/[MITgcm]/MITgcm/tools/genmake2
ViewVC logotype

Diff of /MITgcm/tools/genmake2

Parent Directory Parent Directory | Revision Log Revision Log | View Revision Graph Revision Graph | View Patch Patch

revision 1.86 by edhill, Sat Jul 17 02:52:14 2004 UTC revision 1.141 by edhill, Wed Jan 11 06:02:31 2006 UTC
# Line 122  EOF Line 122  EOF
122        stop        stop
123        end        end
124  EOF  EOF
125      test -e Makefile  &&  mv -f Makefile Makefile.bak      test -f $MAKEFILE  &&  mv -f $MAKEFILE $MAKEFILE".tst"
126      cat <<EOF >> Makefile      cat <<EOF >> $MAKEFILE
 %.$tfs : %.F  
127  .SUFFIXES:  .SUFFIXES:
128  genmake_hello.$tfs: genmake_hello.F  .SUFFIXES: .$tfs .F
129          $LN genmake_hello.F genmake_hello.$tfs  .F.$tfs:
130            $LN \$< \$@
131  EOF  EOF
132      $MAKE "genmake_hello."$tfs > /dev/null 2>&1      $MAKE "genmake_hello."$tfs > /dev/null 2>&1
133      RETVAL=$?      RETVAL=$?
134      if test "x$RETVAL" != x0 -o ! -e "genmake_hello."$tfs ; then      if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then
135          if test "x$FS" = x ; then          if test "x$FS" = x ; then
136              FS='for'              FS='for'
137              FS90='fr9'              FS90='fr9'
# Line 148  EOF Line 148  EOF
148              return              return
149          fi          fi
150      fi      fi
151      rm -f genmake_hello.* Makefile      rm -f genmake_hello.* $MAKEFILE
152      test -e Makefile  &&  mv -f Makefile.bak Makefile      test -f $MAKEFILE".tst"  &&  mv -f $MAKEFILE".tst" $MAKEFILE
153    
154      #  If we make it here, use the extensions      #  If we make it here, use the extensions
155      FS=$tfs      FS=$tfs
# Line 181  look_for_makedepend()  { Line 181  look_for_makedepend()  {
181      if test "x${MAKEDEPEND}" = x ; then      if test "x${MAKEDEPEND}" = x ; then
182          which makedepend > /dev/null 2>&1          which makedepend > /dev/null 2>&1
183          RV0=$?          RV0=$?
184            test -f $MAKEFILE  &&  mv -f $MAKEFILE $MAKEFILE".tst"
185            #  echo 'MAKEFILE="'$MAKEFILE'"'
186            cat <<EOF >> $MAKEFILE
187    #   THIS IS A TEST MAKEFILE GENERATED BY "genmake2"
188    #
189    #   Some "makedepend" implementations will die if they cannot
190    #   find a Makefile -- so this file is here to gives them an
191    #   empty one to find and parse.
192    EOF
193          cat <<EOF >> genmake_tc.f          cat <<EOF >> genmake_tc.f
194        program test        program test
195        write(*,*) 'test'        write(*,*) 'test'
# Line 189  look_for_makedepend()  { Line 198  look_for_makedepend()  {
198  EOF  EOF
199          makedepend genmake_tc.f > /dev/null 2>&1          makedepend genmake_tc.f > /dev/null 2>&1
200          RV1=$?          RV1=$?
201            test -f $MAKEFILE  &&  rm -f $MAKEFILE
202            test -f $MAKEFILE".tst"  &&  mv -f $MAKEFILE".tst" $MAKEFILE
203          if test "x${RV0}${RV1}" = x00 ; then          if test "x${RV0}${RV1}" = x00 ; then
204              MAKEDEPEND=makedepend              MAKEDEPEND=makedepend
205          else          else
206              echo "    a system-default makedepend was not found."              echo "    a system-default makedepend was not found."
207                            
208              #  Try to build the cyrus implementation              #  Try to build the cyrus implementation
209              rm -f ./genmake_cy_md              build_cyrus_makedepend
             (  
                 cd $ROOTDIR/tools/cyrus-imapd-makedepend  \  
                     &&  ./configure > /dev/null 2>&1  \  
                     &&  make > /dev/null 2>&1  
                 if test -x ./makedepend.exe ; then  
                     $LN ./makedepend.exe ./makedepend  
                 fi  
                 ./makedepend ifparser.c > /dev/null 2>&1  \  
                     &&  echo "true"  
             ) > ./genmake_cy_md  
             grep true ./genmake_cy_md > /dev/null 2>&1  
210              RETVAL=$?              RETVAL=$?
211              if test "x$RETVAL" = x0 ; then              if test "x$RETVAL" != x0 ; then
                 MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'  
             else  
212                  MAKEDEPEND='$(TOOLSDIR)/xmakedepend'                  MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
213              fi              fi
214              rm -f ./genmake_cy_md              rm -f ./genmake_cy_md
215          fi          fi
216        else
217            #  echo "MAKEDEPEND=${MAKEDEPEND}"
218            echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1
219            RETVAL=$?
220            if test x"$RETVAL" = x0 ; then
221                build_cyrus_makedepend
222            fi
223        fi
224    }
225    
226    
227    build_cyrus_makedepend()  {
228        rm -f ./genmake_cy_md
229        (
230            cd $ROOTDIR/tools/cyrus-imapd-makedepend  \
231                &&  ./configure > /dev/null 2>&1  \
232                &&  make > /dev/null 2>&1
233            if test -x ./makedepend.exe ; then
234                $LN ./makedepend.exe ./makedepend
235            fi
236            ./makedepend ifparser.c > /dev/null 2>&1  \
237                &&  echo "true"
238        ) > ./genmake_cy_md
239        grep true ./genmake_cy_md > /dev/null 2>&1
240        RETVAL=$?
241        rm -f ./genmake_cy_md
242        if test "x$RETVAL" = x0 ; then
243            MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
244            return 0
245        else
246            echo "WARNING: unable to build cyrus-imapd-makedepend"
247            return 1
248      fi      fi
249  }  }
250    
251    
252    build_embed_encode()
253    {
254        printf "  building the embed-encode utility...  "
255        if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then
256            if test ! -d "$ROOTDIR/tools/embed_encode" ; then
257                echo
258                echo "    Error: can't locate \"$ROOTDIR/tools/embed_encode\""
259                echo
260                EMBED_SRC=f
261                return 1
262            fi
263            clist="cc gcc c89 $CC"
264            for ic in $clist ; do
265                comm="$ic -o encode_files encode_files.c"
266                ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1
267                RETVAL=$?
268                if test "x$RETVAL" = x0 ; then
269                    echo "OK"
270                    DEFINES="$DEFINES -DHAVE_EMBED_SRC"
271                    return 0
272                fi
273            done
274            echo
275            echo "    Error: unable to build $ROOTDIR/embed_encode/encode_files"
276            echo "      so it has been disabled"
277            echo
278            EMBED_SRC=f
279            return 1
280        fi
281        echo "OK"
282        DEFINES="$DEFINES -DHAVE_EMBED_SRC"
283    }
284    
285    
286  # Guess possible config options for this host  # Guess possible config options for this host
287  find_possible_configs()  {  find_possible_configs()  {
288    
# Line 251  find_possible_configs()  { Line 315  find_possible_configs()  {
315    
316      look_for_makedepend      look_for_makedepend
317    
318      # look for possible fortran compilers      #================================================================
319      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95"      #  look for possible C compilers
320        tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc"
321        p_CC=
322        for c in $tmp ; do
323            rm -f ./genmake_hello.c  ./genmake_hello
324            cat >> genmake_hello.c << EOF
325    #include <stdio.h>
326    int main(int argc, char **argv) {
327      printf("Hello!\n");
328      return 0;
329    }
330    EOF
331            $c -o genmake_hello genmake_hello.c > /dev/null 2>&1
332            RETVAL=$?
333            if test "x${RETVAL}" = x0 ; then
334                p_CC="$p_CC $c"
335            fi
336        done
337        rm -f ./genmake_hello.c ./genmake_hello
338        if test "x${p_CC}" = x ; then
339            cat 1>&2 <<EOF
340    
341    Error: No C compilers were found in your path.  Please specify one using:
342    
343        1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
344        2) the CC or MITGCM_CC environment variables.
345    
346    EOF
347            exit 1
348        else
349            echo "  The possible C compilers found in your path are:"
350            echo "   "$p_CC
351            if test "x$CC" = x ; then
352                CC=`echo $p_CC | $AWK '{print $1}'`
353                echo "  Setting C compiler to: "$CC
354            fi
355        fi
356    
357        #================================================================
358        #  look for possible FORTRAN compilers
359        tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95 gfortran"
360      p_FC=      p_FC=
361      for c in $tmp ; do      for c in $tmp ; do
362          rm -f ./hello.f ./hello          rm -f ./hello.f ./hello
# Line 277  Error: No Fortran compilers were found i Line 381  Error: No Fortran compilers were found i
381    
382      1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),      1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
383      2) a command-line option (eg. "-fc NAME"), or      2) a command-line option (eg. "-fc NAME"), or
384      3) the MITGCM_FC environment variable.      3) the FC or MITGCM_FC environment variables.
385    
386  EOF  EOF
387          exit 1          exit 1
388      else      else
389          echo "  The possible FORTRAN compilers found in your path are:"          echo "  The possible FORTRAN compilers found in your path are:"
390          echo "   "$p_FC          echo "   "$p_FC
391          if test "x$FC" = x ; then      fi
392              FC=`echo $p_FC | $AWK '{print $1}'`  
393              echo "  Setting FORTRAN compiler to: "$FC      #  Use the first of the compilers found in the current PATH
394          fi      #  that has a correctly-named optfile
395        if test "x$OPTFILE" = x  -a  "x$FC" = x ; then
396            for i in $p_FC ; do
397                OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
398                if test -r $OPTFILE ; then
399                    echo "  Setting OPTFILE to: "$OPTFILE
400                    break
401                fi
402            done
403      fi      fi
404    
405      if test "x$OPTFILE" = x ; then      if test "x$OPTFILE" = x ; then
# Line 448  Usage: "$0" [OPTIONS] Line 560  Usage: "$0" [OPTIONS]
560            will search for a working compiler by trying a list of            will search for a working compiler by trying a list of
561            "usual suspects" such as g77, f77, etc.            "usual suspects" such as g77, f77, etc.
562    
563        -cc NAME | --cc NAME | -cc=NAME | --cc=NAME
564              Use "NAME" as the C compiler.  By default, genmake
565              will search for a working compiler by trying a list of
566              "usual suspects" such as gcc, c89, cc, etc.
567    
568      -[no]ieee | --[no]ieee      -[no]ieee | --[no]ieee
569            Do or don't use IEEE numerics.  Note that this option            Do or don't use IEEE numerics.  Note that this option
570            *only* works if it is supported by the OPTFILE that            *only* works if it is supported by the OPTFILE that
571            is being used.            is being used.
572    
573        -ts | --ts
574              Produce timing information per timestep
575        -papis | --papis
576              Produce summary MFlop/s with PAPI per timestep
577        -foolad | --foolad
578              Fool the AD code generator
579        -papi | --papi
580              Performance analysis with PAPI
581        -hpmt | --hpmt
582              Performance analysis with the HPM Toolkit
583    
584        -gsl | --gsl
585              Use GSL to control floating point rounding and precision
586    
587      -mpi | --mpi      -mpi | --mpi
588            Include MPI header files and link to MPI libraries            Include MPI header files and link to MPI libraries
589      -mpi=PATH | --mpi=PATH      -mpi=PATH | --mpi=PATH
590            Include MPI header files and link to MPI libraries using MPI_ROOT            Include MPI header files and link to MPI libraries using MPI_ROOT
591            set to PATH. i.e. Include files from $PATH/include, link to libraries            set to PATH. i.e. Include files from \$PATH/include, link to libraries
592            from $PATH/lib and use binaries from $PATH/bin.            from \$PATH/lib and use binaries from \$PATH/bin.
593    
594        -es | --es | -embed-source | --embed-source
595              Embed a tarball containing the full source code
596              (including the Makefile, etc.) used to build the
597              executable [off by default]
598    
599      -bash NAME      -bash NAME
600            Explicitly specify the Bourne or BASH shell to use            Explicitly specify the Bourne or BASH shell to use
# Line 483  EOF Line 619  EOF
619    
620  #  Build a CPP macro to automate calling C routines from FORTRAN  #  Build a CPP macro to automate calling C routines from FORTRAN
621  get_fortran_c_namemangling()  {  get_fortran_c_namemangling()  {
622    
623        #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\""
624        if test ! "x$FC_NAMEMANGLE" = x ; then
625            return 0
626        fi
627    
628      default_nm="#define FC_NAMEMANGLE(X) X ## _"      default_nm="#define FC_NAMEMANGLE(X) X ## _"
629            
630      cat > genmake_test.c <<EOF      cat > genmake_test.c <<EOF
# Line 500  WARNING: Please contact <MITgcm-support@ Line 642  WARNING: Please contact <MITgcm-support@
642  EOF  EOF
643          return 1          return 1
644      fi      fi
645      c_tcall=`nm genmake_test.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`      c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
646      RETVAL=$?      RETVAL=$?
647      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
648          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
# Line 512  WARNING: Please contact <MITgcm-support@ Line 654  WARNING: Please contact <MITgcm-support@
654  EOF  EOF
655          return 1          return 1
656      fi      fi
657      cat > genmake_tcomp.f <<EOF      cat > genmake_tcomp.$FS <<EOF
658        subroutine tcall( string )        subroutine tcall( string )
659        character*(*) string        character*(*) string
660        call tsub( string )        call tsub( string )
661        end        end
662  EOF  EOF
663      $FC $FFLAGS $DEFINES -c genmake_tcomp.f >> genmake_warnings 2>&1      $FC $FFLAGS -c genmake_tcomp.$FS >> genmake_warnings 2>&1
664      RETVAL=$?      RETVAL=$?
665      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
666          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
# Line 530  WARNING: Please contact <MITgcm-support@ Line 672  WARNING: Please contact <MITgcm-support@
672  EOF  EOF
673          return 1          return 1
674      fi      fi
675      f_tcall=`nm genmake_tcomp.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`      f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
676      RETVAL=$?      RETVAL=$?
677      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
678          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
# Line 584  void FC_NAMEMANGLE(cloc) ( double *curti Line 726  void FC_NAMEMANGLE(cloc) ( double *curti
726   *curtim = *curtim/1.E6;   *curtim = *curtim/1.E6;
727  }  }
728  EOF  EOF
729      make genmake_tc_1.o >> genmake_tc.log 2>&1      make genmake_tc_1.o >> genmake_warnings 2>&1
730      RET_C=$?      RET_C=$?
731      cat <<EOF > genmake_tc_2.f      cat <<EOF > genmake_tc_2.$FS
732        program hello        program hello
733        Real*8 wtime        REAL*8 wtime
734        external cloc        external cloc
735        call cloc(wtime)        call cloc(wtime)
736        print *," HELLO WORLD", wtime        print *," HELLO WORLD", wtime
737        end program hello        end
738  EOF  EOF
739      $FC $FFLAGS -o genmake_tc genmake_tc_2.f genmake_tc_1.o >> genmake_tc.log 2>&1      $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1
740      RET_F=$?      RET_F=$?
741      test -x ./genmake_tc  &&  ./genmake_tc >> genmake_tc.log 2>&1      test -x ./genmake_tc  &&  ./genmake_tc >> genmake_warnings 2>&1
742      RETVAL=$?      RETVAL=$?
743      if test "x$RETVAL" = x0 ; then      if test "x$RETVAL" = x0 ; then
744          HAVE_CLOC=t          HAVE_CLOC=t
# Line 606  EOF Line 748  EOF
748  }  }
749    
750    
751    check_HAVE_SIGREG()  {
752        get_fortran_c_namemangling
753        cat <<EOF > genmake_tc_1.c
754    $FC_NAMEMANGLE
755    #include <stdlib.h>
756    #include <stdio.h>
757    #include <signal.h>
758    #include <errno.h>
759    #include <ucontext.h>
760    
761    int * ip;
762    
763    static void killhandler(
764        unsigned int sn, siginfo_t  si, struct ucontext *sc )
765    {
766        *ip = *ip + 1;
767        return;
768    }
769    
770    void FC_NAMEMANGLE(sigreg) (int * aip)
771    {
772        struct sigaction s;
773        ip = aip;
774        s.sa_flags = SA_SIGINFO;
775        s.sa_sigaction = (void *)killhandler;
776        if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) {
777            printf("Sigaction returned error = %d\n", errno);
778            exit(0);
779        }
780        return;
781    }
782    EOF
783        make genmake_tc_1.o >> genmake_warnings 2>&1
784        RET_C=$?
785        cat <<EOF > genmake_tc_2.$FS
786          program hello
787          integer anint
788          common /iv/ anint
789          external sigreg
790          call sigreg(anint)
791          end
792    EOF
793        echo >> genmake_warnings
794        echo "running: check_HAVE_SIGREG()" >> genmake_warnings
795        cat genmake_tc_2.$FS >> genmake_warnings
796        COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
797        echo $COMM >> genmake_warnings
798        $COMM >> genmake_warnings 2>&1
799        RETVAL=$?
800        if test "x$RETVAL" = x0 ; then
801            HAVE_SIGREG=t
802            DEFINES="$DEFINES -DHAVE_SIGREG"
803        fi
804        rm -f genmake_tc*
805    }
806    
807    
808    check_HAVE_SETRLSTK()  {
809        get_fortran_c_namemangling
810        cat <<EOF > genmake_tc_1.c
811    $FC_NAMEMANGLE
812    #include <sys/time.h>
813    #include <sys/resource.h>
814    #include <unistd.h>
815    void FC_NAMEMANGLE(setrlstk) ()
816    {
817        struct rlimit rls;
818        rls.rlim_cur = RLIM_INFINITY;
819        rls.rlim_max = RLIM_INFINITY;
820        setrlimit(RLIMIT_STACK, &rls);
821        return;
822    }
823    EOF
824        make genmake_tc_1.o >> genmake_warnings 2>&1
825        RET_C=$?
826        cat <<EOF > genmake_tc_2.$FS
827          program hello
828          external setrlstk
829          call setrlstk()
830          end
831    EOF
832        echo >> genmake_warnings
833        echo "running: check_HAVE_SETRLSTK()" >> genmake_warnings
834        cat genmake_tc_2.$FS >> genmake_warnings
835        COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
836        echo $COMM >> genmake_warnings
837        $COMM >> genmake_warnings 2>&1
838        RETVAL=$?
839        if test "x$RETVAL" = x0 ; then
840            HAVE_SETRLSTK=t
841            DEFINES="$DEFINES -DHAVE_SETRLSTK"
842        fi
843        rm -f genmake_tc*
844    }
845    
846    
847    check_HAVE_STAT()  {
848        get_fortran_c_namemangling
849        cat <<EOF > genmake_tc_1.c
850    $FC_NAMEMANGLE
851    #include <stdio.h>
852    #include <stdlib.h>
853    #include <unistd.h>
854    #include <sys/stat.h>
855    #include <sys/types.h>
856    void FC_NAMEMANGLE(tfsize) ( int *nbyte )
857    {
858        char name[512];
859        struct stat astat;
860    
861        name[0] = 'a'; name[1] = '\0';
862        if (! stat(name, &astat))
863            *nbyte = (int)(astat.st_size);
864        else
865            *nbyte = -1;
866    }
867    EOF
868        make genmake_tc_1.o >> genmake_tc.log 2>&1
869        RET_C=$?
870        cat <<EOF > genmake_tc_2.$FS
871          program hello
872          integer nbyte
873          call tfsize(nbyte)
874          print *," HELLO WORLD", nbyte
875          end
876    EOF
877        echo >> genmake_warnings
878        echo "running: check_HAVE_STAT()" >> genmake_warnings
879        cat genmake_tc_2.$FS >> genmake_warnings
880        COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
881        echo $COMM >> genmake_warnings
882        $COMM >> genmake_tc.log 2>&1
883        RETVAL=$?
884        if test "x$RETVAL" = x0 ; then
885            HAVE_STAT=t
886            DEFINES="$DEFINES -DHAVE_STAT"
887        fi
888        rm -f genmake_tc*
889    }
890    
891    
892  check_netcdf_libs()  {  check_netcdf_libs()  {
893      cat <<EOF > genmake_tnc.for      if test ! "x$SKIP_NETCDF_CHECK" = x ; then
894            return
895        fi
896        echo >> genmake_warnings
897        echo "running: check_netcdf_libs()" >> genmake_warnings
898        cat <<EOF > genmake_tnc.F
899        program fgennc        program fgennc
900  #include "netcdf.inc"  #include "netcdf.inc"
901    EOF
902        if test ! "x$MPI" = x ; then
903            echo '#include "mpif.h"' >> genmake_tnc.F
904        fi
905        cat <<EOF >> genmake_tnc.F
906        integer iret, ncid, xid        integer iret, ncid, xid
907        iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)        iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
908        IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)        IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
# Line 619  check_netcdf_libs()  { Line 912  check_netcdf_libs()  {
912        IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)        IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
913        end        end
914  EOF  EOF
915      $CPP genmake_tnc.for > genmake_tnc.f  \      echo "===  genmake_tnc.F  ===" > genmake_tnc.log
916          &&  $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f $LIBS >> genmake_tnc.log 2>&1      cat genmake_tnc.F >> genmake_tnc.log
917        echo "===  genmake_tnc.F  ===" >> genmake_tnc.log
918        RET_CPP=f
919        COMM="$CPP $DEFINES $INCLUDES genmake_tnc.F"
920        echo "$COMM" >> genmake_tnc.log
921        $COMM > genmake_tnc.$FS 2>/dev/null  &&  RET_CPP=t
922        if test "x$RET_CPP" = xf ; then
923            echo "  WARNING: CPP failed to pre-process the netcdf test." \
924                >> genmake_tnc.log
925            echo "    Please check that \$INCLUDES is properly set." \
926                >> genmake_tnc.log
927        fi
928        echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS  \ " >> genmake_tnc.log
929        echo "  &&  $LINK -o genmake_tnc.o $LIBS" >> genmake_tnc.log
930        $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
931            &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
932      RET_COMPILE=$?      RET_COMPILE=$?
933      test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1      cat genmake_tnc.log >> genmake_warnings
934      RETVAL=$?  
935      if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then      #EH3  Remove test program execution for machines that either disallow
936        #EH3  execution or cannot support it (eg. cross-compilers)
937        #EH3
938        #EH3 test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1
939        #EH3 RETVAL=$?
940        #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
941    
942        if test "x$RET_COMPILE" = x0 ; then
943          HAVE_NETCDF=t          HAVE_NETCDF=t
944      else      else
945          # try again with "-lnetcdf" added to the libs          # try again with "-lnetcdf" added to the libs
946          $CPP genmake_tnc.for > genmake_tnc.f  \          echo "try again with added '-lnetcdf'" > genmake_tnc.log
947              &&  $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f \          echo "$CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS \ " >> genmake_tnc.log
948              $LIBS -lnetcdf >> genmake_tnc_2.log 2>&1          echo " &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
949            echo " &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
950            $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null  \
951                &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
952                &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
953          RET_COMPILE=$?          RET_COMPILE=$?
954          test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1          cat genmake_tnc.log >> genmake_warnings
955          RETVAL=$?          if test "x$RET_COMPILE" = x0 ; then
         if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then  
956              LIBS="$LIBS -lnetcdf"              LIBS="$LIBS -lnetcdf"
957              HAVE_NETCDF=t              HAVE_NETCDF=t
         else  
             cat genmake_tnc.log >> genmake_warnings  
958          fi          fi
959      fi      fi
960      rm -f genmake_tnc*      rm -f genmake_tnc*
# Line 657  PLATFORM= Line 973  PLATFORM=
973  LN=  LN=
974  S64=  S64=
975  KPP=  KPP=
976  FC=  #FC=
977  CPP=  #CC=gcc
978    #CPP=
979  LINK=  LINK=
980  DEFINES=  DEFINES=
981  PACKAGES=  PACKAGES=
982  ENABLE=  ENABLE=
983  DISABLE=  DISABLE=
984  MAKEFILE=  # MAKEFILE=
985  MAKEDEPEND=  # MAKEDEPEND=
986  PDEPEND=  PDEPEND=
987  DUMPSTATE=t  DUMPSTATE=t
988  PDEFAULT=  PDEFAULT=
989  OPTFILE=  OPTFILE=
990  INCLUDES="-I."  INCLUDES="-I. $INCLUDES"
991  FFLAGS=  FFLAGS=
992  FOPTIM=  FOPTIM=
993  CFLAGS=  CFLAGS=
# Line 683  NOOPTFILES= Line 1000  NOOPTFILES=
1000  NOOPTFLAGS=  NOOPTFLAGS=
1001  MPI=  MPI=
1002  MPIPATH=  MPIPATH=
1003    TS=
1004    PAPIS=
1005    FOOLAD=
1006    PAPI=
1007    HPMT=
1008    GSL=
1009    HAVE_TEST_L=
1010    
1011  # DEFINES checked by test compilation  # DEFINES checked by test compilation or command-line
1012  HAVE_SYSTEM=  HAVE_SYSTEM=
1013  HAVE_FDATE=  HAVE_FDATE=
1014  FC_NAMEMANGLE=  FC_NAMEMANGLE=
1015  HAVE_CLOC=  HAVE_CLOC=
1016    HAVE_SETRLSTK=
1017    HAVE_STAT=
1018  HAVE_NETCDF=  HAVE_NETCDF=
1019  HAVE_ETIME=  HAVE_ETIME=
1020    IGNORE_TIME=
1021    
1022  MODS=  MODS=
1023  TOOLSDIR=  TOOLSDIR=
# Line 701  STANDARDDIRS="USE_THE_DEFAULT" Line 1028  STANDARDDIRS="USE_THE_DEFAULT"
1028  G2ARGS=  G2ARGS=
1029  BASH=  BASH=
1030  PWD=`pwd`  PWD=`pwd`
1031  MAKE=make  test "x$MAKE" = x  &&  MAKE=make
1032  AWK=awk  test "x$AWK" = x   &&  AWK=awk
1033  THISHOSTNAME=`hostname`  EMBED_SRC=
1034    THISHOST=`hostname`
1035  THISCWD=`pwd`  THISCWD=`pwd`
1036  THISDATE=`date`  THISDATE=`date`
1037    THISUSER=`echo $USER`
1038    THISVER=
1039  MACHINE=`uname -a`  MACHINE=`uname -a`
1040  EXECUTABLE=  EXECUTABLE=
1041  EXEHOOK=  EXEHOOK=
# Line 734  TAMC_EXTRA= Line 1064  TAMC_EXTRA=
1064    
1065  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
1066  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
1067  gm_s2="FC CPP IEEE MPI JAM DUMPSTATE STANDARDDIRS"  gm_s2="FC CPP IEEE TS PAPIS PAPI HPMT GSL MPI JAM DUMPSTATE STANDARDDIRS"
1068    
1069  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
1070  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
1071  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
1072  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOSTNAME THISDATE MACHINE"  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"
1073  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
1074  gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"  gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"
1075    
# Line 771  for i in . $MODS ; do Line 1101  for i in . $MODS ; do
1101      fi      fi
1102  done  done
1103  printf "  getting local config information:  "  printf "  getting local config information:  "
1104  if test -e $gm_local ; then  if test -f $gm_local ; then
1105      echo "using $gm_local"      echo "using $gm_local"
1106      . $gm_local      . $gm_local
1107      # echo "DISABLE=$DISABLE"      # echo "DISABLE=$DISABLE"
# Line 780  else Line 1110  else
1110      echo "none found"      echo "none found"
1111  fi  fi
1112    
1113  #  echo "$0::$1:$2:$3:$4:$5:$6:$7:"  #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
1114  #OPTIONS=  #OPTIONS=
1115  #n=0  #n=0
1116  #for i ; do  #for i ; do
# Line 792  fi Line 1122  fi
1122  #done  #done
1123  #parse_options  #parse_options
1124  ac_prev=  ac_prev=
1125  for ac_option ; do  for ac_option in "$@" ; do
1126    
1127      G2ARGS="$G2ARGS \"$ac_option\""      G2ARGS="$G2ARGS \"$ac_option\""
1128    
# Line 888  for ac_option ; do Line 1218  for ac_option ; do
1218  #               ac_prev=cpp ;;  #               ac_prev=cpp ;;
1219  #           -cpp=* | --cpp=*)  #           -cpp=* | --cpp=*)
1220  #               CPP=$ac_optarg ;;  #               CPP=$ac_optarg ;;
1221                        
1222            -cc | --cc)
1223                ac_prev=CC ;;
1224            -cc=* | --cc=*)
1225                CC=$ac_optarg ;;
1226            
1227          -fortran | --fortran | -fc | --fc)          -fortran | --fortran | -fc | --fc)
1228              ac_prev=FC ;;              ac_prev=FC ;;
1229          -fc=* | --fc=*)          -fc=* | --fc=*)
# Line 909  for ac_option ; do Line 1244  for ac_option ; do
1244          -noieee | --noieee)          -noieee | --noieee)
1245              IEEE= ;;              IEEE= ;;
1246    
1247            -ts | --ts)
1248                TS=true ;;
1249            -papis | --papis)
1250                PAPIS=true ;;
1251            -foolad | --foolad)
1252                FOOLAD=true ;;
1253            -papi | --papi)
1254                PAPI=true ;;
1255            -hpmt | --hpmt)
1256                HPMT=true ;;
1257    
1258            -gsl | --gsl)
1259                GSL=true ;;
1260    
1261          -mpi | --mpi)          -mpi | --mpi)
1262              MPI=true ;;              MPI=true ;;
1263          -mpi=* | --mpi=*)          -mpi=* | --mpi=*)
# Line 932  for ac_option ; do Line 1281  for ac_option ; do
1281              ac_prev=TAMC_EXTRA ;;              ac_prev=TAMC_EXTRA ;;
1282          -tamc_extra=* | --tamc_extra=*)          -tamc_extra=* | --tamc_extra=*)
1283              TAMC_EXTRA=$ac_optarg ;;              TAMC_EXTRA=$ac_optarg ;;
1284            
1285            -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1286                IGNORE_TIME="-DIGNORE_TIME" ;;
1287    
1288            -es | --es | -embed-source | --embed-source)
1289                EMBED_SRC=t ;;
1290    
1291          -*)          -*)
1292              echo "Error: unrecognized option: "$ac_option              echo "Error: unrecognized option: "$ac_option
# Line 947  for ac_option ; do Line 1302  for ac_option ; do
1302            
1303  done  done
1304    
1305    
1306  if test -f ./.genmakerc ; then  if test -f ./.genmakerc ; then
1307      echo      echo
1308      echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""      echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
# Line 959  if test -f ./.genmakerc ; then Line 1315  if test -f ./.genmakerc ; then
1315      echo      echo
1316  fi  fi
1317    
1318    #  Find the MITgcm ${ROOTDIR}
1319  if test "x${ROOTDIR}" = x ; then  if test "x${ROOTDIR}" = x ; then
1320      if test "${PWD##/*/}" = "bin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then      tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1321        if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then
1322          ROOTDIR=".."          ROOTDIR=".."
1323      else      else
1324          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
# Line 984  if test ! -d ${ROOTDIR} ; then Line 1342  if test ! -d ${ROOTDIR} ; then
1342      exit 1      exit 1
1343  fi  fi
1344    
1345    #  Find the MITgcm ${THISVER}
1346    if test -f "${ROOTDIR}/doc/tag-index" ; then
1347        THISVER=`grep '^checkpoint' ${ROOTDIR}/doc/tag-index | head -1`
1348    fi
1349    
1350    if test "x$MAKEFILE" = x ; then
1351        MAKEFILE="Makefile"
1352    fi
1353    
1354  echo "  getting OPTFILE information:  "  echo "  getting OPTFILE information:  "
1355  if test "x${OPTFILE}" = x ; then  if test "x${OPTFILE}" = x ; then
1356      if test "x$MITGCM_OF" = x ; then      if test "x$MITGCM_OF" = x ; then
# Line 1013  if test "x$OPTFILE" != xNONE ; then Line 1380  if test "x$OPTFILE" != xNONE ; then
1380      fi      fi
1381  fi  fi
1382    
 #  Check for broken systems that cannot correctly distinguish *.F and *.f files  
 # check_for_broken_Ff  
   
1383  echo "  getting AD_OPTFILE information:  "  echo "  getting AD_OPTFILE information:  "
1384  if test "x${AD_OPTFILE}" = x ; then  if test "x${AD_OPTFILE}" = x ; then
1385      if test "x$MITGCM_AD_OF" = x ; then      if test "x$MITGCM_AD_OF" = x ; then
# Line 1043  if test "x${AD_OPTFILE}" != xNONE ; then Line 1407  if test "x${AD_OPTFILE}" != xNONE ; then
1407      fi      fi
1408  fi  fi
1409    
1410  #  Check that FC, LINK, CPP, S64, LN, and MAKE are defined.  If not,  #====================================================================
1411    #  Set default values if not set by the optfile
1412    #
1413    #  Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined.  If not,
1414  #  either set defaults or complain and abort!  #  either set defaults or complain and abort!
1415  if test ! "x$BASH" = x ; then  if test ! "x$BASH" = x ; then
1416      # add a trailing space so that it works within the Makefile syntax (see below)      # add a trailing space so that it works within the Makefile syntax (see below)
# Line 1059  Error: no Fortran compiler: please speci Line 1426  Error: no Fortran compiler: please speci
1426  EOF  EOF
1427      exit 1      exit 1
1428  fi  fi
1429    if test "x$CC" = x ; then
1430        CC=cc
1431    #     cat <<EOF 1>&2
1432    # Error: no C compiler: please specify using one of the following:
1433    #   1) within the options file ("CC=...") as specified by "-of=OPTFILE"
1434    #   2) the "-cc=XXX" command-line option
1435    #   3) the "./genmake_local" file
1436    # EOF
1437    #     exit 1
1438    fi
1439  if test "x$LINK" = x ; then  if test "x$LINK" = x ; then
1440      LINK=$FC      LINK=$FC
1441  fi  fi
# Line 1109  Error: The command "ln -s" failed -- ple Line 1486  Error: The command "ln -s" failed -- ple
1486  EOF  EOF
1487      exit 1      exit 1
1488  fi  fi
1489    test -L genmake_tlink > /dev/null 2>&1
1490    RETVAL=$?
1491    if test "x$RETVAL" = x0 ; then
1492        HAVE_TEST_L=t
1493    fi
1494  rm -f genmake_test_ln genmake_tlink  rm -f genmake_test_ln genmake_tlink
1495    
1496  #  Check for broken *.F/*.f handling and fix if possible  #  Check for broken *.F/*.f handling and fix if possible
# Line 1119  if test ! "x$MPI" = x ; then Line 1501  if test ! "x$MPI" = x ; then
1501        DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"        DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1502  fi  fi
1503    
1504    if test ! "x$TS" = x ; then
1505          echo "  Turning on timing per timestep"
1506          if test ! "x$FOOLAD" = x ; then
1507                DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP"
1508          else
1509                DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1510          fi
1511    fi
1512    if test ! "x$PAPIS" = x ; then
1513          echo "  Turning on PAPI flop summary per timestep"
1514          echo "  Please make sure PAPIINC, PAPILIB are defined"
1515          if test ! "x$FOOLAD" = x ; then
1516                DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP"
1517          else
1518                DEFINES="$DEFINES -DUSE_PAPI_FLOPS"
1519          fi
1520          INCLUDES="$INCLUDES $PAPIINC"
1521          LIBS="$LIBS $PAPILIB"
1522    fi
1523    if test ! "x$PAPI" = x ; then
1524          if test ! "x$PAPIS" = x ; then
1525              echo "  PAPI performance analysis and flop summary per timestep cannot co-exist!"
1526              echo "  Sticking with PAPI flop summary per timestep!"
1527          else
1528              echo "  Turning on performance analysis with PAPI"
1529              echo "  Please make sure PAPIINC, PAPILIB are defined"
1530              DEFINES="$DEFINES -DUSE_PAPI"
1531              INCLUDES="$INCLUDES $PAPIINC"
1532              LIBS="$LIBS $PAPILIB"
1533          fi
1534    fi
1535    if test ! "x$HPMT" = x ; then
1536          if test ! "x$PAPI" = x ; then
1537              echo "  PAPI and the HPM Toolkit cannot co-exist!"
1538              echo "  Sticking with PAPI!"
1539          else
1540              echo "  Turning on performance analysis with the HPM Toolkit"
1541              echo "  Please make sure HPMTINC, HPMTLIB are defined"
1542              DEFINES="$DEFINES -DUSE_LIBHPM"
1543              INCLUDES="$INCLUDES $HPMTINC"
1544              LIBS="$LIBS $HPMTLIB"
1545          fi
1546    fi
1547    if test ! "x$GSL" = x ; then
1548          echo "  Turning on use of GSL to control floating point calculations"
1549          echo "  Please make sure GSLINC, GSLLIB are defined"
1550          DEFINES="$DEFINES -DUSE_GSL_IEEE"
1551          INCLUDES="$INCLUDES $GSLINC"
1552          LIBS="$LIBS $GSLLIB"
1553    fi
1554    
1555  printf "\n===  Checking system libraries  ===\n"  printf "\n===  Checking system libraries  ===\n"
1556  printf "  Do we have the system() command using $FC...  "  printf "  Do we have the system() command using $FC...  "
1557  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.$FS <<EOF
1558        program hello        program hello
1559        call system('echo hi')        call system('echo hi')
1560        end        end
1561  EOF  EOF
1562  $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1  $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1563  RETVAL=$?  RETVAL=$?
1564  if test "x$RETVAL" = x0 ; then  if test "x$RETVAL" = x0 ; then
1565      HAVE_SYSTEM=t      HAVE_SYSTEM=t
# Line 1139  fi Line 1572  fi
1572  rm -f genmake_tcomp*  rm -f genmake_tcomp*
1573    
1574  printf "  Do we have the fdate() command using $FC...  "  printf "  Do we have the fdate() command using $FC...  "
1575  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.$FS <<EOF
1576        program hello        program hello
1577        CHARACTER(128) string        CHARACTER*(128) string
1578        string = ' '        string = ' '
1579        call fdate( string )        call fdate( string )
1580        print *, string        print *, string
1581        end        end
1582  EOF  EOF
1583  $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1  $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1584  RETVAL=$?  RETVAL=$?
1585  if test "x$RETVAL" = x0 ; then  if test "x$RETVAL" = x0 ; then
1586      HAVE_FDATE=t      HAVE_FDATE=t
# Line 1160  fi Line 1593  fi
1593  rm -f genmake_tcomp*  rm -f genmake_tcomp*
1594    
1595  printf "  Do we have the etime() command using $FC...  "  printf "  Do we have the etime() command using $FC...  "
1596  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.$FS <<EOF
1597        program hello        program hello
1598        REAL*4 ACTUAL, TARRAY(2)        REAL*4 ACTUAL, TARRAY(2)
1599        EXTERNAL ETIME        EXTERNAL ETIME
# Line 1169  cat > genmake_tcomp.f <<EOF Line 1602  cat > genmake_tcomp.f <<EOF
1602        print *, tarray        print *, tarray
1603        end        end
1604  EOF  EOF
1605  $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1  $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1606  RETVAL=$?  RETVAL=$?
1607  if test "x$RETVAL" = x0 ; then  if test "x$RETVAL" = x0 ; then
1608      HAVE_ETIME=t      HAVE_ETIME=t
# Line 1187  if test "x$HAVE_CLOC" != x ; then Line 1620  if test "x$HAVE_CLOC" != x ; then
1620      echo "yes"      echo "yes"
1621  else  else
1622      echo "no"      echo "no"
1623        if test "x$EMBED_SRC" = xt ; then
1624            echo "    WARNING: you requested file embedding but it has"
1625            echo "      been disabled since C code cannot be called"
1626            EMBED_SRC=
1627        fi
1628    fi
1629    rm -f genmake_t*
1630    
1631    printf "  Can we unlimit the stack size using $FC...  "
1632    check_HAVE_SETRLSTK
1633    if test "x$HAVE_SETRLSTK" != x ; then
1634        echo "yes"
1635    else
1636        echo "no"
1637    fi
1638    rm -f genmake_t*
1639    
1640    printf "  Can we register a signal handler using $FC...  "
1641    check_HAVE_SIGREG
1642    if test "x$HAVE_SIGREG" != x ; then
1643        echo "yes"
1644    else
1645        echo "no"
1646    fi
1647    rm -f genmake_t*
1648    
1649    printf "  Can we use stat() through C calls...  "
1650    check_HAVE_STAT
1651    if test "x$HAVE_STAT" != x ; then
1652        echo "yes"
1653    else
1654        echo "no"
1655  fi  fi
1656  rm -f genmake_t*  rm -f genmake_t*
1657    
# Line 1197  if test "x$HAVE_NETCDF" != x ; then Line 1662  if test "x$HAVE_NETCDF" != x ; then
1662  else  else
1663      echo "no"      echo "no"
1664  fi  fi
1665    DEFINES="$DEFINES $IGNORE_TIME"
1666    
1667    if test "x$EMBED_SRC" = xt ; then
1668        build_embed_encode
1669    fi
1670    if test "x$EMBED_SRC" = xt ; then
1671        ENABLE="$ENABLE embed_files"
1672    fi
1673    
1674    
1675  printf "\n===  Setting defaults  ===\n"  printf "\n===  Setting defaults  ===\n"
# Line 1214  for d in $MODS ; do Line 1687  for d in $MODS ; do
1687  done  done
1688  echo  echo
1689    
 if test "x$MAKEFILE" = x ; then  
     MAKEFILE="Makefile"  
 fi  
1690  if test "x${PLATFORM}" = x ; then  if test "x${PLATFORM}" = x ; then
1691      PLATFORM=$p_PLATFORM      PLATFORM=$p_PLATFORM
1692  fi  fi
1693    
1694  if test "x${EXEDIR}" = x ; then  if test "x${EXEDIR}" = x ; then
1695      if test "${PWD##/*/}" = "bin" -a -d ../exe -a $ROOTDIR = .. ; then      tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1696        if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1697          EXEDIR=../exe          EXEDIR=../exe
1698      else      else
1699          EXEDIR=.          EXEDIR=.
# Line 1241  if test ! -d ${TOOLSDIR} ; then Line 1712  if test ! -d ${TOOLSDIR} ; then
1712      exit 1      exit 1
1713  fi  fi
1714  if test "x$S64" = x ; then  if test "x$S64" = x ; then
1715      S64='$(TOOLSDIR)/set64bitConst.sh'      echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1716        RETVAL=$?
1717        if test "x${RETVAL}" = x0 ; then
1718            S64='$(TOOLSDIR)/set64bitConst.sh'
1719        else
1720            echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1721            RETVAL=$?
1722            if test "x${RETVAL}" = x0 ; then
1723                S64='$(TOOLSDIR)/set64bitConst.csh'
1724            else
1725                cat <<EOF
1726    
1727    ERROR: neither of the two default scripts:
1728    
1729        ${TOOLSDIR}/set64bitConst.sh
1730        ${TOOLSDIR}/set64bitConst.csh
1731    
1732      are working so please check paths or specify (with \$S64) a
1733      working version of this script.
1734    
1735    EOF
1736                exit 1
1737            fi
1738        fi
1739  fi  fi
1740  THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`  THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1741    
# Line 1340  else Line 1834  else
1834              PACKAGES="$PACKAGES $i"              PACKAGES="$PACKAGES $i"
1835          done          done
1836          echo "    before group expansion packages are: $PACKAGES"          echo "    before group expansion packages are: $PACKAGES"
1837          while ! expand_pkg_groups; do echo > /dev/null; done          RET=1
1838            while test $RET = 1 ; do expand_pkg_groups; RET=$?; done
1839          echo "    after group expansion packages are:  $PACKAGES"          echo "    after group expansion packages are:  $PACKAGES"
1840      fi      fi
1841  fi  fi
# Line 1385  done Line 1880  done
1880  rm -f ./.tmp_pack  rm -f ./.tmp_pack
1881  echo "    packages are:  $PACKAGES"  echo "    packages are:  $PACKAGES"
1882    
1883    #  Check availability of NetCDF and then either build the MNC template
1884    #  files or delete mnc from the list of available packages.
1885    echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1886    RETVAL=$?
1887    if test "x$RETVAL" = x0 ; then
1888        if test "x$HAVE_NETCDF" != xt ; then
1889            cat <<EOF
1890    
1891    *********************************************************************
1892    WARNING: the "mnc" package was enabled but tests failed to compile
1893      NetCDF applications.  Please check that:
1894    
1895      1) NetCDF is correctly installed for this compiler and
1896      2) the LIBS variable (within the "optfile") specifies the correct
1897           NetCDF library to link against.
1898    
1899      Due to this failure, the "mnc" package is now DISABLED.
1900    *********************************************************************
1901    
1902    EOF
1903            PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
1904            DISABLE="$DISABLE mnc"
1905        else
1906            ( cd $ROOTDIR"/pkg/mnc" && $MAKE testclean && $MAKE templates ) > make_mnc.errors 2>&1
1907            RETVAL=$?
1908            if test "x${RETVAL}" = x0 ; then
1909                rm -f make_mnc.errors
1910            else
1911                echo "Error: problem encountered while building source files in pkg/mnc:"
1912                cat make_mnc.errors 1>&2
1913                exit 1
1914            fi
1915        fi
1916    fi
1917    
1918  echo "  applying package dependency rules"  echo "  applying package dependency rules"
1919  ck=  ck=
1920  while test "x$ck" != xtt ; do  while test "x$ck" != xtt ; do
# Line 1449  while test "x$ck" != xtt ; do Line 1979  while test "x$ck" != xtt ; do
1979              echo "  the dependency rules for \"$dname\""              echo "  the dependency rules for \"$dname\""
1980              exit 1              exit 1
1981          fi          fi
1982          i=$(( $i + 1 ))          i=`echo "$i + 1" | bc -l`
1983            #i=$(( $i + 1 ))
1984      done      done
1985      ck=$ck"t"      ck=$ck"t"
1986  done  done
# Line 1468  for i in $PACKAGES ; do Line 1999  for i in $PACKAGES ; do
1999      fi      fi
2000  done  done
2001    
 #  Build MNC templates and check for ability to build and use NetCDF  
 echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1  
 RETVAL=$?  
 if test "x$RETVAL" = x0 ; then  
     ( cd $ROOTDIR"/pkg/mnc" && $MAKE templates ) > make_mnc.errors 2>&1  
     RETVAL=$?  
     if test "x${RETVAL}" = x0 ; then  
         rm -f make_mnc.errors  
     else  
         echo "Error: problem encountered while building source files in pkg/mnc:"  
         cat make_mnc.errors 1>&2  
         exit 1  
     fi  
     if test "x$HAVE_NETCDF" != xt ; then  
         cat <<EOF  
   
 WARNING: the "mnc" package has been enabled but tests failed to  
   compile and/or execute NetCDF applications.  Please check that:  
   
   1) NetCDF is installed for your compiler and  
   2) the LIBS variable (within the 'optfile") specifies the correct  
        NetCDF library to link against.  
     
 EOF  
     fi  
 fi  
   
2002  # Create a list of #define and #undef to enable/disable packages  # Create a list of #define and #undef to enable/disable packages
2003  PACKAGES_DOT_H=PACKAGES_CONFIG.h  PACKAGES_DOT_H=PACKAGES_CONFIG.h
2004  #  The following UGLY HACK sets multiple "#undef"s and it needs to go  #  The following UGLY HACK sets multiple "#undef"s and it needs to go
# Line 1514  for n in $names ; do Line 2018  for n in $names ; do
2018              fi              fi
2019          done          done
2020          if test "x$has_pack" = xf ; then          if test "x$has_pack" = xf ; then
2021              undef=`echo "ALLOW_$n" | $AWK '{print toupper($0)}'`              undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2022              DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"              DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
2023          fi          fi
2024      fi      fi
2025  done  done
2026  ENABLED_PACKAGES=  ENABLED_PACKAGES=
2027  for i in $PACKAGES ; do  for i in $PACKAGES ; do
2028      def=`echo "ALLOW_$i" | $AWK '{print toupper($0)}'`      def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2029      ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"      ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
2030  #eh3 DEFINES="$DEFINES -D$def"  #eh3 DEFINES="$DEFINES -D$def"
2031    
# Line 1605  for i in $SOURCEDIRS ; do Line 2109  for i in $SOURCEDIRS ; do
2109          cat $i/$j >> ad_files          cat $i/$j >> ad_files
2110      done      done
2111  done  done
2112    if test ! "x"$FS = "x.f" ; then
2113        cat ad_files | sed -e "s/\.f/.$FS/g" > ad_files_f
2114        mv -f ad_files_f ad_files
2115    fi
2116    
2117  echo  echo
2118  echo "===  Creating the Makefile  ==="  echo "===  Creating the Makefile  ==="
2119  echo "  setting INCLUDES"  echo "  setting INCLUDES"
2120  for i in $INCLUDEDIRS ; do  for i in $INCLUDEDIRS ; do
2121      if ! test -d $i ; then      if test ! -d $i ; then
 #       INCLUDES="$INCLUDES -I$i"  
 #   else  
2122          echo "Warning: can't find INCLUDEDIRS=\"$i\""          echo "Warning: can't find INCLUDEDIRS=\"$i\""
2123      fi      fi
2124  done  done
2125    
2126    if test ! "x$DIVA" = x ; then
2127        echo "  Creating the pseudo-MPI include directory"
2128        INCLUDES="-I./mpi_headers $INCLUDES"
2129        rm -rf ./mpi_headers
2130        mkdir -p ./mpi_headers
2131    
2132        if test "x$MPIINCLUDEDIR" = x ; then
2133            if test "x$MPIHOME" = x ; then
2134                MPIHOME='/usr'
2135            fi
2136            MPIINCLUDEDIR='$MPIHOME/include'
2137        fi
2138        
2139        if test -r $MPIINCLUDEDIR/mpif.h ; then
2140            for i in $MPI_HEADER_FILES; do
2141                cp -p $MPIINCLUDEDIR/$i ./mpi_headers
2142            done
2143    
2144            perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h
2145        else
2146            echo " We cannot create a copy of mpif.h!"
2147            exit -1
2148        fi
2149    fi
2150    
2151  echo "  Determining the list of source and include files"  echo "  Determining the list of source and include files"
2152  rm -rf .links.tmp  rm -rf .links.tmp
2153  mkdir .links.tmp  mkdir .links.tmp
# Line 1636  for d in $alldirs ; do Line 2166  for d in $alldirs ; do
2166      for sf in $sfiles ; do      for sf in $sfiles ; do
2167          if test ! -r ".links.tmp/$sf" ; then          if test ! -r ".links.tmp/$sf" ; then
2168              if test -f "$d/$sf" ; then              if test -f "$d/$sf" ; then
2169                    ignore_f=f
2170                  case $d/$sf in                  case $d/$sf in
2171                    ./$PACKAGES_DOT_H)                    ./$PACKAGES_DOT_H)
2172                            ignore_f=t
2173                          ;;                          ;;
2174                    ./AD_CONFIG.h)                    ./AD_CONFIG.h)
2175                            ignore_f=t
2176                          ;;                          ;;
2177                    ./FC_NAMEMANGLE.h)                    ./FC_NAMEMANGLE.h)
2178                            ignore_f=t
2179                          ;;                          ;;
2180                    *)                    ./BUILD_INFO.h)
2181                          touch .links.tmp/$sf                          ignore_f=t
                         deplist="$deplist $sf"  
                         ;;  
                 esac  
                 extn=`echo $sf | $AWK -F '.' '{print $NF}'`  
                 case $extn in  
                     F)  
                         echo    " \\"  >> srclist.inc  
                         printf " $sf" >> srclist.inc  
                         ;;  
                     F90)  
                         echo    " \\"  >> f90srclist.inc  
                         printf " $sf" >> f90srclist.inc  
2182                          ;;                          ;;
2183                      c)                    ./EMBEDDED_FILES.h)
2184                          echo    " \\"  >> csrclist.inc                          ignore_f=t
                         printf " $sf" >> csrclist.inc  
2185                          ;;                          ;;
2186                      h)                    *)
2187                          echo    " \\"  >> hlist.inc                          #  For the local directory *ONLY*,
2188                          printf " $sf" >> hlist.inc                          #  ignore all soft-links
2189                          ;;                          if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then
2190                      flow)                              ignore_f=t
2191                          echo    " \\"  >> ad_flow_files.inc                          else
2192                          printf " $sf" >> ad_flow_files.inc                              touch .links.tmp/$sf
2193                                deplist="$deplist $sf"
2194                            fi
2195                          ;;                          ;;
2196                  esac                  esac
2197                    if test "x$ignore_f" = xf ; then
2198                        extn=`echo $sf | $AWK -F. '{print $NF}'`
2199                        case $extn in
2200                            F)
2201                                echo    " \\"  >> srclist.inc
2202                                printf " $sf" >> srclist.inc
2203                                ;;
2204                            F90)
2205                                echo    " \\"  >> f90srclist.inc
2206                                printf " $sf" >> f90srclist.inc
2207                                ;;
2208                            c)
2209                                echo    " \\"  >> csrclist.inc
2210                                printf " $sf" >> csrclist.inc
2211                                ;;
2212                            h)
2213                                echo    " \\"  >> hlist.inc
2214                                printf " $sf" >> hlist.inc
2215                                ;;
2216                            flow)
2217                                echo    " \\"  >> ad_flow_files.inc
2218                                printf " $sf" >> ad_flow_files.inc
2219                                ;;
2220                        esac
2221                    fi
2222              fi              fi
2223          fi          fi
2224      done      done
# Line 1688  echo "" >> f90srclist.inc Line 2236  echo "" >> f90srclist.inc
2236  echo "" >> hlist.inc  echo "" >> hlist.inc
2237  echo "" >> ad_flow_files.inc  echo "" >> ad_flow_files.inc
2238    
2239  if test -e $MAKEFILE ; then  if test -f $MAKEFILE ; then
2240      mv -f $MAKEFILE "$MAKEFILE.bak"      mv -f $MAKEFILE "$MAKEFILE.bak"
2241  fi  fi
2242  echo "  Writing makefile: $MAKEFILE"  echo "  Writing makefile: $MAKEFILE"
# Line 1699  echo "#    $THISDATE" >> $MAKEFILE Line 2247  echo "#    $THISDATE" >> $MAKEFILE
2247  echo "# by the command:" >> $MAKEFILE  echo "# by the command:" >> $MAKEFILE
2248  echo "#    $0 $G2ARGS" >> $MAKEFILE  echo "#    $0 $G2ARGS" >> $MAKEFILE
2249  echo "# executed by:" >> $MAKEFILE  echo "# executed by:" >> $MAKEFILE
2250  echo "#    $USER@${THISHOSTNAME}:${THISCWD}" >> $MAKEFILE  echo "#    ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
2251    
2252  EXE_AD=$EXECUTABLE"_ad"  EXE_AD=$EXECUTABLE"_ad"
2253  EXE_FTL=$EXECUTABLE"_ftl"  EXE_FTL=$EXECUTABLE"_ftl"
# Line 1745  ENABLED_PACKAGES = ${ENABLED_PACKAGES} Line 2293  ENABLED_PACKAGES = ${ENABLED_PACKAGES}
2293  DISABLED_PACKAGES = ${DISABLED_PACKAGES}  DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2294    
2295  # These files are created by Makefile  # These files are created by Makefile
2296  SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h  SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
   
2297  EOF  EOF
2298    
2299  #  Note: figure out some way to add Hyades JAM libraries here  if test "x$EMBED_SRC" = xt ; then
2300        echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE
2301    else
2302        echo "EMBEDDED_FILES = " >>$MAKEFILE
2303    fi
2304    
2305    #  Note: figure out some way to add Hyades JAM libraries here
2306  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
2307  # Unix ln (link)  # Unix ln (link)
2308  LN = ${LN}  LN = ${LN}
# Line 1764  KPP = ${KPP} Line 2316  KPP = ${KPP}
2316  FC = ${FC}  FC = ${FC}
2317  # Fortran compiler  # Fortran compiler
2318  F90C = ${F90C}  F90C = ${F90C}
2319    # C compiler
2320    CC = ${CC}
2321  # Link editor  # Link editor
2322  LINK = ${LINK} ${LDADD}  LINK = ${LINK} ${LDADD}
2323    
# Line 1786  CFLAGS = ${CFLAGS} Line 2340  CFLAGS = ${CFLAGS}
2340  NOOPTFILES = ${NOOPTFILES}  NOOPTFILES = ${NOOPTFILES}
2341  NOOPTFLAGS = ${NOOPTFLAGS}  NOOPTFLAGS = ${NOOPTFLAGS}
2342  # Flags and libraries needed for linking  # Flags and libraries needed for linking
2343  LIBS = ${LIBS} \$(XLIBS)  LIBS = ${LIBS}
2344  # Name of the Mekfile  # Name of the Mekfile
2345  MAKEFILE=${MAKEFILE}  MAKEFILE=${MAKEFILE}
2346    
# Line 1799  cat hlist.inc         >> $MAKEFILE Line 2353  cat hlist.inc         >> $MAKEFILE
2353  cat ad_flow_files.inc >> $MAKEFILE  cat ad_flow_files.inc >> $MAKEFILE
2354  echo >> $MAKEFILE  echo >> $MAKEFILE
2355  echo 'F77FILES =  $(SRCFILES:.F=.'$FS')'      >> $MAKEFILE  echo 'F77FILES =  $(SRCFILES:.F=.'$FS')'      >> $MAKEFILE
2356  echo 'F90FILES =  $(F90SRCFILES:.F=.'$FS90')' >> $MAKEFILE  echo 'F90FILES =  $(F90SRCFILES:.F90=.'$FS90')' >> $MAKEFILE
2357  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE
2358  echo >> $MAKEFILE  echo >> $MAKEFILE
2359  echo '.SUFFIXES:' >> $MAKEFILE  echo '.SUFFIXES:' >> $MAKEFILE
# Line 1810  rm -f ad_flow_files.inc Line 2364  rm -f ad_flow_files.inc
2364  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
2365    
2366  all: \$(EXECUTABLE)  all: \$(EXECUTABLE)
2367  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES) \$(EMBEDDED_FILES)
2368          @echo Creating \$@ ...          @echo Creating \$@ ...
2369          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2370  depend:  depend:
# Line 1819  depend: Line 2373  depend:
2373          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2374          -rm -f makedepend.out          -rm -f makedepend.out
2375    
2376    lib: libmitgcmuv.a
2377    
2378    libmitgcmuv.a: \$(OBJFILES)
2379            ar rcv libmitgcmuv.a \$(OBJFILES)
2380    
2381  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
2382    
2383  small_f: \$(F77FILES) \$(F90FILES)  small_f: \$(F77FILES) \$(F90FILES)
# Line 1847  makefile: Line 2406  makefile:
2406  cleanlinks:  cleanlinks:
2407          -find . -type l -exec rm {} \;          -find . -type l -exec rm {} \;
2408    
2409  # Special targets ($SPECIAL_FILES) which are create by make  # Special targets (SPECIAL_FILES) which are create by make
2410  ${PACKAGES_DOT_H}:  ${PACKAGES_DOT_H}:
2411          @echo Creating \$@ ...          @echo Creating \$@ ...
2412          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
# Line 1858  FC_NAMEMANGLE.h: Line 2417  FC_NAMEMANGLE.h:
2417          @echo Creating \$@ ...          @echo Creating \$@ ...
2418          echo "$FC_NAMEMANGLE" > \$@          echo "$FC_NAMEMANGLE" > \$@
2419    
2420    BUILD_INFO.h:
2421            @echo Creating \$@ ...
2422    EOF
2423    
2424    test ! "x$THISVER" = x  && echo "       -echo \"#define THISVER '$THISVER'\" > \$@"   >> $MAKEFILE
2425    test ! "x$THISUSER" = x && echo "       -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2426    test ! "x$THISDATE" = x && echo "       -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2427    test ! "x$THISHOST" = x && echo "       -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2428    
2429    if test "x$EMBED_SRC" = xt ; then
2430        cat >>$MAKEFILE <<EOF
2431    
2432    decode_files.o : EMBEDDED_FILES.h
2433    
2434    ##  \$(F77FILES)
2435    all_fF.tar.gz : \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2436            @echo Creating \$@ ...
2437            -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2438            -rm -f all_fF.tar.gz
2439            -gzip all_fF.tar
2440    
2441    EMBEDDED_FILES.h : all_fF.tar.gz
2442            @echo Creating \$@ ...
2443            -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
2444    
2445    EOF
2446    fi
2447    
2448    cat >>$MAKEFILE <<EOF
2449    
2450  # The normal chain of rules is (  .F - .$FS - .o  )  # The normal chain of rules is (  .F - .$FS - .o  )
2451    
2452  %.o : %.F  ## This nullifies any default implicit rules concerning these two file types:
2453    ## %.o : %.F
2454    
2455  .F.$FS:  .F.$FS:
2456          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
# Line 1871  FC_NAMEMANGLE.h: Line 2461  FC_NAMEMANGLE.h:
2461  .$FS90.o:  .$FS90.o:
2462          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2463  .c.o:  .c.o:
2464          \$(CC) \$(CFLAGS) -c \$<          \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
2465    
2466  # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain  # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2467  .F.p:  .F.p:
# Line 1916  cat >>$MAKEFILE <<EOF Line 2506  cat >>$MAKEFILE <<EOF
2506    
2507  # ... AD ...  # ... AD ...
2508  adall: ad_taf  adall: ad_taf
2509  adtaf: ad_taf_output.f  adtaf: ad_taf_output.$FS
2510  adtamc: ad_tamc_output.f  adtamc: ad_tamc_output.$FS
2511    
2512  ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ad_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2513          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2514          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2515          -rm -f ad_config.template          -rm -f ad_config.template
2516          @make \$(F77FILES)          @make \$(F77FILES)
2517          @make \$(AD_FLOW_FILES)          @make \$(AD_FLOW_FILES)
2518          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.$FS
2519    
2520  ad_taf_output.f: ad_input_code.f  ad_taf_output.$FS: ad_input_code.$FS
2521          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2522          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2523    
2524  adtafonly:  adtafonly:
2525          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2526          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2527    
2528  ad_taf: ad_taf_output.o \$(OBJFILES)  ad_taf: ad_taf_output.o \$(OBJFILES)
2529          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2530    
2531  ad_tamc_output.f: ad_input_code.f  ad_tamc_output.$FS: ad_input_code.$FS
2532          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.f          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
2533          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.f          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
2534    
2535  ad_tamc: ad_tamc_output.o \$(OBJFILES)  ad_tamc: ad_tamc_output.o \$(OBJFILES)
2536          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
2537    
2538    adonlyfwd:
2539            patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
2540    
2541    adtrick:
2542            patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
2543    
2544  # ... FTL ...  # ... FTL ...
2545  ftlall: ftl_taf  ftlall: ftl_taf
2546  ftltaf: ftl_taf_output.f  ftltaf: ftl_taf_output.$FS
2547  ftltamc: ftl_tamc_output.f  ftltamc: ftl_tamc_output.$FS
2548    
2549  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ftl_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2550          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2551          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2552          -rm -f ftl_config.template          -rm -f ftl_config.template
2553          @make \$(F77FILES)          @make \$(F77FILES)
2554          @make \$(AD_FLOW_FILES)          @make \$(AD_FLOW_FILES)
2555          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.f          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
2556    
2557  ftl_taf_output.f: ftl_input_code.f  ftl_taf_output.$FS: ftl_input_code.$FS
2558          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2559          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f          cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2560    
2561  ftltafonly:  ftltafonly:
2562          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2563          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f          cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2564    
2565  ftl_taf: ftl_taf_output.o \$(OBJFILES)  ftl_taf: ftl_taf_output.o \$(OBJFILES)
2566          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
2567    
2568  ftl_tamc_output.f: ftl_input_code.f  ftl_tamc_output.$FS: ftl_input_code.$FS
2569          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.f          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
2570          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.f          cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
2571    
2572  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
2573          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
2574    
2575    
2576  # ... SVD ...  # ... SVD ...
2577  svdtaf: ad_taf_output.f ftl_taf_output.f  svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
2578  svdall: svd_taf          @echo "--->>> Only ran TAF to generate SVD code!    <<<---"
2579            @echo "--->>> Do make svdall afterwards to compile. <<<---"
2580    svdall: svd_touch svd_taf
2581    
2582  svd_taf: ad_taf_output.o ftl_taf_output.o \$(OBJFILES)  svd_taf: \$(OBJFILES)
2583          \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)          \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
2584    
2585            @echo "--->>> Only COMPILE svd code! <<<---"
2586            @echo "--->>> Assumes you previously <<<---"
2587            @echo "--->>> did make svdtaf        <<<---"
2588    
2589    svd_touch:
2590            @echo "--->>> Only COMPILE svd code! <<<---"
2591            @echo "--->>> Assumes you previously <<<---"
2592            @echo "--->>> did make svdtaf        <<<---"
2593            touch ad_taf_output.$FS ftl_taf_output.$FS
2594            \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
2595            \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
2596            @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2597            cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2598            -rm -f ftl_config.template
2599    
2600  #=========================================  #=========================================
2601    

Legend:
Removed from v.1.86  
changed lines
  Added in v.1.141

  ViewVC Help
Powered by ViewVC 1.1.22