19 |
-help | --help | -h | --h |
-help | --help | -h | --h |
20 |
Print this help message and exit. |
Print this help message and exit. |
21 |
|
|
22 |
|
-oad | --oad |
23 |
|
Generate a Makefile for an OpenAD built |
24 |
|
|
25 |
|
-nocat4ad | -dog4ad | -ncad | -dad |
26 |
|
do not concatenate (cat) source code sent to TAF |
27 |
|
resulting in compilation of multiple files |
28 |
|
|
29 |
-adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME |
-adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME |
30 |
-adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME |
-adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME |
31 |
Use "NAME" as the adoptfile. By default, the file at |
Use "NAME" as the adoptfile. By default, the file at |
32 |
|
"tools/adjoint_options/adjoint_oad" (for OpenAD built) or |
33 |
"tools/adjoint_options/adjoint_default" will be used. |
"tools/adjoint_options/adjoint_default" will be used. |
34 |
|
|
35 |
-nooptfile | --nooptfile |
-nooptfile | --nooptfile |
216 |
expand_pkg_groups() { |
expand_pkg_groups() { |
217 |
new_packages= |
new_packages= |
218 |
if test -r $PKG_GROUPS ; then |
if test -r $PKG_GROUPS ; then |
219 |
cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp |
cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > $TMP.p1 |
220 |
cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp |
cat $TMP.p1 | $AWK '(NF>2 && $2==":"){ print $0 }' > $TMP.p2 |
221 |
matched=0 |
matched=0 |
222 |
for i in $PACKAGES ; do |
for i in $PACKAGES ; do |
223 |
line=`grep "^ *$i" ./p2.tmp` |
line=`grep "^ *$i" $TMP.p2` |
224 |
RETVAL=$? |
RETVAL=$? |
225 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
226 |
matched=1 |
matched=1 |
232 |
fi |
fi |
233 |
done |
done |
234 |
PACKAGES=$new_packages |
PACKAGES=$new_packages |
235 |
rm -f ./p[1,2].tmp |
rm -f $TMP.p[1,2] |
236 |
return $matched |
return $matched |
237 |
else |
else |
238 |
echo "Warning: can't read package groups definition file: $PKG_GROUPS" |
echo "Warning: can't read package groups definition file: $PKG_GROUPS" |
1087 |
} |
} |
1088 |
|
|
1089 |
check_lapack_libs() { |
check_lapack_libs() { |
1090 |
if test ! "x$SKIP_LAPACK_CHECK" = x ; then |
if test "x$CHECK_FOR_LAPACK" = xf ; then return ; fi |
|
return |
|
|
fi |
|
1091 |
echo >> $LOGFILE |
echo >> $LOGFILE |
1092 |
echo "running: check_lapack_libs()" >> $LOGFILE |
echo "running: check_lapack_libs()" >> $LOGFILE |
1093 |
cat <<EOF > genmake_tla.F |
cat <<EOF > genmake_tla.F |
1283 |
DEVEL= |
DEVEL= |
1284 |
HAVE_TEST_L= |
HAVE_TEST_L= |
1285 |
|
|
1286 |
# comment this line out to enable lapack test |
# set this to "t" to enable lapack test |
1287 |
SKIP_LAPACK_CHECK=t |
CHECK_FOR_LAPACK=f |
1288 |
|
|
1289 |
# DEFINES checked by test compilation or command-line |
# DEFINES checked by test compilation or command-line |
1290 |
HAVE_SYSTEM= |
HAVE_SYSTEM= |
1331 |
FS90= |
FS90= |
1332 |
|
|
1333 |
AUTODIFF_PKG_USED=f |
AUTODIFF_PKG_USED=f |
1334 |
|
OPENAD= |
1335 |
AD_OPTFILE= |
AD_OPTFILE= |
1336 |
|
CAT_SRC_FOR_TAF=1 |
1337 |
TAF= |
TAF= |
1338 |
AD_TAF_FLAGS= |
AD_TAF_FLAGS= |
1339 |
FTL_TAF_FLAGS= |
FTL_TAF_FLAGS= |
1359 |
gm_s4="LN S64 LINK PACKAGES INCLUDES FFLAGS FOPTIM" |
gm_s4="LN S64 LINK PACKAGES INCLUDES FFLAGS FOPTIM" |
1360 |
gm_s5="CFLAGS LIBS KPP KFLAGS1 KFLAGS2 KPPFILES NOOPTFILES NOOPTFLAGS" |
gm_s5="CFLAGS LIBS KPP KFLAGS1 KFLAGS2 KPPFILES NOOPTFILES NOOPTFLAGS" |
1361 |
gm_s6="PWD TOOLSDIR SOURCEDIRS INCLUDEDIRS EXEDIR EXECUTABLE EXEHOOK" |
gm_s6="PWD TOOLSDIR SOURCEDIRS INCLUDEDIRS EXEDIR EXECUTABLE EXEHOOK" |
1362 |
gm_s7="THISHOST THISUSER THISDATE THISVER MACHINE FC_NAMEMANGLE" |
gm_s7="TMP THISHOST THISUSER THISDATE THISVER MACHINE FC_NAMEMANGLE" |
1363 |
gm_s8="HAVE_NETCDF HAVE_SYSTEM HAVE_FDATE HAVE_ETIME HAVE_LAPACK HAVE_FLUSH" |
gm_s8="HAVE_NETCDF HAVE_SYSTEM HAVE_FDATE HAVE_ETIME HAVE_LAPACK HAVE_FLUSH" |
1364 |
|
|
1365 |
# The following are all related to adjoint/tangent-linear stuff |
# The following are all related to adjoint/tangent-linear stuff |
1366 |
gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS" |
gm_s10="AUTODIFF_PKG_USED AD_OPTFILE OPENAD TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS" |
1367 |
gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS" |
gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS" |
1368 |
gm_s12="TAF_EXTRA TAMC_EXTRA DIVA MPIINCLUDEDIR MPI_HEADER_FILES" |
gm_s12="TAF_EXTRA TAMC_EXTRA DIVA MPIINCLUDEDIR MPI_HEADER_FILES" |
1369 |
|
|
1415 |
-optfile=* | --optfile=* | -of=* | --of=*) |
-optfile=* | --optfile=* | -of=* | --of=*) |
1416 |
OPTFILE=$ac_optarg ;; |
OPTFILE=$ac_optarg ;; |
1417 |
|
|
1418 |
|
-oad | --oad) |
1419 |
|
OPENAD="true" ; ALWAYS_USE_F90=1 ;; |
1420 |
|
-nocat4ad | -dog4ad | -ncad | -dad) |
1421 |
|
CAT_SRC_FOR_TAF=0 ;; |
1422 |
-adoptfile | --adoptfile | -adof | --adof) |
-adoptfile | --adoptfile | -adof | --adof) |
1423 |
ac_prev=AD_OPTFILE ;; |
ac_prev=AD_OPTFILE ;; |
1424 |
-adoptfile=* | --adoptfile=* | -adof=* | --adof=*) |
-adoptfile=* | --adoptfile=* | -adof=* | --adof=*) |
1588 |
|
|
1589 |
done |
done |
1590 |
|
|
1591 |
|
#TMP=./genmk_$$ |
1592 |
|
#- try to put temporary files in system-local /tmp dir |
1593 |
|
TMP=/tmp/genmk_${USER}_$$ |
1594 |
|
touch $TMP ; retVal=$? |
1595 |
|
if [ $retVal -eq 0 ] ; then |
1596 |
|
if test ! -r $TMP ; then TMP=./genmk_$$ ; fi |
1597 |
|
else |
1598 |
|
TMP=./genmk_$$ |
1599 |
|
fi |
1600 |
|
rm -f $TMP |
1601 |
|
#echo " temp files: $TMP.*" |
1602 |
|
|
1603 |
printf " getting local config information: " |
printf " getting local config information: " |
1604 |
if test -f $gm_local ; then |
if test -f $gm_local ; then |
1605 |
echo "using $gm_local" |
echo "using $gm_local" |
1692 |
|
|
1693 |
echo " getting AD_OPTFILE information:" |
echo " getting AD_OPTFILE information:" |
1694 |
if test "x${AD_OPTFILE}" = x ; then |
if test "x${AD_OPTFILE}" = x ; then |
1695 |
if test "x$MITGCM_AD_OF" = x ; then |
if test "x$MITGCM_AD_OF" != x ; then |
1696 |
|
AD_OPTFILE=$MITGCM_AD_OF |
1697 |
|
elif test "x$OPENAD" = x ; then |
1698 |
AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default |
AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default |
1699 |
else |
else |
1700 |
AD_OPTFILE=$MITGCM_AD_OF |
AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_oad |
1701 |
fi |
fi |
1702 |
fi |
fi |
1703 |
if test "x${AD_OPTFILE}" != xNONE ; then |
if test "x${AD_OPTFILE}" != xNONE ; then |
1964 |
fi |
fi |
1965 |
rm -f genmake_tcomp* |
rm -f genmake_tcomp* |
1966 |
|
|
1967 |
printf " Do we have the etime() command using $FC... " |
printf " Do we have the etime() command using $FC... " |
1968 |
cat > genmake_tcomp.$FS <<EOF |
cat > genmake_tcomp.$FS <<EOF |
1969 |
program hello |
program hello |
1970 |
REAL*4 ACTUAL, TARRAY(2) |
REAL*4 actual, tarray(2) |
1971 |
EXTERNAL ETIME |
actual = -999. |
1972 |
REAL*4 ETIME |
call ETIME( tarray, actual ) |
1973 |
actual = etime( tarray ) |
if ( actual.ge.0. ) then |
1974 |
print *, tarray |
print *, 0, tarray, actual |
1975 |
|
else |
1976 |
|
print *, 1, tarray, actual |
1977 |
|
endif |
1978 |
end |
end |
1979 |
EOF |
EOF |
1980 |
$FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1 |
$FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1 |
1981 |
RETVAL=$? |
RETVAL=$? |
1982 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
1983 |
|
echo -n 'c,' |
1984 |
|
./genmake_tcomp > genmake_tcomp.out 2>&1 |
1985 |
|
RETVAL=$? |
1986 |
|
fi |
1987 |
|
if test "x$RETVAL" = x0 ; then |
1988 |
|
echo -n 'r:' |
1989 |
|
RETVAL=`cat genmake_tcomp.out | $AWK '{print $1}'` |
1990 |
|
fi |
1991 |
|
if test "x$RETVAL" = x0 ; then |
1992 |
HAVE_ETIME=t |
HAVE_ETIME=t |
1993 |
DEFINES="$DEFINES -DHAVE_ETIME" |
DEFINES="$DEFINES -DHAVE_ETIME" |
1994 |
echo "yes" |
echo " yes" |
1995 |
else |
else |
1996 |
HAVE_ETIME= |
HAVE_ETIME= |
1997 |
echo "no" |
echo " no" |
1998 |
fi |
fi |
1999 |
|
#mkdir chk_etime ; cp -p -f genmake_tcomp* chk_etime |
2000 |
rm -f genmake_tcomp* |
rm -f genmake_tcomp* |
2001 |
|
|
2002 |
printf " Can we call simple C routines (here, \"cloc()\") using $FC... " |
printf " Can we call simple C routines (here, \"cloc()\") using $FC... " |
2276 |
fi |
fi |
2277 |
|
|
2278 |
echo " applying DISABLE settings" |
echo " applying DISABLE settings" |
2279 |
echo "" > ./.tmp_pack |
echo "" > $TMP.pack |
2280 |
for i in $PACKAGES ; do |
for i in $PACKAGES ; do |
2281 |
echo $i >> ./.tmp_pack |
echo $i >> $TMP.pack |
2282 |
done |
done |
2283 |
for i in `grep "-" ./.tmp_pack` ; do |
for i in `grep "-" $TMP.pack` ; do |
2284 |
j=`echo $i | sed 's/[-]//'` |
j=`echo $i | sed 's/[-]//'` |
2285 |
DISABLE="$DISABLE $j" |
DISABLE="$DISABLE $j" |
2286 |
done |
done |
2298 |
done |
done |
2299 |
PACKAGES="$pack" |
PACKAGES="$pack" |
2300 |
echo " applying ENABLE settings" |
echo " applying ENABLE settings" |
2301 |
echo "" > ./.tmp_pack |
echo "" > $TMP.pack |
2302 |
PACKAGES="$PACKAGES $ENABLE" |
PACKAGES="$PACKAGES $ENABLE" |
2303 |
# Test if each explicitly referenced package exists |
# Test if each explicitly referenced package exists |
2304 |
for i in $PACKAGES ; do |
for i in $PACKAGES ; do |
2307 |
echo "Error: dir '$ROOTDIR/pkg/$i' missing for package '$i'" |
echo "Error: dir '$ROOTDIR/pkg/$i' missing for package '$i'" |
2308 |
exit 1 |
exit 1 |
2309 |
fi |
fi |
2310 |
echo $i >> ./.tmp_pack |
echo $i >> $TMP.pack |
2311 |
done |
done |
2312 |
PACKAGES= |
PACKAGES= |
2313 |
for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do |
for i in `grep -v "-" $TMP.pack | sort | uniq` ; do |
2314 |
PACKAGES="$PACKAGES $i" |
PACKAGES="$PACKAGES $i" |
2315 |
done |
done |
2316 |
rm -f ./.tmp_pack |
rm -f $TMP.pack |
2317 |
echo " packages are: $PACKAGES" |
echo " packages are: $PACKAGES" |
2318 |
|
|
2319 |
# Check for package MNC: if NetCDF is available, then build the MNC |
# Check for package MNC: if NetCDF is available, then build the MNC |
2383 |
fi |
fi |
2384 |
fi |
fi |
2385 |
|
|
2386 |
# Check for package RADTRANS: if LAPACK is not available, |
# Make sure the openad package is enabled if using OpenAD |
2387 |
# then issue a warning that the direct radtrans solver is not available. |
if test "x$OPENAD" != x ; then |
2388 |
if test "x$HAVE_LAPACK" != xt ; then |
echo " $PACKAGES " | grep ' openad ' > /dev/null 2>&1 |
|
echo " $PACKAGES " | grep ' radtrans ' > /dev/null 2>&1 |
|
2389 |
RETVAL=$? |
RETVAL=$? |
2390 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" != x0 ; then |
2391 |
cat <<EOF |
cat <<EOF |
|
********************************************************************* |
|
|
WARNING: the "radtrans" package was enabled but tests failed to |
|
|
compile LAPACK applications. This means that the direct radtrans |
|
|
solver is not available and compilation will fail if it is enabled. |
|
|
If you want to use the direct solver, please check that: |
|
2392 |
|
|
|
1) LAPACK is correctly installed for this compiler and |
|
|
2) the LIBS variable (within the "optfile") specifies the correct |
|
|
LAPACK library to link against. |
|
2393 |
********************************************************************* |
********************************************************************* |
2394 |
|
ERROR: when generating an adjoint with OpenAD, the openad package |
2395 |
|
must be enabled. Please add it to packages.conf. |
2396 |
|
********************************************************************* |
2397 |
|
|
2398 |
EOF |
EOF |
2399 |
|
exit 1 |
2400 |
fi |
fi |
2401 |
fi |
fi |
2402 |
|
|
2588 |
|
|
2589 |
# Here, we build the list of files to be "run through" the adjoint |
# Here, we build the list of files to be "run through" the adjoint |
2590 |
# compiler. |
# compiler. |
2591 |
if test -f ./adSrcFiles.tmp ; then |
if test -f $TMP.adSrcFiles ; then |
2592 |
rm -f ./adSrcFiles.tmp |
rm -f $TMP.adSrcFiles |
2593 |
fi |
fi |
2594 |
echo " Creating the list of files for the adjoint compiler." |
echo " Creating the list of files for the adjoint compiler." |
2595 |
touch adSrcFiles.tmp |
touch $TMP.adSrcFiles |
2596 |
for i in $SOURCEDIRS ; do |
for i in $SOURCEDIRS ; do |
2597 |
list_files=`( cd $i && ls -1 *.list 2>/dev/null )` |
list_files=`( cd $i && ls -1 *.list 2>/dev/null )` |
2598 |
for j in $list_files ; do |
for j in $list_files ; do |
2599 |
cat $i/$j >> adSrcFiles.tmp |
cat $i/$j >> $TMP.adSrcFiles |
2600 |
done |
done |
2601 |
done |
done |
2602 |
if test ! "x"$FS = "x.f" ; then |
if test ! "x"$FS = "x.f" ; then |
2603 |
cat adSrcFiles.tmp | sed -e "s/\.f/.$FS/g" > adSrcFiles.tmp_f |
cat $TMP.adSrcFiles | sed -e "s/\.f/.$FS/g" > $TMP.adSrcFiles_f |
2604 |
mv -f adSrcFiles.tmp_f adSrcFiles.tmp |
mv -f $TMP.adSrcFiles_f $TMP.adSrcFiles |
2605 |
fi |
fi |
2606 |
|
|
2607 |
echo |
echo |
2623 |
fi |
fi |
2624 |
|
|
2625 |
echo " Determining the list of source and include files" |
echo " Determining the list of source and include files" |
2626 |
rm -rf .links.tmp |
rm -rf $TMP.links |
2627 |
mkdir .links.tmp |
mkdir $TMP.links |
2628 |
touch .links.tmp/foo |
touch $TMP.links/foo |
2629 |
if test ! -r ".links.tmp/foo" ; then |
if test ! -r "$TMP.links/foo" ; then |
2630 |
echo |
echo |
2631 |
echo "ERROR : something is wrong with your directory permissions or" |
echo "ERROR : something is wrong with your directory permissions or" |
2632 |
echo " your user file-creation mask (\"umask\") since creating a" |
echo " your user file-creation mask (\"umask\") since creating a" |
2642 |
echo |
echo |
2643 |
exit 1 |
exit 1 |
2644 |
fi |
fi |
2645 |
rm -f .links.tmp/foo |
rm -f $TMP.links/foo |
2646 |
|
|
2647 |
if test "x$OPENAD" != x ; then |
if test "x$OPENAD" != x ; then |
2648 |
OAD_DONT_COMPILE="/dev/null" |
OAD_DONT_COMPILE="/dev/null" |
2651 |
OAD_CB2M_FILES="/dev/null" |
OAD_CB2M_FILES="/dev/null" |
2652 |
OADTOOLS="$TOOLSDIR/OAD_support" |
OADTOOLS="$TOOLSDIR/OAD_support" |
2653 |
echo " looking for dontCompile file: " |
echo " looking for dontCompile file: " |
2654 |
for i in "." $MODS ; do |
for i in "." $MODS $OADTOOLS ; do |
2655 |
if test -r $i"/dontCompile" ; then |
if test -r $i"/dontCompile" ; then |
2656 |
OAD_DONT_COMPILE=$i"/dontCompile" |
OAD_DONT_COMPILE=$i"/dontCompile" |
2657 |
echo " found $OAD_DONT_COMPILE" |
echo " found $OAD_DONT_COMPILE" |
2659 |
fi |
fi |
2660 |
done |
done |
2661 |
echo " looking for dontTransform file: " |
echo " looking for dontTransform file: " |
2662 |
for i in "." $MODS ; do |
for i in "." $MODS $OADTOOLS ; do |
2663 |
if test -r $i"/dontTransform" ; then |
if test -r $i"/dontTransform" ; then |
2664 |
OAD_DONT_TRANSFORM=$i"/dontTransform" |
OAD_DONT_TRANSFORM=$i"/dontTransform" |
2665 |
echo " found $OAD_DONT_TRANSFORM" |
echo " found $OAD_DONT_TRANSFORM" |
2667 |
fi |
fi |
2668 |
done |
done |
2669 |
echo " looking for keepOriginal file: " |
echo " looking for keepOriginal file: " |
2670 |
for i in "." $MODS ; do |
for i in "." $MODS $OADTOOLS ; do |
2671 |
if test -r $i"/keepOriginal" ; then |
if test -r $i"/keepOriginal" ; then |
2672 |
OAD_KEEP_ORIGINAL=$i"/keepOriginal" |
OAD_KEEP_ORIGINAL=$i"/keepOriginal" |
2673 |
echo " found $OAD_KEEP_ORIGINAL" |
echo " found $OAD_KEEP_ORIGINAL" |
2675 |
fi |
fi |
2676 |
done |
done |
2677 |
echo " looking for cb2mFiles: " |
echo " looking for cb2mFiles: " |
2678 |
for i in "." $MODS ; do |
for i in "." $MODS $OADTOOLS ; do |
2679 |
if test -r $i"/cb2mFiles" ; then |
if test -r $i"/cb2mFiles" ; then |
2680 |
OAD_CB2M_FILES=$i"/cb2mFiles" |
OAD_CB2M_FILES=$i"/cb2mFiles" |
2681 |
echo " found $OAD_CB2M_FILES" |
echo " found $OAD_CB2M_FILES" |
2685 |
echo " OpenAD exceptions: " |
echo " OpenAD exceptions: " |
2686 |
fi |
fi |
2687 |
|
|
2688 |
echo "# This section creates symbolic links" > srclinks.tmp |
echo "# This section creates symbolic links" > $TMP.srclinks |
2689 |
echo "" >> srclinks.tmp |
echo "" >> $TMP.srclinks |
2690 |
printf 'F77_SRC_FILES = ' > F77srclist.tmp |
printf 'F77_SRC_FILES = ' > $TMP.F77srclist |
2691 |
printf 'NON_AD_F77_SRC_FILES = ' > nonADF77srclist.tmp |
printf 'NON_AD_F77_SRC_FILES = ' > $TMP.nonADF77srclist |
2692 |
printf 'C_SRC_FILES = ' > csrclist.tmp |
printf 'C_SRC_FILES = ' > $TMP.csrclist |
2693 |
printf 'F90_SRC_FILES = ' > F90srclist.tmp |
printf 'F90_SRC_FILES = ' > $TMP.F90srclist |
2694 |
printf 'H_SRC_FILES = ' > hsrclist.tmp |
printf 'H_SRC_FILES = ' > $TMP.hsrclist |
2695 |
printf 'AD_FLOW_FILES = ' > ad_flow_files.tmp |
printf 'AD_FLOW_FILES = ' > $TMP.ad_flow_files |
2696 |
alldirs="$SOURCEDIRS $INCLUDEDIRS ." |
alldirs="$SOURCEDIRS $INCLUDEDIRS ." |
2697 |
for d in $alldirs ; do |
for d in $alldirs ; do |
2698 |
deplist= |
deplist= |
2702 |
sfiles=`( echo $sfiles | grep -v _cb2m\. )` |
sfiles=`( echo $sfiles | grep -v _cb2m\. )` |
2703 |
fi |
fi |
2704 |
for sf in $sfiles ; do |
for sf in $sfiles ; do |
2705 |
if test ! -r ".links.tmp/$sf" ; then |
if test ! -r "$TMP.links/$sf" ; then |
2706 |
if test -f "$d/$sf" ; then |
if test -f "$d/$sf" ; then |
2707 |
ignore_f=f |
ignore_f=f |
2708 |
case $d/$sf in |
case $d/$sf in |
2727 |
if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then |
if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then |
2728 |
ignore_f=t |
ignore_f=t |
2729 |
else |
else |
2730 |
touch .links.tmp/$sf |
touch $TMP.links/$sf |
2731 |
deplist="$deplist $sf" |
deplist="$deplist $sf" |
2732 |
fi |
fi |
2733 |
;; |
;; |
2736 |
extn=`echo $sf | $AWK -F. '{print $NF}'` |
extn=`echo $sf | $AWK -F. '{print $NF}'` |
2737 |
case $extn in |
case $extn in |
2738 |
F) |
F) |
2739 |
echo " \\" >> F77srclist.tmp |
echo " \\" >> $TMP.F77srclist |
2740 |
printf " $sf" >> F77srclist.tmp |
printf " $sf" >> $TMP.F77srclist |
2741 |
if test "x$OPENAD" = x ; then |
if test "x$OPENAD" = x ; then |
2742 |
basename=${sf%%.F} |
basename=${sf%%.F} |
2743 |
isAD=`egrep ^$basename.f'[ ]*' adSrcFiles.tmp` |
isAD=`egrep ^$basename.f'[ ]*' $TMP.adSrcFiles` |
2744 |
if test -z "$isAD" ; then |
if test -z "$isAD" ; then |
2745 |
echo " \\" >> nonADF77srclist.tmp |
echo " \\" >> $TMP.nonADF77srclist |
2746 |
printf " $sf" >> nonADF77srclist.tmp |
printf " $sf" >> $TMP.nonADF77srclist |
2747 |
fi |
fi |
2748 |
else #- OpenAD case: |
else #- OpenAD case: |
2749 |
basename=${sf%%.F} |
basename=${sf%%.F} |
2750 |
isAD=`egrep ^$basename.f'[ ]*' adSrcFiles.tmp` |
isAD=`egrep ^$basename.f'[ ]*' $TMP.adSrcFiles` |
2751 |
if test -z "$isAD" ; then |
if test -z "$isAD" ; then |
2752 |
toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE}` |
toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE}` |
2753 |
if test -z "$toBeIgnored" ; then |
if test -z "$toBeIgnored" ; then |
2754 |
echo " \\" >> nonADF77srclist.tmp |
echo " \\" >> $TMP.nonADF77srclist |
2755 |
printf " $sf" >> nonADF77srclist.tmp |
printf " $sf" >> $TMP.nonADF77srclist |
2756 |
else |
else |
2757 |
echo " not to be compiled : $sf" |
echo " not to be compiled : $sf" |
2758 |
fi |
fi |
2767 |
echo " original to be kept : $sf" |
echo " original to be kept : $sf" |
2768 |
fi |
fi |
2769 |
if test -n "$notToBeTransformed" -o -n "$untransformedVersionToBeKept" ; then |
if test -n "$notToBeTransformed" -o -n "$untransformedVersionToBeKept" ; then |
2770 |
echo " \\" >> nonADF77srclist.tmp |
echo " \\" >> $TMP.nonADF77srclist |
2771 |
printf " $sf" >> nonADF77srclist.tmp |
printf " $sf" >> $TMP.nonADF77srclist |
2772 |
fi |
fi |
2773 |
fi |
fi |
2774 |
fi |
fi |
2775 |
;; |
;; |
2776 |
F90) |
F90) |
2777 |
echo " \\" >> F90srclist.tmp |
echo " \\" >> $TMP.F90srclist |
2778 |
printf " $sf" >> F90srclist.tmp |
printf " $sf" >> $TMP.F90srclist |
2779 |
;; |
;; |
2780 |
c) |
c) |
2781 |
echo " \\" >> csrclist.tmp |
echo " \\" >> $TMP.csrclist |
2782 |
printf " $sf" >> csrclist.tmp |
printf " $sf" >> $TMP.csrclist |
2783 |
;; |
;; |
2784 |
h) |
h) |
2785 |
echo " \\" >> hsrclist.tmp |
echo " \\" >> $TMP.hsrclist |
2786 |
printf " $sf" >> hsrclist.tmp |
printf " $sf" >> $TMP.hsrclist |
2787 |
;; |
;; |
2788 |
flow) |
flow) |
2789 |
echo " \\" >> ad_flow_files.tmp |
echo " \\" >> $TMP.ad_flow_files |
2790 |
printf " $sf" >> ad_flow_files.tmp |
printf " $sf" >> $TMP.ad_flow_files |
2791 |
;; |
;; |
2792 |
esac |
esac |
2793 |
fi |
fi |
2796 |
done |
done |
2797 |
if test "x$deplist" != x ; then |
if test "x$deplist" != x ; then |
2798 |
if test "$d" != "." ; then |
if test "$d" != "." ; then |
2799 |
echo "" >> srclinks.tmp |
echo "" >> $TMP.srclinks |
2800 |
echo "# These files are linked from $d" >> srclinks.tmp |
echo "# These files are linked from $d" >> $TMP.srclinks |
2801 |
echo "$deplist :" >> srclinks.tmp |
echo "$deplist :" >> $TMP.srclinks |
2802 |
# We need to make sure that the link isn't already there. |
# We need to make sure that the link isn't already there. |
2803 |
# This may happen when make thinks that a header file has to be "remade" |
# This may happen when make thinks that a header file has to be "remade" |
2804 |
# because a module it depends on has changed. In this case we do nothing. |
# because a module it depends on has changed. In this case we do nothing. |
2805 |
printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> srclinks.tmp |
printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> $TMP.srclinks |
2806 |
fi |
fi |
2807 |
fi |
fi |
2808 |
done |
done |
2809 |
rm -rf .links.tmp |
rm -rf $TMP.links |
2810 |
echo "" >> F77srclist.tmp |
echo "" >> $TMP.F77srclist |
2811 |
echo "" >> nonADF77srclist.tmp |
echo "" >> $TMP.nonADF77srclist |
2812 |
echo "" >> csrclist.tmp |
echo "" >> $TMP.csrclist |
2813 |
echo "" >> F90srclist.tmp |
echo "" >> $TMP.F90srclist |
2814 |
echo "" >> hsrclist.tmp |
echo "" >> $TMP.hsrclist |
2815 |
echo "" >> ad_flow_files.tmp |
echo "" >> $TMP.ad_flow_files |
2816 |
|
|
2817 |
CMDLINE=$0 |
CMDLINE=$0 |
2818 |
for xx in "$@" ; do nw=`echo $xx | wc -w` |
for xx in "$@" ; do nw=`echo $xx | wc -w` |
2914 |
KFLAGS1 = ${KFLAGS1} |
KFLAGS1 = ${KFLAGS1} |
2915 |
KFLAGS2 = ${KFLAGS2} |
KFLAGS2 = ${KFLAGS2} |
2916 |
# Optim./debug for FC |
# Optim./debug for FC |
2917 |
FFLAGS = ${FFLAGS} ${FEXTRAFLAGS} |
FFLAGS = ${FFLAGS} |
2918 |
FOPTIM = ${FOPTIM} |
FOPTIM = ${FOPTIM} ${FEXTRAFLAGS} |
2919 |
# Optim./debug for FC |
# Optim./debug for FC |
2920 |
F90FLAGS = ${F90FLAGS} |
F90FLAGS = ${F90FLAGS} |
2921 |
F90OPTIM = ${F90OPTIM} |
F90OPTIM = ${F90OPTIM} |
2934 |
|
|
2935 |
EOF |
EOF |
2936 |
|
|
2937 |
cat F77srclist.tmp >> $MAKEFILE |
cat $TMP.F77srclist >> $MAKEFILE |
2938 |
cat nonADF77srclist.tmp >> $MAKEFILE |
cat $TMP.nonADF77srclist >> $MAKEFILE |
2939 |
cat csrclist.tmp >> $MAKEFILE |
cat $TMP.csrclist >> $MAKEFILE |
2940 |
cat F90srclist.tmp >> $MAKEFILE |
cat $TMP.F90srclist >> $MAKEFILE |
2941 |
cat hsrclist.tmp >> $MAKEFILE |
cat $TMP.hsrclist >> $MAKEFILE |
2942 |
cat ad_flow_files.tmp >> $MAKEFILE |
cat $TMP.ad_flow_files >> $MAKEFILE |
2943 |
|
|
2944 |
rm -f F77srclist.tmp nonADF77srclist.tmp csrclist.tmp F90srclist.tmp hsrclist.tmp ad_flow_files.tmp |
rm -f $TMP.F77srclist $TMP.nonADF77srclist $TMP.csrclist $TMP.F90srclist $TMP.hsrclist $TMP.ad_flow_files |
2945 |
|
|
2946 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
2947 |
|
|
2991 |
|
|
2992 |
small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES) |
small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES) |
2993 |
|
|
|
output.txt: \$(EXECUTABLE) |
|
|
@printf 'running ... ' |
|
|
@\$(EXECUTABLE) > \$@ |
|
|
|
|
2994 |
# remove most of the files that "make" generates |
# remove most of the files that "make" generates |
2995 |
clean: |
clean: |
2996 |
-rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template |
-rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template |
3134 |
echo " Add the source list for AD code generation" |
echo " Add the source list for AD code generation" |
3135 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
3136 |
printf "AD_FILES = " >> $MAKEFILE |
printf "AD_FILES = " >> $MAKEFILE |
3137 |
AD_FILES=`cat adSrcFiles.tmp` |
AD_FILES=`cat $TMP.adSrcFiles` |
3138 |
for i in $AD_FILES ; do |
for i in $AD_FILES ; do |
3139 |
echo " \\" >> $MAKEFILE |
echo " \\" >> $MAKEFILE |
3140 |
printf " $i" >> $MAKEFILE |
printf " $i" >> $MAKEFILE |
3141 |
done |
done |
3142 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
3143 |
rm -f adSrcFiles.tmp |
rm -f $TMP.adSrcFiles |
3144 |
|
|
3145 |
|
if test $CAT_SRC_FOR_TAF = 0 ; then |
3146 |
|
cat >>$MAKEFILE <<EOF |
3147 |
|
|
3148 |
|
# ... Utilities ... |
3149 |
|
remove_comments: |
3150 |
|
sed -i.bak -f \$(TOOLSDIR)/remove_comments_sed \$(AD_FILES) |
3151 |
|
@-rm -f \$(AD_FILES:.$FS=.$FS.bak) |
3152 |
|
adj_sed: |
3153 |
|
sed -i.bak -f \$(TOOLSDIR)/adjoint_sed \$(AD_FILES:.$FS=_ad.$FS) |
3154 |
|
@-rm -f \$(AD_FILES:.$FS=_ad.$FS.bak) |
3155 |
|
ftl_sed: |
3156 |
|
sed -i.bak -f \$(TOOLSDIR)/adjoint_sed \$(AD_FILES:.$FS=_tl.$FS) |
3157 |
|
@-rm -f \$(AD_FILES:.$FS=_tl.$FS.bak) |
3158 |
|
adobjfiles: \$(AD_FILES:.$FS=_ad.o) |
3159 |
|
ftlobjfiles: \$(AD_FILES:.$FS=_tl.o) |
3160 |
|
EOF |
3161 |
|
fi |
3162 |
|
|
3163 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
3164 |
|
|
3182 |
@\$(MAKE) -f \$(MAKEFILE) \$(FLOWFILES) |
@\$(MAKE) -f \$(MAKEFILE) \$(FLOWFILES) |
3183 |
cat \$(FLOWFILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ad_input_code.$FS |
cat \$(FLOWFILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ad_input_code.$FS |
3184 |
|
|
3185 |
ad_taf_output.$FS: ad_input_code.$FS |
adtafonly: |
|
@-rm -f ad_input_code_ad.$FS |
|
3186 |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
3187 |
ls -l ad_input_code_ad.$FS |
ls -l ad_input_code_ad.$FS |
3188 |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
3189 |
|
|
3190 |
adtafonly: |
EOF |
3191 |
|
|
3192 |
|
if test $CAT_SRC_FOR_TAF = 1 ; then |
3193 |
|
cat >>$MAKEFILE <<EOF |
3194 |
|
# ... send 1 file to TAF ... |
3195 |
|
ad_taf_output.$FS: ad_input_code.$FS |
3196 |
|
@-rm -f ad_input_code_ad.$FS ; echo '' |
3197 |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
3198 |
ls -l ad_input_code_ad.$FS |
ls -l ad_input_code_ad.$FS |
3199 |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
3201 |
\$(EXE_AD): \$(SPECIAL_FILES) \$(H_SRC_FILES) ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
\$(EXE_AD): \$(SPECIAL_FILES) \$(H_SRC_FILES) ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
3202 |
\$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
\$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
3203 |
|
|
3204 |
ad_tamc_output.$FS: ad_input_code.$FS |
adobj: ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) |
|
\$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS |
|
|
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS |
|
3205 |
|
|
3206 |
ad_tamc: ad_tamc_output.o \$(OBJFILES) |
EOF |
|
\$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS) |
|
3207 |
|
|
3208 |
|
else |
3209 |
|
cat >>$MAKEFILE <<EOF |
3210 |
|
# ... send multiple files to TAF ... |
3211 |
|
ad_taf_output.$FS: \$(AD_FLOW_FILES) \$(AD_FILES) |
3212 |
|
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Adjoint version" -bAD_CONFIG_H -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN > ad_config.template |
3213 |
|
cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h |
3214 |
|
@-rm -f ad_config.template |
3215 |
|
@\$(MAKE) -f \$(MAKEFILE) \$(F77_PP_SRC_FILES) |
3216 |
|
@\$(MAKE) -f \$(MAKEFILE) \$(FLOWFILES) |
3217 |
|
@-rm -f \$(AD_FILES:.$FS=_ad.$FS) \$(AD_FILES:.$FS=_ad.o); echo '' |
3218 |
|
\$(MAKE) -f \$(MAKEFILE) remove_comments |
3219 |
|
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) \$(FLOWFILES) \$(AD_FILES) |
3220 |
|
\$(MAKE) -f \$(MAKEFILE) adj_sed |
3221 |
|
cat \$(AD_FILES:.$FS=_ad.$FS) > ad_taf_output.$FS |
3222 |
|
|
3223 |
|
\$(EXE_AD): \$(SPECIAL_FILES) \$(H_SRC_FILES) ad_taf_output.$FS \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
3224 |
|
\$(MAKE) -f \$(MAKEFILE) adobjfiles |
3225 |
|
\$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(AD_FILES:.$FS=_ad.o) \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
3226 |
|
|
3227 |
|
adobj: ad_taf_output.$FS \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) |
3228 |
|
\$(MAKE) -f \$(MAKEFILE) adobjfiles |
3229 |
|
|
3230 |
|
EOF |
3231 |
|
fi |
3232 |
|
|
3233 |
|
cat >>$MAKEFILE <<EOF |
3234 |
adonlyfwd: |
adonlyfwd: |
3235 |
patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff |
patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff |
3236 |
|
|
3237 |
adtrick: |
adtrick: |
3238 |
patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff |
patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff |
3239 |
|
|
3240 |
adobj: ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) |
ad_tamc_output.$FS: ad_input_code.$FS |
3241 |
|
\$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS |
3242 |
|
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS |
3243 |
|
|
3244 |
|
ad_tamc: ad_tamc_output.o \$(OBJFILES) |
3245 |
|
\$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS) |
3246 |
|
|
3247 |
# ... FTL ... |
# ... FTL ... |
3248 |
ftlall: ftl_exe_target |
ftlall: ftl_exe_target |
3264 |
@\$(MAKE) -f \$(MAKEFILE) \$(AD_FLOW_FILES) |
@\$(MAKE) -f \$(MAKEFILE) \$(AD_FLOW_FILES) |
3265 |
cat \$(AD_FLOW_FILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ftl_input_code.$FS |
cat \$(AD_FLOW_FILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ftl_input_code.$FS |
3266 |
|
|
3267 |
ftl_taf_output.$FS: ftl_input_code.$FS |
ftltafonly: |
|
@-rm -f ftl_input_code_tl.$FS |
|
3268 |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
3269 |
ls -l ftl_input_code_tl.$FS |
ls -l ftl_input_code_tl.$FS |
3270 |
cat ftl_input_code_tl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
cat ftl_input_code_tl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
3271 |
|
|
3272 |
ftltafonly: |
EOF |
3273 |
|
|
3274 |
|
if test $CAT_SRC_FOR_TAF = 1 ; then |
3275 |
|
cat >>$MAKEFILE <<EOF |
3276 |
|
# ... send 1 file to TAF ... |
3277 |
|
ftl_taf_output.$FS: ftl_input_code.$FS |
3278 |
|
@-rm -f ftl_input_code_tl.$FS ; echo '' |
3279 |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
3280 |
ls -l ftl_input_code_tl.$FS |
ls -l ftl_input_code_tl.$FS |
3281 |
cat ftl_input_code_tl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
cat ftl_input_code_tl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
3283 |
\$(EXE_FTL): \$(SPECIAL_FILES) \$(H_SRC_FILES) ftl_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
\$(EXE_FTL): \$(SPECIAL_FILES) \$(H_SRC_FILES) ftl_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
3284 |
\$(LINK) -o \${EXE_FTL} \$(FFLAGS) \$(FOPTIM) ftl_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
\$(LINK) -o \${EXE_FTL} \$(FFLAGS) \$(FOPTIM) ftl_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
3285 |
|
|
3286 |
|
EOF |
3287 |
|
|
3288 |
|
else |
3289 |
|
cat >>$MAKEFILE <<EOF |
3290 |
|
# ... send multiple files to TAF ... |
3291 |
|
ftl_taf_output.$FS: \$(AD_FLOW_FILES) \$(AD_FILES) |
3292 |
|
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "TangLin version" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN > ad_config.template |
3293 |
|
cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h |
3294 |
|
@-rm -f ad_config.template |
3295 |
|
@\$(MAKE) -f \$(MAKEFILE) \$(F77_PP_SRC_FILES) |
3296 |
|
@\$(MAKE) -f \$(MAKEFILE) \$(AD_FLOW_FILES) |
3297 |
|
@-rm -f \$(AD_FILES:.$FS=_tl.$FS) \$(AD_FILES:.$FS=_tl.o); echo '' |
3298 |
|
\$(MAKE) -f \$(MAKEFILE) remove_comments |
3299 |
|
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) \$(AD_FLOW_FILES) \$(AD_FILES) |
3300 |
|
\$(MAKE) -f \$(MAKEFILE) ftl_sed |
3301 |
|
cat \$(AD_FILES:.$FS=_tl.$FS) > ftl_taf_output.$FS |
3302 |
|
|
3303 |
|
\$(EXE_FTL): \$(SPECIAL_FILES) \$(H_SRC_FILES) ftl_taf_output.$FS \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
3304 |
|
\$(MAKE) -f \$(MAKEFILE) ftlobjfiles |
3305 |
|
\$(LINK) -o \${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(AD_FILES:.$FS=_tl.o) \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
3306 |
|
|
3307 |
|
EOF |
3308 |
|
fi |
3309 |
|
|
3310 |
|
cat >>$MAKEFILE <<EOF |
3311 |
ftl_tamc_output.$FS: ftl_input_code.$FS |
ftl_tamc_output.$FS: ftl_input_code.$FS |
3312 |
\$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS |
\$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS |
3313 |
cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS |
cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS |
3350 |
# ============ begin OpenAD specific section ============== |
# ============ begin OpenAD specific section ============== |
3351 |
|
|
3352 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
3353 |
|
# ... OpenAD ... |
3354 |
|
|
3355 |
# all the source files linked from the various locations: |
# all the source files linked from the various locations: |
3356 |
ALL_LINKED_FILES= \ |
ALL_LINKED_FILES= \ |
3390 |
echo " \\" >> $MAKEFILE |
echo " \\" >> $MAKEFILE |
3391 |
printf " ${i}_mod.f$FS90" >> $MAKEFILE |
printf " ${i}_mod.f$FS90" >> $MAKEFILE |
3392 |
done |
done |
3393 |
AD_FILES=`cat adSrcFiles.tmp` |
AD_FILES=`cat $TMP.adSrcFiles` |
3394 |
for i in $AD_FILES ; do |
for i in $AD_FILES ; do |
3395 |
basename=${i%%.f} |
basename=${i%%.f} |
3396 |
toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE} ${OAD_DONT_TRANSFORM}` |
toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE} ${OAD_DONT_TRANSFORM}` |
3400 |
fi |
fi |
3401 |
done |
done |
3402 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
3403 |
rm -f adSrcFiles.tmp |
rm -f $TMP.adSrcFiles |
3404 |
|
|
3405 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
3406 |
|
|
3407 |
adAll: \$(EXE_AD) |
adAll: ad_exe_target |
3408 |
.PHONY: adAll |
.PHONY: adAll |
3409 |
|
|
3410 |
|
ad_exe_target: |
3411 |
|
@echo Update AD_CONFIG.h and make \$(EXE_AD) |
3412 |
|
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Adjoint version" -bAD_CONFIG_H -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN > ad_config.template |
3413 |
|
@cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h |
3414 |
|
@-rm -f ad_config.template |
3415 |
|
\$(MAKE) -f \$(MAKEFILE) \$(EXE_AD) |
3416 |
|
|
3417 |
CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES)) |
CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES)) |
3418 |
|
|
3419 |
.PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90) |
.PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90) |
3430 |
OAD_cp.F90 \ |
OAD_cp.F90 \ |
3431 |
OAD_rev.F90 \ |
OAD_rev.F90 \ |
3432 |
OAD_tape.F90 \ |
OAD_tape.F90 \ |
3433 |
|
OAD_regular_cp.F90 \ |
3434 |
revolve.F90 |
revolve.F90 |
3435 |
|
|
3436 |
OPENAD_SUPPORT_C_SRC_FILES = \ |
OPENAD_SUPPORT_C_SRC_FILES = \ |
3472 |
small_f: \$(CB2M_F90_PP_SRC_FILES) |
small_f: \$(CB2M_F90_PP_SRC_FILES) |
3473 |
.PHONY: small_f |
.PHONY: small_f |
3474 |
|
|
|
ad_output.txt: \$(EXE_AD) |
|
|
@printf 'linking data files ... ' |
|
|
\$(LN) -f ../input_ad/data* ../input_ad/eedata . |
|
|
\$(LN) -f ../../global_ocean.90x40x15/input/*.bin . |
|
|
@printf 'running ... ' |
|
|
@./\$(EXE_AD) > \$@ |
|
|
|
|
3475 |
ad_input_code.f$FS90: \$(CB2M_AD_FILES) |
ad_input_code.f$FS90: \$(CB2M_AD_FILES) |
3476 |
cat \$^ > \$@ |
cat \$^ > \$@ |
3477 |
|
|
3560 |
done |
done |
3561 |
|
|
3562 |
echo " Add rules for links" |
echo " Add rules for links" |
3563 |
cat srclinks.tmp >> $MAKEFILE |
cat $TMP.srclinks >> $MAKEFILE |
3564 |
rm -f srclinks.tmp |
rm -f $TMP.srclinks |
3565 |
|
|
3566 |
echo " Adding makedepend marker" |
echo " Adding makedepend marker" |
3567 |
printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE |
printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE |