
152        test -f $MAKEFILE".tst"  &&  mv -f $MAKEFILE".tst" $MAKEFILE
153    
154        #  If we make it here, use the extensions
155        FS=$tfs
156        FS90=$tfs9
157        return
158    }
159    
160    
161    look_for_makedepend()  {
162    
163        #  The "original" makedepend is part of the Imake system that is
164        #  most often distributed with XFree86 or with an XFree86 source
165        #  package.  As a result, many machines (eg. generic Linux) do not
166        #  have a system-default "makedepend" available.  For those
167        #  systems, we have two fall-back options:
168        #
169        #    1) a makedepend implementation shipped with the cyrus-imapd
170        #       package:  ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
171        #
172        #    2) a known-buggy xmakedpend shell script
173        #
174        #  So the choices are, in order:
175        #
176        #    1) use the user-specified program
177        #    2) use a system-wide default
178        #    3) locally build and use the cyrus implementation
179        #    4) fall back to the buggy local xmakedpend script
180        #
181        if test "x${MAKEDEPEND}" = x ; then
182            which makedepend > /dev/null 2>&1
183            RV0=$?
184            test -f $MAKEFILE  &&  mv -f $MAKEFILE $MAKEFILE".tst"
185            #  echo 'MAKEFILE="'$MAKEFILE'"'
186            cat <<EOF >> $MAKEFILE
187    #   THIS IS A TEST MAKEFILE GENERATED BY "genmake2"
188    #
189    #   Some "makedepend" implementations will die if they cannot
190    #   find a Makefile -- so this file is here to gives them an
191    #   empty one to find and parse.
192    EOF
193            cat <<EOF >> genmake_tc.f
194          program test
195          write(*,*) 'test'
196          stop
197          end
198    EOF
199            makedepend genmake_tc.f > /dev/null 2>&1
200            RV1=$?
201            test -f $MAKEFILE  &&  rm -f $MAKEFILE
202            test -f $MAKEFILE".tst"  &&  mv -f $MAKEFILE".tst" $MAKEFILE
203            if test "x${RV0}${RV1}" = x00 ; then
204                MAKEDEPEND=makedepend
205            else
206                echo "    a system-default makedepend was not found."
207                
208                #  Try to build the cyrus implementation
209                build_cyrus_makedepend
210                RETVAL=$?
211                if test "x$RETVAL" != x0 ; then
212                    MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
213                fi
214                rm -f ./genmake_cy_md
215            fi
216        else
217            #  echo "MAKEDEPEND=${MAKEDEPEND}"
218            echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1
219            RETVAL=$?
220            if test x"$RETVAL" = x0 ; then
221                build_cyrus_makedepend
222            fi
223        fi
224    }
225    
226    
227    build_cyrus_makedepend()  {
228        rm -f ./genmake_cy_md
229        (
230            cd $ROOTDIR/tools/cyrus-imapd-makedepend  \
231                &&  ./configure > /dev/null 2>&1  \
232                &&  make > /dev/null 2>&1
233            if test -x ./makedepend.exe ; then
234                $LN ./makedepend.exe ./makedepend
235            fi
236            ./makedepend ifparser.c > /dev/null 2>&1  \
237                &&  echo "true"
238        ) > ./genmake_cy_md
239        grep true ./genmake_cy_md > /dev/null 2>&1
240        RETVAL=$?
241        rm -f ./genmake_cy_md
242        if test "x$RETVAL" = x0 ; then
243            MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
244            return 0
245        else
246            echo "WARNING: unable to build cyrus-imapd-makedepend"
247            return 1
248        fi
249    }
250    
251  # Guess possible config options for this host  # Guess possible config options for this host
252  find_possible_configs()  {  find_possible_configs()  {
253    
254      tmp1=`uname`"_"`uname -m`      tmp1=`uname`"_"`uname -m`
255      tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`      tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
256      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
257      PLATFORM=`echo $tmp3 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`      tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
258        tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
259        tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'`
260        PLATFORM=$tmp3
261        echo $PLATFORM | grep cygwin > /dev/null 2>&1  &&  PLATFORM=cygwin_ia32
262      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
263      echo "  The platform appears to be:  $PLATFORM"      echo "  The platform appears to be:  $PLATFORM"
264            
# Line 98  find_possible_configs()  { Line 278  find_possible_configs()  {
278          CPP="cpp -traditional -P"          CPP="cpp -traditional -P"
279      fi      fi
280    
281      # makedepend is not always available      look_for_makedepend
282      if test "x${MAKEDEPEND}" = x ; then  
283        which makedepend >& /dev/null      #================================================================
284        RETVAL=$?      #  look for possible C compilers
285        if test "x${RETVAL}" = x1 ; then      tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc"
286           echo "    makedepend was not found. Using xmakedpend instead."      p_CC=
287           MAKEDEPEND='$(TOOLSDIR)/xmakedepend'      for c in $tmp ; do
288        fi          rm -f ./genmake_hello.c  ./genmake_hello
289            cat >> genmake_hello.c << EOF
290    #include <stdio.h>
291    int main(int argc, char **argv) {
292      printf("Hello!\n");
293      return 0;
294    }
295    EOF
296            $c -o genmake_hello genmake_hello.c > /dev/null 2>&1
297            RETVAL=$?
298            if test "x${RETVAL}" = x0 ; then
299                p_CC="$p_CC $c"
300            fi
301        done
302        rm -f ./genmake_hello.c ./genmake_hello
303        if test "x${p_CC}" = x ; then
304            cat 1>&2 <<EOF
305    
306    Error: No C compilers were found in your path.  Please specify one using:
307    
308        1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
309        2) the CC or MITGCM_CC environment variables.
310    
311    EOF
312            exit 1
313        else
314            echo "  The possible C compilers found in your path are:"
315            echo "   "$p_CC
316            if test "x$CC" = x ; then
317                CC=`echo $p_CC | $AWK '{print $1}'`
318                echo "  Setting C compiler to: "$CC
319            fi
320      fi      fi
321    
322      # look for possible fortran compilers      #================================================================
323      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95"      #  look for possible FORTRAN compilers
324        tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95 gfortran"
325      p_FC=      p_FC=
326      for c in $tmp ; do      for c in $tmp ; do
327          rm -f ./hello.f ./hello          rm -f ./hello.f ./hello
# Line 134  Error: No Fortran compilers were found i Line 346  Error: No Fortran compilers were found i
346    
347      1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),      1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
348      2) a command-line option (eg. "-fc NAME"), or      2) a command-line option (eg. "-fc NAME"), or
349      3) the MITGCM_FC environment variable.      3) the FC or MITGCM_FC environment variables.
350    
351  EOF  EOF
352          exit 1          exit 1
# Line 143  EOF Line 355  EOF
355          echo "   "$p_FC          echo "   "$p_FC
356          if test "x$FC" = x ; then          if test "x$FC" = x ; then
357              FC=`echo $p_FC | $AWK '{print $1}'`              FC=`echo $p_FC | $AWK '{print $1}'`
358                echo "  Setting FORTRAN compiler to: "$FC
359          fi          fi
360      fi      fi
361    
362      for i in $p_FC ; do      if test "x$OPTFILE" = x ; then
363          p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i          OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
364          if test -r $p_OF ; then          if test ! -r $OPTFILE ; then
365              OPTFILE=$p_OF               echo "  I looked for the file "$OPTFILE" but did not find it"
366              echo "  The options file:  $p_OF"          fi
367              echo "    appears to match so we'll use it."      fi
368              break  #    echo "  The options file:  $p_OF"
369          fi  #    echo "    appears to match so we'll use it."
370      done  #   for i in $p_FC ; do
371    #p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
372    #if test -r $p_OF ; then
373    #    OPTFILE=$p_OF
374    #    echo "  The options file:  $p_OF"
375    #    echo "    appears to match so we'll use it."
376    #    break
377    #fi
378    #   done
379      if test "x$OPTFILE" = x ; then      if test "x$OPTFILE" = x ; then
380          cat 1>&2 <<EOF          cat 1>&2 <<EOF
381    
# Line 213  get_pdepend_list()  { Line 434  get_pdepend_list()  {
434      . ./.pd_tmp      . ./.pd_tmp
435      rm -f ./.pd_tmp      rm -f ./.pd_tmp
436    
437      echo -n "PNAME = "${}      printf "PNAME = "${}
438  }  }
439    
440    
# Line 227  Usage: "$0" [OPTIONS] Line 448  Usage: "$0" [OPTIONS]
448      -help | --help | -h | --h      -help | --help | -h | --h
449            Print this help message and exit.            Print this help message and exit.
450    
451        -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
452          -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
453              Use "NAME" as the adoptfile.  By default, the file at
454              "tools/adjoint_options/adjoint_default" will be used.
455    
456      -nooptfile | --nooptfile      -nooptfile | --nooptfile
457        -optfile NAME | --optfile NAME | -of NAME | --of NAME        -optfile NAME | --optfile NAME | -of NAME | --of NAME
458        -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME        -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
# Line 251  Usage: "$0" [OPTIONS] Line 477  Usage: "$0" [OPTIONS]
477        --makefile=NAME | -mf=NAME        --makefile=NAME | -mf=NAME
478            Call the makefile "NAME".  The default is "Makefile".            Call the makefile "NAME".  The default is "Makefile".
479    
480        -makedepend NAME | -md NAME
481          --makedepend=NAME | -md=NAME
482              Use "NAME" for the MAKEDEPEND program.
483    
484      -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME      -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
485        -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME        -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
486            Specify the location of the MITgcm ROOTDIR as "NAME".            Specify the location of the MITgcm ROOTDIR as "NAME".
# Line 287  Usage: "$0" [OPTIONS] Line 517  Usage: "$0" [OPTIONS]
517            will search for a working compiler by trying a list of            will search for a working compiler by trying a list of
518            "usual suspects" such as g77, f77, etc.            "usual suspects" such as g77, f77, etc.
519    
520        -cc NAME | --cc NAME | -cc=NAME | --cc=NAME
521              Use "NAME" as the C compiler.  By default, genmake
522              will search for a working compiler by trying a list of
523              "usual suspects" such as gcc, c89, cc, etc.
524    
525      -[no]ieee | --[no]ieee      -[no]ieee | --[no]ieee
526            Do or don't use IEEE numerics.  Note that this option            Do or don't use IEEE numerics.  Note that this option
527            *only* works if it is supported by the OPTFILE that            *only* works if it is supported by the OPTFILE that
528            is being used.            is being used.
529    
530        -ts | --ts
531              Produce timing information per timestep
532    
533        -mpi | --mpi
534              Include MPI header files and link to MPI libraries
535        -mpi=PATH | --mpi=PATH
536              Include MPI header files and link to MPI libraries using MPI_ROOT
537              set to PATH. i.e. Include files from \$PATH/include, link to libraries
538              from \$PATH/lib and use binaries from \$PATH/bin.
539    
540        -bash NAME
541              Explicitly specify the Bourne or BASH shell to use
542    
543    While it is most often a single word, the "NAME" variables specified    While it is most often a single word, the "NAME" variables specified
544    above can in many cases be a space-delimited string such as:    above can in many cases be a space-delimited string such as:
545    
# Line 312  EOF Line 560  EOF
560    
561  #  Build a CPP macro to automate calling C routines from FORTRAN  #  Build a CPP macro to automate calling C routines from FORTRAN
562  get_fortran_c_namemangling()  {  get_fortran_c_namemangling()  {
563    
564        #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\""
565        if test ! "x$FC_NAMEMANGLE" = x ; then
566            return 0
567        fi
568    
569      default_nm="#define FC_NAMEMANGLE(X) X ## _"      default_nm="#define FC_NAMEMANGLE(X) X ## _"
570            
571      cat > genmake_test.c <<EOF      cat > genmake_test.c <<EOF
# Line 329  WARNING: Please contact <MITgcm-support@ Line 583  WARNING: Please contact <MITgcm-support@
583  EOF  EOF
584          return 1          return 1
585      fi      fi
586      c_tcall=`nm genmake_test.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`      c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
587      RETVAL=$?      RETVAL=$?
588      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
589          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
# Line 341  WARNING: Please contact <MITgcm-support@ Line 595  WARNING: Please contact <MITgcm-support@
595  EOF  EOF
596          return 1          return 1
597      fi      fi
598      cat > genmake_tcomp.f <<EOF      cat > genmake_tcomp.$FS <<EOF
599        subroutine tcall( string )        subroutine tcall( string )
600        character*(*) string        character*(*) string
601        call tsub( string )        call tsub( string )
602        end        end
603  EOF  EOF
604      $FC $FFLAGS $DEFINES -c genmake_tcomp.f >> genmake_warnings 2>&1      $FC $FFLAGS $DEFINES -c genmake_tcomp.$FS >> genmake_warnings 2>&1
605      RETVAL=$?      RETVAL=$?
606      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
607          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
# Line 359  WARNING: Please contact <MITgcm-support@ Line 613  WARNING: Please contact <MITgcm-support@
613  EOF  EOF
614          return 1          return 1
615      fi      fi
616      f_tcall=`nm genmake_tcomp.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`      f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
617      RETVAL=$?      RETVAL=$?
618      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
619          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
# Line 413  void FC_NAMEMANGLE(cloc) ( double *curti Line 667  void FC_NAMEMANGLE(cloc) ( double *curti
667   *curtim = *curtim/1.E6;   *curtim = *curtim/1.E6;
668  }  }
669  EOF  EOF
670      make genmake_tc_1.o >> genmake_tc.log 2>&1      make genmake_tc_1.o >> genmake_warnings 2>&1
671      RET_C=$?      RET_C=$?
672      cat <<EOF > genmake_tc_2.f      cat <<EOF > genmake_tc_2.$FS
673        program hello        program hello
674        Real*8 wtime        REAL*8 wtime
675        external cloc        external cloc
676        call cloc(wtime)        call cloc(wtime)
677        print *," HELLO WORLD", wtime        print *," HELLO WORLD", wtime
678        end program hello        end
679  EOF  EOF
680      $FC $FFLAGS -o genmake_tc genmake_tc_2.f genmake_tc_1.o >> genmake_tc.log 2>&1      $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1
681      RET_F=$?      RET_F=$?
682      test -x ./genmake_tc  &&  ./genmake_tc >> genmake_tc.log 2>&1      test -x ./genmake_tc  &&  ./genmake_tc >> genmake_warnings 2>&1
683      RETVAL=$?      RETVAL=$?
684      if test "x$RETVAL" = x0 ; then      if test "x$RETVAL" = x0 ; then
685          HAVE_CLOC=t          HAVE_CLOC=t
# Line 435  EOF Line 689  EOF
689  }  }
690    
691    
692    check_HAVE_SETRLSTK()  {
693        get_fortran_c_namemangling
694        cat <<EOF > genmake_tc_1.c
695    $FC_NAMEMANGLE
696    #include <sys/time.h>
697    #include <sys/resource.h>
698    #include <unistd.h>
699    void FC_NAMEMANGLE(setrlstk) ()
700    {
701        struct rlimit rls;
702        rls.rlim_cur = RLIM_INFINITY;
703        rls.rlim_max = RLIM_INFINITY;
704        setrlimit(RLIMIT_STACK, &rls);
705        return;
706    }
707    EOF
708        make genmake_tc_1.o >> genmake_warnings 2>&1
709        RET_C=$?
710        cat <<EOF > genmake_tc_2.$FS
711          program hello
712          external setrlstk
713          call setrlstk()
714          end
715    EOF
716        $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1
717        RET_F=$?
718        test -x ./genmake_tc  &&  ./genmake_tc >> genmake_warnings 2>&1
719        RETVAL=$?
720        if test "x$RETVAL" = x0 ; then
721            HAVE_SETRLSTK=t
722            DEFINES="$DEFINES -DHAVE_SETRLSTK"
723        fi
724        rm -f genmake_tc*
725    }
726    
727    
728    check_HAVE_STAT()  {
729        get_fortran_c_namemangling
730        cat <<EOF > genmake_tc_1.c
731    $FC_NAMEMANGLE
732    #include <stdio.h>
733    #include <stdlib.h>
734    #include <unistd.h>
735    #include <sys/stat.h>
736    #include <sys/types.h>
737    void FC_NAMEMANGLE(tfsize) ( int *nbyte )
738    {
739        char name[512];
740        struct stat astat;
741    
742        name[0] = 'a'; name[1] = '\0';
743        if (! stat(name, &astat))
744            *nbyte = (int)(astat.st_size);
745        else
746            *nbyte = -1;
747    }
748    EOF
749        make genmake_tc_1.o >> genmake_tc.log 2>&1
750        RET_C=$?
751        cat <<EOF > genmake_tc_2.$FS
752          program hello
753          integer nbyte
754          call tfsize(nbyte)
755          print *," HELLO WORLD", nbyte
756          end
757    EOF
758        $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_tc.log 2>&1
759        RET_F=$?
760        test -x ./genmake_tc  &&  ./genmake_tc >> genmake_tc.log 2>&1
761        RETVAL=$?
762        if test "x$RETVAL" = x0 ; then
763            HAVE_STAT=t
764            DEFINES="$DEFINES -DHAVE_STAT"
765        fi
766        rm -f genmake_tc*
767    }
768    
769    
770    check_netcdf_libs()  {
771        if test ! "x$SKIP_NETCDF_CHECK" = x ; then
772            return
773        fi
774        echo "" > genmake_tnc.log
775        cat <<EOF > genmake_tnc.F
776          program fgennc
777    #include "netcdf.inc"
778    EOF
779        if test ! "x$MPI" = x ; then
780            echo '#include "mpif.h"' >> genmake_tnc.F
781        fi
782        cat <<EOF >> genmake_tnc.F
783          integer iret, ncid, xid
784          iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
785          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
786          iret = nf_def_dim(ncid, 'X', 11, xid)
787          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
788          iret = nf_close(ncid)
789          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
790          end
791    EOF
792        echo "Executing:" > genmake_tnc.log
793        echo "  $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS" \
794            > genmake_tnc.log
795        RET_CPP=f
796        $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null  \
797            &&  RET_CPP=t
798        if test "x$RET_CPP" = xf ; then
799            echo "  WARNING: CPP failed to pre-process the netcdf test." \
800                > genmake_tnc.log
801            echo "    Please check that \$INCLUDES is properly set." \
802                > genmake_tnc.log
803        fi
804        echo "Executing:" > genmake_tnc.log
805        echo "  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS" > genmake_tnc.log
806        echo "  $LINK -o genmake_tnc.o $LIBS" > genmake_tnc.log
807        $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
808            &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
809        RET_COMPILE=$?
810    
811        #EH3  Remove test program execution for machines that either disallow
812        #EH3  execution or cannot support it (eg. cross-compilers)
813        #EH3
814        #EH3 test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1
815        #EH3 RETVAL=$?
816        #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
817    
818        if test "x$RET_COMPILE" = x0 ; then
819            HAVE_NETCDF=t
820        else
821            # try again with "-lnetcdf" added to the libs
822            $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null  \
823                &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
824                &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
825            RET_COMPILE=$?
826            if test "x$RET_COMPILE" = x0 ; then
827                LIBS="$LIBS -lnetcdf"
828                HAVE_NETCDF=t
829            else
830                cat genmake_tnc.log >> genmake_warnings
831            fi
832        fi
833        rm -f genmake_tnc*
834    }
835    
836    
837    
838    ###############################################################################
839    #   Sequential part of script starts here
840    ###############################################################################
841    
842  #  Set defaults here  #  Set defaults here
843  COMMANDL="$0 $@"  COMMANDL="$0 $@"
844    
# Line 442  PLATFORM= Line 846  PLATFORM=
846  LN=  LN=
847  S64=  S64=
848  KPP=  KPP=
849  FC=  #FC=
850    #CC=gcc
851    #CPP=
852  LINK=  LINK=
 # DEFINES="-DWORDLENGTH=4"  
853  DEFINES=  DEFINES=
854  PACKAGES=  PACKAGES=
855  ENABLE=  ENABLE=
856  DISABLE=  DISABLE=
857  MAKEFILE=  # MAKEFILE=
858  MAKEDEPEND=  # MAKEDEPEND=
859  PDEPEND=  PDEPEND=
860  DUMPSTATE=t  DUMPSTATE=t
861  PDEFAULT=  PDEFAULT=
862  OPTFILE=  OPTFILE=
863  INCLUDES="-I."  INCLUDES="-I. $INCLUDES"
864  FFLAGS=  FFLAGS=
865  FOPTIM=  FOPTIM=
866  CFLAGS=  CFLAGS=
867  KFLAGS1=  KFLAGS1=
868  KFLAGS2=  KFLAGS2=
869    #LDADD=
870  LIBS=  LIBS=
871  KPPFILES=  KPPFILES=
872  NOOPTFILES=  NOOPTFILES=
873  NOOPTFLAGS=  NOOPTFLAGS=
874    MPI=
875    MPIPATH=
876    TS=
877    
878  # DEFINES checked by test compilation  # DEFINES checked by test compilation or command-line
879  HAVE_SYSTEM=  HAVE_SYSTEM=
880  HAVE_FDATE=  HAVE_FDATE=
881  FC_NAMEMANGLE=  FC_NAMEMANGLE=
882  HAVE_CLOC=  HAVE_CLOC=
883    HAVE_SETRLSTK=
884    HAVE_STAT=
885    HAVE_NETCDF=
886    HAVE_ETIME=
887    IGNORE_TIME=
888    
889  MODS=  MODS=
890  TOOLSDIR=  TOOLSDIR=
891  SOURCEDIRS=  SOURCEDIRS=
892  INCLUDEDIRS=  INCLUDEDIRS=
893  STANDARDDIRS=  STANDARDDIRS="USE_THE_DEFAULT"
894    
895    G2ARGS=
896    BASH=
897  PWD=`pwd`  PWD=`pwd`
898  MAKE=make  test "x$MAKE" = x  &&  MAKE=make
899  AWK=awk  test "x$AWK" = x   &&  AWK=awk
900  THISHOSTNAME=`hostname`  THISHOST=`hostname`
901  THISCWD=`pwd`  THISCWD=`pwd`
902  THISDATE=`date`  THISDATE=`date`
903    THISUSER=`echo $USER`
904    THISVER=
905  MACHINE=`uname -a`  MACHINE=`uname -a`
906  EXECUTABLE=  EXECUTABLE=
907  EXEHOOK=  EXEHOOK=
# Line 493  IEEE= Line 911  IEEE=
911  if test "x$MITGCM_IEEE" != x ; then  if test "x$MITGCM_IEEE" != x ; then
912      IEEE=$MITGCM_IEEE      IEEE=$MITGCM_IEEE
913  fi  fi
914    FS=
915    FS90=
916    
917  AUTODIFF_PKG_USED=f  AUTODIFF_PKG_USED=f
918  AD_OPTFILE=  AD_OPTFILE=
# Line 510  TAMC_EXTRA= Line 930  TAMC_EXTRA=
930    
931  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
932  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
933  gm_s2="FC IEEE MPI JAM DUMPSTATE STANDARDDIRS"  gm_s2="FC CPP IEEE TS MPI JAM DUMPSTATE STANDARDDIRS"
934    
935  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
936  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
937  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
938  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOSTNAME THISDATE MACHINE"  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"
939  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
940  gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE"  gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"
941    
942  #  The following are all related to adjoint/tangent-linear stuff  #  The following are all related to adjoint/tangent-linear stuff
943  gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"  gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
# Line 546  for i in . $MODS ; do Line 966  for i in . $MODS ; do
966          break          break
967      fi      fi
968  done  done
969  echo -n "  getting local config information:  "  printf "  getting local config information:  "
970  if test -e $gm_local ; then  if test -f $gm_local ; then
971      echo "using $gm_local"      echo "using $gm_local"
972      . $gm_local      . $gm_local
973      # echo "DISABLE=$DISABLE"      # echo "DISABLE=$DISABLE"
# Line 556  else Line 976  else
976      echo "none found"      echo "none found"
977  fi  fi
978    
979  #  echo "$0::$1:$2:$3:$4:$5:$6:$7:"  #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
980  #OPTIONS=  #OPTIONS=
981  #n=0  #n=0
982  #for i ; do  #for i ; do
# Line 568  fi Line 988  fi
988  #done  #done
989  #parse_options  #parse_options
990  ac_prev=  ac_prev=
991  for ac_option ; do  for ac_option in "$@" ; do
992    
993        G2ARGS="$G2ARGS \"$ac_option\""
994    
995      # If the previous option needs an argument, assign it.      # If the previous option needs an argument, assign it.
996      if test -n "$ac_prev"; then      if test -n "$ac_prev"; then
# Line 611  for ac_option ; do Line 1033  for ac_option ; do
1033          -make=* | --make=* | -m=* | --m=*)          -make=* | --make=* | -m=* | --m=*)
1034              MAKE=$ac_optarg ;;              MAKE=$ac_optarg ;;
1035                    
1036            -bash | --bash)
1037                ac_prev=BASH ;;
1038            -bash=* | --bash=*)
1039                BASH=$ac_optarg ;;
1040            
1041            -makedepend | --makedepend | -md | --md)
1042                ac_prev=MAKEDEPEND ;;
1043            -makedepend=* | --makedepend=* | -md=* | --md=*)
1044                MAKEDEPEND=$ac_optarg ;;
1045            
1046          -makefile | --makefile | -ma | --ma)          -makefile | --makefile | -ma | --ma)
1047              ac_prev=MAKEFILE ;;              ac_prev=MAKEFILE ;;
1048          -makefile=* | --makefile=* | -ma=* | --ma=*)          -makefile=* | --makefile=* | -ma=* | --ma=*)
# Line 652  for ac_option ; do Line 1084  for ac_option ; do
1084  #               ac_prev=cpp ;;  #               ac_prev=cpp ;;
1085  #           -cpp=* | --cpp=*)  #           -cpp=* | --cpp=*)
1086  #               CPP=$ac_optarg ;;  #               CPP=$ac_optarg ;;
1087                        
1088            -cc | --cc)
1089                ac_prev=CC ;;
1090            -cc=* | --cc=*)
1091                CC=$ac_optarg ;;
1092            
1093          -fortran | --fortran | -fc | --fc)          -fortran | --fortran | -fc | --fc)
1094              ac_prev=FC ;;              ac_prev=FC ;;
1095          -fc=* | --fc=*)          -fc=* | --fc=*)
1096              FC=$ac_optarg ;;              FC=$ac_optarg ;;
1097                    
1098            -fs | --fs)
1099                ac_prev=FS ;;
1100            -fs=* | --fs=*)
1101                FS=$ac_optarg ;;
1102            
1103            -fs90 | --fs90)
1104                ac_prev=FS90 ;;
1105            -fs90=* | --fs90=*)
1106                FS90=$ac_optarg ;;
1107            
1108          -ieee | --ieee)          -ieee | --ieee)
1109              IEEE=true ;;              IEEE=true ;;
1110          -noieee | --noieee)          -noieee | --noieee)
1111              IEEE= ;;              IEEE= ;;
1112    
1113            -ts | --ts)
1114                TS=true ;;
1115    
1116            -mpi | --mpi)
1117                MPI=true ;;
1118            -mpi=* | --mpi=*)
1119                MPIPATH=$ac_optarg
1120                MPI=true ;;
1121                    
1122  #       -jam | --jam)  #       -jam | --jam)
1123  #           JAM=1 ;;  #           JAM=1 ;;
# Line 680  for ac_option ; do Line 1136  for ac_option ; do
1136              ac_prev=TAMC_EXTRA ;;              ac_prev=TAMC_EXTRA ;;
1137          -tamc_extra=* | --tamc_extra=*)          -tamc_extra=* | --tamc_extra=*)
1138              TAMC_EXTRA=$ac_optarg ;;              TAMC_EXTRA=$ac_optarg ;;
1139            
1140            -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1141                IGNORE_TIME="-DIGNORE_TIME" ;;
1142    
1143          -*)          -*)
1144              echo "Error: unrecognized option: "$ac_option              echo "Error: unrecognized option: "$ac_option
# Line 695  for ac_option ; do Line 1154  for ac_option ; do
1154            
1155  done  done
1156    
1157    
1158  if test -f ./.genmakerc ; then  if test -f ./.genmakerc ; then
1159      echo      echo
1160      echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""      echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
# Line 707  if test -f ./.genmakerc ; then Line 1167  if test -f ./.genmakerc ; then
1167      echo      echo
1168  fi  fi
1169    
1170    #  Find the MITgcm ${ROOTDIR}
1171  if test "x${ROOTDIR}" = x ; then  if test "x${ROOTDIR}" = x ; then
1172      if test "${PWD##/*/}" = "bin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then      tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1173        if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then
1174          ROOTDIR=".."          ROOTDIR=".."
1175      else      else
1176          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
1177              if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then              if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
1178                  ROOTDIR=$d                  ROOTDIR=$d
1179                  echo -n "Warning:  ROOTDIR was not specified but there appears to be"                  printf "Warning:  ROOTDIR was not specified but there appears to be"
1180                  echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."                  echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."
1181                  break                  break
1182              fi              fi
# Line 732  if test ! -d ${ROOTDIR} ; then Line 1194  if test ! -d ${ROOTDIR} ; then
1194      exit 1      exit 1
1195  fi  fi
1196    
1197    #  Find the MITgcm ${THISVER}
1198    if test -f "${ROOTDIR}/doc/tag-index" ; then
1199        THISVER=`grep '^checkpoint' ${ROOTDIR}/doc/tag-index | head -1`
1200    fi
1201    
1202    if test "x$MAKEFILE" = x ; then
1203        MAKEFILE="Makefile"
1204    fi
1205    
1206  echo "  getting OPTFILE information:  "  echo "  getting OPTFILE information:  "
1207  if test "x${OPTFILE}" = x ; then  if test "x${OPTFILE}" = x ; then
1208      if test "x$MITGCM_OF" = x ; then      if test "x$MITGCM_OF" = x ; then
# Line 748  if test "x$OPTFILE" != xNONE ; then Line 1219  if test "x$OPTFILE" != xNONE ; then
1219          . "$OPTFILE"          . "$OPTFILE"
1220          RETVAL=$?          RETVAL=$?
1221          if test "x$RETVAL" != x0 ; then          if test "x$RETVAL" != x0 ; then
1222              echo -n "Error: failed to source OPTFILE \"$OPTFILE\""              printf "Error: failed to source OPTFILE \"$OPTFILE\""
1223              echo "--please check that variable syntax is bash-compatible"              echo "--please check that variable syntax is bash-compatible"
1224              exit 1              exit 1
1225          fi          fi
# Line 775  if test "x${AD_OPTFILE}" != xNONE ; then Line 1246  if test "x${AD_OPTFILE}" != xNONE ; then
1246          . "$AD_OPTFILE"          . "$AD_OPTFILE"
1247          RETVAL=$?          RETVAL=$?
1248          if test "x$RETVAL" != x0 ; then          if test "x$RETVAL" != x0 ; then
1249              echo -n "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""              printf "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
1250              echo "--please check that variable syntax is bash-compatible"              echo "--please check that variable syntax is bash-compatible"
1251              exit 1              exit 1
1252          fi          fi
# Line 788  if test "x${AD_OPTFILE}" != xNONE ; then Line 1259  if test "x${AD_OPTFILE}" != xNONE ; then
1259      fi      fi
1260  fi  fi
1261    
1262  #  Check that FC, LINK, CPP, S64, LN, and MAKE are defined.  If not,  #====================================================================
1263    #  Set default values if not set by the optfile
1264    #
1265    #  Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined.  If not,
1266  #  either set defaults or complain and abort!  #  either set defaults or complain and abort!
1267    if test ! "x$BASH" = x ; then
1268        # add a trailing space so that it works within the Makefile syntax (see below)
1269        BASH="$BASH "
1270    fi
1271  if test "x$FC" = x ; then  if test "x$FC" = x ; then
1272      cat <<EOF 1>&2      cat <<EOF 1>&2
1273    
# Line 800  Error: no Fortran compiler: please speci Line 1278  Error: no Fortran compiler: please speci
1278  EOF  EOF
1279      exit 1      exit 1
1280  fi  fi
1281    if test "x$CC" = x ; then
1282        CC=cc
1283    #     cat <<EOF 1>&2
1284    # Error: no C compiler: please specify using one of the following:
1285    #   1) within the options file ("CC=...") as specified by "-of=OPTFILE"
1286    #   2) the "-cc=XXX" command-line option
1287    #   3) the "./genmake_local" file
1288    # EOF
1289    #     exit 1
1290    fi
1291  if test "x$LINK" = x ; then  if test "x$LINK" = x ; then
1292      LINK=$FC      LINK=$FC
1293  fi  fi
 if test "x$CPP" = x ; then  
     CPP="cpp"  
 fi  
1294  if test "x$MAKE" = x ; then  if test "x$MAKE" = x ; then
1295      MAKE="make"      MAKE="make"
1296  fi  fi
1297    if test "x$CPP" = x ; then
1298        CPP=cpp
1299    fi
1300    #EH3 === UGLY ===
1301    #  The following is an ugly little hack to check for $CPP in /lib/ and
1302    #  it should eventually be replaced with a more general function that
1303    #  searches a combo of the user's path and a list of "usual suspects"
1304    #  to find the correct location for binaries such as $CPP.
1305    for i in " " "/lib/" ; do
1306        echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
1307    done
1308    #EH3 === UGLY ===
1309  echo "#define A a" | $CPP > test_cpp 2>&1  echo "#define A a" | $CPP > test_cpp 2>&1
1310  RETVAL=$?  RETVAL=$?
1311  if test "x$RETVAL" != x0 ; then  if test "x$RETVAL" != x0 ; then
# Line 825  EOF Line 1322  EOF
1322  else  else
1323      rm -f test_cpp      rm -f test_cpp
1324  fi  fi
1325  if test "x$MAKEDEPEND" = x ; then  look_for_makedepend
     MAKEDEPEND=makedepend  
 fi  
1326  if test "x$LN" = x ; then  if test "x$LN" = x ; then
1327      LN="ln -s"      LN="ln -s"
1328  fi  fi
# Line 845  EOF Line 1340  EOF
1340  fi  fi
1341  rm -f genmake_test_ln genmake_tlink  rm -f genmake_test_ln genmake_tlink
1342    
1343    #  Check for broken *.F/*.f handling and fix if possible
1344    check_for_broken_Ff
1345    
1346    if test ! "x$MPI" = x ; then
1347          echo "  Turning on MPI cpp macros"
1348          DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1349    fi
1350    
1351    if test ! "x$TS" = x ; then
1352          echo "  Turning on timing per timestep"
1353          DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1354    fi
1355    
1356  printf "\n===  Checking system libraries  ===\n"  printf "\n===  Checking system libraries  ===\n"
1357  echo -n "  Do we have the system() command using $FC...  "  printf "  Do we have the system() command using $FC...  "
1358  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.$FS <<EOF
1359        program hello        program hello
1360        call system('echo hi')        call system('echo hi')
1361        end        end
1362  EOF  EOF
1363  $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1  $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1364  RETVAL=$?  RETVAL=$?
1365  if test "x$RETVAL" = x0 ; then  if test "x$RETVAL" = x0 ; then
1366      HAVE_SYSTEM=t      HAVE_SYSTEM=t
# Line 865  else Line 1372  else
1372  fi  fi
1373  rm -f genmake_tcomp*  rm -f genmake_tcomp*
1374    
1375  echo -n "  Do we have the fdate() command using $FC...  "  printf "  Do we have the fdate() command using $FC...  "
1376  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.$FS <<EOF
1377        program hello        program hello
1378        CHARACTER(128) string        CHARACTER*(128) string
1379        string = ' '        string = ' '
1380        call fdate( string )        call fdate( string )
1381        print *, string        print *, string
1382        end        end
1383  EOF  EOF
1384  $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1  $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1385  RETVAL=$?  RETVAL=$?
1386  if test "x$RETVAL" = x0 ; then  if test "x$RETVAL" = x0 ; then
1387      HAVE_FDATE=t      HAVE_FDATE=t
# Line 886  else Line 1393  else
1393  fi  fi
1394  rm -f genmake_tcomp*  rm -f genmake_tcomp*
1395    
1396  echo -n "  Can we call simple C routines (here, \"cloc()\") using $FC...  "  printf "  Do we have the etime() command using $FC...  "
1397    cat > genmake_tcomp.$FS <<EOF
1398          program hello
1399          REAL*4 ACTUAL, TARRAY(2)
1400          EXTERNAL ETIME
1401          REAL*4 ETIME
1402          actual = etime( tarray )
1403          print *, tarray
1404          end
1405    EOF
1406    $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1407    RETVAL=$?
1408    if test "x$RETVAL" = x0 ; then
1409        HAVE_ETIME=t
1410        DEFINES="$DEFINES -DHAVE_ETIME"
1411        echo "yes"
1412    else
1413        HAVE_ETIME=
1414        echo "no"
1415    fi
1416    rm -f genmake_tcomp*
1417    
1418    printf "  Can we call simple C routines (here, \"cloc()\") using $FC...  "
1419  check_HAVE_CLOC  check_HAVE_CLOC
1420  if test "x$HAVE_CLOC" != x ; then  if test "x$HAVE_CLOC" != x ; then
1421      echo "yes"      echo "yes"
# Line 895  else Line 1424  else
1424  fi  fi
1425  rm -f genmake_t*  rm -f genmake_t*
1426    
1427    printf "  Can we unlimit the stack size using $FC...  "
1428    check_HAVE_SETRLSTK
1429    if test "x$HAVE_SETRLSTK" != x ; then
1430        echo "yes"
1431    else
1432        echo "no"
1433    fi
1434    rm -f genmake_t*
1435    
1436    printf "  Can we use stat() through C calls...  "
1437    check_HAVE_STAT
1438    if test "x$HAVE_STAT" != x ; then
1439        echo "yes"
1440    else
1441        echo "no"
1442    fi
1443    rm -f genmake_t*
1444    
1445    printf "  Can we create NetCDF-enabled binaries...  "
1446    check_netcdf_libs
1447    if test "x$HAVE_NETCDF" != x ; then
1448        echo "yes"
1449    else
1450        echo "no"
1451    fi
1452    DEFINES="$DEFINES $IGNORE_TIME"
1453    
1454  printf "\n===  Setting defaults  ===\n"  printf "\n===  Setting defaults  ===\n"
1455  echo -n "  Adding MODS directories:  "  printf "  Adding MODS directories:  "
1456  for d in $MODS ; do  for d in $MODS ; do
1457      if test ! -d $d ; then      if test ! -d $d ; then
1458          echo          echo
1459          echo "Error: MODS directory \"$d\" not found!"          echo "Error: MODS directory \"$d\" not found!"
1460          exit 1          exit 1
1461      else      else
1462          echo -n " $d"          printf " $d"
1463          SOURCEDIRS="$SOURCEDIRS $d"          SOURCEDIRS="$SOURCEDIRS $d"
1464          INCLUDEDIRS="$INCLUDEDIRS $d"          INCLUDEDIRS="$INCLUDEDIRS $d"
1465      fi      fi
1466  done  done
1467  echo  echo
1468    
 if test "x$MAKEFILE" = x ; then  
     MAKEFILE="Makefile"  
 fi  
1469  if test "x${PLATFORM}" = x ; then  if test "x${PLATFORM}" = x ; then
1470      PLATFORM=$p_PLATFORM      PLATFORM=$p_PLATFORM
1471  fi  fi
1472    
1473  if test "x${EXEDIR}" = x ; then  if test "x${EXEDIR}" = x ; then
1474      if test "${PWD##/*/}" = "bin" -a -d ../exe -a $ROOTDIR = .. ; then      tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1475        if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1476          EXEDIR=../exe          EXEDIR=../exe
1477      else      else
1478          EXEDIR=.          EXEDIR=.
# Line 934  if test "x${TOOLSDIR}" = x ; then Line 1487  if test "x${TOOLSDIR}" = x ; then
1487      TOOLSDIR="$ROOTDIR/tools"      TOOLSDIR="$ROOTDIR/tools"
1488  fi  fi
1489  if test ! -d ${TOOLSDIR} ; then  if test ! -d ${TOOLSDIR} ; then
1490      echo "Error: the specified $TOOLSDIR (\"$TOOLSDIR\") does not exist!"      echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1491      exit 1      exit 1
1492  fi  fi
1493  if test "x$S64" = x ; then  if test "x$S64" = x ; then
1494      S64='$(TOOLSDIR)/set64bitConst.sh'      echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1495        RETVAL=$?
1496        if test "x${RETVAL}" = x0 ; then
1497            S64='$(TOOLSDIR)/set64bitConst.sh'
1498        else
1499            echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1500            RETVAL=$?
1501            if test "x${RETVAL}" = x0 ; then
1502                S64='$(TOOLSDIR)/set64bitConst.csh'
1503            else
1504                cat <<EOF
1505    
1506    ERROR: neither of the two default scripts:
1507    
1508        ${TOOLSDIR}/set64bitConst.sh
1509        ${TOOLSDIR}/set64bitConst.csh
1510    
1511      are working so please check paths or specify (with \$S64) a
1512      working version of this script.
1513    
1514    EOF
1515                exit 1
1516            fi
1517        fi
1518  fi  fi
1519  THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`  THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1520    
# Line 955  if test -r $ROOTDIR"/eesupp/src/Makefile Line 1531  if test -r $ROOTDIR"/eesupp/src/Makefile
1531          rm -f make_eesupp.errors          rm -f make_eesupp.errors
1532      else      else
1533          echo "Error: problem encountered while building source files in eesupp:"          echo "Error: problem encountered while building source files in eesupp:"
1534          cat make_eesupp.errors          cat make_eesupp.errors 1>&2
1535          exit 1          exit 1
1536      fi      fi
1537  fi  fi
1538    
1539    #same for exch2
1540    if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then
1541        echo "  Making source files in exch2 from  templates"
1542        ( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1
1543        RETVAL=$?
1544        if test "x${RETVAL}" = x0 ; then
1545            rm -f make_exch2.errors
1546        else
1547            echo "Error: problem encountered while building source files in exch2:"
1548            cat make_exch2.errors 1>&2
1549            exit 1
1550        fi
1551    fi
1552    
1553  printf "\n===  Determining package settings  ===\n"  printf "\n===  Determining package settings  ===\n"
1554  if  test "x${PDEPEND}" = x ; then  if  test "x${PDEPEND}" = x ; then
1555      tmp=$ROOTDIR"/pkg/pkg_depend"      tmp=$ROOTDIR"/pkg/pkg_depend"
# Line 1015  else Line 1605  else
1605          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1606          RETVAL=$?          RETVAL=$?
1607          if test "x${RETVAL}" != x0 ; then          if test "x${RETVAL}" != x0 ; then
1608              echo -n "Error: can't parse default package list "              printf "Error: can't parse default package list "
1609              echo "-- please check PDEFAULT=\"$PDEFAULT\""              echo "-- please check PDEFAULT=\"$PDEFAULT\""
1610              exit 1              exit 1
1611          fi          fi
# Line 1023  else Line 1613  else
1613              PACKAGES="$PACKAGES $i"              PACKAGES="$PACKAGES $i"
1614          done          done
1615          echo "    before group expansion packages are: $PACKAGES"          echo "    before group expansion packages are: $PACKAGES"
1616          expand_pkg_groups          RET=1
1617            while test $RET = 1 ; do expand_pkg_groups; RET=$?; done
1618          echo "    after group expansion packages are:  $PACKAGES"          echo "    after group expansion packages are:  $PACKAGES"
1619      fi      fi
1620  fi  fi
1621    
1622  echo "  applying DISABLE settings"  echo "  applying DISABLE settings"
1623    for i in $PACKAGES ; do
1624        echo $i >> ./.tmp_pack
1625    done
1626    for i in `grep  "-" ./.tmp_pack` ; do
1627        j=`echo $i | sed 's/[-]//'`
1628        DISABLE="$DISABLE $j"
1629    done
1630  pack=  pack=
1631  for p in $PACKAGES ; do  for p in $PACKAGES ; do
1632      addit="t"      addit="t"
# Line 1045  PACKAGES="$pack" Line 1643  PACKAGES="$pack"
1643  echo "  applying ENABLE settings"  echo "  applying ENABLE settings"
1644  echo "" > ./.tmp_pack  echo "" > ./.tmp_pack
1645  PACKAGES="$PACKAGES $ENABLE"  PACKAGES="$PACKAGES $ENABLE"
1646    # Test if each explicitly referenced package exists
1647  for i in $PACKAGES ; do  for i in $PACKAGES ; do
1648      if test ! -d "$ROOTDIR/pkg/$i" ; then      j=`echo $i | sed 's/[-+]//'`
1649        if test ! -d "$ROOTDIR/pkg/$j" ; then
1650          echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\""          echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\""
1651          exit 1          exit 1
1652      fi      fi
1653      echo $i >> ./.tmp_pack      echo $i >> ./.tmp_pack
1654  done  done
 pack=`cat ./.tmp_pack | sort | uniq`  
 rm -f ./.tmp_pack  
1655  PACKAGES=  PACKAGES=
1656  for i in $pack ; do  for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do
1657      PACKAGES="$PACKAGES $i"      PACKAGES="$PACKAGES $i"
1658  done  done
1659    rm -f ./.tmp_pack
1660  echo "    packages are:  $PACKAGES"  echo "    packages are:  $PACKAGES"
1661    
1662    #  Check availability of NetCDF and then either build the MNC template
1663    #  files or delete mnc from the list of available packages.
1664    echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1665    RETVAL=$?
1666    if test "x$RETVAL" = x0 ; then
1667        if test "x$HAVE_NETCDF" != xt ; then
1668            cat <<EOF
1669    
1670    *********************************************************************
1671    WARNING: the "mnc" package was enabled but tests failed to compile
1672      NetCDF applications.  Please check that:
1673    
1674      1) NetCDF is correctly installed for this compiler and
1675      2) the LIBS variable (within the "optfile") specifies the correct
1676           NetCDF library to link against.
1677    
1678      Due to this failure, the "mnc" package is now DISABLED.
1679    *********************************************************************
1680    
1681    EOF
1682            PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
1683            DISABLE="$DISABLE mnc"
1684        else
1685            ( cd $ROOTDIR"/pkg/mnc" && $MAKE testclean && $MAKE templates ) > make_mnc.errors 2>&1
1686            RETVAL=$?
1687            if test "x${RETVAL}" = x0 ; then
1688                rm -f make_mnc.errors
1689            else
1690                echo "Error: problem encountered while building source files in pkg/mnc:"
1691                cat make_mnc.errors 1>&2
1692                exit 1
1693            fi
1694        fi
1695    fi
1696    
1697  echo "  applying package dependency rules"  echo "  applying package dependency rules"
1698  ck=  ck=
1699  while test "x$ck" != xtt ; do  while test "x$ck" != xtt ; do
# Line 1124  while test "x$ck" != xtt ; do Line 1758  while test "x$ck" != xtt ; do
1758              echo "  the dependency rules for \"$dname\""              echo "  the dependency rules for \"$dname\""
1759              exit 1              exit 1
1760          fi          fi
1761          i=$(( $i + 1 ))          i=`echo "$i + 1" | bc -l`
1762            #i=$(( $i + 1 ))
1763      done      done
1764      ck=$ck"t"      ck=$ck"t"
1765  done  done
# Line 1143  for i in $PACKAGES ; do Line 1778  for i in $PACKAGES ; do
1778      fi      fi
1779  done  done
1780    
   
1781  # Create a list of #define and #undef to enable/disable packages  # Create a list of #define and #undef to enable/disable packages
1782  PACKAGES_DOT_H=PACKAGES_CONFIG.h  PACKAGES_DOT_H=PACKAGES_CONFIG.h
1783  #  The following UGLY HACK sets multiple "#undef"s and it needs to go  #  The following UGLY HACK sets multiple "#undef"s and it needs to go
# Line 1163  for n in $names ; do Line 1797  for n in $names ; do
1797              fi              fi
1798          done          done
1799          if test "x$has_pack" = xf ; then          if test "x$has_pack" = xf ; then
1800              undef=`echo "ALLOW_$n" | $AWK '{print toupper($0)}'`              undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
1801              DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"              DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
1802          fi          fi
1803      fi      fi
1804  done  done
1805  ENABLED_PACKAGES=  ENABLED_PACKAGES=
1806  for i in $PACKAGES ; do  for i in $PACKAGES ; do
1807      def=`echo "ALLOW_$i" | $AWK '{print toupper($0)}'`      def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
1808      ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"      ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
1809  #eh3 DEFINES="$DEFINES -D$def"  #eh3 DEFINES="$DEFINES -D$def"
1810    
# Line 1187  done Line 1821  done
1821    
1822  echo "  Adding STANDARDDIRS"  echo "  Adding STANDARDDIRS"
1823  BUILDDIR=${BUILDDIR:-.}  BUILDDIR=${BUILDDIR:-.}
1824  if test "x$STANDARDDIRS" = x ; then  if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
1825      STANDARDDIRS="eesupp model"      STANDARDDIRS="eesupp model"
1826  fi  fi
1827  for d in $STANDARDDIRS ; do  if test "x$STANDARDDIRS" != x ; then
1828      adr="$ROOTDIR/$d/src"      for d in $STANDARDDIRS ; do
1829      if test ! -d $adr ; then          adr="$ROOTDIR/$d/src"
1830          echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""          if test ! -d $adr ; then
1831          echo "  is correct and that you correctly specified the STANDARDDIRS option"              echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
1832          exit 1              echo "  is correct and that you correctly specified the STANDARDDIRS option"
1833      else              exit 1
1834          SOURCEDIRS="$SOURCEDIRS $adr"          else
1835      fi              SOURCEDIRS="$SOURCEDIRS $adr"
1836      adr="$ROOTDIR/$d/inc"          fi
1837      if test ! -d $adr ; then          adr="$ROOTDIR/$d/inc"
1838          echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""          if test ! -d $adr ; then
1839          echo "  is correct and that you correctly specified the STANDARDDIRS option"              echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
1840          exit 1              echo "  is correct and that you correctly specified the STANDARDDIRS option"
1841      else              exit 1
1842          INCLUDEDIRS="$INCLUDEDIRS $adr"          else
1843      fi              INCLUDEDIRS="$INCLUDEDIRS $adr"
1844  done          fi
1845        done
1846    fi
1847    
1848  echo "  Searching for *OPTIONS.h files in order to warn about the presence"  echo "  Searching for *OPTIONS.h files in order to warn about the presence"
1849  echo "    of \"#define \"-type statements that are no longer allowed:"  echo "    of \"#define \"-type statements that are no longer allowed:"
# Line 1252  for i in $SOURCEDIRS ; do Line 1888  for i in $SOURCEDIRS ; do
1888          cat $i/$j >> ad_files          cat $i/$j >> ad_files
1889      done      done
1890  done  done
1891    if test ! "x"$FS = "x.f" ; then
1892        cat ad_files | sed -e "s/\.f/.$FS/g" > ad_files_f
1893        mv -f ad_files_f ad_files
1894    fi
1895    
1896  echo  echo
1897  echo "===  Creating the Makefile  ==="  echo "===  Creating the Makefile  ==="
1898  echo "  setting INCLUDES"  echo "  setting INCLUDES"
1899  for i in $INCLUDEDIRS ; do  for i in $INCLUDEDIRS ; do
1900      if ! test -d $i ; then      if test ! -d $i ; then
 #       INCLUDES="$INCLUDES -I$i"  
 #   else  
1901          echo "Warning: can't find INCLUDEDIRS=\"$i\""          echo "Warning: can't find INCLUDEDIRS=\"$i\""
1902      fi      fi
1903  done  done
# Line 1269  rm -rf .links.tmp Line 1907  rm -rf .links.tmp
1907  mkdir .links.tmp  mkdir .links.tmp
1908  echo "# This section creates symbolic links" > srclinks.tmp  echo "# This section creates symbolic links" > srclinks.tmp
1909  echo "" >> srclinks.tmp  echo "" >> srclinks.tmp
1910  echo -n 'SRCFILES = '    > srclist.inc  printf 'SRCFILES = '    > srclist.inc
1911  echo -n 'CSRCFILES = '   > csrclist.inc  printf 'CSRCFILES = '   > csrclist.inc
1912  echo -n 'F90SRCFILES = ' > f90srclist.inc  printf 'F90SRCFILES = ' > f90srclist.inc
1913  echo -n 'HEADERFILES = ' > hlist.inc  printf 'HEADERFILES = ' > hlist.inc
1914  echo -n 'AD_FLOW_FILES = ' > ad_flow_files.inc  printf 'AD_FLOW_FILES = ' > ad_flow_files.inc
1915  alldirs="$SOURCEDIRS $INCLUDEDIRS ."  alldirs="$SOURCEDIRS $INCLUDEDIRS ."
1916  for d in $alldirs ; do  for d in $alldirs ; do
1917      deplist=      deplist=
# Line 1289  for d in $alldirs ; do Line 1927  for d in $alldirs ; do
1927                          ;;                          ;;
1928                    ./FC_NAMEMANGLE.h)                    ./FC_NAMEMANGLE.h)
1929                          ;;                          ;;
1930                      ./BUILD_INFO.h)
1931                            ;;
1932                    *)                    *)
1933                          touch .links.tmp/$sf                          touch .links.tmp/$sf
1934                          deplist="$deplist $sf"                          deplist="$deplist $sf"
1935                          ;;                          ;;
1936                  esac                  esac
1937                  extn=`echo $sf | $AWK -F '.' '{print $NF}'`                  extn=`echo $sf | $AWK -F. '{print $NF}'`
1938                  case $extn in                  case $extn in
1939                      F)                      F)
1940                          echo    " \\"  >> srclist.inc                          echo    " \\"  >> srclist.inc
1941                          echo -n " $sf" >> srclist.inc                          printf " $sf" >> srclist.inc
1942                          ;;                          ;;
1943                      F90)                      F90)
1944                          echo    " \\"  >> f90srclist.inc                          echo    " \\"  >> f90srclist.inc
1945                          echo -n " $sf" >> f90srclist.inc                          printf " $sf" >> f90srclist.inc
1946                          ;;                          ;;
1947                      c)                      c)
1948                          echo    " \\"  >> csrclist.inc                          echo    " \\"  >> csrclist.inc
1949                          echo -n " $sf" >> csrclist.inc                          printf " $sf" >> csrclist.inc
1950                          ;;                          ;;
1951                      h)                      h)
1952                          echo    " \\"  >> hlist.inc                          echo    " \\"  >> hlist.inc
1953                          echo -n " $sf" >> hlist.inc                          printf " $sf" >> hlist.inc
1954                          ;;                          ;;
1955                      flow)                      flow)
1956                          echo    " \\"  >> ad_flow_files.inc                          echo    " \\"  >> ad_flow_files.inc
1957                          echo -n " $sf" >> ad_flow_files.inc                          printf " $sf" >> ad_flow_files.inc
1958                          ;;                          ;;
1959                  esac                  esac
1960              fi              fi
# Line 1334  echo "" >> f90srclist.inc Line 1974  echo "" >> f90srclist.inc
1974  echo "" >> hlist.inc  echo "" >> hlist.inc
1975  echo "" >> ad_flow_files.inc  echo "" >> ad_flow_files.inc
1976    
1977  if test -e $MAKEFILE ; then  if test -f $MAKEFILE ; then
1978      mv -f $MAKEFILE "$MAKEFILE.bak"      mv -f $MAKEFILE "$MAKEFILE.bak"
1979  fi  fi
1980  echo "  Writing makefile: $MAKEFILE"  echo "  Writing makefile: $MAKEFILE"
# Line 1343  echo "#    $MACHINE" >> $MAKEFILE Line 1983  echo "#    $MACHINE" >> $MAKEFILE
1983  echo "# This makefile was generated automatically on" >> $MAKEFILE  echo "# This makefile was generated automatically on" >> $MAKEFILE
1984  echo "#    $THISDATE" >> $MAKEFILE  echo "#    $THISDATE" >> $MAKEFILE
1985  echo "# by the command:" >> $MAKEFILE  echo "# by the command:" >> $MAKEFILE
1986  echo "#    $0 $@" >> $MAKEFILE  echo "#    $0 $G2ARGS" >> $MAKEFILE
1987  echo "# executed by:" >> $MAKEFILE  echo "# executed by:" >> $MAKEFILE
1988  echo "#    $USER@${THISHOSTNAME}:${THISCWD}" >> $MAKEFILE  echo "#    ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
1989    
1990  EXE_AD=$EXECUTABLE"_ad"  EXE_AD=$EXECUTABLE"_ad"
1991  EXE_FTL=$EXECUTABLE"_ftl"  EXE_FTL=$EXECUTABLE"_ftl"
# Line 1391  ENABLED_PACKAGES = ${ENABLED_PACKAGES} Line 2031  ENABLED_PACKAGES = ${ENABLED_PACKAGES}
2031  DISABLED_PACKAGES = ${DISABLED_PACKAGES}  DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2032    
2033  # These files are created by Makefile  # These files are created by Makefile
2034  SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h  SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
2035    
2036  EOF  EOF
2037    
# Line 1410  KPP = ${KPP} Line 2050  KPP = ${KPP}
2050  FC = ${FC}  FC = ${FC}
2051  # Fortran compiler  # Fortran compiler
2052  F90C = ${F90C}  F90C = ${F90C}
2053    # C compiler
2054    CC = ${CC}
2055  # Link editor  # Link editor
2056  LINK = ${LINK}  LINK = ${LINK} ${LDADD}
2057    
2058  # Defines for CPP  # Defines for CPP
2059  DEFINES = ${DEFINES}  DEFINES = ${DEFINES}
# Line 1432  CFLAGS = ${CFLAGS} Line 2074  CFLAGS = ${CFLAGS}
2074  NOOPTFILES = ${NOOPTFILES}  NOOPTFILES = ${NOOPTFILES}
2075  NOOPTFLAGS = ${NOOPTFLAGS}  NOOPTFLAGS = ${NOOPTFLAGS}
2076  # Flags and libraries needed for linking  # Flags and libraries needed for linking
2077  LIBS = ${LIBS} \$(XLIBS)  LIBS = ${LIBS}
2078  # Name of the Mekfile  # Name of the Mekfile
2079  MAKEFILE=${MAKEFILE}  MAKEFILE=${MAKEFILE}
2080    
# Line 1443  cat csrclist.inc      >> $MAKEFILE Line 2085  cat csrclist.inc      >> $MAKEFILE
2085  cat f90srclist.inc    >> $MAKEFILE  cat f90srclist.inc    >> $MAKEFILE
2086  cat hlist.inc         >> $MAKEFILE  cat hlist.inc         >> $MAKEFILE
2087  cat ad_flow_files.inc >> $MAKEFILE  cat ad_flow_files.inc >> $MAKEFILE
2088  echo               >> $MAKEFILE  echo >> $MAKEFILE
2089  echo 'F77FILES =  $(SRCFILES:.F=.f)'                                           >> $MAKEFILE  echo 'F77FILES =  $(SRCFILES:.F=.'$FS')'      >> $MAKEFILE
2090  echo 'F90FILES =  $(F90SRCFILES:.F90=.f90)'                                    >> $MAKEFILE  echo 'F90FILES =  $(F90SRCFILES:.F90=.'$FS90')' >> $MAKEFILE
2091  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE
2092    echo >> $MAKEFILE
2093    echo '.SUFFIXES:' >> $MAKEFILE
2094    echo '.SUFFIXES: .o .'$FS' .p .F .c .'$FS90' .F90' >> $MAKEFILE
2095  rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc  rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc
2096  rm -f ad_flow_files.inc  rm -f ad_flow_files.inc
2097    
2098  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
2099    
 .SUFFIXES:  
 .SUFFIXES: .o .f .p .F .c .F90 .f90  
   
2100  all: \$(EXECUTABLE)  all: \$(EXECUTABLE)
2101  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)
2102          @echo Creating \$@ ...          @echo Creating \$@ ...
2103          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2104  depend:  depend:
2105          @make links          @make links
2106          \$(MAKEDEPEND) -o .f \$(DEFINES) \$(INCLUDES) \$(SRCFILES)          \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(SRCFILES)
2107          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2108            -rm -f makedepend.out
2109    
2110  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
2111    
# Line 1474  output.txt: \$(EXECUTABLE) Line 2116  output.txt: \$(EXECUTABLE)
2116          @\$(EXECUTABLE) > \$@          @\$(EXECUTABLE) > \$@
2117    
2118  clean:  clean:
2119          -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl} *.template          -rm -rf *.o *.$FS *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
2120  Clean:  Clean:
2121          @make clean          @make clean
2122          @make cleanlinks          @make cleanlinks
# Line 1485  CLEAN: Line 2127  CLEAN:
2127          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2128          -find \$(EXEDIR) -name "*.data" -exec rm {} \;          -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2129          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2130          -rm -f \$(EXECUTABLE) output.txt          -rm -f \$(EXECUTABLE) output.txt STD*
2131    
2132  #eh3 Makefile: makefile  #eh3 Makefile: makefile
2133  makefile:  makefile:
2134          $THIS_SCRIPT $@          $THIS_SCRIPT $G2ARGS
2135  cleanlinks:  cleanlinks:
2136          -find . -type l -exec rm {} \;          -find . -type l -exec rm {} \;
2137    
2138  # Special targets ($SPECIAL_FILES) which are create by make  # Special targets (SPECIAL_FILES) which are create by make
2139  ${PACKAGES_DOT_H}:  ${PACKAGES_DOT_H}:
2140          @echo Creating \$@ ...          @echo Creating \$@ ...
2141          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
2142  AD_CONFIG.h:  AD_CONFIG.h:
2143          @echo Creating \$@ ...          @echo Creating \$@ ...
2144          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
2145  FC_NAMEMANGLE.h:  FC_NAMEMANGLE.h:
2146          @echo Creating \$@ ...          @echo Creating \$@ ...
2147          echo "$FC_NAMEMANGLE" > \$@          echo "$FC_NAMEMANGLE" > \$@
2148    
2149  # The normal chain of rules is (  .F - .f - .o  )  BUILD_INFO.h:
2150  .F.f:          @echo Creating \$@ ...
2151    EOF
2152    
2153    test ! "x$THISVER" = x  && echo "       -echo \"#define THISVER '$THISVER'\" > \$@"   >> $MAKEFILE
2154    test ! "x$THISUSER" = x && echo "       -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2155    test ! "x$THISDATE" = x && echo "       -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2156    test ! "x$THISHOST" = x && echo "       -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2157    
2158    cat >>$MAKEFILE <<EOF
2159    
2160    # The normal chain of rules is (  .F - .$FS - .o  )
2161    
2162    ## This nullifies any default implicit rules concerning these two file types:
2163    ## %.o : %.F
2164    
2165    .F.$FS:
2166          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2167  .f.o:  .$FS.o:
2168          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2169  .F90.f90:  .F90.$FS90:
2170          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2171  .f90.o:  .$FS90.o:
2172          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2173  .c.o:  .c.o:
2174          \$(CC) \$(CFLAGS) -c \$<          \$(CC) \$(CFLAGS) -c \$<
2175    
2176  # Special exceptions that use the ( .F - .p - .f - .o ) rule-chain  # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2177  .F.p:  .F.p:
2178          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2179  .p.f:  .p.$FS:
2180          \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<          \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
2181    
2182  #=========================================  #=========================================
# Line 1546  done Line 2203  done
2203    
2204  echo "  Add the source list for AD code generation"  echo "  Add the source list for AD code generation"
2205  echo >> $MAKEFILE  echo >> $MAKEFILE
2206  echo -n "AD_FILES = " >> $MAKEFILE  printf "AD_FILES = " >> $MAKEFILE
2207  AD_FILES=`cat ad_files`  AD_FILES=`cat ad_files`
2208  for i in $AD_FILES ; do  for i in $AD_FILES ; do
2209      echo    " \\" >> $MAKEFILE      echo    " \\" >> $MAKEFILE
2210      echo -n " $i" >> $MAKEFILE      printf " $i" >> $MAKEFILE
2211  done  done
2212  echo >> $MAKEFILE  echo >> $MAKEFILE
2213  rm -f ad_files  rm -f ad_files
# Line 1559  cat >>$MAKEFILE <<EOF Line 2216  cat >>$MAKEFILE <<EOF
2216    
2217  # ... AD ...  # ... AD ...
2218  adall: ad_taf  adall: ad_taf
2219  adtaf: ad_taf_output.f  adtaf: ad_taf_output.$FS
2220  adtamc: ad_tamc_output.f  adtamc: ad_tamc_output.$FS
2221    
2222  ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ad_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2223          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2224          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2225          -rm -f ad_config.template          -rm -f ad_config.template
2226          @make \$(F77FILES)          @make \$(F77FILES)
2227          @make \$(AD_FLOW_FILES)          @make \$(AD_FLOW_FILES)
2228          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.$FS
2229    
2230  ad_taf_output.f: ad_input_code.f  ad_taf_output.$FS: ad_input_code.$FS
2231          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2232          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2233    
2234  adtafonly:  adtafonly:
2235          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2236          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2237    
2238  ad_taf: ad_taf_output.o \$(OBJFILES)  ad_taf: ad_taf_output.o \$(OBJFILES)
2239          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2240    
2241  ad_tamc_output.f: ad_input_code.f  ad_tamc_output.$FS: ad_input_code.$FS
2242          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.f          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
2243          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.f          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
2244    
2245  ad_tamc: ad_tamc_output.o \$(OBJFILES)  ad_tamc: ad_tamc_output.o \$(OBJFILES)
2246          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
2247    
2248    adonlyfwd:
2249            patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
2250    
2251    adtrick:
2252            patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
2253    
2254  # ... FTL ...  # ... FTL ...
2255  ftlall: ftl_taf  ftlall: ftl_taf
2256  ftltaf: ftl_taf_output.f  ftltaf: ftl_taf_output.$FS
2257  ftltamc: ftl_tamc_output.f  ftltamc: ftl_tamc_output.$FS
2258    
2259  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ftl_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2260          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2261          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2262          -rm -f ftl_config.template          -rm -f ftl_config.template
2263          @make \$(F77FILES)          @make \$(F77FILES)
2264          @make \$(AD_FLOW_FILES)          @make \$(AD_FLOW_FILES)
2265          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.f          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
2266    
2267  ftl_taf_output.f: ftl_input_code.f  ftl_taf_output.$FS: ftl_input_code.$FS
2268          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2269          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f          cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2270    
2271  ftltafonly:  ftltafonly:
2272          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2273          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f          cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2274    
2275  ftl_taf: ftl_taf_output.o \$(OBJFILES)  ftl_taf: ftl_taf_output.o \$(OBJFILES)
2276          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
2277    
2278  ftl_tamc_output.f: ftl_input_code.f  ftl_tamc_output.$FS: ftl_input_code.$FS
2279          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.f          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
2280          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.f          cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
2281    
2282  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
2283          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
2284    
2285    
2286  # ... SVD ...  # ... SVD ...
2287  svdtaf: ad_taf_output.f ftl_taf_output.f  svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
2288  svdall: svd_taf          @echo "--->>> Only ran TAF to generate SVD code!    <<<---"
2289            @echo "--->>> Do make svdall afterwards to compile. <<<---"
2290    svdall: svd_touch svd_taf
2291    
2292  svd_taf: ad_taf_output.o ftl_taf_output.o \$(OBJFILES)  svd_taf: \$(OBJFILES)
2293          \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)          \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
2294    
2295            @echo "--->>> Only COMPILE svd code! <<<---"
2296            @echo "--->>> Assumes you previously <<<---"
2297            @echo "--->>> did make svdtaf        <<<---"
2298    
2299    svd_touch:
2300            @echo "--->>> Only COMPILE svd code! <<<---"
2301            @echo "--->>> Assumes you previously <<<---"
2302            @echo "--->>> did make svdtaf        <<<---"
2303            touch ad_taf_output.$FS ftl_taf_output.$FS
2304            \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
2305            \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
2306            @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2307            cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2308            -rm -f ftl_config.template
2309    
2310  #=========================================  #=========================================
2311    
# Line 1644  for i in $KPPFILES ; do Line 2322  for i in $KPPFILES ; do
2322      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
2323          echo "Error: unable to add file \"$i\" to the exceptions list"          echo "Error: unable to add file \"$i\" to the exceptions list"
2324      fi      fi
2325      echo "$base.f: $base.p" >> $MAKEFILE      echo "$base.$FS: $base.p" >> $MAKEFILE
2326  done  done
2327    
2328  echo "  Making list of NOOPTFILES"  echo "  Making list of NOOPTFILES"
# Line 1654  for i in $NOOPTFILES ; do Line 2332  for i in $NOOPTFILES ; do
2332      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
2333          echo "Error: unable to add file \"$i\" to the exceptions list"          echo "Error: unable to add file \"$i\" to the exceptions list"
2334      fi      fi
2335      echo "$base.o: $base.f" >> $MAKEFILE      echo "$base.o: $base.$FS" >> $MAKEFILE
2336      printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE      printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE
2337  done  done
2338    
# Line 1668  printf "\n\n# DO NOT DELETE\n" >> $MAKEF Line 2346  printf "\n\n# DO NOT DELETE\n" >> $MAKEF
2346  printf "\n===  Done  ===\n"  printf "\n===  Done  ===\n"
2347    
2348  # Create special header files  # Create special header files
2349  $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"  $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
2350  if test ! -f $PACKAGES_DOT_H ; then  if test ! -f $PACKAGES_DOT_H ; then
2351      mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H      mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
2352  else  else
2353      cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H      cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
2354      RETVAL=$?      RETVAL=$?
2355      if test "x$RETVAL" = x0 ; then      if test "x$RETVAL" = x0 ; then
2356          rm -f $PACKAGES_DOT_H".tmp"          rm -f $PACKAGES_DOT_H".tmp"
# Line 1682  else Line 2360  else
2360      fi      fi
2361  fi  fi
2362  if test ! -f AD_CONFIG.h ; then  if test ! -f AD_CONFIG.h ; then
2363      $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h      $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
2364  fi  fi
2365    
2366    
2367  #  Write the "state" for future records  #  Write the "state" for future records
2368  if test "x$DUMPSTATE" != xf ; then  if test "x$DUMPSTATE" != xf ; then
2369      echo -n "" > genmake_state      printf "" > genmake_state
2370      for i in $gm_state ; do      for i in $gm_state ; do
2371          t1="t2=\$$i"          t1="t2=\$$i"
2372          eval $t1          eval $t1

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