19 |
-help | --help | -h | --h |
-help | --help | -h | --h |
20 |
Print this help message and exit. |
Print this help message and exit. |
21 |
|
|
22 |
|
-oad | --oad |
23 |
|
Generate a Makefile for an OpenAD built |
24 |
|
|
25 |
|
-nocat4ad | -dog4ad | -ncad | -dad |
26 |
|
do not concatenate (cat) source code sent to TAF |
27 |
|
resulting in compilation of multiple files |
28 |
|
|
29 |
-adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME |
-adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME |
30 |
-adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME |
-adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME |
31 |
Use "NAME" as the adoptfile. By default, the file at |
Use "NAME" as the adoptfile. By default, the file at |
32 |
|
"tools/adjoint_options/adjoint_oad" (for OpenAD built) or |
33 |
"tools/adjoint_options/adjoint_default" will be used. |
"tools/adjoint_options/adjoint_default" will be used. |
34 |
|
|
35 |
-nooptfile | --nooptfile |
-optfile NAME | --optfile NAME | -of NAME | --of NAME |
|
-optfile NAME | --optfile NAME | -of NAME | --of NAME |
|
36 |
-optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME |
-optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME |
37 |
Use "NAME" as the optfile. By default, an attempt will be |
Use "NAME" as the optfile. By default, an attempt will be |
38 |
made to find an appropriate "standard" optfile in the |
made to find an appropriate "standard" optfile in the |
697 |
echo "Error: unable to parse package dependencies -- please check PKG_DEPEND=\"$1\"" |
echo "Error: unable to parse package dependencies -- please check PKG_DEPEND=\"$1\"" |
698 |
exit 1 |
exit 1 |
699 |
fi |
fi |
700 |
|
#echo "---- content of tmp file '.pd_tmp' :" ; cat .pd_tmp ; echo "---- end of file" |
701 |
. ./.pd_tmp |
. ./.pd_tmp |
702 |
rm -f ./.pd_tmp |
rm -f ./.pd_tmp |
703 |
} |
} |
1087 |
} |
} |
1088 |
|
|
1089 |
check_lapack_libs() { |
check_lapack_libs() { |
1090 |
if test ! "x$SKIP_LAPACK_CHECK" = x ; then |
if test "x$CHECK_FOR_LAPACK" = xf ; then return ; fi |
|
return |
|
|
fi |
|
1091 |
echo >> $LOGFILE |
echo >> $LOGFILE |
1092 |
echo "running: check_lapack_libs()" >> $LOGFILE |
echo "running: check_lapack_libs()" >> $LOGFILE |
1093 |
cat <<EOF > genmake_tla.F |
cat <<EOF > genmake_tla.F |
1283 |
DEVEL= |
DEVEL= |
1284 |
HAVE_TEST_L= |
HAVE_TEST_L= |
1285 |
|
|
1286 |
# comment this line out to enable lapack test |
# set this to "t" to enable lapack test |
1287 |
SKIP_LAPACK_CHECK=t |
CHECK_FOR_LAPACK=f |
1288 |
|
|
1289 |
# DEFINES checked by test compilation or command-line |
# DEFINES checked by test compilation or command-line |
1290 |
HAVE_SYSTEM= |
HAVE_SYSTEM= |
1331 |
FS90= |
FS90= |
1332 |
|
|
1333 |
AUTODIFF_PKG_USED=f |
AUTODIFF_PKG_USED=f |
1334 |
|
OPENAD= |
1335 |
AD_OPTFILE= |
AD_OPTFILE= |
1336 |
|
CAT_SRC_FOR_TAF=1 |
1337 |
TAF= |
TAF= |
1338 |
AD_TAF_FLAGS= |
AD_TAF_FLAGS= |
1339 |
FTL_TAF_FLAGS= |
FTL_TAF_FLAGS= |
1363 |
gm_s8="HAVE_NETCDF HAVE_SYSTEM HAVE_FDATE HAVE_ETIME HAVE_LAPACK HAVE_FLUSH" |
gm_s8="HAVE_NETCDF HAVE_SYSTEM HAVE_FDATE HAVE_ETIME HAVE_LAPACK HAVE_FLUSH" |
1364 |
|
|
1365 |
# The following are all related to adjoint/tangent-linear stuff |
# The following are all related to adjoint/tangent-linear stuff |
1366 |
gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS" |
gm_s10="AUTODIFF_PKG_USED AD_OPTFILE OPENAD TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS" |
1367 |
gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS" |
gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS" |
1368 |
gm_s12="TAF_EXTRA TAMC_EXTRA DIVA MPIINCLUDEDIR MPI_HEADER_FILES" |
gm_s12="TAF_EXTRA TAMC_EXTRA DIVA MPIINCLUDEDIR MPI_HEADER_FILES" |
1369 |
|
|
1408 |
-help | --help | -h | --h) |
-help | --help | -h | --h) |
1409 |
usage ;; |
usage ;; |
1410 |
|
|
|
-nooptfile | --nooptfile) |
|
|
OPTFILE="NONE" ;; |
|
1411 |
-optfile | --optfile | -of | --of) |
-optfile | --optfile | -of | --of) |
1412 |
ac_prev=OPTFILE ;; |
ac_prev=OPTFILE ;; |
1413 |
-optfile=* | --optfile=* | -of=* | --of=*) |
-optfile=* | --optfile=* | -of=* | --of=*) |
1414 |
OPTFILE=$ac_optarg ;; |
OPTFILE=$ac_optarg ;; |
1415 |
|
|
1416 |
|
-oad | --oad) |
1417 |
|
OPENAD="true" ; ALWAYS_USE_F90=1 ;; |
1418 |
|
-nocat4ad | -dog4ad | -ncad | -dad) |
1419 |
|
CAT_SRC_FOR_TAF=0 ;; |
1420 |
-adoptfile | --adoptfile | -adof | --adof) |
-adoptfile | --adoptfile | -adof | --adof) |
1421 |
ac_prev=AD_OPTFILE ;; |
ac_prev=AD_OPTFILE ;; |
1422 |
-adoptfile=* | --adoptfile=* | -adof=* | --adof=*) |
-adoptfile=* | --adoptfile=* | -adof=* | --adof=*) |
1588 |
|
|
1589 |
#TMP=./genmk_$$ |
#TMP=./genmk_$$ |
1590 |
#- try to put temporary files in system-local /tmp dir |
#- try to put temporary files in system-local /tmp dir |
1591 |
TMP=/tmp/genmk_$$ |
TMP=/tmp/genmk_${USER}_$$ |
1592 |
touch $TMP ; retVal=$? |
touch $TMP ; retVal=$? |
1593 |
if [ $retVal -eq 0 ] ; then |
if [ $retVal -eq 0 ] ; then |
1594 |
if test ! -r $TMP ; then TMP=./genmk_$$ ; fi |
if test ! -r $TMP ; then TMP=./genmk_$$ ; fi |
1690 |
|
|
1691 |
echo " getting AD_OPTFILE information:" |
echo " getting AD_OPTFILE information:" |
1692 |
if test "x${AD_OPTFILE}" = x ; then |
if test "x${AD_OPTFILE}" = x ; then |
1693 |
if test "x$MITGCM_AD_OF" = x ; then |
if test "x$MITGCM_AD_OF" != x ; then |
1694 |
|
AD_OPTFILE=$MITGCM_AD_OF |
1695 |
|
elif test "x$OPENAD" = x ; then |
1696 |
AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default |
AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default |
1697 |
else |
else |
1698 |
AD_OPTFILE=$MITGCM_AD_OF |
AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_oad |
1699 |
fi |
fi |
1700 |
fi |
fi |
1701 |
if test "x${AD_OPTFILE}" != xNONE ; then |
if test "x${AD_OPTFILE}" != xNONE ; then |
1718 |
fi |
fi |
1719 |
|
|
1720 |
#==================================================================== |
#==================================================================== |
1721 |
|
# Initialize INCLUDEDIRSMK from and optfile INCLUDEDIRS |
1722 |
|
if test "x${INCLUDEDIRS}" != "x" ; then |
1723 |
|
INCLUDEDIRSMK=${INCLUDEDIRS} |
1724 |
|
fi |
1725 |
|
|
1726 |
|
#==================================================================== |
1727 |
# Set default values if not set by the optfile |
# Set default values if not set by the optfile |
1728 |
# |
# |
1729 |
# Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined. If not, |
# Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined. If not, |
1968 |
fi |
fi |
1969 |
rm -f genmake_tcomp* |
rm -f genmake_tcomp* |
1970 |
|
|
1971 |
printf " Do we have the etime() command using $FC... " |
printf " Do we have the etime() command using $FC... " |
1972 |
cat > genmake_tcomp.$FS <<EOF |
cat > genmake_tcomp_1.$FS <<EOF |
1973 |
program hello |
program hello |
1974 |
REAL*4 ACTUAL, TARRAY(2) |
REAL*4 actual, tarray(2) |
1975 |
EXTERNAL ETIME |
EXTERNAL ETIME |
1976 |
REAL*4 ETIME |
REAL*4 ETIME |
1977 |
actual = etime( tarray ) |
actual = ETIME( tarray ) |
1978 |
print *, tarray |
print *, tarray |
1979 |
end |
end |
1980 |
EOF |
EOF |
1981 |
$FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1 |
$FC $FFLAGS -o genmake_tcomp_1 genmake_tcomp_1.$FS > genmake_tcomp.log 2>&1 |
1982 |
RETVAL=$? |
RETVAL=$? |
1983 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
1984 |
HAVE_ETIME=t |
HAVE_ETIME='Fct' |
1985 |
DEFINES="$DEFINES -DHAVE_ETIME" |
DEFINES="$DEFINES -DHAVE_ETIME_FCT" |
1986 |
echo "yes" |
echo " yes (${HAVE_ETIME})" |
1987 |
else |
else |
1988 |
|
cat > genmake_tcomp_2.$FS <<EOF |
1989 |
|
program hello |
1990 |
|
REAL*4 actual, tarray(2) |
1991 |
|
actual = -999. |
1992 |
|
call ETIME( tarray, actual ) |
1993 |
|
if ( actual.ge.0. ) then |
1994 |
|
print *, 0, tarray, actual |
1995 |
|
else |
1996 |
|
print *, 1, tarray, actual |
1997 |
|
endif |
1998 |
|
end |
1999 |
|
EOF |
2000 |
|
$FC $FFLAGS -o genmake_tcomp_2 genmake_tcomp_2.$FS >> genmake_tcomp.log 2>&1 |
2001 |
|
RETVAL=$? |
2002 |
|
if test "x$RETVAL" = x0 ; then |
2003 |
|
echo -n 'c,' |
2004 |
|
./genmake_tcomp_2 > genmake_tcomp_2.out 2>&1 |
2005 |
|
RETVAL=$? |
2006 |
|
fi |
2007 |
|
if test "x$RETVAL" = x0 ; then |
2008 |
|
echo -n 'r:' |
2009 |
|
RETVAL=`cat genmake_tcomp_2.out | $AWK '{print $1}'` |
2010 |
|
fi |
2011 |
|
if test "x$RETVAL" = x0 ; then |
2012 |
|
HAVE_ETIME='SbR' |
2013 |
|
DEFINES="$DEFINES -DHAVE_ETIME_SBR" |
2014 |
|
echo " yes (${HAVE_ETIME})" |
2015 |
|
else |
2016 |
HAVE_ETIME= |
HAVE_ETIME= |
2017 |
echo "no" |
echo " no" |
2018 |
|
fi |
2019 |
fi |
fi |
2020 |
|
#mkdir chk_etime ; cp -p -f genmake_tcomp* chk_etime |
2021 |
rm -f genmake_tcomp* |
rm -f genmake_tcomp* |
2022 |
|
|
2023 |
printf " Can we call simple C routines (here, \"cloc()\") using $FC... " |
printf " Can we call simple C routines (here, \"cloc()\") using $FC... " |
2112 |
printf "$d " |
printf "$d " |
2113 |
SOURCEDIRS="$SOURCEDIRS $d" |
SOURCEDIRS="$SOURCEDIRS $d" |
2114 |
INCLUDEDIRS="$INCLUDEDIRS $d" |
INCLUDEDIRS="$INCLUDEDIRS $d" |
2115 |
|
SOURCEDIRSMK="$SOURCEDIRSMK $d" |
2116 |
|
INCLUDEDIRSMK="$INCLUDEDIRSMK $d" |
2117 |
fi |
fi |
2118 |
done |
done |
2119 |
echo |
echo |
2137 |
|
|
2138 |
if test "x${TOOLSDIR}" = x ; then |
if test "x${TOOLSDIR}" = x ; then |
2139 |
TOOLSDIR="$ROOTDIR/tools" |
TOOLSDIR="$ROOTDIR/tools" |
2140 |
|
TOOLSDIRMK='$(ROOTDIR)'"/tools" |
2141 |
|
else |
2142 |
|
TOOLSDIRMK=${TOOLSDIR} |
2143 |
fi |
fi |
2144 |
if test ! -d ${TOOLSDIR} ; then |
if test ! -d ${TOOLSDIR} ; then |
2145 |
echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!" |
echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!" |
2409 |
fi |
fi |
2410 |
fi |
fi |
2411 |
|
|
|
# Check for package RADTRANS: if LAPACK is not available, |
|
|
# then issue a warning that the direct radtrans solver is not available. |
|
|
if test "x$HAVE_LAPACK" != xt ; then |
|
|
echo " $PACKAGES " | grep ' radtrans ' > /dev/null 2>&1 |
|
|
RETVAL=$? |
|
|
if test "x$RETVAL" = x0 ; then |
|
|
cat <<EOF |
|
|
********************************************************************* |
|
|
WARNING: the "radtrans" package was enabled but tests failed to |
|
|
compile LAPACK applications. This means that the direct radtrans |
|
|
solver is not available and compilation will fail if it is enabled. |
|
|
If you want to use the direct solver, please check that: |
|
|
|
|
|
1) LAPACK is correctly installed for this compiler and |
|
|
2) the LIBS variable (within the "optfile") specifies the correct |
|
|
LAPACK library to link against. |
|
|
********************************************************************* |
|
|
EOF |
|
|
fi |
|
|
fi |
|
|
|
|
2412 |
# Make sure the openad package is enabled if using OpenAD |
# Make sure the openad package is enabled if using OpenAD |
2413 |
if test "x$OPENAD" != x ; then |
if test "x$OPENAD" != x ; then |
2414 |
echo " $PACKAGES " | grep ' openad ' > /dev/null 2>&1 |
echo " $PACKAGES " | grep ' openad ' > /dev/null 2>&1 |
2450 |
if test "x$p" = "x$pname" ; then pin="t" ; fi |
if test "x$p" = "x$pname" ; then pin="t" ; fi |
2451 |
done |
done |
2452 |
|
|
2453 |
# Is the DNAME entry a (+) or (-) rule ? |
# Is the DNAME entry a (=), (+) or (-) rule ? |
2454 |
tmp="dname=\"\$DNAME_$i\"" |
tmp="dname=\"\$DNAME_$i\"" |
2455 |
eval $tmp |
eval $tmp |
2456 |
plus="-" |
plus="a" |
2457 |
echo $dname | grep '^+' > /dev/null 2>&1 |
echo $dname | grep '^+' > /dev/null 2>&1 |
2458 |
RETVAL=$? |
RETVAL=$? |
2459 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then plus="+" ; fi |
2460 |
plus="+" |
echo $dname | grep '^-' > /dev/null 2>&1 |
2461 |
fi |
RETVAL=$? |
2462 |
|
if test "x$RETVAL" = x0 ; then plus="-" ; fi |
2463 |
|
|
2464 |
# Is $dname in the current $PACKAGES list? |
# Is $dname in the current $PACKAGES list? |
2465 |
dname=`echo $dname | sed -e 's/^[+-]//'` |
dname=`echo $dname | sed -e 's/^[=+-]//'` |
2466 |
din="f" |
din="f" |
2467 |
for p in $PACKAGES ; do |
for p in $PACKAGES ; do |
2468 |
if test "x$p" = "x$dname" ; then |
if test "x$p" = "x$dname" ; then |
2471 |
done |
done |
2472 |
|
|
2473 |
# Do we need to add $dname according to the dependency rules? |
# Do we need to add $dname according to the dependency rules? |
2474 |
if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then |
if test "x$pin" = xt -a "x$plus" != "x-" -a "x$din" = xf ; then |
2475 |
#echo " " $pname ": need to add :" $dname |
#echo " " $pname ": need to add :" $dname |
2476 |
in_dis="f" |
in_dis="f" |
2477 |
for dis in $DISABLE ; do |
for dis in $DISABLE ; do |
2480 |
fi |
fi |
2481 |
done |
done |
2482 |
if test "x$in_dis" = xt ; then |
if test "x$in_dis" = xt ; then |
2483 |
echo "Error: can't satisfy package dependencies:" |
if test "x$plus" = "x+" ; then |
2484 |
echo " \"$dname\" is required by the dependency rules" |
echo "Error: can't satisfy package dependencies:" |
2485 |
echo " but is disallowed by the DISABLE settings" |
echo " \"$dname\" is required with pkg \"$pname\" (dependency rules)" |
2486 |
exit 1 |
echo " but is disallowed by the DISABLE settings" |
2487 |
|
exit 1 |
2488 |
|
elif test "x$ck" = xt ; then |
2489 |
|
#- (=) is a weaker dependency rule: warning but no stop |
2490 |
|
echo "Warning: pkg \"$dname\" is set DISABLE (from: \"$PKG_LIST\")" |
2491 |
|
echo -n " but is recommended with pkg \"$pname\" (dependency rules)" |
2492 |
|
echo " <- ignores recommendation" |
2493 |
|
fi |
2494 |
else |
else |
2495 |
PACKAGES="$PACKAGES $dname" |
PACKAGES="$PACKAGES $dname" |
2496 |
ck= |
ck= |
2500 |
# Do we need to get rid of $dname according to the dependency rules? |
# Do we need to get rid of $dname according to the dependency rules? |
2501 |
if test "x$pin" = xt -a "x$plus" = "x-" -a "x$din" = xt; then |
if test "x$pin" = xt -a "x$plus" = "x-" -a "x$din" = xt; then |
2502 |
echo "Error: can't satisfy package dependencies:" |
echo "Error: can't satisfy package dependencies:" |
2503 |
echo " \"$pname\" was requested but is disallowed by" |
echo " \"$dname\" was requested but is disallowed by" |
2504 |
echo " the dependency rules for \"$dname\"" |
echo " the dependency rules for \"$pname\"" |
2505 |
exit 1 |
exit 1 |
2506 |
fi |
fi |
2507 |
i=`echo "$i + 1" | bc -l` |
i=`echo "$i + 1" | bc -l` |
2513 |
fi |
fi |
2514 |
for i in $PACKAGES ; do |
for i in $PACKAGES ; do |
2515 |
adr="$ROOTDIR/pkg/$i" |
adr="$ROOTDIR/pkg/$i" |
2516 |
|
adrmk='$(ROOTDIR)'"/pkg/$i" |
2517 |
if test -d $adr ; then |
if test -d $adr ; then |
2518 |
SOURCEDIRS="$SOURCEDIRS $adr" |
SOURCEDIRS="$SOURCEDIRS $adr" |
2519 |
INCLUDEDIRS="$INCLUDEDIRS $adr" |
INCLUDEDIRS="$INCLUDEDIRS $adr" |
2520 |
|
SOURCEDIRSMK="$SOURCEDIRSMK $adrmk" |
2521 |
|
INCLUDEDIRSMK="$INCLUDEDIRSMK $adrmk" |
2522 |
if test "x$i" = xautodiff ; then |
if test "x$i" = xautodiff ; then |
2523 |
AUTODIFF_PKG_USED=t |
AUTODIFF_PKG_USED=t |
2524 |
fi |
fi |
2574 |
if test "x$STANDARDDIRS" != x ; then |
if test "x$STANDARDDIRS" != x ; then |
2575 |
for d in $STANDARDDIRS ; do |
for d in $STANDARDDIRS ; do |
2576 |
adr="$ROOTDIR/$d/src" |
adr="$ROOTDIR/$d/src" |
2577 |
|
adrmk='$(ROOTDIR)/'"$d/src" |
2578 |
if test ! -d $adr ; then |
if test ! -d $adr ; then |
2579 |
echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" |
echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" |
2580 |
echo " is correct and that you correctly specified the STANDARDDIRS option" |
echo " is correct and that you correctly specified the STANDARDDIRS option" |
2581 |
exit 1 |
exit 1 |
2582 |
else |
else |
2583 |
SOURCEDIRS="$SOURCEDIRS $adr" |
SOURCEDIRS="$SOURCEDIRS $adr" |
2584 |
|
SOURCEDIRSMK="$SOURCEDIRSMK $adrmk" |
2585 |
fi |
fi |
2586 |
adr="$ROOTDIR/$d/inc" |
adr="$ROOTDIR/$d/inc" |
2587 |
|
adrmk='$(ROOTDIR)/'"$d/inc" |
2588 |
if test ! -d $adr ; then |
if test ! -d $adr ; then |
2589 |
echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" |
echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" |
2590 |
echo " is correct and that you correctly specified the STANDARDDIRS option" |
echo " is correct and that you correctly specified the STANDARDDIRS option" |
2591 |
exit 1 |
exit 1 |
2592 |
else |
else |
2593 |
INCLUDEDIRS="$INCLUDEDIRS $adr" |
INCLUDEDIRS="$INCLUDEDIRS $adr" |
2594 |
|
INCLUDEDIRSMK="$INCLUDEDIRSMK $adrmk" |
2595 |
fi |
fi |
2596 |
done |
done |
2597 |
fi |
fi |
2691 |
OAD_KEEP_ORIGINAL="/dev/null" |
OAD_KEEP_ORIGINAL="/dev/null" |
2692 |
OAD_CB2M_FILES="/dev/null" |
OAD_CB2M_FILES="/dev/null" |
2693 |
OADTOOLS="$TOOLSDIR/OAD_support" |
OADTOOLS="$TOOLSDIR/OAD_support" |
2694 |
|
OADTOOLSMK='$(TOOLSDIR)/OAD_support' |
2695 |
echo " looking for dontCompile file: " |
echo " looking for dontCompile file: " |
2696 |
for i in "." $MODS ; do |
for i in "." $MODS $OADTOOLS ; do |
2697 |
if test -r $i"/dontCompile" ; then |
if test -r $i"/dontCompile" ; then |
2698 |
OAD_DONT_COMPILE=$i"/dontCompile" |
OAD_DONT_COMPILE=$i"/dontCompile" |
2699 |
echo " found $OAD_DONT_COMPILE" |
echo " found $OAD_DONT_COMPILE" |
2701 |
fi |
fi |
2702 |
done |
done |
2703 |
echo " looking for dontTransform file: " |
echo " looking for dontTransform file: " |
2704 |
for i in "." $MODS ; do |
for i in "." $MODS $OADTOOLS ; do |
2705 |
if test -r $i"/dontTransform" ; then |
if test -r $i"/dontTransform" ; then |
2706 |
OAD_DONT_TRANSFORM=$i"/dontTransform" |
OAD_DONT_TRANSFORM=$i"/dontTransform" |
2707 |
echo " found $OAD_DONT_TRANSFORM" |
echo " found $OAD_DONT_TRANSFORM" |
2709 |
fi |
fi |
2710 |
done |
done |
2711 |
echo " looking for keepOriginal file: " |
echo " looking for keepOriginal file: " |
2712 |
for i in "." $MODS ; do |
for i in "." $MODS $OADTOOLS ; do |
2713 |
if test -r $i"/keepOriginal" ; then |
if test -r $i"/keepOriginal" ; then |
2714 |
OAD_KEEP_ORIGINAL=$i"/keepOriginal" |
OAD_KEEP_ORIGINAL=$i"/keepOriginal" |
2715 |
echo " found $OAD_KEEP_ORIGINAL" |
echo " found $OAD_KEEP_ORIGINAL" |
2717 |
fi |
fi |
2718 |
done |
done |
2719 |
echo " looking for cb2mFiles: " |
echo " looking for cb2mFiles: " |
2720 |
for i in "." $MODS ; do |
for i in "." $MODS $OADTOOLS ; do |
2721 |
if test -r $i"/cb2mFiles" ; then |
if test -r $i"/cb2mFiles" ; then |
2722 |
OAD_CB2M_FILES=$i"/cb2mFiles" |
OAD_CB2M_FILES=$i"/cb2mFiles" |
2723 |
echo " found $OAD_CB2M_FILES" |
echo " found $OAD_CB2M_FILES" |
2736 |
printf 'H_SRC_FILES = ' > $TMP.hsrclist |
printf 'H_SRC_FILES = ' > $TMP.hsrclist |
2737 |
printf 'AD_FLOW_FILES = ' > $TMP.ad_flow_files |
printf 'AD_FLOW_FILES = ' > $TMP.ad_flow_files |
2738 |
alldirs="$SOURCEDIRS $INCLUDEDIRS ." |
alldirs="$SOURCEDIRS $INCLUDEDIRS ." |
2739 |
|
alldirsmk=(${SOURCEDIRSMK} ${INCLUDEDIRSMK} ".") |
2740 |
|
nd=0 |
2741 |
for d in $alldirs ; do |
for d in $alldirs ; do |
2742 |
|
dmk=${alldirsmk[${nd}]} |
2743 |
|
nd=$((${nd}+1)) |
2744 |
deplist= |
deplist= |
2745 |
sfiles=`( cd $d; echo *.[h,c,F] *.flow )` |
sfiles=`( cd $d; echo *.[h,c,F] *.flow )` |
2746 |
sfiles=`( echo $sfiles; cd $d; echo *.F90 )` |
sfiles=`( echo $sfiles; cd $d; echo *.F90 )` |
2843 |
if test "x$deplist" != x ; then |
if test "x$deplist" != x ; then |
2844 |
if test "$d" != "." ; then |
if test "$d" != "." ; then |
2845 |
echo "" >> $TMP.srclinks |
echo "" >> $TMP.srclinks |
2846 |
echo "# These files are linked from $d" >> $TMP.srclinks |
echo "# These files are linked from $dmk ( aka $d )" >> $TMP.srclinks |
2847 |
echo "$deplist :" >> $TMP.srclinks |
echo "$deplist :" >> $TMP.srclinks |
2848 |
# We need to make sure that the link isn't already there. |
# We need to make sure that the link isn't already there. |
2849 |
# This may happen when make thinks that a header file has to be "remade" |
# This may happen when make thinks that a header file has to be "remade" |
2850 |
# because a module it depends on has changed. In this case we do nothing. |
# because a module it depends on has changed. In this case we do nothing. |
2851 |
printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> $TMP.srclinks |
printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $dmk >> $TMP.srclinks |
2852 |
fi |
fi |
2853 |
fi |
fi |
2854 |
done |
done |
2905 |
|
|
2906 |
ROOTDIR = ${ROOTDIR} |
ROOTDIR = ${ROOTDIR} |
2907 |
BUILDDIR = ${BUILDDIR} |
BUILDDIR = ${BUILDDIR} |
2908 |
SOURCEDIRS = ${SOURCEDIRS} |
SOURCEDIRS = ${SOURCEDIRSMK} |
2909 |
INCLUDEDIRS = ${INCLUDEDIRS} |
INCLUDEDIRS = ${INCLUDEDIRSMK} |
2910 |
EXEDIR = ${EXEDIR} |
EXEDIR = ${EXEDIR} |
2911 |
EXECUTABLE = \$(EXEDIR)/${EXECUTABLE} |
EXECUTABLE = \$(EXEDIR)/${EXECUTABLE} |
2912 |
TOOLSDIR = ${TOOLSDIR} |
TOOLSDIR = ${TOOLSDIRMK} |
2913 |
OADTOOLS = ${OADTOOLS} |
OADTOOLS = ${OADTOOLSMK} |
2914 |
|
|
2915 |
#eh3 new defines for the adjoint work |
#eh3 new defines for the adjoint work |
2916 |
AUTODIFF = ${ROOTDIR}/pkg/autodiff |
AUTODIFF = \$(ROOTDIR)/pkg/autodiff |
2917 |
EXE_AD = ${EXE_AD} |
EXE_AD = ${EXE_AD} |
2918 |
EXE_FTL = ${EXE_FTL} |
EXE_FTL = ${EXE_FTL} |
2919 |
EXE_SVD = ${EXE_SVD} |
EXE_SVD = ${EXE_SVD} |
2960 |
KFLAGS1 = ${KFLAGS1} |
KFLAGS1 = ${KFLAGS1} |
2961 |
KFLAGS2 = ${KFLAGS2} |
KFLAGS2 = ${KFLAGS2} |
2962 |
# Optim./debug for FC |
# Optim./debug for FC |
2963 |
FFLAGS = ${FFLAGS} ${FEXTRAFLAGS} |
FFLAGS = ${FFLAGS} |
2964 |
FOPTIM = ${FOPTIM} |
FOPTIM = ${FOPTIM} ${FEXTRAFLAGS} |
2965 |
# Optim./debug for FC |
# Optim./debug for FC |
2966 |
F90FLAGS = ${F90FLAGS} |
F90FLAGS = ${F90FLAGS} |
2967 |
F90OPTIM = ${F90OPTIM} |
F90OPTIM = ${F90OPTIM} |
3027 |
|
|
3028 |
lib: libmitgcmuv.a |
lib: libmitgcmuv.a |
3029 |
|
|
3030 |
libmitgcmuv.a: \$(OBJFILES) |
libmitgcmuv.a: \$(SPECIAL_FILES) \$(OBJFILES) |
3031 |
ar rcv libmitgcmuv.a \$(OBJFILES) |
ar rcv libmitgcmuv.a \$(OBJFILES) |
3032 |
ar d libmitgcmuv.a main.o |
ar d libmitgcmuv.a main.o |
3033 |
|
|
3037 |
|
|
3038 |
small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES) |
small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES) |
3039 |
|
|
|
output.txt: \$(EXECUTABLE) |
|
|
@printf 'running ... ' |
|
|
@\$(EXECUTABLE) > \$@ |
|
|
|
|
3040 |
# remove most of the files that "make" generates |
# remove most of the files that "make" generates |
3041 |
clean: |
clean: |
3042 |
-rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template |
-rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template |
3188 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
3189 |
rm -f $TMP.adSrcFiles |
rm -f $TMP.adSrcFiles |
3190 |
|
|
3191 |
|
if test $CAT_SRC_FOR_TAF = 0 ; then |
3192 |
|
cat >>$MAKEFILE <<EOF |
3193 |
|
|
3194 |
|
# ... Utilities ... |
3195 |
|
remove_comments: |
3196 |
|
sed -i.bak -f \$(TOOLSDIR)/remove_comments_sed \$(AD_FILES) |
3197 |
|
@-rm -f \$(AD_FILES:.$FS=.$FS.bak) |
3198 |
|
adj_sed: |
3199 |
|
sed -i.bak -f \$(TOOLSDIR)/adjoint_sed \$(AD_FILES:.$FS=_ad.$FS) |
3200 |
|
@-rm -f \$(AD_FILES:.$FS=_ad.$FS.bak) |
3201 |
|
ftl_sed: |
3202 |
|
sed -i.bak -f \$(TOOLSDIR)/adjoint_sed \$(AD_FILES:.$FS=_tl.$FS) |
3203 |
|
@-rm -f \$(AD_FILES:.$FS=_tl.$FS.bak) |
3204 |
|
adobjfiles: \$(AD_FILES:.$FS=_ad.o) |
3205 |
|
ftlobjfiles: \$(AD_FILES:.$FS=_tl.o) |
3206 |
|
EOF |
3207 |
|
fi |
3208 |
|
|
3209 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
3210 |
|
|
3211 |
# ... AD ... |
# ... AD ... |
3228 |
@\$(MAKE) -f \$(MAKEFILE) \$(FLOWFILES) |
@\$(MAKE) -f \$(MAKEFILE) \$(FLOWFILES) |
3229 |
cat \$(FLOWFILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ad_input_code.$FS |
cat \$(FLOWFILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ad_input_code.$FS |
3230 |
|
|
3231 |
ad_taf_output.$FS: ad_input_code.$FS |
adtafonly: |
|
@-rm -f ad_input_code_ad.$FS ; echo '' |
|
3232 |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
3233 |
ls -l ad_input_code_ad.$FS |
ls -l ad_input_code_ad.$FS |
3234 |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
3235 |
|
|
3236 |
adtafonly: |
EOF |
3237 |
|
|
3238 |
|
if test $CAT_SRC_FOR_TAF = 1 ; then |
3239 |
|
cat >>$MAKEFILE <<EOF |
3240 |
|
# ... send 1 file to TAF ... |
3241 |
|
ad_taf_output.$FS: ad_input_code.$FS |
3242 |
|
@-rm -f ad_input_code_ad.$FS ; echo '' |
3243 |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
3244 |
ls -l ad_input_code_ad.$FS |
ls -l ad_input_code_ad.$FS |
3245 |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
3247 |
\$(EXE_AD): \$(SPECIAL_FILES) \$(H_SRC_FILES) ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
\$(EXE_AD): \$(SPECIAL_FILES) \$(H_SRC_FILES) ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
3248 |
\$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
\$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
3249 |
|
|
3250 |
ad_tamc_output.$FS: ad_input_code.$FS |
adobj: ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) |
|
\$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS |
|
|
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS |
|
3251 |
|
|
3252 |
ad_tamc: ad_tamc_output.o \$(OBJFILES) |
EOF |
3253 |
\$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS) |
|
3254 |
|
else |
3255 |
|
cat >>$MAKEFILE <<EOF |
3256 |
|
# ... send multiple files to TAF ... |
3257 |
|
ad_taf_output.$FS: \$(AD_FLOW_FILES) \$(AD_FILES) |
3258 |
|
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Adjoint version" -bAD_CONFIG_H -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN > ad_config.template |
3259 |
|
cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h |
3260 |
|
@-rm -f ad_config.template |
3261 |
|
@\$(MAKE) -f \$(MAKEFILE) \$(F77_PP_SRC_FILES) |
3262 |
|
@\$(MAKE) -f \$(MAKEFILE) \$(FLOWFILES) |
3263 |
|
@-rm -f \$(AD_FILES:.$FS=_ad.$FS) \$(AD_FILES:.$FS=_ad.o); echo '' |
3264 |
|
\$(MAKE) -f \$(MAKEFILE) remove_comments |
3265 |
|
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) \$(FLOWFILES) \$(AD_FILES) |
3266 |
|
\$(MAKE) -f \$(MAKEFILE) adj_sed |
3267 |
|
cat \$(AD_FILES:.$FS=_ad.$FS) > ad_taf_output.$FS |
3268 |
|
|
3269 |
|
\$(EXE_AD): \$(SPECIAL_FILES) \$(H_SRC_FILES) ad_taf_output.$FS \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
3270 |
|
\$(MAKE) -f \$(MAKEFILE) adobjfiles |
3271 |
|
\$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(AD_FILES:.$FS=_ad.o) \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
3272 |
|
|
3273 |
|
adobj: ad_taf_output.$FS \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) |
3274 |
|
\$(MAKE) -f \$(MAKEFILE) adobjfiles |
3275 |
|
|
3276 |
|
EOF |
3277 |
|
fi |
3278 |
|
|
3279 |
|
cat >>$MAKEFILE <<EOF |
3280 |
adonlyfwd: |
adonlyfwd: |
3281 |
patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff |
patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff |
3282 |
|
|
3283 |
adtrick: |
adtrick: |
3284 |
patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff |
patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff |
3285 |
|
|
3286 |
adobj: ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) |
ad_tamc_output.$FS: ad_input_code.$FS |
3287 |
|
\$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS |
3288 |
|
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS |
3289 |
|
|
3290 |
|
ad_tamc: ad_tamc_output.o \$(OBJFILES) |
3291 |
|
\$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS) |
3292 |
|
|
3293 |
# ... FTL ... |
# ... FTL ... |
3294 |
ftlall: ftl_exe_target |
ftlall: ftl_exe_target |
3310 |
@\$(MAKE) -f \$(MAKEFILE) \$(AD_FLOW_FILES) |
@\$(MAKE) -f \$(MAKEFILE) \$(AD_FLOW_FILES) |
3311 |
cat \$(AD_FLOW_FILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ftl_input_code.$FS |
cat \$(AD_FLOW_FILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ftl_input_code.$FS |
3312 |
|
|
3313 |
ftl_taf_output.$FS: ftl_input_code.$FS |
ftltafonly: |
|
@-rm -f ftl_input_code_tl.$FS ; echo '' |
|
3314 |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
3315 |
ls -l ftl_input_code_tl.$FS |
ls -l ftl_input_code_tl.$FS |
3316 |
cat ftl_input_code_tl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
cat ftl_input_code_tl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
3317 |
|
|
3318 |
ftltafonly: |
EOF |
3319 |
|
|
3320 |
|
if test $CAT_SRC_FOR_TAF = 1 ; then |
3321 |
|
cat >>$MAKEFILE <<EOF |
3322 |
|
# ... send 1 file to TAF ... |
3323 |
|
ftl_taf_output.$FS: ftl_input_code.$FS |
3324 |
|
@-rm -f ftl_input_code_tl.$FS ; echo '' |
3325 |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
3326 |
ls -l ftl_input_code_tl.$FS |
ls -l ftl_input_code_tl.$FS |
3327 |
cat ftl_input_code_tl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
cat ftl_input_code_tl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
3329 |
\$(EXE_FTL): \$(SPECIAL_FILES) \$(H_SRC_FILES) ftl_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
\$(EXE_FTL): \$(SPECIAL_FILES) \$(H_SRC_FILES) ftl_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
3330 |
\$(LINK) -o \${EXE_FTL} \$(FFLAGS) \$(FOPTIM) ftl_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
\$(LINK) -o \${EXE_FTL} \$(FFLAGS) \$(FOPTIM) ftl_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
3331 |
|
|
3332 |
|
EOF |
3333 |
|
|
3334 |
|
else |
3335 |
|
cat >>$MAKEFILE <<EOF |
3336 |
|
# ... send multiple files to TAF ... |
3337 |
|
ftl_taf_output.$FS: \$(AD_FLOW_FILES) \$(AD_FILES) |
3338 |
|
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "TangLin version" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN > ad_config.template |
3339 |
|
cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h |
3340 |
|
@-rm -f ad_config.template |
3341 |
|
@\$(MAKE) -f \$(MAKEFILE) \$(F77_PP_SRC_FILES) |
3342 |
|
@\$(MAKE) -f \$(MAKEFILE) \$(AD_FLOW_FILES) |
3343 |
|
@-rm -f \$(AD_FILES:.$FS=_tl.$FS) \$(AD_FILES:.$FS=_tl.o); echo '' |
3344 |
|
\$(MAKE) -f \$(MAKEFILE) remove_comments |
3345 |
|
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) \$(AD_FLOW_FILES) \$(AD_FILES) |
3346 |
|
\$(MAKE) -f \$(MAKEFILE) ftl_sed |
3347 |
|
cat \$(AD_FILES:.$FS=_tl.$FS) > ftl_taf_output.$FS |
3348 |
|
|
3349 |
|
\$(EXE_FTL): \$(SPECIAL_FILES) \$(H_SRC_FILES) ftl_taf_output.$FS \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
3350 |
|
\$(MAKE) -f \$(MAKEFILE) ftlobjfiles |
3351 |
|
\$(LINK) -o \${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(AD_FILES:.$FS=_tl.o) \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
3352 |
|
|
3353 |
|
EOF |
3354 |
|
fi |
3355 |
|
|
3356 |
|
cat >>$MAKEFILE <<EOF |
3357 |
ftl_tamc_output.$FS: ftl_input_code.$FS |
ftl_tamc_output.$FS: ftl_input_code.$FS |
3358 |
\$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS |
\$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS |
3359 |
cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS |
cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS |
3396 |
# ============ begin OpenAD specific section ============== |
# ============ begin OpenAD specific section ============== |
3397 |
|
|
3398 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
3399 |
|
# ... OpenAD ... |
3400 |
|
|
3401 |
# all the source files linked from the various locations: |
# all the source files linked from the various locations: |
3402 |
ALL_LINKED_FILES= \ |
ALL_LINKED_FILES= \ |
3450 |
|
|
3451 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
3452 |
|
|
3453 |
adAll: \$(EXE_AD) |
adAll: ad_exe_target |
3454 |
.PHONY: adAll |
.PHONY: adAll |
3455 |
|
|
3456 |
|
ad_exe_target: |
3457 |
|
@echo Update AD_CONFIG.h and make \$(EXE_AD) |
3458 |
|
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Adjoint version" -bAD_CONFIG_H -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN > ad_config.template |
3459 |
|
@cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h |
3460 |
|
@-rm -f ad_config.template |
3461 |
|
\$(MAKE) -f \$(MAKEFILE) \$(EXE_AD) |
3462 |
|
|
3463 |
CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES)) |
CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES)) |
3464 |
|
|
3465 |
.PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90) |
.PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90) |
3476 |
OAD_cp.F90 \ |
OAD_cp.F90 \ |
3477 |
OAD_rev.F90 \ |
OAD_rev.F90 \ |
3478 |
OAD_tape.F90 \ |
OAD_tape.F90 \ |
3479 |
|
OAD_regular_cp.F90 \ |
3480 |
revolve.F90 |
revolve.F90 |
3481 |
|
|
3482 |
OPENAD_SUPPORT_C_SRC_FILES = \ |
OPENAD_SUPPORT_C_SRC_FILES = \ |
3503 |
\$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(AD_OBJ_FILES_S2) \$(LIBS) |
\$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(AD_OBJ_FILES_S2) \$(LIBS) |
3504 |
|
|
3505 |
# create sources files modules from header files containing common blocks |
# create sources files modules from header files containing common blocks |
3506 |
%_mod.FF90 : %.h \${OADTOOLS}/cb2mGetModules.csh \${OADTOOLS}/cb2mGetModules.awk |
%_mod.FF90 : %.h \$(OADTOOLS)/cb2mGetModules.csh \$(OADTOOLS)/cb2mGetModules.awk |
3507 |
\${OADTOOLS}/cb2mGetModules.csh $< \${OADTOOLS}/cb2mGetModules.awk |
\$(OADTOOLS)/cb2mGetModules.csh $< \$(OADTOOLS)/cb2mGetModules.awk |
3508 |
|
|
3509 |
# create new header files with USE statements for the new modules made above |
# create new header files with USE statements for the new modules made above |
3510 |
%_mod.h : %.h \${OADTOOLS}/cb2mGetHeaders.csh \${OADTOOLS}/cb2mGetHeaders.awk |
%_mod.h : %.h \$(OADTOOLS)/cb2mGetHeaders.csh \$(OADTOOLS)/cb2mGetHeaders.awk |
3511 |
\${OADTOOLS}/cb2mGetHeaders.csh $< \${OADTOOLS}/cb2mGetHeaders.awk \$(CB2M_F90_SRC_NAMES) |
\$(OADTOOLS)/cb2mGetHeaders.csh $< \$(OADTOOLS)/cb2mGetHeaders.awk \$(CB2M_F90_SRC_NAMES) |
3512 |
|
|
3513 |
# change the include directives of everybody to refer to the new header files with the USE statements |
# change the include directives of everybody to refer to the new header files with the USE statements |
3514 |
%_cb2m.FF90 : %.F \${OADTOOLS}/cb2mUseModules.bash |
%_cb2m.FF90 : %.F \$(OADTOOLS)/cb2mUseModules.bash |
3515 |
\${OADTOOLS}/cb2mUseModules.bash $< ${MPI} |
\$(OADTOOLS)/cb2mUseModules.bash $< ${MPI} |
3516 |
|
|
3517 |
# makefile debug rule |
# makefile debug rule |
3518 |
small_f: \$(CB2M_F90_PP_SRC_FILES) |
small_f: \$(CB2M_F90_PP_SRC_FILES) |
3519 |
.PHONY: small_f |
.PHONY: small_f |
3520 |
|
|
|
ad_output.txt: \$(EXE_AD) |
|
|
@printf 'linking data files ... ' |
|
|
\$(LN) -f ../input_ad/data* ../input_ad/eedata . |
|
|
\$(LN) -f ../../global_ocean.90x40x15/input/*.bin . |
|
|
@printf 'running ... ' |
|
|
@./\$(EXE_AD) > \$@ |
|
|
|
|
3521 |
ad_input_code.f$FS90: \$(CB2M_AD_FILES) |
ad_input_code.f$FS90: \$(CB2M_AD_FILES) |
3522 |
cat \$^ > \$@ |
cat \$^ > \$@ |
3523 |
|
|
3527 |
|
|
3528 |
# replace stop statements (to avoid the implied unstructured control flow) with print statements |
# replace stop statements (to avoid the implied unstructured control flow) with print statements |
3529 |
ad_input_code_sf.pre.s2p.f90 : ad_input_code_sf.pre.f90 |
ad_input_code_sf.pre.s2p.f90 : ad_input_code_sf.pre.f90 |
3530 |
cat \$< | sed -f \${OADTOOLS}/stop2print.sed > ad_input_code_sf.pre.s2p.f90 |
cat \$< | sed -f \$(OADTOOLS)/stop2print.sed > ad_input_code_sf.pre.s2p.f90 |
3531 |
|
|
3532 |
# F -> WHIRL |
# F -> WHIRL |
3533 |
ad_input_code_sf.pre.s2p.B: ad_input_code_sf.pre.s2p.f90 |
ad_input_code_sf.pre.s2p.B: ad_input_code_sf.pre.s2p.f90 |
3550 |
\${OPEN64ROOT}/whirl2f/whirl2f -FLIST:ftn_file=\$@ -openad \$< |
\${OPEN64ROOT}/whirl2f/whirl2f -FLIST:ftn_file=\$@ -openad \$< |
3551 |
|
|
3552 |
# insert template directives |
# insert template directives |
3553 |
ad_input_code_sf.pre.s2p.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.pre.s2p.xb.x2w.w2f.f$FS90 \${OADTOOLS}/insertTemplateDir.bash |
ad_input_code_sf.pre.s2p.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.pre.s2p.xb.x2w.w2f.f$FS90 \$(OADTOOLS)/insertTemplateDir.bash |
3554 |
\${OADTOOLS}/insertTemplateDir.bash \$< \$@ |
\$(OADTOOLS)/insertTemplateDir.bash \$< \$@ |
3555 |
|
|
3556 |
PPEXTRAS=\$(notdir \$(wildcard \${OADTOOLS}/ad_template.*.F)) ad_inline.F |
PPEXTRAS=\$(notdir \$(wildcard \$(OADTOOLS)/ad_template.*.F)) ad_inline.F |
3557 |
# postprocess F' |
# postprocess F' |
3558 |
postProcess.tag: ad_input_code_sf.pre.s2p.xb.x2w.w2f.td.f$FS90 \$(PPEXTRAS:.F=.f) | w2f__types.f90 |
postProcess.tag: ad_input_code_sf.pre.s2p.xb.x2w.w2f.td.f$FS90 \$(PPEXTRAS:.F=.f) | w2f__types.f90 |
3559 |
\${OPENADFORTTK_BASE}/tools/SourceProcessing/postProcess.py --progress --timing --infoUnitFile w2f__types.f90 --outputFormat=fixed --separateOutput --pathSuffix "" --filenameSuffix "_oad" -m r -i ad_inline.f \$< |
\${OPENADFORTTK_BASE}/tools/SourceProcessing/postProcess.py --progress --timing --infoUnitFile w2f__types.f90 --outputFormat=fixed --separateOutput --pathSuffix "" --filenameSuffix "_oad" -m r -i ad_inline.f \$< |
3568 |
|
|
3569 |
# link the support files: |
# link the support files: |
3570 |
\$(OPENAD_SUPPORT_F90_SRC_FILES) \$(OPENAD_SUPPORT_C_SRC_FILES) \$(PPEXTRAS): |
\$(OPENAD_SUPPORT_F90_SRC_FILES) \$(OPENAD_SUPPORT_C_SRC_FILES) \$(PPEXTRAS): |
3571 |
\$(LN) \${OADTOOLS}/\$@ . |
\$(LN) \$(OADTOOLS)/\$@ . |
3572 |
|
|
3573 |
AD_CLEAN += *_mod.h *_mod.F90 *.FF90 *.mod-whirl temp.sed oad_cp.* postProcess.tag |
AD_CLEAN += *_mod.h *_mod.F90 *.FF90 *.mod-whirl temp.sed oad_cp.* postProcess.tag |
3574 |
|
|