/[MITgcm]/MITgcm/tools/genmake2
ViewVC logotype

Diff of /MITgcm/tools/genmake2

Parent Directory Parent Directory | Revision Log Revision Log | View Revision Graph Revision Graph | View Patch Patch

revision 1.138 by edhill, Sun Dec 4 13:57:08 2005 UTC revision 1.167 by jmc, Mon Nov 26 21:39:58 2007 UTC
# Line 13  Line 13 
13  test_for_package_in_cpp_options() {  test_for_package_in_cpp_options() {
14      cpp_options=$1      cpp_options=$1
15      pkg=$2      pkg=$2
16      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg[ ]"
17      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg[ ]"
18      test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg[ ]"
19      test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg[ ]"
20        test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg$"
21        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg$"
22        test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg$"
23        test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg$"
24  }  }
25    
26  # Search for particular CPP #cmds associated with MPI  # Search for particular CPP #cmds associated with MPI
27  # usage: test_for_mpi_in_cpp_eeoptions CPP_file  # usage: test_for_mpi_in_cpp_eeoptions CPP_file
28  test_for_mpi_in_cpp_eeoptions() {  test_for_mpi_in_cpp_eeoptions() {
29      cpp_options=$1      cpp_options=$1
30      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI[ ]"
31      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI[ ]"
32      test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI[ ]"
33      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI[ ]"
34        test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI$"
35        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI$"
36        test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI$"
37        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI$"
38  }  }
39    
40  # Search for particular string in a file. Return 1 if detected, 0 if not  # Search for particular string in a file. Return 1 if detected, 0 if not
# Line 39  test_for_string_in_file() { Line 47  test_for_string_in_file() {
47      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
48          printf "Error: In $file there is an illegal line: "          printf "Error: In $file there is an illegal line: "
49          grep -i "$strng" $file          grep -i "$strng" $file
50          return 1          exit 99
51      fi      fi
52      return 0      return 0
53  }  }
# Line 248  build_cyrus_makedepend()  { Line 256  build_cyrus_makedepend()  {
256      fi      fi
257  }  }
258    
259    
260    build_embed_encode()
261    {
262        printf "  building the embed-encode utility...  "
263        if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then
264            if test ! -d "$ROOTDIR/tools/embed_encode" ; then
265                echo
266                echo "    Error: can't locate \"$ROOTDIR/tools/embed_encode\""
267                echo
268                EMBED_SRC=f
269                return 1
270            fi
271            clist="cc gcc c89 $CC"
272            for ic in $clist ; do
273                comm="$ic -o encode_files encode_files.c"
274                ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1
275                RETVAL=$?
276                if test "x$RETVAL" = x0 ; then
277                    echo "OK"
278                    DEFINES="$DEFINES -DHAVE_EMBED_SRC"
279                    return 0
280                fi
281            done
282            echo
283            echo "    Error: unable to build $ROOTDIR/embed_encode/encode_files"
284            echo "      so it has been disabled"
285            echo
286            EMBED_SRC=f
287            return 1
288        fi
289        echo "OK"
290        DEFINES="$DEFINES -DHAVE_EMBED_SRC"
291    }
292    
293    
294  # Guess possible config options for this host  # Guess possible config options for this host
295  find_possible_configs()  {  find_possible_configs()  {
296    
# Line 282  find_possible_configs()  { Line 325  find_possible_configs()  {
325    
326      #================================================================      #================================================================
327      #  look for possible C compilers      #  look for possible C compilers
328      tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc"      tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc icc"
329      p_CC=      p_CC=
330      for c in $tmp ; do      for c in $tmp ; do
331          rm -f ./genmake_hello.c  ./genmake_hello          rm -f ./genmake_hello.c  ./genmake_hello
# Line 321  EOF Line 364  EOF
364    
365      #================================================================      #================================================================
366      #  look for possible FORTRAN compilers      #  look for possible FORTRAN compilers
367      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95 gfortran"      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc ifort f90 f95 mpif77 mpf77 mpxlf95 gfortran g95"
368      p_FC=      p_FC=
369      for c in $tmp ; do      for c in $tmp ; do
370          rm -f ./hello.f ./hello          rm -f ./hello.f ./hello
# Line 535  Usage: "$0" [OPTIONS] Line 578  Usage: "$0" [OPTIONS]
578            *only* works if it is supported by the OPTFILE that            *only* works if it is supported by the OPTFILE that
579            is being used.            is being used.
580    
581        -ignoretime | -ignore_time | --ignoretime | --ignore_time
582              Ignore all the "wall clock" routines entirely.  This will
583              not in any way hurt the model results -- it simply means
584              that the code that checks how long the model spends in
585              various routines will give junk values.
586    
587      -ts | --ts      -ts | --ts
588            Produce timing information per timestep            Produce timing information per timestep
589        -papis | --papis
590              Produce summary MFlop/s (and IPC) with PAPI per timestep
591        -pcls | --pcls
592              Produce summary MFlop/s etc. with PCL per timestep
593        -foolad | --foolad
594              Fool the AD code generator
595        -papi | --papi
596              Performance analysis with PAPI
597        -pcl | --pcl
598              Performance analysis with PCL
599        -hpmt | --hpmt
600              Performance analysis with the HPM Toolkit
601    
602        -gsl | --gsl
603              Use GSL to control floating point rounding and precision
604        -devel | --devel
605              Add additional warning and debugging flags for development
606    
607      -mpi | --mpi      -mpi | --mpi
608            Include MPI header files and link to MPI libraries            Include MPI header files and link to MPI libraries
# Line 545  Usage: "$0" [OPTIONS] Line 611  Usage: "$0" [OPTIONS]
611            set to PATH. i.e. Include files from \$PATH/include, link to libraries            set to PATH. i.e. Include files from \$PATH/include, link to libraries
612            from \$PATH/lib and use binaries from \$PATH/bin.            from \$PATH/lib and use binaries from \$PATH/bin.
613    
614        -es | --es | -embed-source | --embed-source
615              Embed a tarball containing the full source code
616              (including the Makefile, etc.) used to build the
617              executable [off by default]
618    
619      -bash NAME      -bash NAME
620            Explicitly specify the Bourne or BASH shell to use            Explicitly specify the Bourne or BASH shell to use
621    
# Line 685  EOF Line 756  EOF
756        print *," HELLO WORLD", wtime        print *," HELLO WORLD", wtime
757        end        end
758  EOF  EOF
759      $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1      COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
760        echo $COMM >> genmake_warnings
761        $COMM >> genmake_warnings 2>&1
762      RET_F=$?      RET_F=$?
763      test -x ./genmake_tc  &&  ./genmake_tc >> genmake_warnings 2>&1      test -x ./genmake_tc  &&  ./genmake_tc >> genmake_warnings 2>&1
764      RETVAL=$?      RETVAL=$?
# Line 698  EOF Line 771  EOF
771    
772    
773  check_HAVE_SIGREG()  {  check_HAVE_SIGREG()  {
774        if test ! "x$HAVE_SIGREG" = x ; then
775            return
776        fi
777      get_fortran_c_namemangling      get_fortran_c_namemangling
778      cat <<EOF > genmake_tc_1.c      cat <<EOF > genmake_tc_1.c
779  $FC_NAMEMANGLE  $FC_NAMEMANGLE
# Line 755  EOF Line 831  EOF
831    
832    
833  check_HAVE_SETRLSTK()  {  check_HAVE_SETRLSTK()  {
834        if test "x$HAVE_SETRLSTK" = xt ; then
835            DEFINES="$DEFINES -DHAVE_SETRLSTK"
836            return
837        fi  
838        if test ! "x$HAVE_SETRLSTK" = x ; then
839            return
840        fi
841      get_fortran_c_namemangling      get_fortran_c_namemangling
842      cat <<EOF > genmake_tc_1.c      cat <<EOF > genmake_tc_1.c
843  $FC_NAMEMANGLE  $FC_NAMEMANGLE
# Line 865  EOF Line 948  EOF
948      cat genmake_tnc.F >> genmake_tnc.log      cat genmake_tnc.F >> genmake_tnc.log
949      echo "===  genmake_tnc.F  ===" >> genmake_tnc.log      echo "===  genmake_tnc.F  ===" >> genmake_tnc.log
950      RET_CPP=f      RET_CPP=f
951      COMM="$CPP $DEFINES $INCLUDES genmake_tnc.F"      COMM="cat genmake_tnc.F | $CPP $DEFINES $INCLUDES"
952      echo "$COMM" >> genmake_tnc.log      echo "$COMM" >> genmake_tnc.log
953      $COMM > genmake_tnc.$FS 2>/dev/null  &&  RET_CPP=t      eval $COMM > genmake_tnc.$FS 2>/dev/null  &&  RET_CPP=t
954      if test "x$RET_CPP" = xf ; then      if test "x$RET_CPP" = xf ; then
955          echo "  WARNING: CPP failed to pre-process the netcdf test." \          echo "  WARNING: CPP failed to pre-process the netcdf test." \
956              >> genmake_tnc.log              >> genmake_tnc.log
# Line 875  EOF Line 958  EOF
958              >> genmake_tnc.log              >> genmake_tnc.log
959      fi      fi
960      echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS  \ " >> genmake_tnc.log      echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS  \ " >> genmake_tnc.log
961      echo "  &&  $LINK -o genmake_tnc.o $LIBS" >> genmake_tnc.log      echo "  &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc.o $LIBS" >> genmake_tnc.log
962      $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \      $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
963          &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1          &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
964      RET_COMPILE=$?      RET_COMPILE=$?
965      cat genmake_tnc.log >> genmake_warnings      cat genmake_tnc.log >> genmake_warnings
966    
# Line 893  EOF Line 976  EOF
976      else      else
977          # try again with "-lnetcdf" added to the libs          # try again with "-lnetcdf" added to the libs
978          echo "try again with added '-lnetcdf'" > genmake_tnc.log          echo "try again with added '-lnetcdf'" > genmake_tnc.log
979          echo "$CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS \ " >> genmake_tnc.log          echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
980          echo " &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log          echo " &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
981          echo " &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log          echo " &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
982          $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null  \          cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null  \
983              &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \              &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
984              &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1              &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
985          RET_COMPILE=$?          RET_COMPILE=$?
986          cat genmake_tnc.log >> genmake_warnings          cat genmake_tnc.log >> genmake_warnings
987          if test "x$RET_COMPILE" = x0 ; then          if test "x$RET_COMPILE" = x0 ; then
988              LIBS="$LIBS -lnetcdf"              LIBS="$LIBS -lnetcdf"
989              HAVE_NETCDF=t              HAVE_NETCDF=t
990            else
991            # try again with "-lnetcdff" added to the libs
992                echo "try again with added '-lnetcdff -lnetcdf'" > genmake_tnc.log
993                echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
994                echo " &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
995                echo " &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
996                cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null  \
997                    &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
998                    &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdff -lnetcdf >> genmake_tnc.log 2>&1
999                RET_COMPILE=$?
1000                cat genmake_tnc.log >> genmake_warnings
1001                if test "x$RET_COMPILE" = x0 ; then
1002                    LIBS="$LIBS -lnetcdff -lnetcdf"
1003                    HAVE_NETCDF=t
1004                fi
1005          fi          fi
1006      fi      fi
1007      rm -f genmake_tnc*      rm -f genmake_tnc*
# Line 939  OPTFILE= Line 1037  OPTFILE=
1037  INCLUDES="-I. $INCLUDES"  INCLUDES="-I. $INCLUDES"
1038  FFLAGS=  FFLAGS=
1039  FOPTIM=  FOPTIM=
1040    FEXTRAFLAGS=
1041  CFLAGS=  CFLAGS=
1042  KFLAGS1=  KFLAGS1=
1043  KFLAGS2=  KFLAGS2=
# Line 950  NOOPTFLAGS= Line 1049  NOOPTFLAGS=
1049  MPI=  MPI=
1050  MPIPATH=  MPIPATH=
1051  TS=  TS=
1052    PAPIS=
1053    PCLS=
1054    FOOLAD=
1055    PAPI=
1056    PCL=
1057    HPMT=
1058    GSL=
1059    DEVEL=
1060  HAVE_TEST_L=  HAVE_TEST_L=
1061    
1062  # DEFINES checked by test compilation or command-line  # DEFINES checked by test compilation or command-line
# Line 957  HAVE_SYSTEM= Line 1064  HAVE_SYSTEM=
1064  HAVE_FDATE=  HAVE_FDATE=
1065  FC_NAMEMANGLE=  FC_NAMEMANGLE=
1066  HAVE_CLOC=  HAVE_CLOC=
1067  HAVE_SETRLSTK=  # HAVE_SETRLSTK=
1068  HAVE_STAT=  HAVE_STAT=
1069  HAVE_NETCDF=  HAVE_NETCDF=
1070  HAVE_ETIME=  HAVE_ETIME=
# Line 974  BASH= Line 1081  BASH=
1081  PWD=`pwd`  PWD=`pwd`
1082  test "x$MAKE" = x  &&  MAKE=make  test "x$MAKE" = x  &&  MAKE=make
1083  test "x$AWK" = x   &&  AWK=awk  test "x$AWK" = x   &&  AWK=awk
1084    EMBED_SRC=
1085  THISHOST=`hostname`  THISHOST=`hostname`
1086  THISCWD=`pwd`  THISCWD=`pwd`
1087  THISDATE=`date`  THISDATE=`date`
# Line 1007  TAMC_EXTRA= Line 1115  TAMC_EXTRA=
1115    
1116  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
1117  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
1118  gm_s2="FC CPP IEEE TS MPI JAM DUMPSTATE STANDARDDIRS"  gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL DEVEL MPI JAM DUMPSTATE STANDARDDIRS"
1119    
1120  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
1121  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM FEXTRAFLAGS"
1122  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
1123  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"
1124  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
# Line 1037  EOF Line 1145  EOF
1145    
1146  echo "===  Processing options files and arguments  ==="  echo "===  Processing options files and arguments  ==="
1147  gm_local="genmake_local"  gm_local="genmake_local"
 for i in . $MODS ; do  
     if test -r $i/$gm_local ; then  
         . $i/$gm_local  
         break  
     fi  
 done  
1148  printf "  getting local config information:  "  printf "  getting local config information:  "
1149  if test -f $gm_local ; then  if test -f $gm_local ; then
1150      echo "using $gm_local"      echo "using $gm_local"
# Line 1189  for ac_option in "$@" ; do Line 1291  for ac_option in "$@" ; do
1291    
1292          -ts | --ts)          -ts | --ts)
1293              TS=true ;;              TS=true ;;
1294            -papis | --papis)
1295                PAPIS=true ;;
1296            -pcls | --pcls)
1297                PCLS=true ;;
1298            -foolad | --foolad)
1299                FOOLAD=true ;;
1300            -papi | --papi)
1301                PAPI=true ;;
1302            -pcl | --pcl)
1303                PCL=true ;;
1304            -hpmt | --hpmt)
1305                HPMT=true ;;
1306    
1307            -gsl | --gsl)
1308                GSL=true ;;
1309    
1310            -devel | --devel)
1311                DEVEL=true ;;
1312    
1313          -mpi | --mpi)          -mpi | --mpi)
1314              MPI=true ;;              MPI=true ;;
# Line 1217  for ac_option in "$@" ; do Line 1337  for ac_option in "$@" ; do
1337          -ignoretime | -ignore_time | --ignoretime | --ignore_time)          -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1338              IGNORE_TIME="-DIGNORE_TIME" ;;              IGNORE_TIME="-DIGNORE_TIME" ;;
1339    
1340            -es | --es | -embed-source | --embed-source)
1341                EMBED_SRC=t ;;
1342    
1343          -*)          -*)
1344              echo "Error: unrecognized option: "$ac_option              echo "Error: unrecognized option: "$ac_option
1345              usage              usage
# Line 1235  done Line 1358  done
1358  if test -f ./.genmakerc ; then  if test -f ./.genmakerc ; then
1359      echo      echo
1360      echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""      echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
1361      echo "  file.  This file format is no longer supported.  Please see:"      echo "  file.  This file format is no longer supported.  For directions on"
1362      echo      echo "  how to setup and use the new \"genmake2\" script, please see:"
1363      echo "    http://mitgcm.org/devel_HOWTO/"      echo "    http://mitgcm.org/devel_HOWTO/"
1364      echo      echo "  and send an email to MITgcm-support@mitgcm.org if you need help."
1365      echo "  for directions on how to setup and use the new \"genmake2\" input"      echo "WARNING: ignore \"./.genmakerc\" and continue."
     echo "  files and send an email to MITgcm-support@mitgcm.org if you want help."  
1366      echo      echo
1367  fi  fi
1368    
1369  #  Find the MITgcm ${ROOTDIR}  #  Find the MITgcm ${ROOTDIR}
1370  if test "x${ROOTDIR}" = x ; then  if test "x${ROOTDIR}" = x ; then
1371      tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`      tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1372      if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then      if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesupp -a -d ../pkg ; then
1373          ROOTDIR=".."          ROOTDIR=".."
1374      else      else
1375          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
# Line 1432  fi Line 1554  fi
1554    
1555  if test ! "x$TS" = x ; then  if test ! "x$TS" = x ; then
1556        echo "  Turning on timing per timestep"        echo "  Turning on timing per timestep"
1557        DEFINES="$DEFINES -DTIME_PER_TIMESTEP"        if test ! "x$FOOLAD" = x ; then
1558                DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP"
1559          else
1560                DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1561          fi
1562          PACKAGES="$PACKAGES showflops"
1563    fi
1564    if test ! "x$PAPIS" = x ; then
1565          echo "  Turning on PAPI flop summary per timestep"
1566          echo "  Please make sure PAPIINC, PAPILIB are defined"
1567          if test ! "x$FOOLAD" = x ; then
1568                DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP"
1569          else
1570                DEFINES="$DEFINES -DUSE_PAPI_FLOPS"
1571          fi
1572          INCLUDES="$INCLUDES $PAPIINC"
1573          LIBS="$LIBS $PAPILIB"
1574          PACKAGES="$PACKAGES showflops"
1575    fi
1576    if test ! "x$PCLS" = x ; then
1577          echo "  Turning on PCL counter summary per timestep"
1578          echo "  Please make sure PCLINC, PCLLIB are defined"
1579          if test ! "x$FOOLAD" = x ; then
1580                DEFINES="$DEFINES -DUSE_PCL_FLOPS_SFP"
1581          else
1582                DEFINES="$DEFINES -DUSE_PCL_FLOPS"
1583          fi
1584          INCLUDES="$INCLUDES $PCLINC"
1585          LIBS="$LIBS $PCLLIB"
1586          PACKAGES="$PACKAGES showflops"
1587    fi
1588    if test ! "x$PAPI" = x ; then
1589          if test ! "x$PAPIS" = x ; then
1590              echo "  PAPI performance analysis and flop summary per timestep cannot co-exist!"
1591              echo "  Sticking with PAPI flop summary per timestep!"
1592          else
1593              echo "  Turning on performance analysis with PAPI"
1594              echo "  Please make sure PAPIINC, PAPILIB are defined"
1595              DEFINES="$DEFINES -DUSE_PAPI"
1596              INCLUDES="$INCLUDES $PAPIINC"
1597              LIBS="$LIBS $PAPILIB"
1598          fi
1599    fi
1600    if test ! "x$PCL" = x ; then
1601          if test ! "x$PCLS" = x ; then
1602              echo "  PCL performance analysis and flop summary per timestep cannot co-exist!"
1603              echo "  Sticking with PCL flop summary per timestep!"
1604          else
1605              echo "  Turning on performance analysis with PCL"
1606              echo "  Please make sure PCLINC, PCLLIB are defined"
1607              DEFINES="$DEFINES -DUSE_PCL"
1608              INCLUDES="$INCLUDES $PCLINC"
1609              LIBS="$LIBS $PCLLIB"
1610          fi
1611    fi
1612    if test ! "x$HPMT" = x ; then
1613          if test ! "x$PAPI" = x ; then
1614              echo "  PAPI and the HPM Toolkit cannot co-exist!"
1615              echo "  Sticking with PAPI!"
1616          else if test ! "x$PCL" = x ; then
1617              echo "  PCL and the HPM Toolkit cannot co-exist!"
1618              echo "  Sticking with PCL!"
1619          else
1620              echo "  Turning on performance analysis with the HPM Toolkit"
1621              echo "  Please make sure HPMTINC, HPMTLIB are defined"
1622              DEFINES="$DEFINES -DUSE_LIBHPM"
1623              INCLUDES="$INCLUDES $HPMTINC"
1624              LIBS="$LIBS $HPMTLIB"
1625          fi
1626          fi
1627    fi
1628    if test ! "x$GSL" = x ; then
1629          echo "  Turning on use of GSL to control floating point calculations"
1630          echo "  Please make sure GSLINC, GSLLIB are defined"
1631          DEFINES="$DEFINES -DUSE_GSL_IEEE"
1632          INCLUDES="$INCLUDES $GSLINC"
1633          LIBS="$LIBS $GSLLIB"
1634  fi  fi
1635    
1636  printf "\n===  Checking system libraries  ===\n"  printf "\n===  Checking system libraries  ===\n"
# Line 1503  if test "x$HAVE_CLOC" != x ; then Line 1701  if test "x$HAVE_CLOC" != x ; then
1701      echo "yes"      echo "yes"
1702  else  else
1703      echo "no"      echo "no"
1704        if test "x$EMBED_SRC" = xt ; then
1705            echo "    WARNING: you requested file embedding but it has"
1706            echo "      been disabled since C code cannot be called"
1707            EMBED_SRC=
1708        fi
1709  fi  fi
1710  rm -f genmake_t*  rm -f genmake_t*
1711    
1712  printf "  Can we unlimit the stack size using $FC...  "  printf "  Can we unlimit the stack size using $FC...  "
1713  check_HAVE_SETRLSTK  check_HAVE_SETRLSTK
1714  if test "x$HAVE_SETRLSTK" != x ; then  if test "x$HAVE_SETRLSTK" = xt ; then
1715      echo "yes"      echo "yes"
1716  else  else
1717      echo "no"      echo "no"
# Line 1517  rm -f genmake_t* Line 1720  rm -f genmake_t*
1720    
1721  printf "  Can we register a signal handler using $FC...  "  printf "  Can we register a signal handler using $FC...  "
1722  check_HAVE_SIGREG  check_HAVE_SIGREG
1723  if test "x$HAVE_SIGREG" != x ; then  if test "x$HAVE_SIGREG" = xt ; then
1724      echo "yes"      echo "yes"
1725  else  else
1726      echo "no"      echo "no"
# Line 1542  else Line 1745  else
1745  fi  fi
1746  DEFINES="$DEFINES $IGNORE_TIME"  DEFINES="$DEFINES $IGNORE_TIME"
1747    
1748    if test "x$EMBED_SRC" = xt ; then
1749        build_embed_encode
1750    fi
1751    if test "x$EMBED_SRC" = xt ; then
1752        ENABLE="$ENABLE embed_files"
1753    fi
1754    
1755    
1756  printf "\n===  Setting defaults  ===\n"  printf "\n===  Setting defaults  ===\n"
1757  printf "  Adding MODS directories:  "  printf "  Adding MODS directories:  "
1758  for d in $MODS ; do  for d in $MODS ; do
# Line 1627  if test -r $ROOTDIR"/eesupp/src/Makefile Line 1838  if test -r $ROOTDIR"/eesupp/src/Makefile
1838      fi      fi
1839  fi  fi
1840    
1841  #same for exch2  #same for pkg/exch2 and pkg/regrid
1842  if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then  for pdir in exch2 regrid ; do
1843      echo "  Making source files in exch2 from  templates"      if test -r $ROOTDIR"/pkg/${pdir}/Makefile" ; then
1844      ( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1          echo "  Making source files in pkg/${pdir} from templates"
1845      RETVAL=$?          ( cd $ROOTDIR"/pkg/"${pdir} && $MAKE ) > make_${pdir}.errors 2>&1
1846      if test "x${RETVAL}" = x0 ; then          RETVAL=$?
1847          rm -f make_exch2.errors          if test "x${RETVAL}" = x0 ; then
1848      else              rm -f make_${pdir}.errors
1849          echo "Error: problem encountered while building source files in exch2:"          else
1850          cat make_exch2.errors 1>&2              echo "Error: problem encountered while building source files in pkg/${pdir}:"
1851          exit 1              cat make_${pdir}.errors 1>&2
1852                exit 1
1853            fi
1854      fi      fi
1855  fi  done
1856    
1857  printf "\n===  Determining package settings  ===\n"  printf "\n===  Determining package settings  ===\n"
1858  if  test "x${PDEPEND}" = x ; then  if  test "x${PDEPEND}" = x ; then
# Line 1750  done Line 1963  done
1963  rm -f ./.tmp_pack  rm -f ./.tmp_pack
1964  echo "    packages are:  $PACKAGES"  echo "    packages are:  $PACKAGES"
1965    
1966  #  Check availability of NetCDF and then either build the MNC template  #  Check for package MNC: if NetCDF is available, then build the MNC
1967  #  files or delete mnc from the list of available packages.  #  template files ; otherwise, delete mnc from the list of packages.
1968  echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1  echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1969  RETVAL=$?  RETVAL=$?
1970  if test "x$RETVAL" = x0 ; then  if test "x$RETVAL" = x0 ; then
# Line 1785  EOF Line 1998  EOF
1998      fi      fi
1999  fi  fi
2000    
2001    #  Check for package PROFILES: if NetCDF is not available,
2002    #  then delete profiles from the list of available packages.
2003    echo $PACKAGES | grep ' profiles ' > /dev/null 2>&1
2004    RETVAL=$?
2005    if test "x$RETVAL" = x0 ; then
2006        if test "x$HAVE_NETCDF" != xt ; then
2007            cat <<EOF
2008    
2009    *********************************************************************
2010    WARNING: the "profiles" package was enabled but tests failed to
2011      compile NetCDF applications.  Please check that:
2012    
2013      1) NetCDF is correctly installed for this compiler and
2014      2) the LIBS variable (within the "optfile") specifies the correct
2015           NetCDF library to link against.
2016    
2017      Due to this failure, the "profiles" package is now DISABLED.
2018    *********************************************************************
2019    
2020    EOF
2021            PACKAGES=`echo $PACKAGES | sed -e 's/profiles//g'`
2022            DISABLE="$DISABLE profiles"
2023        fi
2024    fi
2025    
2026  echo "  applying package dependency rules"  echo "  applying package dependency rules"
2027  ck=  ck=
2028  while test "x$ck" != xtt ; do  while test "x$ck" != xtt ; do
2029      i=0      i=0
2030      # rtot=${#PNAME[@]}      # rtot=${#PNAME[@]}
2031      rtot=$nname      rtot=$nname
2032      while test $i -lt $rtot ; do      while test $i -le $rtot ; do
2033    
2034          #  Is $pname in the current $PACKAGES list?          #  Is $pname in the current $PACKAGES list?
2035          #  pname=${PNAME[$i]}          #  pname=${PNAME[$i]}
# Line 1825  while test "x$ck" != xtt ; do Line 2063  while test "x$ck" != xtt ; do
2063    
2064          #  Do we need to add $dname according to the dependency rules?          #  Do we need to add $dname according to the dependency rules?
2065          if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then          if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then
2066                #echo "   " $pname ": need to add :" $dname
2067              in_dis="f"              in_dis="f"
2068              for dis in $DISABLE ; do              for dis in $DISABLE ; do
2069                  if test "x$dis" = "x$dname" ; then                  if test "x$dis" = "x$dname" ; then
# Line 1993  for i in $INCLUDEDIRS ; do Line 2232  for i in $INCLUDEDIRS ; do
2232      fi      fi
2233  done  done
2234    
2235    if test ! "x$DIVA" = x ; then
2236        echo "  Creating the pseudo-MPI include directory"
2237        INCLUDES="-I./mpi_headers $INCLUDES"
2238        rm -rf ./mpi_headers
2239        mkdir -p ./mpi_headers
2240    
2241        if test "x$MPIINCLUDEDIR" = x ; then
2242            if test "x$MPIHOME" = x ; then
2243                MPIHOME='/usr'
2244            fi
2245            MPIINCLUDEDIR='$MPIHOME/include'
2246        fi
2247        
2248        if test -r $MPIINCLUDEDIR/mpif.h ; then
2249            for i in $MPI_HEADER_FILES; do
2250                cp -p $MPIINCLUDEDIR/$i ./mpi_headers
2251            done
2252    
2253            perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h
2254        else
2255            echo " We cannot create a copy of mpif.h!"
2256    #       exit -1
2257        fi
2258    fi
2259    
2260  echo "  Determining the list of source and include files"  echo "  Determining the list of source and include files"
2261  rm -rf .links.tmp  rm -rf .links.tmp
2262  mkdir .links.tmp  mkdir .links.tmp
2263    touch .links.tmp/foo
2264    if test ! -r ".links.tmp/foo" ; then
2265        echo
2266        echo "ERROR : something is wrong with your directory permissions or"
2267        echo "   your user file-creation mask (\"umask\") since creating a"
2268        echo "   sub-dir, touch-ing a file within it, and then reading it is"
2269        echo "   not working.  Please try setting your umask to something"
2270        echo "   sane such as:"
2271        echo
2272        echo "      umask 0002"
2273        echo
2274        echo "   and please verify that you have the proper permissions for"
2275        echo "   creating sub-directories and then reading files created"
2276        echo "   within them."
2277        echo
2278        exit 1
2279    fi
2280    rm -f .links.tmp/foo
2281  echo "# This section creates symbolic links" > srclinks.tmp  echo "# This section creates symbolic links" > srclinks.tmp
2282  echo "" >> srclinks.tmp  echo "" >> srclinks.tmp
2283  printf 'SRCFILES = '    > srclist.inc  printf 'SRCFILES = '    > srclist.inc
# Line 2014  for d in $alldirs ; do Line 2296  for d in $alldirs ; do
2296                  ignore_f=f                  ignore_f=f
2297                  case $d/$sf in                  case $d/$sf in
2298                    ./$PACKAGES_DOT_H)                    ./$PACKAGES_DOT_H)
2299                            ignore_f=t
2300                          ;;                          ;;
2301                    ./AD_CONFIG.h)                    ./AD_CONFIG.h)
2302                            ignore_f=t
2303                          ;;                          ;;
2304                    ./FC_NAMEMANGLE.h)                    ./FC_NAMEMANGLE.h)
2305                            ignore_f=t
2306                          ;;                          ;;
2307                    ./BUILD_INFO.h)                    ./BUILD_INFO.h)
2308                            ignore_f=t
2309                            ;;
2310                      ./EMBEDDED_FILES.h)
2311                            ignore_f=t
2312                          ;;                          ;;
2313                    *)                    *)
2314                          #  For the local directory *ONLY*,                          #  For the local directory *ONLY*,
# Line 2132  DISABLED_PACKAGES = ${DISABLED_PACKAGES} Line 2421  DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2421    
2422  # These files are created by Makefile  # These files are created by Makefile
2423  SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h  SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
   
2424  EOF  EOF
2425    
2426  #  Note: figure out some way to add Hyades JAM libraries here  if test "x$EMBED_SRC" = xt ; then
2427        echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE
2428    else
2429        echo "EMBEDDED_FILES = " >>$MAKEFILE
2430    fi
2431    
2432    #  Note: figure out some way to add Hyades JAM libraries here
2433  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
2434  # Unix ln (link)  # Unix ln (link)
2435  LN = ${LN}  LN = ${LN}
# Line 2163  INCLUDES = ${INCLUDES} Line 2456  INCLUDES = ${INCLUDES}
2456  KFLAGS1 = ${KFLAGS1}  KFLAGS1 = ${KFLAGS1}
2457  KFLAGS2 = ${KFLAGS2}  KFLAGS2 = ${KFLAGS2}
2458  # Optim./debug for FC  # Optim./debug for FC
2459  FFLAGS = ${FFLAGS}  FFLAGS = ${FFLAGS} ${FEXTRAFLAGS}
2460  FOPTIM = ${FOPTIM}  FOPTIM = ${FOPTIM}
2461  # Optim./debug for FC  # Optim./debug for FC
2462  F90FLAGS = ${F90FLAGS}  F90FLAGS = ${F90FLAGS}
# Line 2198  rm -f ad_flow_files.inc Line 2491  rm -f ad_flow_files.inc
2491  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
2492    
2493  all: \$(EXECUTABLE)  all: \$(EXECUTABLE)
2494  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES) \$(EMBEDDED_FILES)
2495          @echo Creating \$@ ...          @echo Creating \$@ ...
2496          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2497  depend:  depend:
# Line 2211  lib: libmitgcmuv.a Line 2504  lib: libmitgcmuv.a
2504    
2505  libmitgcmuv.a: \$(OBJFILES)  libmitgcmuv.a: \$(OBJFILES)
2506          ar rcv libmitgcmuv.a \$(OBJFILES)          ar rcv libmitgcmuv.a \$(OBJFILES)
2507            ar d   libmitgcmuv.a main.o
2508    
2509  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
2510    
# Line 2221  output.txt: \$(EXECUTABLE) Line 2515  output.txt: \$(EXECUTABLE)
2515          @\$(EXECUTABLE) > \$@          @\$(EXECUTABLE) > \$@
2516    
2517  clean:  clean:
2518          -rm -rf *.o *.$FS *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template          -rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
2519            -rm -rf *.o
2520            -rm -rf *.$FS
2521  Clean:  Clean:
2522          @make clean          @make clean
2523          @make cleanlinks          @make cleanlinks
2524          -rm -f \$(SPECIAL_FILES)          -rm -f \$(SPECIAL_FILES)
2525          -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak          -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak
2526            -rm -f taf_command taf_output taf_ad.log taf_ad_flow.log
2527  CLEAN:  CLEAN:
2528          @make Clean          @make Clean
2529          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2530          -find \$(EXEDIR) -name "*.data" -exec rm {} \;          -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2531          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2532          -rm -f \$(EXECUTABLE) output.txt STD*          -rm -f \$(EXECUTABLE) \$(EXE_AD) *.txt STD* *diagnostics.log datetime
2533            -rm -f *_MIT_CE_000.opt0000 costfunction*0000
2534            -rm -rf mnc_test_*
2535    
2536  #eh3 Makefile: makefile  #eh3 Makefile: makefile
2537  makefile:  makefile:
# Line 2260  test ! "x$THISUSER" = x && echo "      -echo Line 2559  test ! "x$THISUSER" = x && echo "      -echo
2559  test ! "x$THISDATE" = x && echo "       -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE  test ! "x$THISDATE" = x && echo "       -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2560  test ! "x$THISHOST" = x && echo "       -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE  test ! "x$THISHOST" = x && echo "       -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2561    
2562    if test "x$EMBED_SRC" = xt ; then
2563        cat >>$MAKEFILE <<EOF
2564    
2565    decode_files.o : EMBEDDED_FILES.h
2566    
2567    ##  \$(F77FILES)
2568    all_fF.tar.gz : \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2569            @echo Creating \$@ ...
2570            -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2571            -rm -f all_fF.tar.gz
2572            -gzip all_fF.tar
2573    
2574    EMBEDDED_FILES.h : all_fF.tar.gz
2575            @echo Creating \$@ ...
2576            -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
2577    
2578    EOF
2579    fi
2580    
2581  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
2582    
2583  # The normal chain of rules is (  .F - .$FS - .o  )  # The normal chain of rules is (  .F - .$FS - .o  )
# Line 2271  cat >>$MAKEFILE <<EOF Line 2589  cat >>$MAKEFILE <<EOF
2589          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2590  .$FS.o:  .$FS.o:
2591          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2592  .F90.$FS90:  .F90.o:  
         \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@  
 .$FS90.o:  
2593          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2594  .c.o:  .c.o:
2595          \$(CC) \$(CFLAGS) -c \$<          \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
2596    
2597  # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain  # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2598  .F.p:  .F.p:
# Line 2300  ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF Line 2616  ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF
2616  ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"  ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
2617  for i in $ad_vars ; do  for i in $ad_vars ; do
2618      name=$i      name=$i
2619      t1="t2=\$"`echo $i`      t1="t2=\$"`echo "$i"`
2620      eval $t1      eval $t1
2621      printf "%-20s = " $name >> $MAKEFILE      printf "%-20s = " $name >> $MAKEFILE
2622      echo $t2 >> $MAKEFILE      echo "$t2" | sed -e 's| \+| |g' >> $MAKEFILE
2623  done  done
2624    
2625  echo "  Add the source list for AD code generation"  echo "  Add the source list for AD code generation"
# Line 2320  rm -f ad_files Line 2636  rm -f ad_files
2636  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
2637    
2638  # ... AD ...  # ... AD ...
2639  adall: ad_taf  adall: \$(EXE_AD)
2640  adtaf: ad_taf_output.$FS  adtaf: ad_taf_output.$FS
2641  adtamc: ad_tamc_output.$FS  adtamc: ad_tamc_output.$FS
2642    
# Line 2340  adtafonly: Line 2656  adtafonly:
2656          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2657          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2658    
2659  ad_taf: ad_taf_output.o \$(OBJFILES)  \${EXE_AD}: ad_taf_output.o \$(OBJFILES)
2660          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)          \$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2661    
2662  ad_tamc_output.$FS: ad_input_code.$FS  ad_tamc_output.$FS: ad_input_code.$FS
2663          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS

Legend:
Removed from v.1.138  
changed lines
  Added in v.1.167

  ViewVC Help
Powered by ViewVC 1.1.22