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revision 1.53 by edhill, Fri Dec 5 15:08:33 2003 UTC revision 1.104 by edhill, Tue Oct 5 16:10:31 2004 UTC
# Line 37  test_for_string_in_file() { Line 37  test_for_string_in_file() {
37      grep -i "$strng" $file > /dev/null 2>&1      grep -i "$strng" $file > /dev/null 2>&1
38      RETVAL=$?      RETVAL=$?
39      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
40          echo -n "Error: In $file there is an illegal line: "          printf "Error: In $file there is an illegal line: "
41          grep -i "$strng" $file          grep -i "$strng" $file
42          return 1          return 1
43      fi      fi
# Line 67  expand_pkg_groups() { Line 67  expand_pkg_groups() {
67          done          done
68          PACKAGES=$new_packages          PACKAGES=$new_packages
69          rm -f ./p[1,2].tmp          rm -f ./p[1,2].tmp
70            return $matched
71      else      else
72          echo "Warning: can't read package groups definition file: $PKG_GROUPS"          echo "Warning: can't read package groups definition file: $PKG_GROUPS"
73      fi      fi
74  }  }
75    
76    #  Check for broken environments (eg. cygwin, MacOSX w/HFS+) that
77    #  cannot distinguish [*.F/*.F90] from [*.f/*.f90] files.
78    check_for_broken_Ff()  {
79        #  Do we have defaults for $FS and/or $FS90 ?
80        tfs=f
81        tfs9=f90
82        if test "x$FS" != x ; then
83            tfs="$FS"
84        fi
85        if test "x$FS90" != x ; then
86            tfs9="$FS90"
87        fi
88    
89        #  First check the ability to create a *.F/.f pair.
90        cat <<EOF >> genmake_hello.F
91          program hello
92          write(*,*) 'hi'
93          stop
94          end
95    EOF
96        cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1
97        RETVAL=$?
98        if test "x$RETVAL" != x0 ; then
99            if test "x$FS" = x ; then
100                FS='for'
101                FS90='fr9'
102                check_for_broken_Ff
103            else
104                cat <<EOF 2>&1
105    ERROR: Your file system cannot distinguish between *.F and *.f files
106      (fails the "cp" test) and this program cannot find a suitable
107      replacement extension.  Please try a different build environment or
108      contact the <MITgcm-support@mitgcm.org> list for help.
109    
110    EOF
111                exit -1
112            fi
113            return
114        fi
115        rm -f genmake_hello.*
116    
117        #  Check the ability of ${MAKE} and ${LN} to use the current set
118        #  of extensions.
119        cat <<EOF >> genmake_hello.F
120          program hello
121          write(*,*) 'hi'
122          stop
123          end
124    EOF
125        test -f Makefile  &&  mv -f Makefile Makefile.bak
126        cat <<EOF >> Makefile
127    .SUFFIXES:
128    .SUFFIXES: .$tfs .F
129    .F.$tfs:
130            $LN \$< \$@
131    EOF
132        $MAKE "genmake_hello."$tfs > /dev/null 2>&1
133        RETVAL=$?
134        if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then
135            if test "x$FS" = x ; then
136                FS='for'
137                FS90='fr9'
138                check_for_broken_Ff
139            else
140                cat <<EOF 2>&1
141    ERROR: Your file system cannot distinguish between *.F and *.f files
142      (fails the "make/ln" test) and this program cannot find a suitable
143      replacement extension.  Please try a different build environment or
144      contact the <MITgcm-support@mitgcm.org> list for help.
145    
146    EOF
147                exit -1
148                return
149            fi
150        fi
151        rm -f genmake_hello.* Makefile
152        test -f Makefile  &&  mv -f Makefile.bak Makefile
153    
154        #  If we make it here, use the extensions
155        FS=$tfs
156        FS90=$tfs9
157        return
158    }
159    
160    
161    look_for_makedepend()  {
162    
163        #  The "original" makedepend is part of the Imake system that is
164        #  most often distributed with XFree86 or with an XFree86 source
165        #  package.  As a result, many machines (eg. generic Linux) do not
166        #  have a system-default "makedepend" available.  For those
167        #  systems, we have two fall-back options:
168        #
169        #    1) a makedepend implementation shipped with the cyrus-imapd
170        #       package:  ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
171        #
172        #    2) a known-buggy xmakedpend shell script
173        #
174        #  So the choices are, in order:
175        #
176        #    1) use the user-specified program
177        #    2) use a system-wide default
178        #    3) locally build and use the cyrus implementation
179        #    4) fall back to the buggy local xmakedpend script
180        #
181        if test "x${MAKEDEPEND}" = x ; then
182            which makedepend > /dev/null 2>&1
183            RV0=$?
184            cat <<EOF >> genmake_tc.f
185          program test
186          write(*,*) 'test'
187          stop
188          end
189    EOF
190            makedepend genmake_tc.f > /dev/null 2>&1
191            RV1=$?
192            if test "x${RV0}${RV1}" = x00 ; then
193                MAKEDEPEND=makedepend
194            else
195                echo "    a system-default makedepend was not found."
196                
197                #  Try to build the cyrus implementation
198                build_cyrus_makedepend
199                RETVAL=$?
200                if test "x$RETVAL" != x0 ; then
201                    MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
202                fi
203                rm -f ./genmake_cy_md
204            fi
205        else
206            #  echo "MAKEDEPEND=${MAKEDEPEND}"
207            echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1
208            RETVAL=$?
209            if test x"$RETVAL" = x0 ; then
210                build_cyrus_makedepend
211            fi
212        fi
213    }
214    
215    
216    build_cyrus_makedepend()  {
217        rm -f ./genmake_cy_md
218        (
219            cd $ROOTDIR/tools/cyrus-imapd-makedepend  \
220                &&  ./configure > /dev/null 2>&1  \
221                &&  make > /dev/null 2>&1
222            if test -x ./makedepend.exe ; then
223                $LN ./makedepend.exe ./makedepend
224            fi
225            ./makedepend ifparser.c > /dev/null 2>&1  \
226                &&  echo "true"
227        ) > ./genmake_cy_md
228        grep true ./genmake_cy_md > /dev/null 2>&1
229        RETVAL=$?
230        rm -f ./genmake_cy_md
231        if test "x$RETVAL" = x0 ; then
232            MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
233            return 0
234        else
235            echo "WARNING: unable to build cyrus-imapd-makedepend"
236            return 1
237        fi
238    }
239    
240  # Guess possible config options for this host  # Guess possible config options for this host
241  find_possible_configs()  {  find_possible_configs()  {
242    
243      tmp1=`uname`"_"`uname -m`      tmp1=`uname`"_"`uname -m`
244      tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`      tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
245      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
246      PLATFORM=`echo $tmp3 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`      tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
247        tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
248        tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'`
249        PLATFORM=$tmp3
250        echo $PLATFORM | grep cygwin > /dev/null 2>&1  &&  PLATFORM=cygwin_ia32
251      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
252      echo "  The platform appears to be:  $PLATFORM"      echo "  The platform appears to be:  $PLATFORM"
253            
# Line 98  find_possible_configs()  { Line 267  find_possible_configs()  {
267          CPP="cpp -traditional -P"          CPP="cpp -traditional -P"
268      fi      fi
269    
270      # makedepend is not always available      look_for_makedepend
271      if test "x${MAKEDEPEND}" = x ; then  
272        which makedepend >& /dev/null      #================================================================
273        RETVAL=$?      #  look for possible C compilers
274        if test "x${RETVAL}" = x1 ; then      tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc"
275           echo "    makedepend was not found. Using xmakedpend instead."      p_CC=
276           MAKEDEPEND='$(TOOLSDIR)/xmakedepend'      for c in $tmp ; do
277        fi          rm -f ./genmake_hello.c  ./genmake_hello
278            cat >> genmake_hello.c << EOF
279    #include <stdio.h>
280    int main(int argc, char **argv) {
281      printf("Hello!\n");
282      return 0;
283    }
284    EOF
285            $c -o genmake_hello genmake_hello.c > /dev/null 2>&1
286            RETVAL=$?
287            if test "x${RETVAL}" = x0 ; then
288                p_CC="$p_CC $c"
289            fi
290        done
291        rm -f ./genmake_hello.c ./genmake_hello
292        if test "x${p_CC}" = x ; then
293            cat 1>&2 <<EOF
294    
295    Error: No C compilers were found in your path.  Please specify one using:
296    
297        1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
298        2) the CC or MITGCM_CC environment variables.
299    
300    EOF
301            exit 1
302        else
303            echo "  The possible C compilers found in your path are:"
304            echo "   "$p_CC
305            if test "x$CC" = x ; then
306                CC=`echo $p_CC | $AWK '{print $1}'`
307                echo "  Setting C compiler to: "$CC
308            fi
309      fi      fi
310    
311      # look for possible fortran compilers      #================================================================
312        #  look for possible FORTRAN compilers
313      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95"      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95"
314      p_FC=      p_FC=
315      for c in $tmp ; do      for c in $tmp ; do
# Line 134  Error: No Fortran compilers were found i Line 335  Error: No Fortran compilers were found i
335    
336      1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),      1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
337      2) a command-line option (eg. "-fc NAME"), or      2) a command-line option (eg. "-fc NAME"), or
338      3) the MITGCM_FC environment variable.      3) the FC or MITGCM_FC environment variables.
339    
340  EOF  EOF
341          exit 1          exit 1
# Line 143  EOF Line 344  EOF
344          echo "   "$p_FC          echo "   "$p_FC
345          if test "x$FC" = x ; then          if test "x$FC" = x ; then
346              FC=`echo $p_FC | $AWK '{print $1}'`              FC=`echo $p_FC | $AWK '{print $1}'`
347                echo "  Setting FORTRAN compiler to: "$FC
348          fi          fi
349      fi      fi
350    
351      for i in $p_FC ; do      if test "x$OPTFILE" = x ; then
352          p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i          OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
353          if test -r $p_OF ; then          if test ! -r $OPTFILE ; then
354              OPTFILE=$p_OF               echo "  I looked for the file "$OPTFILE" but did not find it"
355              echo "  The options file:  $p_OF"          fi
356              echo "    appears to match so we'll use it."      fi
357              break  #    echo "  The options file:  $p_OF"
358          fi  #    echo "    appears to match so we'll use it."
359      done  #   for i in $p_FC ; do
360    #p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
361    #if test -r $p_OF ; then
362    #    OPTFILE=$p_OF
363    #    echo "  The options file:  $p_OF"
364    #    echo "    appears to match so we'll use it."
365    #    break
366    #fi
367    #   done
368      if test "x$OPTFILE" = x ; then      if test "x$OPTFILE" = x ; then
369          cat 1>&2 <<EOF          cat 1>&2 <<EOF
370    
# Line 213  get_pdepend_list()  { Line 423  get_pdepend_list()  {
423      . ./.pd_tmp      . ./.pd_tmp
424      rm -f ./.pd_tmp      rm -f ./.pd_tmp
425    
426      echo -n "PNAME = "${}      printf "PNAME = "${}
427  }  }
428    
429    
# Line 227  Usage: "$0" [OPTIONS] Line 437  Usage: "$0" [OPTIONS]
437      -help | --help | -h | --h      -help | --help | -h | --h
438            Print this help message and exit.            Print this help message and exit.
439    
440        -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
441          -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
442              Use "NAME" as the adoptfile.  By default, the file at
443              "tools/adjoint_options/adjoint_default" will be used.
444    
445      -nooptfile | --nooptfile      -nooptfile | --nooptfile
446        -optfile NAME | --optfile NAME | -of NAME | --of NAME        -optfile NAME | --optfile NAME | -of NAME | --of NAME
447        -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME        -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
# Line 251  Usage: "$0" [OPTIONS] Line 466  Usage: "$0" [OPTIONS]
466        --makefile=NAME | -mf=NAME        --makefile=NAME | -mf=NAME
467            Call the makefile "NAME".  The default is "Makefile".            Call the makefile "NAME".  The default is "Makefile".
468    
469        -makedepend NAME | -md NAME
470          --makedepend=NAME | -md=NAME
471              Use "NAME" for the MAKEDEPEND program.
472    
473      -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME      -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
474        -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME        -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
475            Specify the location of the MITgcm ROOTDIR as "NAME".            Specify the location of the MITgcm ROOTDIR as "NAME".
# Line 287  Usage: "$0" [OPTIONS] Line 506  Usage: "$0" [OPTIONS]
506            will search for a working compiler by trying a list of            will search for a working compiler by trying a list of
507            "usual suspects" such as g77, f77, etc.            "usual suspects" such as g77, f77, etc.
508    
509        -cc NAME | --cc NAME | -cc=NAME | --cc=NAME
510              Use "NAME" as the C compiler.  By default, genmake
511              will search for a working compiler by trying a list of
512              "usual suspects" such as gcc, c89, cc, etc.
513    
514      -[no]ieee | --[no]ieee      -[no]ieee | --[no]ieee
515            Do or don't use IEEE numerics.  Note that this option            Do or don't use IEEE numerics.  Note that this option
516            *only* works if it is supported by the OPTFILE that            *only* works if it is supported by the OPTFILE that
517            is being used.            is being used.
518    
519        -mpi | --mpi
520              Include MPI header files and link to MPI libraries
521        -mpi=PATH | --mpi=PATH
522              Include MPI header files and link to MPI libraries using MPI_ROOT
523              set to PATH. i.e. Include files from \$PATH/include, link to libraries
524              from \$PATH/lib and use binaries from \$PATH/bin.
525    
526        -bash NAME
527              Explicitly specify the Bourne or BASH shell to use
528    
529    While it is most often a single word, the "NAME" variables specified    While it is most often a single word, the "NAME" variables specified
530    above can in many cases be a space-delimited string such as:    above can in many cases be a space-delimited string such as:
531    
# Line 312  EOF Line 546  EOF
546    
547  #  Build a CPP macro to automate calling C routines from FORTRAN  #  Build a CPP macro to automate calling C routines from FORTRAN
548  get_fortran_c_namemangling()  {  get_fortran_c_namemangling()  {
549    
550        #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\""
551        if test ! "x$FC_NAMEMANGLE" = x ; then
552            return 0
553        fi
554    
555      default_nm="#define FC_NAMEMANGLE(X) X ## _"      default_nm="#define FC_NAMEMANGLE(X) X ## _"
556            
557      cat > genmake_test.c <<EOF      cat > genmake_test.c <<EOF
# Line 329  WARNING: Please contact <MITgcm-support@ Line 569  WARNING: Please contact <MITgcm-support@
569  EOF  EOF
570          return 1          return 1
571      fi      fi
572      c_tcall=`nm genmake_test.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`      c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
573      RETVAL=$?      RETVAL=$?
574      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
575          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
# Line 359  WARNING: Please contact <MITgcm-support@ Line 599  WARNING: Please contact <MITgcm-support@
599  EOF  EOF
600          return 1          return 1
601      fi      fi
602      f_tcall=`nm genmake_tcomp.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`      f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
603      RETVAL=$?      RETVAL=$?
604      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
605          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
# Line 435  EOF Line 675  EOF
675  }  }
676    
677    
678    check_netcdf_libs()  {
679        echo "" > genmake_tnc.log
680        cat <<EOF > genmake_tnc.for
681          program fgennc
682    #include "netcdf.inc"
683          integer iret, ncid, xid
684          iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
685          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
686          iret = nf_def_dim(ncid, 'X', 11, xid)
687          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
688          iret = nf_close(ncid)
689          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
690          end
691    EOF
692        #echo "$CPP $DEFINES $INCLUDES genmake_tnc.for > genmake_tnc.f"
693        #echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.f"
694        #echo "$LINK -o genmake_tnc.o $LIBS"
695        $CPP $DEFINES $INCLUDES genmake_tnc.for > genmake_tnc.f 2>/dev/null  \
696            &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.f >> genmake_tnc.log 2>&1  \
697            &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
698        RET_COMPILE=$?
699    
700        #EH3  Remove test program execution for machines that either disallow
701        #EH3  execution or cannot support it (eg. cross-compilers)
702        #EH3
703        #EH3 test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1
704        #EH3 RETVAL=$?
705        #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
706    
707        if test "x$RET_COMPILE" = x0 ; then
708            HAVE_NETCDF=t
709        else
710            # try again with "-lnetcdf" added to the libs
711            $CPP $DEFINES $INCLUDES genmake_tnc.for > genmake_tnc.f 2>/dev/null  \
712                &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.f >> genmake_tnc.log 2>&1  \
713                &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
714            RET_COMPILE=$?
715            if test "x$RET_COMPILE" = x0 ; then
716                LIBS="$LIBS -lnetcdf"
717                HAVE_NETCDF=t
718            else
719                cat genmake_tnc.log >> genmake_warnings
720            fi
721        fi
722        rm -f genmake_tnc*
723    }
724    
725    
726    
727    ###############################################################################
728    #   Sequential part of script starts here
729    ###############################################################################
730    
731  #  Set defaults here  #  Set defaults here
732  COMMANDL="$0 $@"  COMMANDL="$0 $@"
733    
# Line 443  LN= Line 736  LN=
736  S64=  S64=
737  KPP=  KPP=
738  FC=  FC=
739    #CC=gcc
740    CPP=
741  LINK=  LINK=
 # DEFINES="-DWORDLENGTH=4"  
742  DEFINES=  DEFINES=
743  PACKAGES=  PACKAGES=
744  ENABLE=  ENABLE=
745  DISABLE=  DISABLE=
746  MAKEFILE=  MAKEFILE=
747  MAKEDEPEND=  #MAKEDEPEND=
748  PDEPEND=  PDEPEND=
749  DUMPSTATE=t  DUMPSTATE=t
750  PDEFAULT=  PDEFAULT=
# Line 461  FOPTIM= Line 755  FOPTIM=
755  CFLAGS=  CFLAGS=
756  KFLAGS1=  KFLAGS1=
757  KFLAGS2=  KFLAGS2=
758    #LDADD=
759  LIBS=  LIBS=
760  KPPFILES=  KPPFILES=
761  NOOPTFILES=  NOOPTFILES=
762  NOOPTFLAGS=  NOOPTFLAGS=
763    MPI=
764    MPIPATH=
765    
766  # DEFINES checked by test compilation  # DEFINES checked by test compilation
767  HAVE_SYSTEM=  HAVE_SYSTEM=
768  HAVE_FDATE=  HAVE_FDATE=
769  FC_NAMEMANGLE=  FC_NAMEMANGLE=
770  HAVE_CLOC=  HAVE_CLOC=
771    HAVE_NETCDF=
772    HAVE_ETIME=
773    
774  MODS=  MODS=
775  TOOLSDIR=  TOOLSDIR=
776  SOURCEDIRS=  SOURCEDIRS=
777  INCLUDEDIRS=  INCLUDEDIRS=
778  STANDARDDIRS=  STANDARDDIRS="USE_THE_DEFAULT"
779    
780    G2ARGS=
781    BASH=
782  PWD=`pwd`  PWD=`pwd`
783  MAKE=make  MAKE=make
784  AWK=awk  AWK=awk
785  THISHOSTNAME=`hostname`  THISHOST=`hostname`
786  THISCWD=`pwd`  THISCWD=`pwd`
787  THISDATE=`date`  THISDATE=`date`
788    THISUSER=`echo $USER`
789    THISVER=
790  MACHINE=`uname -a`  MACHINE=`uname -a`
791  EXECUTABLE=  EXECUTABLE=
792  EXEHOOK=  EXEHOOK=
# Line 493  IEEE= Line 796  IEEE=
796  if test "x$MITGCM_IEEE" != x ; then  if test "x$MITGCM_IEEE" != x ; then
797      IEEE=$MITGCM_IEEE      IEEE=$MITGCM_IEEE
798  fi  fi
799    FS=
800    FS90=
801    
802  AUTODIFF_PKG_USED=f  AUTODIFF_PKG_USED=f
803  AD_OPTFILE=  AD_OPTFILE=
# Line 510  TAMC_EXTRA= Line 815  TAMC_EXTRA=
815    
816  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
817  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
818  gm_s2="FC IEEE MPI JAM DUMPSTATE STANDARDDIRS"  gm_s2="FC CPP IEEE MPI JAM DUMPSTATE STANDARDDIRS"
819    
820  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
821  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
822  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
823  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOSTNAME THISDATE MACHINE"  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"
824  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
825  gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE"  gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"
826    
827  #  The following are all related to adjoint/tangent-linear stuff  #  The following are all related to adjoint/tangent-linear stuff
828  gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"  gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
# Line 546  for i in . $MODS ; do Line 851  for i in . $MODS ; do
851          break          break
852      fi      fi
853  done  done
854  echo -n "  getting local config information:  "  printf "  getting local config information:  "
855  if test -e $gm_local ; then  if test -f $gm_local ; then
856      echo "using $gm_local"      echo "using $gm_local"
857      . $gm_local      . $gm_local
858      # echo "DISABLE=$DISABLE"      # echo "DISABLE=$DISABLE"
# Line 556  else Line 861  else
861      echo "none found"      echo "none found"
862  fi  fi
863    
864  #  echo "$0::$1:$2:$3:$4:$5:$6:$7:"  #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
865  #OPTIONS=  #OPTIONS=
866  #n=0  #n=0
867  #for i ; do  #for i ; do
# Line 568  fi Line 873  fi
873  #done  #done
874  #parse_options  #parse_options
875  ac_prev=  ac_prev=
876  for ac_option ; do  for ac_option in "$@" ; do
877    
878        G2ARGS="$G2ARGS \"$ac_option\""
879    
880      # If the previous option needs an argument, assign it.      # If the previous option needs an argument, assign it.
881      if test -n "$ac_prev"; then      if test -n "$ac_prev"; then
# Line 611  for ac_option ; do Line 918  for ac_option ; do
918          -make=* | --make=* | -m=* | --m=*)          -make=* | --make=* | -m=* | --m=*)
919              MAKE=$ac_optarg ;;              MAKE=$ac_optarg ;;
920                    
921            -bash | --bash)
922                ac_prev=BASH ;;
923            -bash=* | --bash=*)
924                BASH=$ac_optarg ;;
925            
926            -makedepend | --makedepend | -md | --md)
927                ac_prev=MAKEDEPEND ;;
928            -makedepend=* | --makedepend=* | -md=* | --md=*)
929                MAKEDEPEND=$ac_optarg ;;
930            
931          -makefile | --makefile | -ma | --ma)          -makefile | --makefile | -ma | --ma)
932              ac_prev=MAKEFILE ;;              ac_prev=MAKEFILE ;;
933          -makefile=* | --makefile=* | -ma=* | --ma=*)          -makefile=* | --makefile=* | -ma=* | --ma=*)
# Line 652  for ac_option ; do Line 969  for ac_option ; do
969  #               ac_prev=cpp ;;  #               ac_prev=cpp ;;
970  #           -cpp=* | --cpp=*)  #           -cpp=* | --cpp=*)
971  #               CPP=$ac_optarg ;;  #               CPP=$ac_optarg ;;
972                        
973            -cc | --cc)
974                ac_prev=CC ;;
975            -cc=* | --cc=*)
976                CC=$ac_optarg ;;
977            
978          -fortran | --fortran | -fc | --fc)          -fortran | --fortran | -fc | --fc)
979              ac_prev=FC ;;              ac_prev=FC ;;
980          -fc=* | --fc=*)          -fc=* | --fc=*)
981              FC=$ac_optarg ;;              FC=$ac_optarg ;;
982                    
983            -fs | --fs)
984                ac_prev=FS ;;
985            -fs=* | --fs=*)
986                FS=$ac_optarg ;;
987            
988            -fs90 | --fs90)
989                ac_prev=FS90 ;;
990            -fs90=* | --fs90=*)
991                FS90=$ac_optarg ;;
992            
993          -ieee | --ieee)          -ieee | --ieee)
994              IEEE=true ;;              IEEE=true ;;
995          -noieee | --noieee)          -noieee | --noieee)
996              IEEE= ;;              IEEE= ;;
997    
998            -mpi | --mpi)
999                MPI=true ;;
1000            -mpi=* | --mpi=*)
1001                MPIPATH=$ac_optarg
1002                MPI=true ;;
1003                    
1004  #       -jam | --jam)  #       -jam | --jam)
1005  #           JAM=1 ;;  #           JAM=1 ;;
# Line 707  if test -f ./.genmakerc ; then Line 1045  if test -f ./.genmakerc ; then
1045      echo      echo
1046  fi  fi
1047    
1048    #  Find the MITgcm ${ROOTDIR}
1049  if test "x${ROOTDIR}" = x ; then  if test "x${ROOTDIR}" = x ; then
1050      if test "${PWD##/*/}" = "bin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then      tmp=`echo $PWD | sed -e 's/\// /g' | awk '{print $NR}'`
1051        if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then
1052          ROOTDIR=".."          ROOTDIR=".."
1053      else      else
1054          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
1055              if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then              if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
1056                  ROOTDIR=$d                  ROOTDIR=$d
1057                  echo -n "Warning:  ROOTDIR was not specified but there appears to be"                  printf "Warning:  ROOTDIR was not specified but there appears to be"
1058                  echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."                  echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."
1059                  break                  break
1060              fi              fi
# Line 732  if test ! -d ${ROOTDIR} ; then Line 1072  if test ! -d ${ROOTDIR} ; then
1072      exit 1      exit 1
1073  fi  fi
1074    
1075    #  Find the MITgcm ${THISVER}
1076    if test -f "${ROOTDIR}/doc/tag-index" ; then
1077        THISVER=`grep checkpoint ${ROOTDIR}/doc/tag-index | head -1`
1078    fi
1079    
1080  echo "  getting OPTFILE information:  "  echo "  getting OPTFILE information:  "
1081  if test "x${OPTFILE}" = x ; then  if test "x${OPTFILE}" = x ; then
1082      if test "x$MITGCM_OF" = x ; then      if test "x$MITGCM_OF" = x ; then
# Line 748  if test "x$OPTFILE" != xNONE ; then Line 1093  if test "x$OPTFILE" != xNONE ; then
1093          . "$OPTFILE"          . "$OPTFILE"
1094          RETVAL=$?          RETVAL=$?
1095          if test "x$RETVAL" != x0 ; then          if test "x$RETVAL" != x0 ; then
1096              echo -n "Error: failed to source OPTFILE \"$OPTFILE\""              printf "Error: failed to source OPTFILE \"$OPTFILE\""
1097              echo "--please check that variable syntax is bash-compatible"              echo "--please check that variable syntax is bash-compatible"
1098              exit 1              exit 1
1099          fi          fi
# Line 761  if test "x$OPTFILE" != xNONE ; then Line 1106  if test "x$OPTFILE" != xNONE ; then
1106      fi      fi
1107  fi  fi
1108    
1109    #  Check for broken systems that cannot correctly distinguish *.F and *.f files
1110    # check_for_broken_Ff
1111    
1112  echo "  getting AD_OPTFILE information:  "  echo "  getting AD_OPTFILE information:  "
1113  if test "x${AD_OPTFILE}" = x ; then  if test "x${AD_OPTFILE}" = x ; then
1114      if test "x$MITGCM_AD_OF" = x ; then      if test "x$MITGCM_AD_OF" = x ; then
# Line 775  if test "x${AD_OPTFILE}" != xNONE ; then Line 1123  if test "x${AD_OPTFILE}" != xNONE ; then
1123          . "$AD_OPTFILE"          . "$AD_OPTFILE"
1124          RETVAL=$?          RETVAL=$?
1125          if test "x$RETVAL" != x0 ; then          if test "x$RETVAL" != x0 ; then
1126              echo -n "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""              printf "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
1127              echo "--please check that variable syntax is bash-compatible"              echo "--please check that variable syntax is bash-compatible"
1128              exit 1              exit 1
1129          fi          fi
# Line 788  if test "x${AD_OPTFILE}" != xNONE ; then Line 1136  if test "x${AD_OPTFILE}" != xNONE ; then
1136      fi      fi
1137  fi  fi
1138    
1139  #  Check that FC, LINK, CPP, S64, LN, and MAKE are defined.  If not,  #  Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined.  If not,
1140  #  either set defaults or complain and abort!  #  either set defaults or complain and abort!
1141    if test ! "x$BASH" = x ; then
1142        # add a trailing space so that it works within the Makefile syntax (see below)
1143        BASH="$BASH "
1144    fi
1145  if test "x$FC" = x ; then  if test "x$FC" = x ; then
1146      cat <<EOF 1>&2      cat <<EOF 1>&2
1147    
# Line 800  Error: no Fortran compiler: please speci Line 1152  Error: no Fortran compiler: please speci
1152  EOF  EOF
1153      exit 1      exit 1
1154  fi  fi
1155    if test "x$CC" = x ; then
1156        CC=cc
1157    #     cat <<EOF 1>&2
1158    # Error: no C compiler: please specify using one of the following:
1159    #   1) within the options file ("CC=...") as specified by "-of=OPTFILE"
1160    #   2) the "-cc=XXX" command-line option
1161    #   3) the "./genmake_local" file
1162    # EOF
1163    #     exit 1
1164    fi
1165  if test "x$LINK" = x ; then  if test "x$LINK" = x ; then
1166      LINK=$FC      LINK=$FC
1167  fi  fi
 if test "x$CPP" = x ; then  
     CPP="cpp"  
 fi  
1168  if test "x$MAKE" = x ; then  if test "x$MAKE" = x ; then
1169      MAKE="make"      MAKE="make"
1170  fi  fi
1171    if test "x$CPP" = x ; then
1172        CPP=cpp
1173    fi
1174    #EH3 === UGLY ===
1175    #  The following is an ugly little hack to check for $CPP in /lib/ and
1176    #  it should eventually be replaced with a more general function that
1177    #  searches a combo of the user's path and a list of "usual suspects"
1178    #  to find the correct location for binaries such as $CPP.
1179    for i in " " "/lib/" ; do
1180        echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
1181    done
1182    #EH3 === UGLY ===
1183  echo "#define A a" | $CPP > test_cpp 2>&1  echo "#define A a" | $CPP > test_cpp 2>&1
1184  RETVAL=$?  RETVAL=$?
1185  if test "x$RETVAL" != x0 ; then  if test "x$RETVAL" != x0 ; then
# Line 825  EOF Line 1196  EOF
1196  else  else
1197      rm -f test_cpp      rm -f test_cpp
1198  fi  fi
1199  if test "x$MAKEDEPEND" = x ; then  look_for_makedepend
     MAKEDEPEND=makedepend  
 fi  
1200  if test "x$LN" = x ; then  if test "x$LN" = x ; then
1201      LN="ln -s"      LN="ln -s"
1202  fi  fi
# Line 845  EOF Line 1214  EOF
1214  fi  fi
1215  rm -f genmake_test_ln genmake_tlink  rm -f genmake_test_ln genmake_tlink
1216    
1217    #  Check for broken *.F/*.f handling and fix if possible
1218    check_for_broken_Ff
1219    
1220    if test ! "x$MPI" = x ; then
1221          echo "  Turning on MPI cpp macros"
1222          DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1223    fi
1224    
1225  printf "\n===  Checking system libraries  ===\n"  printf "\n===  Checking system libraries  ===\n"
1226  echo -n "  Do we have the system() command using $FC...  "  printf "  Do we have the system() command using $FC...  "
1227  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.f <<EOF
1228        program hello        program hello
1229        call system('echo hi')        call system('echo hi')
# Line 865  else Line 1241  else
1241  fi  fi
1242  rm -f genmake_tcomp*  rm -f genmake_tcomp*
1243    
1244  echo -n "  Do we have the fdate() command using $FC...  "  printf "  Do we have the fdate() command using $FC...  "
1245  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.f <<EOF
1246        program hello        program hello
1247        CHARACTER(128) string        CHARACTER(128) string
# Line 886  else Line 1262  else
1262  fi  fi
1263  rm -f genmake_tcomp*  rm -f genmake_tcomp*
1264    
1265  echo -n "  Can we call simple C routines (here, \"cloc()\") using $FC...  "  printf "  Do we have the etime() command using $FC...  "
1266    cat > genmake_tcomp.f <<EOF
1267          program hello
1268          REAL*4 ACTUAL, TARRAY(2)
1269          EXTERNAL ETIME
1270          REAL*4 ETIME
1271          actual = etime( tarray )
1272          print *, tarray
1273          end
1274    EOF
1275    $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1
1276    RETVAL=$?
1277    if test "x$RETVAL" = x0 ; then
1278        HAVE_ETIME=t
1279        DEFINES="$DEFINES -DHAVE_ETIME"
1280        echo "yes"
1281    else
1282        HAVE_ETIME=
1283        echo "no"
1284    fi
1285    rm -f genmake_tcomp*
1286    
1287    printf "  Can we call simple C routines (here, \"cloc()\") using $FC...  "
1288  check_HAVE_CLOC  check_HAVE_CLOC
1289  if test "x$HAVE_CLOC" != x ; then  if test "x$HAVE_CLOC" != x ; then
1290      echo "yes"      echo "yes"
# Line 895  else Line 1293  else
1293  fi  fi
1294  rm -f genmake_t*  rm -f genmake_t*
1295    
1296    printf "  Can we create NetCDF-enabled binaries...  "
1297    check_netcdf_libs
1298    if test "x$HAVE_NETCDF" != x ; then
1299        echo "yes"
1300    else
1301        echo "no"
1302    fi
1303    
1304    
1305  printf "\n===  Setting defaults  ===\n"  printf "\n===  Setting defaults  ===\n"
1306  echo -n "  Adding MODS directories:  "  printf "  Adding MODS directories:  "
1307  for d in $MODS ; do  for d in $MODS ; do
1308      if test ! -d $d ; then      if test ! -d $d ; then
1309          echo          echo
1310          echo "Error: MODS directory \"$d\" not found!"          echo "Error: MODS directory \"$d\" not found!"
1311          exit 1          exit 1
1312      else      else
1313          echo -n " $d"          printf " $d"
1314          SOURCEDIRS="$SOURCEDIRS $d"          SOURCEDIRS="$SOURCEDIRS $d"
1315          INCLUDEDIRS="$INCLUDEDIRS $d"          INCLUDEDIRS="$INCLUDEDIRS $d"
1316      fi      fi
# Line 919  if test "x${PLATFORM}" = x ; then Line 1325  if test "x${PLATFORM}" = x ; then
1325  fi  fi
1326    
1327  if test "x${EXEDIR}" = x ; then  if test "x${EXEDIR}" = x ; then
1328      if test "${PWD##/*/}" = "bin" -a -d ../exe -a $ROOTDIR = .. ; then      tmp=`echo $PWD | sed -e 's/\// /g' | awk '{print $NR}'`
1329        if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1330          EXEDIR=../exe          EXEDIR=../exe
1331      else      else
1332          EXEDIR=.          EXEDIR=.
# Line 934  if test "x${TOOLSDIR}" = x ; then Line 1341  if test "x${TOOLSDIR}" = x ; then
1341      TOOLSDIR="$ROOTDIR/tools"      TOOLSDIR="$ROOTDIR/tools"
1342  fi  fi
1343  if test ! -d ${TOOLSDIR} ; then  if test ! -d ${TOOLSDIR} ; then
1344      echo "Error: the specified $TOOLSDIR (\"$TOOLSDIR\") does not exist!"      echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1345      exit 1      exit 1
1346  fi  fi
1347  if test "x$S64" = x ; then  if test "x$S64" = x ; then
1348      S64='$(TOOLSDIR)/set64bitConst.sh'      echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1349        RETVAL=$?
1350        if test "x${RETVAL}" = x0 ; then
1351            S64='$(TOOLSDIR)/set64bitConst.sh'
1352        else
1353            echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1354            RETVAL=$?
1355            if test "x${RETVAL}" = x0 ; then
1356                S64='$(TOOLSDIR)/set64bitConst.csh'
1357            else
1358                cat <<EOF
1359    
1360    ERROR: neither of the two default scripts:
1361    
1362        ${TOOLSDIR}/set64bitConst.sh
1363        ${TOOLSDIR}/set64bitConst.csh
1364    
1365      are working so please check paths or specify (with \$S64) a
1366      working version of this script.
1367    
1368    EOF
1369                exit 1
1370            fi
1371        fi
1372  fi  fi
1373  THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`  THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1374    
# Line 955  if test -r $ROOTDIR"/eesupp/src/Makefile Line 1385  if test -r $ROOTDIR"/eesupp/src/Makefile
1385          rm -f make_eesupp.errors          rm -f make_eesupp.errors
1386      else      else
1387          echo "Error: problem encountered while building source files in eesupp:"          echo "Error: problem encountered while building source files in eesupp:"
1388          cat make_eesupp.errors          cat make_eesupp.errors 1>&2
1389          exit 1          exit 1
1390      fi      fi
1391  fi  fi
1392    
1393    #same for exch2
1394    if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then
1395        echo "  Making source files in exch2 from  templates"
1396        ( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1
1397        RETVAL=$?
1398        if test "x${RETVAL}" = x0 ; then
1399            rm -f make_exch2.errors
1400        else
1401            echo "Error: problem encountered while building source files in exch2:"
1402            cat make_exch2.errors 1>&2
1403            exit 1
1404        fi
1405    fi
1406    
1407  printf "\n===  Determining package settings  ===\n"  printf "\n===  Determining package settings  ===\n"
1408  if  test "x${PDEPEND}" = x ; then  if  test "x${PDEPEND}" = x ; then
1409      tmp=$ROOTDIR"/pkg/pkg_depend"      tmp=$ROOTDIR"/pkg/pkg_depend"
# Line 1015  else Line 1459  else
1459          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1460          RETVAL=$?          RETVAL=$?
1461          if test "x${RETVAL}" != x0 ; then          if test "x${RETVAL}" != x0 ; then
1462              echo -n "Error: can't parse default package list "              printf "Error: can't parse default package list "
1463              echo "-- please check PDEFAULT=\"$PDEFAULT\""              echo "-- please check PDEFAULT=\"$PDEFAULT\""
1464              exit 1              exit 1
1465          fi          fi
# Line 1023  else Line 1467  else
1467              PACKAGES="$PACKAGES $i"              PACKAGES="$PACKAGES $i"
1468          done          done
1469          echo "    before group expansion packages are: $PACKAGES"          echo "    before group expansion packages are: $PACKAGES"
1470          expand_pkg_groups          RET=1
1471            while test $RET = 1 ; do expand_pkg_groups; RET=$?; done
1472          echo "    after group expansion packages are:  $PACKAGES"          echo "    after group expansion packages are:  $PACKAGES"
1473      fi      fi
1474  fi  fi
1475    
1476  echo "  applying DISABLE settings"  echo "  applying DISABLE settings"
1477    for i in $PACKAGES ; do
1478        echo $i >> ./.tmp_pack
1479    done
1480    for i in `grep  "-" ./.tmp_pack` ; do
1481        j=`echo $i | sed 's/[-]//'`
1482        DISABLE="$DISABLE $j"
1483    done
1484  pack=  pack=
1485  for p in $PACKAGES ; do  for p in $PACKAGES ; do
1486      addit="t"      addit="t"
# Line 1045  PACKAGES="$pack" Line 1497  PACKAGES="$pack"
1497  echo "  applying ENABLE settings"  echo "  applying ENABLE settings"
1498  echo "" > ./.tmp_pack  echo "" > ./.tmp_pack
1499  PACKAGES="$PACKAGES $ENABLE"  PACKAGES="$PACKAGES $ENABLE"
1500    # Test if each explicitly referenced package exists
1501  for i in $PACKAGES ; do  for i in $PACKAGES ; do
1502      if test ! -d "$ROOTDIR/pkg/$i" ; then      j=`echo $i | sed 's/[-+]//'`
1503        if test ! -d "$ROOTDIR/pkg/$j" ; then
1504          echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\""          echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\""
1505          exit 1          exit 1
1506      fi      fi
1507      echo $i >> ./.tmp_pack      echo $i >> ./.tmp_pack
1508  done  done
 pack=`cat ./.tmp_pack | sort | uniq`  
 rm -f ./.tmp_pack  
1509  PACKAGES=  PACKAGES=
1510  for i in $pack ; do  for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do
1511      PACKAGES="$PACKAGES $i"      PACKAGES="$PACKAGES $i"
1512  done  done
1513    rm -f ./.tmp_pack
1514  echo "    packages are:  $PACKAGES"  echo "    packages are:  $PACKAGES"
1515    
1516    #  Check availability of NetCDF and then either build the MNC template
1517    #  files or delete mnc from the list of available packages.
1518    echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1519    RETVAL=$?
1520    if test "x$RETVAL" = x0 ; then
1521        if test "x$HAVE_NETCDF" != xt ; then
1522            cat <<EOF
1523    
1524    *********************************************************************
1525    WARNING: the "mnc" package was enabled but tests failed to compile
1526      NetCDF applications.  Please check that:
1527    
1528      1) NetCDF is correctly installed for this compiler and
1529      2) the LIBS variable (within the "optfile") specifies the correct
1530           NetCDF library to link against.
1531    
1532      Due to this failure, the "mnc" package is now DISABLED.
1533    *********************************************************************
1534    
1535    EOF
1536            PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
1537            DISABLE="$DISABLE mnc"
1538        else
1539            ( cd $ROOTDIR"/pkg/mnc" && $MAKE templates ) > make_mnc.errors 2>&1
1540            RETVAL=$?
1541            if test "x${RETVAL}" = x0 ; then
1542                rm -f make_mnc.errors
1543            else
1544                echo "Error: problem encountered while building source files in pkg/mnc:"
1545                cat make_mnc.errors 1>&2
1546                exit 1
1547            fi
1548        fi
1549    fi
1550    
1551  echo "  applying package dependency rules"  echo "  applying package dependency rules"
1552  ck=  ck=
1553  while test "x$ck" != xtt ; do  while test "x$ck" != xtt ; do
# Line 1124  while test "x$ck" != xtt ; do Line 1612  while test "x$ck" != xtt ; do
1612              echo "  the dependency rules for \"$dname\""              echo "  the dependency rules for \"$dname\""
1613              exit 1              exit 1
1614          fi          fi
1615          i=$(( $i + 1 ))          i=`echo "$i + 1" | bc -l`
1616            #i=$(( $i + 1 ))
1617      done      done
1618      ck=$ck"t"      ck=$ck"t"
1619  done  done
# Line 1143  for i in $PACKAGES ; do Line 1632  for i in $PACKAGES ; do
1632      fi      fi
1633  done  done
1634    
   
1635  # Create a list of #define and #undef to enable/disable packages  # Create a list of #define and #undef to enable/disable packages
1636  PACKAGES_DOT_H=PACKAGES_CONFIG.h  PACKAGES_DOT_H=PACKAGES_CONFIG.h
1637  #  The following UGLY HACK sets multiple "#undef"s and it needs to go  #  The following UGLY HACK sets multiple "#undef"s and it needs to go
# Line 1177  for i in $PACKAGES ; do Line 1665  for i in $PACKAGES ; do
1665  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!
1666      case $i in      case $i in
1667          aim_v23)          aim_v23)
             DEFINES="$DEFINES -DALLOW_AIM"  
1668              ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"              ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
1669              echo "Warning: ALLOW_AIM is set to enable aim_v23. This is REALLY ugly Jean-Michel :-)"              echo "Warning: ALLOW_AIM is set to enable aim_v23."
1670              ;;              ;;
1671      esac      esac
1672  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!
# Line 1188  done Line 1675  done
1675    
1676  echo "  Adding STANDARDDIRS"  echo "  Adding STANDARDDIRS"
1677  BUILDDIR=${BUILDDIR:-.}  BUILDDIR=${BUILDDIR:-.}
1678  if test "x$STANDARDDIRS" = x ; then  if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
1679      STANDARDDIRS="eesupp model"      STANDARDDIRS="eesupp model"
1680  fi  fi
1681  for d in $STANDARDDIRS ; do  if test "x$STANDARDDIRS" != x ; then
1682      adr="$ROOTDIR/$d/src"      for d in $STANDARDDIRS ; do
1683      if test ! -d $adr ; then          adr="$ROOTDIR/$d/src"
1684          echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""          if test ! -d $adr ; then
1685          echo "  is correct and that you correctly specified the STANDARDDIRS option"              echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
1686          exit 1              echo "  is correct and that you correctly specified the STANDARDDIRS option"
1687      else              exit 1
1688          SOURCEDIRS="$SOURCEDIRS $adr"          else
1689      fi              SOURCEDIRS="$SOURCEDIRS $adr"
1690      adr="$ROOTDIR/$d/inc"          fi
1691      if test ! -d $adr ; then          adr="$ROOTDIR/$d/inc"
1692          echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""          if test ! -d $adr ; then
1693          echo "  is correct and that you correctly specified the STANDARDDIRS option"              echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
1694          exit 1              echo "  is correct and that you correctly specified the STANDARDDIRS option"
1695      else              exit 1
1696          INCLUDEDIRS="$INCLUDEDIRS $adr"          else
1697      fi              INCLUDEDIRS="$INCLUDEDIRS $adr"
1698  done          fi
1699        done
1700    fi
1701    
1702  echo "  Searching for *OPTIONS.h files in order to warn about the presence"  echo "  Searching for *OPTIONS.h files in order to warn about the presence"
1703  echo "    of \"#define \"-type statements that are no longer allowed:"  echo "    of \"#define \"-type statements that are no longer allowed:"
# Line 1218  spaths=". $INCLUDEDIRS" Line 1707  spaths=". $INCLUDEDIRS"
1707  names=`ls -1 "$ROOTDIR/pkg"`  names=`ls -1 "$ROOTDIR/pkg"`
1708  for i in $spaths ; do  for i in $spaths ; do
1709      try="$i/CPP_OPTIONS.h"      try="$i/CPP_OPTIONS.h"
1710      if test -f $try -a -r $try -a "x$CPP_OPTIONS" == x ; then      if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
1711          echo "    found CPP_OPTIONS=\"$try\""          echo "    found CPP_OPTIONS=\"$try\""
1712          CPP_OPTIONS="$try"          CPP_OPTIONS="$try"
1713          # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h          # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
# Line 1227  for i in $spaths ; do Line 1716  for i in $spaths ; do
1716          done          done
1717      fi      fi
1718      try="$i/CPP_EEOPTIONS.h"      try="$i/CPP_EEOPTIONS.h"
1719      if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" == x ; then      if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
1720          echo "    found CPP_EEOPTIONS=\"$try\""          echo "    found CPP_EEOPTIONS=\"$try\""
1721          # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h          # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
1722  #**** not yet enabled ****  #**** not yet enabled ****
# Line 1254  for i in $SOURCEDIRS ; do Line 1743  for i in $SOURCEDIRS ; do
1743      done      done
1744  done  done
1745    
1746    
1747  echo  echo
1748  echo "===  Creating the Makefile  ==="  echo "===  Creating the Makefile  ==="
1749  echo "  setting INCLUDES"  echo "  setting INCLUDES"
1750  for i in $INCLUDEDIRS ; do  for i in $INCLUDEDIRS ; do
1751      if ! test -d $i ; then      if test ! -d $i ; then
 #       INCLUDES="$INCLUDES -I$i"  
 #   else  
1752          echo "Warning: can't find INCLUDEDIRS=\"$i\""          echo "Warning: can't find INCLUDEDIRS=\"$i\""
1753      fi      fi
1754  done  done
# Line 1270  rm -rf .links.tmp Line 1758  rm -rf .links.tmp
1758  mkdir .links.tmp  mkdir .links.tmp
1759  echo "# This section creates symbolic links" > srclinks.tmp  echo "# This section creates symbolic links" > srclinks.tmp
1760  echo "" >> srclinks.tmp  echo "" >> srclinks.tmp
1761  echo -n 'SRCFILES = '    > srclist.inc  printf 'SRCFILES = '    > srclist.inc
1762  echo -n 'CSRCFILES = '   > csrclist.inc  printf 'CSRCFILES = '   > csrclist.inc
1763  echo -n 'F90SRCFILES = ' > f90srclist.inc  printf 'F90SRCFILES = ' > f90srclist.inc
1764  echo -n 'HEADERFILES = ' > hlist.inc  printf 'HEADERFILES = ' > hlist.inc
1765  echo -n 'AD_FLOW_FILES = ' > ad_flow_files.inc  printf 'AD_FLOW_FILES = ' > ad_flow_files.inc
1766  alldirs="$SOURCEDIRS $INCLUDEDIRS ."  alldirs="$SOURCEDIRS $INCLUDEDIRS ."
1767  for d in $alldirs ; do  for d in $alldirs ; do
1768      deplist=      deplist=
# Line 1290  for d in $alldirs ; do Line 1778  for d in $alldirs ; do
1778                          ;;                          ;;
1779                    ./FC_NAMEMANGLE.h)                    ./FC_NAMEMANGLE.h)
1780                          ;;                          ;;
1781                      ./BUILD_INFO.h)
1782                            ;;
1783                    *)                    *)
1784                          touch .links.tmp/$sf                          touch .links.tmp/$sf
1785                          deplist="$deplist $sf"                          deplist="$deplist $sf"
# Line 1299  for d in $alldirs ; do Line 1789  for d in $alldirs ; do
1789                  case $extn in                  case $extn in
1790                      F)                      F)
1791                          echo    " \\"  >> srclist.inc                          echo    " \\"  >> srclist.inc
1792                          echo -n " $sf" >> srclist.inc                          printf " $sf" >> srclist.inc
1793                          ;;                          ;;
1794                      F90)                      F90)
1795                          echo    " \\"  >> f90srclist.inc                          echo    " \\"  >> f90srclist.inc
1796                          echo -n " $sf" >> f90srclist.inc                          printf " $sf" >> f90srclist.inc
1797                          ;;                          ;;
1798                      c)                      c)
1799                          echo    " \\"  >> csrclist.inc                          echo    " \\"  >> csrclist.inc
1800                          echo -n " $sf" >> csrclist.inc                          printf " $sf" >> csrclist.inc
1801                          ;;                          ;;
1802                      h)                      h)
1803                          echo    " \\"  >> hlist.inc                          echo    " \\"  >> hlist.inc
1804                          echo -n " $sf" >> hlist.inc                          printf " $sf" >> hlist.inc
1805                          ;;                          ;;
1806                      flow)                      flow)
1807                          echo    " \\"  >> ad_flow_files.inc                          echo    " \\"  >> ad_flow_files.inc
1808                          echo -n " $sf" >> ad_flow_files.inc                          printf " $sf" >> ad_flow_files.inc
1809                          ;;                          ;;
1810                  esac                  esac
1811              fi              fi
# Line 1335  echo "" >> f90srclist.inc Line 1825  echo "" >> f90srclist.inc
1825  echo "" >> hlist.inc  echo "" >> hlist.inc
1826  echo "" >> ad_flow_files.inc  echo "" >> ad_flow_files.inc
1827    
1828  if test -e $MAKEFILE ; then  if test -f $MAKEFILE ; then
1829      mv -f $MAKEFILE "$MAKEFILE.bak"      mv -f $MAKEFILE "$MAKEFILE.bak"
1830  fi  fi
1831  echo "  Writing makefile: $MAKEFILE"  echo "  Writing makefile: $MAKEFILE"
# Line 1344  echo "#    $MACHINE" >> $MAKEFILE Line 1834  echo "#    $MACHINE" >> $MAKEFILE
1834  echo "# This makefile was generated automatically on" >> $MAKEFILE  echo "# This makefile was generated automatically on" >> $MAKEFILE
1835  echo "#    $THISDATE" >> $MAKEFILE  echo "#    $THISDATE" >> $MAKEFILE
1836  echo "# by the command:" >> $MAKEFILE  echo "# by the command:" >> $MAKEFILE
1837  echo "#    $0 $@" >> $MAKEFILE  echo "#    $0 $G2ARGS" >> $MAKEFILE
1838  echo "# executed by:" >> $MAKEFILE  echo "# executed by:" >> $MAKEFILE
1839  echo "#    $USER@${THISHOSTNAME}:${THISCWD}" >> $MAKEFILE  echo "#    ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
1840    
1841  EXE_AD=$EXECUTABLE"_ad"  EXE_AD=$EXECUTABLE"_ad"
1842  EXE_FTL=$EXECUTABLE"_ftl"  EXE_FTL=$EXECUTABLE"_ftl"
# Line 1392  ENABLED_PACKAGES = ${ENABLED_PACKAGES} Line 1882  ENABLED_PACKAGES = ${ENABLED_PACKAGES}
1882  DISABLED_PACKAGES = ${DISABLED_PACKAGES}  DISABLED_PACKAGES = ${DISABLED_PACKAGES}
1883    
1884  # These files are created by Makefile  # These files are created by Makefile
1885  SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h  SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
1886    
1887  EOF  EOF
1888    
# Line 1411  KPP = ${KPP} Line 1901  KPP = ${KPP}
1901  FC = ${FC}  FC = ${FC}
1902  # Fortran compiler  # Fortran compiler
1903  F90C = ${F90C}  F90C = ${F90C}
1904    # C compiler
1905    CC = ${CC}
1906  # Link editor  # Link editor
1907  LINK = ${LINK}  LINK = ${LINK} ${LDADD}
1908    
1909  # Defines for CPP  # Defines for CPP
1910  DEFINES = ${DEFINES}  DEFINES = ${DEFINES}
# Line 1444  cat csrclist.inc      >> $MAKEFILE Line 1936  cat csrclist.inc      >> $MAKEFILE
1936  cat f90srclist.inc    >> $MAKEFILE  cat f90srclist.inc    >> $MAKEFILE
1937  cat hlist.inc         >> $MAKEFILE  cat hlist.inc         >> $MAKEFILE
1938  cat ad_flow_files.inc >> $MAKEFILE  cat ad_flow_files.inc >> $MAKEFILE
1939  echo               >> $MAKEFILE  echo >> $MAKEFILE
1940  echo 'F77FILES =  $(SRCFILES:.F=.f)'                                           >> $MAKEFILE  echo 'F77FILES =  $(SRCFILES:.F=.'$FS')'      >> $MAKEFILE
1941  echo 'F90FILES =  $(F90SRCFILES:.F90=.f90)'                                    >> $MAKEFILE  echo 'F90FILES =  $(F90SRCFILES:.F=.'$FS90')' >> $MAKEFILE
1942  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE
1943    echo >> $MAKEFILE
1944    echo '.SUFFIXES:' >> $MAKEFILE
1945    echo '.SUFFIXES: .o .'$FS' .p .F .c .'$FS90' .F90' >> $MAKEFILE
1946  rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc  rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc
1947  rm -f ad_flow_files.inc  rm -f ad_flow_files.inc
1948    
1949  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
1950    
 .SUFFIXES:  
 .SUFFIXES: .o .f .p .F .c .F90 .f90  
   
1951  all: \$(EXECUTABLE)  all: \$(EXECUTABLE)
1952  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)
1953          @echo Creating \$@ ...          @echo Creating \$@ ...
1954          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
1955  depend:  depend:
1956          @make links          @make links
1957          \$(MAKEDEPEND) -o .f \$(DEFINES) \$(INCLUDES) \$(SRCFILES)          \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(SRCFILES)
1958          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
1959            -rm -f makedepend.out
1960    
1961  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
1962    
# Line 1475  output.txt: \$(EXECUTABLE) Line 1967  output.txt: \$(EXECUTABLE)
1967          @\$(EXECUTABLE) > \$@          @\$(EXECUTABLE) > \$@
1968    
1969  clean:  clean:
1970          -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl} *.template          -rm -rf *.o *.$FS *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
1971  Clean:  Clean:
1972          @make clean          @make clean
1973          @make cleanlinks          @make cleanlinks
# Line 1486  CLEAN: Line 1978  CLEAN:
1978          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
1979          -find \$(EXEDIR) -name "*.data" -exec rm {} \;          -find \$(EXEDIR) -name "*.data" -exec rm {} \;
1980          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
1981          -rm -f \$(EXECUTABLE) output.txt          -rm -f \$(EXECUTABLE) output.txt STD*
1982    
1983  #eh3 Makefile: makefile  #eh3 Makefile: makefile
1984  makefile:  makefile:
1985          $THIS_SCRIPT $@          $THIS_SCRIPT $G2ARGS
1986  cleanlinks:  cleanlinks:
1987          -find . -type l -exec rm {} \;          -find . -type l -exec rm {} \;
1988    
1989  # Special targets ($SPECIAL_FILES) which are create by make  # Special targets (SPECIAL_FILES) which are create by make
1990  ${PACKAGES_DOT_H}:  ${PACKAGES_DOT_H}:
1991          @echo Creating \$@ ...          @echo Creating \$@ ...
1992          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
1993  AD_CONFIG.h:  AD_CONFIG.h:
1994          @echo Creating \$@ ...          @echo Creating \$@ ...
1995          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
1996  FC_NAMEMANGLE.h:  FC_NAMEMANGLE.h:
1997          @echo Creating \$@ ...          @echo Creating \$@ ...
1998          echo "$FC_NAMEMANGLE" > \$@          echo "$FC_NAMEMANGLE" > \$@
1999    
2000  # The normal chain of rules is (  .F - .f - .o  )  BUILD_INFO.h:
2001  .F.f:          @echo Creating \$@ ...
2002    EOF
2003    
2004    test ! "x$THISVER" = x  && echo "       -echo \"#define THISVER '$THISVER'\" > \$@"   >> $MAKEFILE
2005    test ! "x$THISUSER" = x && echo "       -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2006    test ! "x$THISDATE" = x && echo "       -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2007    test ! "x$THISHOST" = x && echo "       -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2008    
2009    cat >>$MAKEFILE <<EOF
2010    
2011    # The normal chain of rules is (  .F - .$FS - .o  )
2012    
2013    ## This nullifies any default implicit rules concerning these two file types:
2014    ## %.o : %.F
2015    
2016    .F.$FS:
2017          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2018  .f.o:  .$FS.o:
2019          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2020  .F90.f90:  .F90.$FS90:
2021          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2022  .f90.o:  .$FS90.o:
2023          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2024  .c.o:  .c.o:
2025          \$(CC) \$(CFLAGS) -c \$<          \$(CC) \$(CFLAGS) -c \$<
2026    
2027  # Special exceptions that use the ( .F - .p - .f - .o ) rule-chain  # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2028  .F.p:  .F.p:
2029          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2030  .p.f:  .p.$FS:
2031          \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<          \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
2032    
2033  #=========================================  #=========================================
# Line 1547  done Line 2054  done
2054    
2055  echo "  Add the source list for AD code generation"  echo "  Add the source list for AD code generation"
2056  echo >> $MAKEFILE  echo >> $MAKEFILE
2057  echo -n "AD_FILES = " >> $MAKEFILE  printf "AD_FILES = " >> $MAKEFILE
2058  AD_FILES=`cat ad_files`  AD_FILES=`cat ad_files`
2059  for i in $AD_FILES ; do  for i in $AD_FILES ; do
2060      echo    " \\" >> $MAKEFILE      echo    " \\" >> $MAKEFILE
2061      echo -n " $i" >> $MAKEFILE      printf " $i" >> $MAKEFILE
2062  done  done
2063  echo >> $MAKEFILE  echo >> $MAKEFILE
2064  rm -f ad_files  rm -f ad_files
# Line 1564  adtaf: ad_taf_output.f Line 2071  adtaf: ad_taf_output.f
2071  adtamc: ad_tamc_output.f  adtamc: ad_tamc_output.f
2072    
2073  ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)
2074          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2075          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2076          -rm -f ad_config.template          -rm -f ad_config.template
2077          @make \$(F77FILES)          @make \$(F77FILES)
# Line 1596  ftltaf: ftl_taf_output.f Line 2103  ftltaf: ftl_taf_output.f
2103  ftltamc: ftl_tamc_output.f  ftltamc: ftl_tamc_output.f
2104    
2105  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)
2106          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2107          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2108          -rm -f ftl_config.template          -rm -f ftl_config.template
2109          @make \$(F77FILES)          @make \$(F77FILES)
# Line 1645  for i in $KPPFILES ; do Line 2152  for i in $KPPFILES ; do
2152      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
2153          echo "Error: unable to add file \"$i\" to the exceptions list"          echo "Error: unable to add file \"$i\" to the exceptions list"
2154      fi      fi
2155      echo "$base.f: $base.p" >> $MAKEFILE      echo "$base.$FS: $base.p" >> $MAKEFILE
2156  done  done
2157    
2158  echo "  Making list of NOOPTFILES"  echo "  Making list of NOOPTFILES"
# Line 1655  for i in $NOOPTFILES ; do Line 2162  for i in $NOOPTFILES ; do
2162      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
2163          echo "Error: unable to add file \"$i\" to the exceptions list"          echo "Error: unable to add file \"$i\" to the exceptions list"
2164      fi      fi
2165      echo "$base.o: $base.f" >> $MAKEFILE      echo "$base.o: $base.$FS" >> $MAKEFILE
2166      printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE      printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE
2167  done  done
2168    
# Line 1669  printf "\n\n# DO NOT DELETE\n" >> $MAKEF Line 2176  printf "\n\n# DO NOT DELETE\n" >> $MAKEF
2176  printf "\n===  Done  ===\n"  printf "\n===  Done  ===\n"
2177    
2178  # Create special header files  # Create special header files
2179  $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"  $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
2180  if test ! -f $PACKAGES_DOT_H ; then  if test ! -f $PACKAGES_DOT_H ; then
2181      mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H      mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
2182  else  else
2183      cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H      cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
2184      RETVAL=$?      RETVAL=$?
2185      if test "x$RETVAL" = x0 ; then      if test "x$RETVAL" = x0 ; then
2186          rm -f $PACKAGES_DOT_H".tmp"          rm -f $PACKAGES_DOT_H".tmp"
# Line 1683  else Line 2190  else
2190      fi      fi
2191  fi  fi
2192  if test ! -f AD_CONFIG.h ; then  if test ! -f AD_CONFIG.h ; then
2193      $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h      $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
2194  fi  fi
2195    
2196    
2197  #  Write the "state" for future records  #  Write the "state" for future records
2198  if test "x$DUMPSTATE" != xf ; then  if test "x$DUMPSTATE" != xf ; then
2199      echo -n "" > genmake_state      printf "" > genmake_state
2200      for i in $gm_state ; do      for i in $gm_state ; do
2201          t1="t2=\$$i"          t1="t2=\$$i"
2202          eval $t1          eval $t1

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