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revision 1.263 by jahn, Mon Jan 6 16:49:10 2014 UTC revision 1.265 by jmc, Fri Apr 4 21:34:01 2014 UTC
# Line 19  Usage: "$0" [OPTIONS] Line 19  Usage: "$0" [OPTIONS]
19      -help | --help | -h | --h      -help | --help | -h | --h
20            Print this help message and exit.            Print this help message and exit.
21    
22        -oad | --oad
23              Generate a Makefile for an OpenAD built
24    
25      -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME      -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
26        -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME        -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
27            Use "NAME" as the adoptfile.  By default, the file at            Use "NAME" as the adoptfile.  By default, the file at
28              "tools/adjoint_options/adjoint_oad" (for OpenAD built) or
29            "tools/adjoint_options/adjoint_default" will be used.            "tools/adjoint_options/adjoint_default" will be used.
30    
31      -nooptfile | --nooptfile      -nooptfile | --nooptfile
# Line 1325  FS= Line 1329  FS=
1329  FS90=  FS90=
1330    
1331  AUTODIFF_PKG_USED=f  AUTODIFF_PKG_USED=f
1332    OPENAD=
1333  AD_OPTFILE=  AD_OPTFILE=
1334  TAF=  TAF=
1335  AD_TAF_FLAGS=  AD_TAF_FLAGS=
# Line 1355  gm_s7="TMP THISHOST THISUSER THISDATE TH Line 1360  gm_s7="TMP THISHOST THISUSER THISDATE TH
1360  gm_s8="HAVE_NETCDF HAVE_SYSTEM HAVE_FDATE HAVE_ETIME HAVE_LAPACK HAVE_FLUSH"  gm_s8="HAVE_NETCDF HAVE_SYSTEM HAVE_FDATE HAVE_ETIME HAVE_LAPACK HAVE_FLUSH"
1361    
1362  #  The following are all related to adjoint/tangent-linear stuff  #  The following are all related to adjoint/tangent-linear stuff
1363  gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"  gm_s10="AUTODIFF_PKG_USED AD_OPTFILE OPENAD TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
1364  gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"  gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"
1365  gm_s12="TAF_EXTRA TAMC_EXTRA DIVA MPIINCLUDEDIR MPI_HEADER_FILES"  gm_s12="TAF_EXTRA TAMC_EXTRA DIVA MPIINCLUDEDIR MPI_HEADER_FILES"
1366    
# Line 1407  for ac_option in "$@" ; do Line 1412  for ac_option in "$@" ; do
1412          -optfile=* | --optfile=* | -of=* | --of=*)          -optfile=* | --optfile=* | -of=* | --of=*)
1413              OPTFILE=$ac_optarg ;;              OPTFILE=$ac_optarg ;;
1414    
1415            -oad | --oad)
1416                OPENAD="true" ;;
1417          -adoptfile | --adoptfile | -adof | --adof)          -adoptfile | --adoptfile | -adof | --adof)
1418              ac_prev=AD_OPTFILE ;;              ac_prev=AD_OPTFILE ;;
1419          -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)          -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
# Line 1680  fi Line 1687  fi
1687    
1688  echo "  getting AD_OPTFILE information:"  echo "  getting AD_OPTFILE information:"
1689  if test "x${AD_OPTFILE}" = x ; then  if test "x${AD_OPTFILE}" = x ; then
1690      if test "x$MITGCM_AD_OF" = x ; then      if test "x$MITGCM_AD_OF" != x ; then
1691            AD_OPTFILE=$MITGCM_AD_OF
1692        elif test "x$OPENAD" = x ; then
1693          AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default          AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default
1694      else      else
1695          AD_OPTFILE=$MITGCM_AD_OF          AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_oad
1696      fi      fi
1697  fi  fi
1698  if test "x${AD_OPTFILE}" != xNONE ; then  if test "x${AD_OPTFILE}" != xNONE ; then
# Line 2964  links: \$(F77_SRC_FILES) \$(C_SRC_FILES) Line 2973  links: \$(F77_SRC_FILES) \$(C_SRC_FILES)
2973    
2974  small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES)  small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES)
2975    
2976  output.txt: \$(EXECUTABLE)  # output.txt: \$(EXECUTABLE)
2977          @printf 'running ... '  #       @printf 'running ... '
2978          @\$(EXECUTABLE) > \$@  #       @\$(EXECUTABLE) > \$@
2979    
2980  # remove most of the files that "make" generates  # remove most of the files that "make" generates
2981  clean:  clean:
# Line 3246  if test "x$OPENAD" != x ; then Line 3255  if test "x$OPENAD" != x ; then
3255  # ============ begin OpenAD specific section ==============  # ============ begin OpenAD specific section ==============
3256    
3257  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
3258    # ... OpenAD ...
3259    
3260  # all the source files linked from the various locations:  # all the source files linked from the various locations:
3261  ALL_LINKED_FILES= \  ALL_LINKED_FILES= \
# Line 3299  rm -f $TMP.adSrcFiles Line 3309  rm -f $TMP.adSrcFiles
3309    
3310  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
3311    
3312  adAll: \$(EXE_AD)  adAll: ad_exe_target
3313  .PHONY: adAll  .PHONY: adAll
3314    
3315    ad_exe_target:
3316            @echo Update AD_CONFIG.h and make \$(EXE_AD)
3317            @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Adjoint version" -bAD_CONFIG_H -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN > ad_config.template
3318            @cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
3319            @-rm -f ad_config.template
3320            \$(MAKE) -f \$(MAKEFILE) \$(EXE_AD)
3321    
3322  CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES))  CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES))
3323    
3324  .PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90)  .PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90)
# Line 3359  AD_OBJ_FILES_S2=\$(AD_OBJ_FILES_S1) \$(N Line 3376  AD_OBJ_FILES_S2=\$(AD_OBJ_FILES_S1) \$(N
3376  small_f: \$(CB2M_F90_PP_SRC_FILES)  small_f: \$(CB2M_F90_PP_SRC_FILES)
3377  .PHONY: small_f  .PHONY: small_f
3378    
3379  ad_output.txt: \$(EXE_AD)  # ad_output.txt: \$(EXE_AD)
3380          @printf 'linking data files ... '  #       @printf 'linking data files ... '
3381          \$(LN) -f ../input_ad/data* ../input_ad/eedata .  #       \$(LN) -f ../input_ad/data* ../input_ad/eedata .
3382          \$(LN) -f ../../global_ocean.90x40x15/input/*.bin .  #       \$(LN) -f ../../global_ocean.90x40x15/input/*.bin .
3383          @printf 'running ... '  #       @printf 'running ... '
3384          @./\$(EXE_AD) > \$@  #       @./\$(EXE_AD) > \$@
3385    
3386  ad_input_code.f$FS90:  \$(CB2M_AD_FILES)  ad_input_code.f$FS90:  \$(CB2M_AD_FILES)
3387          cat \$^ > \$@          cat \$^ > \$@
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