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revision 1.157 by heimbach, Sat Nov 4 21:01:37 2006 UTC revision 1.166 by jmc, Mon Oct 29 20:47:42 2007 UTC
# Line 325  find_possible_configs()  { Line 325  find_possible_configs()  {
325    
326      #================================================================      #================================================================
327      #  look for possible C compilers      #  look for possible C compilers
328      tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc"      tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc icc"
329      p_CC=      p_CC=
330      for c in $tmp ; do      for c in $tmp ; do
331          rm -f ./genmake_hello.c  ./genmake_hello          rm -f ./genmake_hello.c  ./genmake_hello
# Line 364  EOF Line 364  EOF
364    
365      #================================================================      #================================================================
366      #  look for possible FORTRAN compilers      #  look for possible FORTRAN compilers
367      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95 gfortran"      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc ifort f90 f95 mpif77 mpf77 mpxlf95 gfortran g95"
368      p_FC=      p_FC=
369      for c in $tmp ; do      for c in $tmp ; do
370          rm -f ./hello.f ./hello          rm -f ./hello.f ./hello
# Line 601  Usage: "$0" [OPTIONS] Line 601  Usage: "$0" [OPTIONS]
601    
602      -gsl | --gsl      -gsl | --gsl
603            Use GSL to control floating point rounding and precision            Use GSL to control floating point rounding and precision
604        -devel | --devel
605              Add additional warning and debugging flags for development
606    
607      -mpi | --mpi      -mpi | --mpi
608            Include MPI header files and link to MPI libraries            Include MPI header files and link to MPI libraries
# Line 754  EOF Line 756  EOF
756        print *," HELLO WORLD", wtime        print *," HELLO WORLD", wtime
757        end        end
758  EOF  EOF
759      $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1      COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
760        echo $COMM >> genmake_warnings
761        $COMM >> genmake_warnings 2>&1
762      RET_F=$?      RET_F=$?
763      test -x ./genmake_tc  &&  ./genmake_tc >> genmake_warnings 2>&1      test -x ./genmake_tc  &&  ./genmake_tc >> genmake_warnings 2>&1
764      RETVAL=$?      RETVAL=$?
# Line 983  EOF Line 987  EOF
987          if test "x$RET_COMPILE" = x0 ; then          if test "x$RET_COMPILE" = x0 ; then
988              LIBS="$LIBS -lnetcdf"              LIBS="$LIBS -lnetcdf"
989              HAVE_NETCDF=t              HAVE_NETCDF=t
990            else
991            # try again with "-lnetcdff" added to the libs
992                echo "try again with added '-lnetcdff -lnetcdf'" > genmake_tnc.log
993                echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
994                echo " &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
995                echo " &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
996                cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null  \
997                    &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
998                    &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdff -lnetcdf >> genmake_tnc.log 2>&1
999                RET_COMPILE=$?
1000                cat genmake_tnc.log >> genmake_warnings
1001                if test "x$RET_COMPILE" = x0 ; then
1002                    LIBS="$LIBS -lnetcdff -lnetcdf"
1003                    HAVE_NETCDF=t
1004                fi
1005          fi          fi
1006      fi      fi
1007      rm -f genmake_tnc*      rm -f genmake_tnc*
# Line 1018  OPTFILE= Line 1037  OPTFILE=
1037  INCLUDES="-I. $INCLUDES"  INCLUDES="-I. $INCLUDES"
1038  FFLAGS=  FFLAGS=
1039  FOPTIM=  FOPTIM=
1040    FEXTRAFLAGS=
1041  CFLAGS=  CFLAGS=
1042  KFLAGS1=  KFLAGS1=
1043  KFLAGS2=  KFLAGS2=
# Line 1036  PAPI= Line 1056  PAPI=
1056  PCL=  PCL=
1057  HPMT=  HPMT=
1058  GSL=  GSL=
1059    DEVEL=
1060  HAVE_TEST_L=  HAVE_TEST_L=
1061    
1062  # DEFINES checked by test compilation or command-line  # DEFINES checked by test compilation or command-line
# Line 1094  TAMC_EXTRA= Line 1115  TAMC_EXTRA=
1115    
1116  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
1117  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
1118  gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL MPI JAM DUMPSTATE STANDARDDIRS"  gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL DEVEL MPI JAM DUMPSTATE STANDARDDIRS"
1119    
1120  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
1121  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM FEXTRAFLAGS"
1122  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
1123  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"
1124  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
# Line 1292  for ac_option in "$@" ; do Line 1313  for ac_option in "$@" ; do
1313          -gsl | --gsl)          -gsl | --gsl)
1314              GSL=true ;;              GSL=true ;;
1315    
1316            -devel | --devel)
1317                DEVEL=true ;;
1318    
1319          -mpi | --mpi)          -mpi | --mpi)
1320              MPI=true ;;              MPI=true ;;
1321          -mpi=* | --mpi=*)          -mpi=* | --mpi=*)
# Line 1340  done Line 1364  done
1364  if test -f ./.genmakerc ; then  if test -f ./.genmakerc ; then
1365      echo      echo
1366      echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""      echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
1367      echo "  file.  This file format is no longer supported.  Please see:"      echo "  file.  This file format is no longer supported.  For directions on"
1368      echo      echo "  how to setup and use the new \"genmake2\" script, please see:"
1369      echo "    http://mitgcm.org/devel_HOWTO/"      echo "    http://mitgcm.org/devel_HOWTO/"
1370      echo      echo "  and send an email to MITgcm-support@mitgcm.org if you need help."
1371      echo "  for directions on how to setup and use the new \"genmake2\" input"      echo "WARNING: ignore \"./.genmakerc\" and continue."
     echo "  files and send an email to MITgcm-support@mitgcm.org if you want help."  
1372      echo      echo
1373  fi  fi
1374    
# Line 1542  if test ! "x$TS" = x ; then Line 1565  if test ! "x$TS" = x ; then
1565        else        else
1566              DEFINES="$DEFINES -DTIME_PER_TIMESTEP"              DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1567        fi        fi
1568          PACKAGES="$PACKAGES showflops"
1569  fi  fi
1570  if test ! "x$PAPIS" = x ; then  if test ! "x$PAPIS" = x ; then
1571        echo "  Turning on PAPI flop summary per timestep"        echo "  Turning on PAPI flop summary per timestep"
# Line 1553  if test ! "x$PAPIS" = x ; then Line 1577  if test ! "x$PAPIS" = x ; then
1577        fi        fi
1578        INCLUDES="$INCLUDES $PAPIINC"        INCLUDES="$INCLUDES $PAPIINC"
1579        LIBS="$LIBS $PAPILIB"        LIBS="$LIBS $PAPILIB"
1580          PACKAGES="$PACKAGES showflops"
1581  fi  fi
1582  if test ! "x$PCLS" = x ; then  if test ! "x$PCLS" = x ; then
1583        echo "  Turning on PCL counter summary per timestep"        echo "  Turning on PCL counter summary per timestep"
# Line 1564  if test ! "x$PCLS" = x ; then Line 1589  if test ! "x$PCLS" = x ; then
1589        fi        fi
1590        INCLUDES="$INCLUDES $PCLINC"        INCLUDES="$INCLUDES $PCLINC"
1591        LIBS="$LIBS $PCLLIB"        LIBS="$LIBS $PCLLIB"
1592          PACKAGES="$PACKAGES showflops"
1593  fi  fi
1594  if test ! "x$PAPI" = x ; then  if test ! "x$PAPI" = x ; then
1595        if test ! "x$PAPIS" = x ; then        if test ! "x$PAPIS" = x ; then
# Line 1943  done Line 1969  done
1969  rm -f ./.tmp_pack  rm -f ./.tmp_pack
1970  echo "    packages are:  $PACKAGES"  echo "    packages are:  $PACKAGES"
1971    
1972  #  Check availability of NetCDF and then either build the MNC template  #  Check for package MNC: if NetCDF is available, then build the MNC
1973  #  files or delete mnc from the list of available packages.  #  template files ; otherwise, delete mnc from the list of packages.
1974  echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1  echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1975  RETVAL=$?  RETVAL=$?
1976  if test "x$RETVAL" = x0 ; then  if test "x$RETVAL" = x0 ; then
# Line 1978  EOF Line 2004  EOF
2004      fi      fi
2005  fi  fi
2006    
2007    #  Check for package PROFILES: if NetCDF is not available,
2008    #  then delete profiles from the list of available packages.
2009    echo $PACKAGES | grep ' profiles ' > /dev/null 2>&1
2010    RETVAL=$?
2011    if test "x$RETVAL" = x0 ; then
2012        if test "x$HAVE_NETCDF" != xt ; then
2013            cat <<EOF
2014    
2015    *********************************************************************
2016    WARNING: the "profiles" package was enabled but tests failed to
2017      compile NetCDF applications.  Please check that:
2018    
2019      1) NetCDF is correctly installed for this compiler and
2020      2) the LIBS variable (within the "optfile") specifies the correct
2021           NetCDF library to link against.
2022    
2023      Due to this failure, the "profiles" package is now DISABLED.
2024    *********************************************************************
2025    
2026    EOF
2027            PACKAGES=`echo $PACKAGES | sed -e 's/profiles//g'`
2028            DISABLE="$DISABLE profiles"
2029        fi
2030    fi
2031    
2032  echo "  applying package dependency rules"  echo "  applying package dependency rules"
2033  ck=  ck=
2034  while test "x$ck" != xtt ; do  while test "x$ck" != xtt ; do
2035      i=0      i=0
2036      # rtot=${#PNAME[@]}      # rtot=${#PNAME[@]}
2037      rtot=$nname      rtot=$nname
2038      while test $i -lt $rtot ; do      while test $i -le $rtot ; do
2039    
2040          #  Is $pname in the current $PACKAGES list?          #  Is $pname in the current $PACKAGES list?
2041          #  pname=${PNAME[$i]}          #  pname=${PNAME[$i]}
# Line 2018  while test "x$ck" != xtt ; do Line 2069  while test "x$ck" != xtt ; do
2069    
2070          #  Do we need to add $dname according to the dependency rules?          #  Do we need to add $dname according to the dependency rules?
2071          if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then          if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then
2072                #echo "   " $pname ": need to add :" $dname
2073              in_dis="f"              in_dis="f"
2074              for dis in $DISABLE ; do              for dis in $DISABLE ; do
2075                  if test "x$dis" = "x$dname" ; then                  if test "x$dis" = "x$dname" ; then
# Line 2410  INCLUDES = ${INCLUDES} Line 2462  INCLUDES = ${INCLUDES}
2462  KFLAGS1 = ${KFLAGS1}  KFLAGS1 = ${KFLAGS1}
2463  KFLAGS2 = ${KFLAGS2}  KFLAGS2 = ${KFLAGS2}
2464  # Optim./debug for FC  # Optim./debug for FC
2465  FFLAGS = ${FFLAGS}  FFLAGS = ${FFLAGS} ${FEXTRAFLAGS}
2466  FOPTIM = ${FOPTIM}  FOPTIM = ${FOPTIM}
2467  # Optim./debug for FC  # Optim./debug for FC
2468  F90FLAGS = ${F90FLAGS}  F90FLAGS = ${F90FLAGS}
# Line 2458  lib: libmitgcmuv.a Line 2510  lib: libmitgcmuv.a
2510    
2511  libmitgcmuv.a: \$(OBJFILES)  libmitgcmuv.a: \$(OBJFILES)
2512          ar rcv libmitgcmuv.a \$(OBJFILES)          ar rcv libmitgcmuv.a \$(OBJFILES)
2513            ar d   libmitgcmuv.a main.o
2514    
2515  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
2516    
# Line 2476  Clean: Line 2529  Clean:
2529          @make cleanlinks          @make cleanlinks
2530          -rm -f \$(SPECIAL_FILES)          -rm -f \$(SPECIAL_FILES)
2531          -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak          -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak
2532            -rm -f taf_command taf_output taf_ad.log taf_ad_flow.log
2533  CLEAN:  CLEAN:
2534          @make Clean          @make Clean
2535          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2536          -find \$(EXEDIR) -name "*.data" -exec rm {} \;          -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2537          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2538          -rm -f \$(EXECUTABLE) \$(EXE_AD) *.txt STD* *diagnostics.log datetime          -rm -f \$(EXECUTABLE) \$(EXE_AD) *.txt STD* *diagnostics.log datetime
2539            -rm -f *_MIT_CE_000.opt0000 costfunction*0000
2540          -rm -rf mnc_test_*          -rm -rf mnc_test_*
2541    
2542  #eh3 Makefile: makefile  #eh3 Makefile: makefile
# Line 2540  cat >>$MAKEFILE <<EOF Line 2595  cat >>$MAKEFILE <<EOF
2595          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2596  .$FS.o:  .$FS.o:
2597          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2598  .F90.$FS90:  .F90.o:  
         \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@  
 .$FS90.o:  
2599          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2600  .c.o:  .c.o:
2601          \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<          \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<

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