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revision 1.42 by adcroft, Thu Nov 20 18:29:07 2003 UTC revision 1.61 by edhill, Thu Jan 15 04:27:39 2004 UTC
# Line 1  Line 1 
1  #!/bin/sh  #! /usr/bin/env bash
2  #  #
3  # $Header$  # $Header$
4  #  #
# Line 13  Line 13 
13  test_for_package_in_cpp_options() {  test_for_package_in_cpp_options() {
14      cpp_options=$1      cpp_options=$1
15      pkg=$2      pkg=$2
16      grep -i "#define.*ALLOW_$pkg" $cpp_options > /dev/null 2>&1      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg" || exit 99
17      RETVAL=$?      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg" || exit 99
18      if test "x${RETVAL}" = x0 ; then      test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg" || exit 99
19          echo "Error: In $cpp_options there is an illegal line: #define ALLOW_$pkg"      test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg" || exit 99
20          exit 99  }
21      fi  
22      grep -i "#undef.*ALLOW_$pkg" $cpp_options > /dev/null 2>&1  # Search for particular CPP #cmds associated with MPI
23      RETVAL=$?  # usage: test_for_mpi_in_cpp_eeoptions CPP_file
24      if test "x${RETVAL}" = x0 ; then  test_for_mpi_in_cpp_eeoptions() {
25          echo "Error: In $cpp_options there is an illegal line: #undef ALLOW_$pkg"      cpp_options=$1
26          exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI" || exit 99
27      fi      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI" || exit 99
28      grep -i "#define.*DISABLE_$pkg" $cpp_options > /dev/null 2>&1      test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI" || exit 99
29        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI" || exit 99
30    }
31    
32    # Search for particular string in a file. Return 1 if detected, 0 if not
33    # usage: test_for_string_in_file file string
34    test_for_string_in_file() {
35        file=$1
36        strng=$2
37        grep -i "$strng" $file > /dev/null 2>&1
38      RETVAL=$?      RETVAL=$?
39      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
40          echo "Error: In $cpp_options there is an illegal line: #define DISABLE_$pkg"          echo -n "Error: In $file there is an illegal line: "
41          exit 99          grep -i "$strng" $file
42            return 1
43      fi      fi
44      grep -i "#undef.*DISABLE_$pkg" $cpp_options > /dev/null 2>&1      return 0
     RETVAL=$?  
     if test "x${RETVAL}" = x0 ; then  
         echo "Error: In $cpp_options there is an illegal line: #undef DISABLE_$pkg"  
         exit 99  
    fi  
45  }  }
46    
47  # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to  # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to
# Line 73  find_possible_configs()  { Line 78  find_possible_configs()  {
78      tmp1=`uname`"_"`uname -m`      tmp1=`uname`"_"`uname -m`
79      tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`      tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
80      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
81      PLATFORM=`echo $tmp3 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`      tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
82        tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
83        PLATFORM=$tmp2
84      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
85      echo "  The platform appears to be:  $PLATFORM"      echo "  The platform appears to be:  $PLATFORM"
86            
# Line 324  WARNING: Please contact <MITgcm-support@ Line 331  WARNING: Please contact <MITgcm-support@
331  EOF  EOF
332          return 1          return 1
333      fi      fi
334      c_tcall=`nm genmake_test.o | grep tcall | cut -d ' ' -f 3`      c_tcall=`nm genmake_test.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`
335      RETVAL=$?      RETVAL=$?
336      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
337          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
# Line 354  WARNING: Please contact <MITgcm-support@ Line 361  WARNING: Please contact <MITgcm-support@
361  EOF  EOF
362          return 1          return 1
363      fi      fi
364      f_tcall=`nm genmake_tcomp.o | grep tcall | cut -d ' ' -f 3`      f_tcall=`nm genmake_tcomp.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`
365      RETVAL=$?      RETVAL=$?
366      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
367          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
# Line 430  EOF Line 437  EOF
437  }  }
438    
439    
440    check_netcdf_libs()  {
441        cat <<EOF > genmake_tnc.F
442          program fgennc
443    #include "netcdf.inc"
444          integer iret, ncid, xid
445          iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
446          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
447          iret = nf_def_dim(ncid, 'X', 11, xid)
448          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
449          iret = nf_close(ncid)
450          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
451          end
452    EOF
453        $CPP genmake_tnc.F > genmake_tnc.f  \
454            &&  $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f $LIBS >> genmake_tnc.log 2>&1
455        RET_COMPILE=$?
456        test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1
457        RETVAL=$?
458        if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
459            HAVE_NETCDF=t
460        else
461            cat genmake_tnc.log >> genmake_warnings
462        fi
463        rm -f genmake_tnc*
464    }
465    
466    
467  #  Set defaults here  #  Set defaults here
468  COMMANDL="$0 $@"  COMMANDL="$0 $@"
469    
# Line 438  LN= Line 472  LN=
472  S64=  S64=
473  KPP=  KPP=
474  FC=  FC=
475    CPP=
476  LINK=  LINK=
477  # DEFINES="-DWORDLENGTH=4"  # DEFINES="-DWORDLENGTH=4"
478  DEFINES=  DEFINES=
# Line 466  HAVE_SYSTEM= Line 501  HAVE_SYSTEM=
501  HAVE_FDATE=  HAVE_FDATE=
502  FC_NAMEMANGLE=  FC_NAMEMANGLE=
503  HAVE_CLOC=  HAVE_CLOC=
504    HAVE_NETCDF=
505    
506  MODS=  MODS=
507  TOOLSDIR=  TOOLSDIR=
508  SOURCEDIRS=  SOURCEDIRS=
509  INCLUDEDIRS=  INCLUDEDIRS=
510  STANDARDDIRS=  STANDARDDIRS="USE_THE_DEFAULT"
511    
512  PWD=`pwd`  PWD=`pwd`
513  MAKE=make  MAKE=make
# Line 505  TAMC_EXTRA= Line 541  TAMC_EXTRA=
541    
542  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
543  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
544  gm_s2="FC IEEE MPI JAM DUMPSTATE STANDARDDIRS"  gm_s2="FC CPP IEEE MPI JAM DUMPSTATE STANDARDDIRS"
545    
546  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
547  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
# Line 586  for ac_option ; do Line 622  for ac_option ; do
622          -optfile=* | --optfile=* | -of=* | --of=*)          -optfile=* | --optfile=* | -of=* | --of=*)
623              OPTFILE=$ac_optarg ;;              OPTFILE=$ac_optarg ;;
624                    
625          -adoptfile | --adoptfile | -ad | --ad)          -adoptfile | --adoptfile | -adof | --adof)
626              ac_prev=AD_OPTFILE ;;              ac_prev=AD_OPTFILE ;;
627          -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)          -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
628              AD_OPTFILE=$ac_optarg ;;              AD_OPTFILE=$ac_optarg ;;
# Line 888  if test "x$HAVE_CLOC" != x ; then Line 924  if test "x$HAVE_CLOC" != x ; then
924  else  else
925      echo "no"      echo "no"
926  fi  fi
 echo "$FC_NAMEMANGLE" > FC_NAMEMANGLE.h.template  
 cmp FC_NAMEMANGLE.h FC_NAMEMANGLE.h.template > /dev/null 2>&1  
 RETVAL=$?  
 if test "x$RETVAL" != x0 ; then  
     mv -f FC_NAMEMANGLE.h.template FC_NAMEMANGLE.h  
 fi  
927  rm -f genmake_t*  rm -f genmake_t*
928    
929    echo -n "  Can we create NetCDF-enabled binaries...  "
930    check_netcdf_libs
931    if test "x$HAVE_NETCDF" != x ; then
932        echo "yes"
933    else
934        echo "no"
935    fi
936    
937    
938  printf "\n===  Setting defaults  ===\n"  printf "\n===  Setting defaults  ===\n"
939  echo -n "  Adding MODS directories:  "  echo -n "  Adding MODS directories:  "
# Line 941  fi Line 979  fi
979  if test "x$S64" = x ; then  if test "x$S64" = x ; then
980      S64='$(TOOLSDIR)/set64bitConst.sh'      S64='$(TOOLSDIR)/set64bitConst.sh'
981  fi  fi
982    THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
983    
984  EXECUTABLE=${EXECUTABLE:-mitgcmuv}  EXECUTABLE=${EXECUTABLE:-mitgcmuv}
985    
# Line 960  if test -r $ROOTDIR"/eesupp/src/Makefile Line 999  if test -r $ROOTDIR"/eesupp/src/Makefile
999      fi      fi
1000  fi  fi
1001    
1002    #same for exch2
1003    if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then
1004        echo "  Making source files in exch2 from  templates"
1005        ( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1
1006        RETVAL=$?
1007        if test "x${RETVAL}" = x0 ; then
1008            rm -f make_exch2.errors
1009        else
1010            echo "Error: problem encountered while building source files in exch2:"
1011            cat make_exch2.errors
1012            exit 1
1013        fi
1014    fi
1015    
1016  printf "\n===  Determining package settings  ===\n"  printf "\n===  Determining package settings  ===\n"
1017  if  test "x${PDEPEND}" = x ; then  if  test "x${PDEPEND}" = x ; then
1018      tmp=$ROOTDIR"/pkg/pkg_depend"      tmp=$ROOTDIR"/pkg/pkg_depend"
# Line 1143  for i in $PACKAGES ; do Line 1196  for i in $PACKAGES ; do
1196      fi      fi
1197  done  done
1198    
1199    #  Check for ability to build and use NetCDF
1200    echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1201    RETVAL=$?
1202    if test "x$RETVAL" = x0 -a "x$HAVE_NETCDF" != xt ; then
1203        cat <<EOF
1204    
1205  # Create a list of #define and #undef to enable/disable packages  WARNING: the "mnc" package has been enabled but tests failed to
1206  PACKAGES_DOT_H=PACKAGES_CONFIG.h    compile and/or execute NetCDF applications.  Please check that:
 cat <<EOF >$PACKAGES_DOT_H".tmp"  
 C=== GENMAKE v2 ===  
 C  The following defines have been set by GENMAKE, so please do not  
 C  edit anything below these comments.  In general, you should  
 C  add or remove packages by re-running genmake with different  
 C  "-enable" and/or "-disable" options.  
   
 #ifndef PACKAGES_H  
 #define PACKAGES_H  
1207    
1208  C  Packages disabled by genmake:    1) NetCDF is installed for your compiler and
1209      2) the LIBS variable (within the 'optfile") specifies the correct
1210           NetCDF library to link against.
1211      
1212  EOF  EOF
1213    fi
1214    
1215    # Create a list of #define and #undef to enable/disable packages
1216    PACKAGES_DOT_H=PACKAGES_CONFIG.h
1217  #  The following UGLY HACK sets multiple "#undef"s and it needs to go  #  The following UGLY HACK sets multiple "#undef"s and it needs to go
1218  #  away.  On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h  #  away.  On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h
1219  #  file would eventually be split up so that all package-related #define  #  file would eventually be split up so that all package-related #define
1220  #  statements could be separated and handled only by genmake.  #  statements could be separated and handled only by genmake.
1221  names=`ls -1 "$ROOTDIR/pkg"`  names=`ls -1 "$ROOTDIR/pkg"`
1222  all_pack=  all_pack=
1223    DISABLED_PACKAGES=
1224  for n in $names ; do  for n in $names ; do
1225      if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then      if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then
1226          has_pack="f"          has_pack="f"
# Line 1175  for n in $names ; do Line 1232  for n in $names ; do
1232          done          done
1233          if test "x$has_pack" = xf ; then          if test "x$has_pack" = xf ; then
1234              undef=`echo "ALLOW_$n" | $AWK '{print toupper($0)}'`              undef=`echo "ALLOW_$n" | $AWK '{print toupper($0)}'`
1235              echo "#undef $undef" >> $PACKAGES_DOT_H".tmp"              DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
1236          fi          fi
1237      fi      fi
1238  done  done
1239  cat <<EOF >>$PACKAGES_DOT_H".tmp"  ENABLED_PACKAGES=
   
 C  Packages enabled by genmake:  
 EOF  
1240  for i in $PACKAGES ; do  for i in $PACKAGES ; do
1241      def=`echo "ALLOW_$i" | $AWK '{print toupper($0)}'`      def=`echo "ALLOW_$i" | $AWK '{print toupper($0)}'`
1242      echo "#define $def" >> $PACKAGES_DOT_H".tmp"      ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
1243  #eh3 DEFINES="$DEFINES -D$def"  #eh3 DEFINES="$DEFINES -D$def"
1244    
1245  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!
1246      case $i in      case $i in
1247          aim_v23)          aim_v23)
1248              echo "#define   ALLOW_AIM" >> $PACKAGES_DOT_H".tmp"              ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
1249              DEFINES="$DEFINES -DALLOW_AIM"              echo "Warning: ALLOW_AIM is set to enable aim_v23."
             echo "Warning: ALLOW_AIM is set to enable aim_v23. This is REALLY ugly Jean-Michel :-)"  
1250              ;;              ;;
1251      esac      esac
1252  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!
1253    
1254  done  done
 cat <<EOF >>$PACKAGES_DOT_H".tmp"  
   
 #endif /* PACKAGES_H */  
 EOF  
   
 if test ! -f $PACKAGES_DOT_H ; then  
     mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H  
 else  
     cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H  
     RETVAL=$?  
     if test "x$RETVAL" = x0 ; then  
         rm -f $PACKAGES_DOT_H".tmp"  
     else  
         mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"  
         mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H  
     fi  
 fi  
1255    
1256  echo "  Adding STANDARDDIRS"  echo "  Adding STANDARDDIRS"
1257  BUILDDIR=${BUILDDIR:-.}  BUILDDIR=${BUILDDIR:-.}
1258  if test "x$STANDARDDIRS" = x ; then  if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
1259      STANDARDDIRS="eesupp model"      STANDARDDIRS="eesupp model"
1260  fi  fi
1261  for d in $STANDARDDIRS ; do  if test "x$STANDARDDIRS" != x ; then
1262      adr="$ROOTDIR/$d/src"      for d in $STANDARDDIRS ; do
1263      if test ! -d $adr ; then          adr="$ROOTDIR/$d/src"
1264          echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""          if test ! -d $adr ; then
1265          echo "  is correct and that you correctly specified the STANDARDDIRS option"              echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
1266          exit 1              echo "  is correct and that you correctly specified the STANDARDDIRS option"
1267      else              exit 1
1268          SOURCEDIRS="$SOURCEDIRS $adr"          else
1269      fi              SOURCEDIRS="$SOURCEDIRS $adr"
1270      adr="$ROOTDIR/$d/inc"          fi
1271      if test ! -d $adr ; then          adr="$ROOTDIR/$d/inc"
1272          echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""          if test ! -d $adr ; then
1273          echo "  is correct and that you correctly specified the STANDARDDIRS option"              echo "Error:  directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
1274          exit 1              echo "  is correct and that you correctly specified the STANDARDDIRS option"
1275      else              exit 1
1276          INCLUDEDIRS="$INCLUDEDIRS $adr"          else
1277      fi              INCLUDEDIRS="$INCLUDEDIRS $adr"
1278  done          fi
1279        done
1280    fi
1281    
1282  echo "  Searching for CPP_OPTIONS.h in order to warn about the presence"  echo "  Searching for *OPTIONS.h files in order to warn about the presence"
1283  echo "    of \"#define ALLOW_PKGNAME\"-type statements:"  echo "    of \"#define \"-type statements that are no longer allowed:"
1284  CPP_OPTIONS=  CPP_OPTIONS=
1285    CPP_EEOPTIONS=
1286  spaths=". $INCLUDEDIRS"  spaths=". $INCLUDEDIRS"
1287    names=`ls -1 "$ROOTDIR/pkg"`
1288  for i in $spaths ; do  for i in $spaths ; do
1289      try="$i/CPP_OPTIONS.h"      try="$i/CPP_OPTIONS.h"
1290      #  echo -n "    trying $try : "      if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
     if test -f $try -a -r $try ; then  
1291          echo "    found CPP_OPTIONS=\"$try\""          echo "    found CPP_OPTIONS=\"$try\""
1292          CPP_OPTIONS="$try"          CPP_OPTIONS="$try"
1293          break          # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
1294            for n in $names ; do
1295                test_for_package_in_cpp_options $CPP_OPTIONS $n
1296            done
1297        fi
1298        try="$i/CPP_EEOPTIONS.h"
1299        if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
1300            echo "    found CPP_EEOPTIONS=\"$try\""
1301            # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
1302    #**** not yet enabled ****
1303    #        test_for_mpi_in_cpp_eeoptions $try
1304    #**** not yet enabled ****
1305            CPP_EEOPTIONS="$try"
1306      fi      fi
1307  done  done
1308  if test "x$CPP_OPTIONS" = x ; then  if test "x$CPP_OPTIONS" = x ; then
1309      echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"      echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"
1310      exit 1      exit 1
1311  fi  fi
 # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h  
 names=`ls -1 "$ROOTDIR/pkg"`  
 for n in $names ; do  
     test_for_package_in_cpp_options $CPP_OPTIONS $n  
 done  
   
1312    
1313  #  Here, we build the list of files to be "run through" the adjoint  #  Here, we build the list of files to be "run through" the adjoint
1314  #  compiler.  #  compiler.
# Line 1278  for i in $SOURCEDIRS ; do Line 1323  for i in $SOURCEDIRS ; do
1323      done      done
1324  done  done
1325    
 cat <<EOF > adjoint_sed  
 s/call adopen(/call adopen ( mythid,\\  
      \&           /g  
 s/call adclose(/call adclose( mythid,\\  
      \&           /g  
 s/call adread(/call adread ( mythid,\\  
      \&           /g  
 s/call adwrite(/call adwrite( mythid,\\  
      \&           /g  
   
 EOF  
1326    
1327  echo  echo
1328  echo "===  Creating the Makefile  ==="  echo "===  Creating the Makefile  ==="
# Line 1319  for d in $alldirs ; do Line 1353  for d in $alldirs ; do
1353      for sf in $sfiles ; do      for sf in $sfiles ; do
1354          if test ! -r ".links.tmp/$sf" ; then          if test ! -r ".links.tmp/$sf" ; then
1355              if test -f "$d/$sf" ; then              if test -f "$d/$sf" ; then
1356                    case $d/$sf in
1357                      ./$PACKAGES_DOT_H)
1358                            ;;
1359                      ./AD_CONFIG.h)
1360                            ;;
1361                      ./FC_NAMEMANGLE.h)
1362                            ;;
1363                      *)
1364                            touch .links.tmp/$sf
1365                            deplist="$deplist $sf"
1366                            ;;
1367                    esac
1368                  extn=`echo $sf | $AWK -F '.' '{print $NF}'`                  extn=`echo $sf | $AWK -F '.' '{print $NF}'`
                 touch .links.tmp/$sf  
                 deplist="$deplist $sf"  
1369                  case $extn in                  case $extn in
1370                      F)                      F)
1371                          echo    " \\"  >> srclist.inc                          echo    " \\"  >> srclist.inc
# Line 1379  EXE_FTL=$EXECUTABLE"_ftl" Line 1423  EXE_FTL=$EXECUTABLE"_ftl"
1423  EXE_SVD=$EXECUTABLE"_svd"  EXE_SVD=$EXECUTABLE"_svd"
1424    
1425  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
1426    #
1427    # OPTFILE="$OPTFILE"
1428  #  #
1429  # BUILDDIR     : Directory where object files are written  # BUILDDIR     : Directory where object files are written
1430  # SOURCEDIRS   : Directories containing the source (.F) files  # SOURCEDIRS   : Directories containing the source (.F) files
# Line 1412  EXE_AD      = ${EXE_AD} Line 1458  EXE_AD      = ${EXE_AD}
1458  EXE_FTL     = ${EXE_FTL}  EXE_FTL     = ${EXE_FTL}
1459  EXE_SVD     = ${EXE_SVD}  EXE_SVD     = ${EXE_SVD}
1460    
1461    ENABLED_PACKAGES = ${ENABLED_PACKAGES}
1462    DISABLED_PACKAGES = ${DISABLED_PACKAGES}
1463    
1464    # These files are created by Makefile
1465    SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h
1466    
1467  EOF  EOF
1468    
1469  #  Note: figure out some way to add Hyades JAM libraries here  #  Note: figure out some way to add Hyades JAM libraries here
# Line 1476  cat >>$MAKEFILE <<EOF Line 1528  cat >>$MAKEFILE <<EOF
1528  .SUFFIXES: .o .f .p .F .c .F90 .f90  .SUFFIXES: .o .f .p .F .c .F90 .f90
1529    
1530  all: \$(EXECUTABLE)  all: \$(EXECUTABLE)
1531  \$(EXECUTABLE): \$(OBJFILES)  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)
1532            @echo Creating \$@ ...
1533          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
1534  depend:  depend:
1535          @make links          @make links
1536          \$(MAKEDEPEND) -o .f \$(DEFINES) \$(INCLUDES) \$(SRCFILES)          \$(MAKEDEPEND) -o .f \$(DEFINES) \$(INCLUDES) \$(SRCFILES)
1537          ${TOOLSDIR}/f90mkdepend >> \$(MAKEFILE)          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
1538    
1539  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES)  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
1540    
1541  small_f: \$(F77FILES) \$(F90FILES)  small_f: \$(F77FILES) \$(F90FILES)
1542    
# Line 1492  output.txt: \$(EXECUTABLE) Line 1545  output.txt: \$(EXECUTABLE)
1545          @\$(EXECUTABLE) > \$@          @\$(EXECUTABLE) > \$@
1546    
1547  clean:  clean:
1548          -cat AD_CONFIG.template > AD_CONFIG.h          -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl} *.template
         -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl}  
1549  Clean:  Clean:
1550          @make clean          @make clean
1551          @make cleanlinks          @make cleanlinks
1552          -rm -f Makefile.bak genmake_state genmake_*optfile genmake_warnings make.log          -rm -f \$(SPECIAL_FILES)
1553            -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak
1554  CLEAN:  CLEAN:
1555          @make Clean          @make Clean
1556          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
# Line 1507  CLEAN: Line 1560  CLEAN:
1560    
1561  #eh3 Makefile: makefile  #eh3 Makefile: makefile
1562  makefile:  makefile:
1563          ${0} $@          $THIS_SCRIPT $@
1564  cleanlinks:  cleanlinks:
1565          -find . -type l -exec rm {} \;          -find . -type l -exec rm {} \;
1566    
1567    # Special targets ($SPECIAL_FILES) which are create by make
1568    ${PACKAGES_DOT_H}:
1569            @echo Creating \$@ ...
1570            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
1571    AD_CONFIG.h:
1572            @echo Creating \$@ ...
1573            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
1574    FC_NAMEMANGLE.h:
1575            @echo Creating \$@ ...
1576            echo "$FC_NAMEMANGLE" > \$@
1577    
1578  # The normal chain of rules is (  .F - .f - .o  )  # The normal chain of rules is (  .F - .f - .o  )
1579  .F.f:  .F.f:
1580          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
# Line 1570  adtaf: ad_taf_output.f Line 1634  adtaf: ad_taf_output.f
1634  adtamc: ad_tamc_output.f  adtamc: ad_tamc_output.f
1635    
1636  ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)
1637            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
1638          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
1639            -rm -f ad_config.template
1640          @make \$(F77FILES)          @make \$(F77FILES)
1641          @make \$(AD_FLOW_FILES)          @make \$(AD_FLOW_FILES)
1642          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f
1643    
1644  ad_taf_output.f: ad_input_code.f  ad_taf_output.f: ad_input_code.f
1645          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f
1646          cat ad_input_code_ad.f | sed -f adjoint_sed > ad_taf_output.f          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f
1647    
1648  adtafonly:  adtafonly:
1649          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f
1650          cat ad_input_code_ad.f | sed -f adjoint_sed > ad_taf_output.f          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f
1651    
1652  ad_taf: ad_taf_output.o \$(OBJFILES)  ad_taf: ad_taf_output.o \$(OBJFILES)
1653          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
1654    
1655  ad_tamc_output.f: ad_input_code.f  ad_tamc_output.f: ad_input_code.f
1656          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.f          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.f
1657          cat ad_input_code_ad.f | sed -f adjoint_sed > ad_tamc_output.f          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.f
1658    
1659  ad_tamc: ad_tamc_output.o \$(OBJFILES)  ad_tamc: ad_tamc_output.o \$(OBJFILES)
1660          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
# Line 1600  ftltaf: ftl_taf_output.f Line 1666  ftltaf: ftl_taf_output.f
1666  ftltamc: ftl_tamc_output.f  ftltamc: ftl_tamc_output.f
1667    
1668  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)
1669            @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
1670          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
1671            -rm -f ftl_config.template
1672          @make \$(F77FILES)          @make \$(F77FILES)
1673          @make \$(AD_FLOW_FILES)          @make \$(AD_FLOW_FILES)
1674          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.f          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.f
1675    
1676  ftl_taf_output.f: ftl_input_code.f  ftl_taf_output.f: ftl_input_code.f
1677          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f
1678          cat ftl_input_code_ftl.f | sed -f adjoint_sed > ftl_taf_output.f          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f
1679    
1680  ftltafonly:  ftltafonly:
1681          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f
1682          cat ftl_input_code_ftl.f | sed -f adjoint_sed > ftl_taf_output.f          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f
1683    
1684  ftl_taf: ftl_taf_output.o \$(OBJFILES)  ftl_taf: ftl_taf_output.o \$(OBJFILES)
1685          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
1686    
1687  ftl_tamc_output.f: ftl_input_code.f  ftl_tamc_output.f: ftl_input_code.f
1688          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.f          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.f
1689          cat ftl_input_code_ftl.f | sed -f adjoint_sed > ftl_tamc_output.f          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.f
1690    
1691  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
1692          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
# Line 1670  printf "\n\n# DO NOT DELETE\n" >> $MAKEF Line 1738  printf "\n\n# DO NOT DELETE\n" >> $MAKEF
1738    
1739  printf "\n===  Done  ===\n"  printf "\n===  Done  ===\n"
1740    
1741  #  Write the "template" files for the adjoint builds  # Create special header files
1742  cat >AD_CONFIG.template <<EOF  $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
1743  C  WARNING: This file is automatically generated by genmake2 and  if test ! -f $PACKAGES_DOT_H ; then
1744  C    used by the Makefile rules.  Please DO NOT EDIT this file      mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
1745  C    unless you are CERTAIN that you know what you are doing.  else
1746        cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
1747  #undef ALLOW_ADJOINT_RUN      RETVAL=$?
1748  #undef ALLOW_TANGENTLINEAR_RUN      if test "x$RETVAL" = x0 ; then
1749  #undef ALLOW_ECCO_OPTIMIZATION          rm -f $PACKAGES_DOT_H".tmp"
1750  EOF      else
1751  cat >ad_config.template <<EOF          mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"
1752  C  WARNING: This file is automatically generated by genmake2 and          mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
1753  C    used by the Makefile rules.  Please DO NOT EDIT this file      fi
1754  C    unless you are CERTAIN that you know what you are doing.  fi
1755    if test ! -f AD_CONFIG.h ; then
1756  #define ALLOW_ADJOINT_RUN      $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
1757  #undef ALLOW_TANGENTLINEAR_RUN  fi
 #undef ALLOW_ECCO_OPTIMIZATION  
 EOF  
 cat >ftl_config.template <<EOF  
 C  WARNING: This file is automatically generated by genmake2 and  
 C    used by the Makefile rules.  Please DO NOT EDIT this file  
 C    unless you are CERTAIN that you know what you are doing.  
   
 #undef ALLOW_ADJOINT_RUN  
 #define ALLOW_TANGENTLINEAR_RUN  
 #undef ALLOW_ECCO_OPTIMIZATION  
 EOF  
 cat >svd_config.template <<EOF  
 C  WARNING: This file is automatically generated by genmake2 and  
 C    used by the Makefile rules.  Please DO NOT EDIT this file  
 C    unless you are CERTAIN that you know what you are doing.  
   
 #undef ALLOW_ADJOINT_RUN  
 #undef ALLOW_TANGENTLINEAR_RUN  
 #undef ALLOW_ECCO_OPTIMIZATION  
 EOF  
 cp AD_CONFIG.template AD_CONFIG.h  
1758    
1759    
1760  #  Write the "state" for future records  #  Write the "state" for future records

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