208 |
expand_pkg_groups() { |
expand_pkg_groups() { |
209 |
new_packages= |
new_packages= |
210 |
if test -r $PKG_GROUPS ; then |
if test -r $PKG_GROUPS ; then |
211 |
cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp |
cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > $TMP.p1 |
212 |
cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp |
cat $TMP.p1 | $AWK '(NF>2 && $2==":"){ print $0 }' > $TMP.p2 |
213 |
matched=0 |
matched=0 |
214 |
for i in $PACKAGES ; do |
for i in $PACKAGES ; do |
215 |
line=`grep "^ *$i" ./p2.tmp` |
line=`grep "^ *$i" $TMP.p2` |
216 |
RETVAL=$? |
RETVAL=$? |
217 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
218 |
matched=1 |
matched=1 |
224 |
fi |
fi |
225 |
done |
done |
226 |
PACKAGES=$new_packages |
PACKAGES=$new_packages |
227 |
rm -f ./p[1,2].tmp |
rm -f $TMP.p[1,2] |
228 |
return $matched |
return $matched |
229 |
else |
else |
230 |
echo "Warning: can't read package groups definition file: $PKG_GROUPS" |
echo "Warning: can't read package groups definition file: $PKG_GROUPS" |
324 |
# |
# |
325 |
# 1) a makedepend implementation shipped with the cyrus-imapd |
# 1) a makedepend implementation shipped with the cyrus-imapd |
326 |
# package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/ |
# package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/ |
327 |
# |
# 2) a local tools/xmakedepend shell script |
|
# 2) a known-buggy xmakedpend shell script |
|
328 |
# |
# |
329 |
# So the choices are, in order: |
# So the choices are, in order: |
|
# |
|
330 |
# 1) use the user-specified program |
# 1) use the user-specified program |
331 |
# 2) use a system-wide default |
# 2) use the local xmakedepend script (get all dependencies, but slower) |
332 |
# 3) locally build and use the cyrus implementation |
# 3) use a system-wide default |
333 |
# 4) fall back to the buggy local xmakedpend script |
# 4) locally build and use the cyrus makedepend |
334 |
|
# (faster, but can miss some dependencies) |
335 |
# |
# |
336 |
echo >> $LOGFILE |
echo >> $LOGFILE |
337 |
echo "running: look_for_makedepend()" >> $LOGFILE |
echo "running: look_for_makedepend()" >> $LOGFILE |
342 |
build_cyrus_makedepend |
build_cyrus_makedepend |
343 |
RETVAL=$? |
RETVAL=$? |
344 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
345 |
echo "WARNING: unable to build cyrus-makedepend. Try 'makedepend'" |
echo "WARNING: unable to build cyrus-makedepend. Try other 'makedepend'" |
346 |
MAKEDEPEND= |
MAKEDEPEND= |
347 |
fi |
fi |
348 |
else |
else |
355 |
fi |
fi |
356 |
fi |
fi |
357 |
if test "x${MAKEDEPEND}" = x ; then |
if test "x${MAKEDEPEND}" = x ; then |
|
which makedepend > /dev/null 2>&1 |
|
|
RV0=$? |
|
358 |
test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst" |
test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst" |
359 |
# echo 'MAKEFILE="'$MAKEFILE'"' |
# echo 'MAKEFILE="'$MAKEFILE'"' |
360 |
cat <<EOF >> $MAKEFILE |
cat <<EOF >> $MAKEFILE |
370 |
stop |
stop |
371 |
end |
end |
372 |
EOF |
EOF |
373 |
makedepend -f $MAKEFILE genmake_tc.f > /dev/null 2>&1 |
$ROOTDIR/tools/xmakedepend -f $MAKEFILE genmake_tc.f > /dev/null 2>&1 |
374 |
RV1=$? |
RV1=$? |
375 |
|
which makedepend > /dev/null 2>&1 |
376 |
|
RV2=$? |
377 |
|
if test "x${RV2}" = x0 ; then |
378 |
|
makedepend -f $MAKEFILE genmake_tc.f > /dev/null 2>&1 |
379 |
|
RV3=$? ; loc_msg='not working.' |
380 |
|
else RV3=$RV2 ; loc_msg='not found.' |
381 |
|
fi |
382 |
test -f $MAKEFILE && rm -f $MAKEFILE |
test -f $MAKEFILE && rm -f $MAKEFILE |
383 |
test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE |
test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE |
384 |
if test "x${RV0}${RV1}" = x00 ; then |
echo " check makedepend (local: $RV1, system: $RV2, $RV3)" |
385 |
|
if test "x${RV1}" = x0 ; then |
386 |
|
MAKEDEPEND='$(TOOLSDIR)/xmakedepend' |
387 |
|
echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE |
388 |
|
elif test "x${RV3}" = x0 ; then |
389 |
|
echo " local tools/xmakedepend not working. Use system-default makedepend" |
390 |
MAKEDEPEND=makedepend |
MAKEDEPEND=makedepend |
391 |
echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE |
echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE |
392 |
else |
else |
393 |
echo " system-default makedepend not found. Try to build cyrus-makedepend" |
echo " local tools/xmakedepend not working; system-default makedepend $loc_msg" |
394 |
|
echo -n " Try to build cyrus-makedepend ..." |
395 |
# Try to build the cyrus implementation |
# Try to build the cyrus implementation |
396 |
build_cyrus_makedepend |
build_cyrus_makedepend |
397 |
RETVAL=$? |
RETVAL=$? |
398 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" = x0 ; then |
399 |
echo "WARNING: unable to build cyrus-makedepend. Use local xmakedepend" |
echo " Works" |
400 |
MAKEDEPEND='$(TOOLSDIR)/xmakedepend' |
else |
401 |
echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE |
echo " Fails" ; echo "" >> $LOGFILE |
402 |
|
echo "ERROR: no working makedepend found ; look_for_makedepend FAILED" | tee -a $LOGFILE |
403 |
|
echo "" |
404 |
|
exit -1 |
405 |
|
return |
406 |
fi |
fi |
407 |
fi |
fi |
408 |
fi |
fi |
602 |
fi |
fi |
603 |
} |
} |
604 |
|
|
605 |
|
# Do a local copy of MPI headers files (in local dir ./mpi_headers/) after |
606 |
|
# checking for additional included headers (in case of chain of included header) |
607 |
|
mpi_headers_do_local_copy() { |
608 |
|
|
609 |
|
dBug=0 |
610 |
|
rm -rf ./mpi_headers |
611 |
|
if test -d $MPIINCLUDEDIR ; then |
612 |
|
|
613 |
|
#----- check for additional headers (chain of included headers) |
614 |
|
echo -n ' Check MPI headers ... ' |
615 |
|
listIni=$MPI_HEADER_FILES |
616 |
|
echo $listIni | grep "\<mpif.h\>" > /dev/null 2>&1 |
617 |
|
outp=$? |
618 |
|
#- always check mpif.h (the only mpi-header included in standard MITgcm code) |
619 |
|
if test $outp != 0 ; then listIni="mpif.h $listIni" ; fi |
620 |
|
if test $dBug = 1 ; then echo "listIni='$listIni'" ; fi |
621 |
|
|
622 |
|
doCheck=1 ; list2copy='' ; list2check=$listIni |
623 |
|
while test $doCheck = 1 ; do |
624 |
|
newList='' |
625 |
|
for i in $list2check ; do |
626 |
|
if test -f $MPIINCLUDEDIR/$i ; then |
627 |
|
newInc=`grep '^ *include ' $MPIINCLUDEDIR/$i | \ |
628 |
|
sed -e 's/^ *include //' -e 's/\!.*$//' -e "s/'//g" -e 's/\"//g'` |
629 |
|
if test $dBug = 1 ; then echo -n "checking $i : newInc='$newInc'" ; fi |
630 |
|
for j in $newInc ; do |
631 |
|
echo $listIni $list2copy $newList | grep "\<$j\>" > /dev/null 2>&1 |
632 |
|
outp=$? |
633 |
|
if test $outp != 0 ; then |
634 |
|
if test $dBug = 1 ; then echo -n " ; adding $j" ; fi |
635 |
|
newList="$newList $j" |
636 |
|
fi |
637 |
|
done |
638 |
|
if test $dBug = 1 ; then echo "" ; fi |
639 |
|
fi |
640 |
|
done |
641 |
|
if test "x$newList" = x ; then doCheck=0 |
642 |
|
else list2check=$newList ; list2copy="$list2copy $newList" |
643 |
|
fi |
644 |
|
done |
645 |
|
list2copy="$MPI_HEADER_FILES $list2copy" |
646 |
|
if test $dBug = 1 ; then echo "list2copy='$list2copy'" ; fi |
647 |
|
|
648 |
|
#----- create local mpi_headers dir if we have files to copy |
649 |
|
mkListInc=`echo $list2copy | wc -w` |
650 |
|
if test $mkListInc != 0 ; then |
651 |
|
echo 'create local "./mpi_headers" dir' |
652 |
|
mkdir -p ./mpi_headers |
653 |
|
INCLUDES="-I./mpi_headers $INCLUDES" |
654 |
|
mkListInc=1 |
655 |
|
fi |
656 |
|
if test "x$LOCAL_MPI_HEADERS" != x ; then mkListInc=0 ; fi |
657 |
|
|
658 |
|
#----- make local copy and update LOCAL_MPI_HEADERS (if not already set) |
659 |
|
for i in $list2copy ; do |
660 |
|
if test -f $MPIINCLUDEDIR/$i ; then |
661 |
|
cp -p $MPIINCLUDEDIR/$i ./mpi_headers |
662 |
|
if test $i = 'mpif.h' ; then |
663 |
|
perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h |
664 |
|
fi |
665 |
|
if test $mkListInc = 2 ; then |
666 |
|
LOCAL_MPI_HEADERS="$LOCAL_MPI_HEADERS ./mpi_headers/$i" |
667 |
|
fi |
668 |
|
if test $mkListInc = 1 ; then |
669 |
|
LOCAL_MPI_HEADERS="./mpi_headers/$i" ; mkListInc=2 |
670 |
|
fi |
671 |
|
fi |
672 |
|
done |
673 |
|
else |
674 |
|
echo "WARNING: MPIINCLUDEDIR='$MPIINCLUDEDIR' is not a directory" |
675 |
|
echo "WARNING: => skip checking for MPI headers (no ./mpi_headers dir)" |
676 |
|
# exit -1 |
677 |
|
fi |
678 |
|
} |
679 |
|
|
680 |
# Parse the package dependency information |
# Parse the package dependency information |
681 |
get_pdepend_list() { |
get_pdepend_list() { |
682 |
|
|
996 |
program fgennc |
program fgennc |
997 |
#include "netcdf.inc" |
#include "netcdf.inc" |
998 |
EOF |
EOF |
999 |
if test ! "x$MPI" = x ; then |
#if test ! "x$MPI" = x ; then |
1000 |
echo '#include "mpif.h"' >> genmake_tnc.F |
# echo '#include "mpif.h"' >> genmake_tnc.F |
1001 |
fi |
#fi |
1002 |
cat <<EOF >> genmake_tnc.F |
cat <<EOF >> genmake_tnc.F |
1003 |
integer iret, ncid, xid |
integer iret, ncid, xid |
1004 |
iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid) |
iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid) |
1181 |
echo " --> set HAVE_LAPACK='$HAVE_LAPACK'" >> $LOGFILE |
echo " --> set HAVE_LAPACK='$HAVE_LAPACK'" >> $LOGFILE |
1182 |
} |
} |
1183 |
|
|
1184 |
|
check_HAVE_FLUSH() { |
1185 |
|
if test ! "x$SKIP_CHECK_FLUSH" = x ; then |
1186 |
|
return |
1187 |
|
fi |
1188 |
|
echo >> $LOGFILE |
1189 |
|
echo "running: check_HAVE_FLUSH()" >> $LOGFILE |
1190 |
|
cat <<EOF > genmake_tflsh.$FS |
1191 |
|
program fgenflsh |
1192 |
|
integer iounit |
1193 |
|
character*9 fname |
1194 |
|
iounit = 26 |
1195 |
|
fname = 'tmp.tflsh' |
1196 |
|
open(iounit,FILE=fname,STATUS='unknown') |
1197 |
|
write(iounit,*) 'genmake_tflsh: hello' |
1198 |
|
call flush(iounit) |
1199 |
|
close(iounit) |
1200 |
|
end |
1201 |
|
EOF |
1202 |
|
echo "=== genmake_tflsh.$FS >>>" > genmake_tflsh.log |
1203 |
|
cat genmake_tflsh.$FS >> genmake_tflsh.log |
1204 |
|
echo "<<< genmake_tflsh.$FS ===" >> genmake_tflsh.log |
1205 |
|
|
1206 |
|
echo "$FC $FFLAGS $FOPTIM -c genmake_tflsh.$FS \ " >> genmake_tflsh.log |
1207 |
|
echo " && $LINK $FFLAGS $FOPTIM -o genmake_tflsh.o $LIBS" >> genmake_tflsh.log |
1208 |
|
$FC $FFLAGS $FOPTIM -c genmake_tflsh.$FS >> genmake_tflsh.log 2>&1 \ |
1209 |
|
&& $LINK $FFLAGS $FOPTIM -o genmake_tflsh genmake_tflsh.o $LIBS >> genmake_tflsh.log 2>&1 |
1210 |
|
RET_COMPILE=$? |
1211 |
|
|
1212 |
|
if test "x$RET_COMPILE" = x0 ; then |
1213 |
|
HAVE_FLUSH=t |
1214 |
|
#cat genmake_tflsh.log >> $LOGFILE |
1215 |
|
echo " check_HAVE_FLUSH: successful" >> $LOGFILE |
1216 |
|
else |
1217 |
|
HAVE_FLUSH=f |
1218 |
|
cat genmake_tflsh.log >> $LOGFILE |
1219 |
|
fi |
1220 |
|
rm -f genmake_tflsh* |
1221 |
|
echo " --> set HAVE_FLUSH='$HAVE_FLUSH'" >> $LOGFILE |
1222 |
|
} |
1223 |
|
|
1224 |
############################################################################### |
############################################################################### |
1225 |
# Sequential part of script starts here |
# Sequential part of script starts here |
1277 |
DEVEL= |
DEVEL= |
1278 |
HAVE_TEST_L= |
HAVE_TEST_L= |
1279 |
|
|
1280 |
|
# comment this line out to enable lapack test |
1281 |
|
SKIP_LAPACK_CHECK=t |
1282 |
|
|
1283 |
# DEFINES checked by test compilation or command-line |
# DEFINES checked by test compilation or command-line |
1284 |
HAVE_SYSTEM= |
HAVE_SYSTEM= |
1285 |
HAVE_FDATE= |
HAVE_FDATE= |
1291 |
HAVE_ETIME= |
HAVE_ETIME= |
1292 |
IGNORE_TIME= |
IGNORE_TIME= |
1293 |
HAVE_LAPACK= |
HAVE_LAPACK= |
1294 |
|
HAVE_FLUSH= |
1295 |
|
|
1296 |
MODS= |
MODS= |
1297 |
TOOLSDIR= |
TOOLSDIR= |
1337 |
SVD_TAMC_FLAGS= |
SVD_TAMC_FLAGS= |
1338 |
TAMC_EXTRA= |
TAMC_EXTRA= |
1339 |
|
|
1340 |
|
DIVA= |
1341 |
|
MPIINCLUDEDIR= |
1342 |
|
MPI_HEADER_FILES= |
1343 |
|
LOCAL_MPI_HEADERS= |
1344 |
|
|
1345 |
# The following state can be set directly by command-line switches |
# The following state can be set directly by command-line switches |
1346 |
gm_s1="ROOTDIR STANDARDDIRS MODS PKG_DEPEND PKG_GROUPS DISABLE ENABLE" |
gm_s1="ROOTDIR STANDARDDIRS MODS PKG_DEPEND PKG_GROUPS DISABLE ENABLE" |
1347 |
gm_s2="PLATFORM OPTFILE MAKE MAKEFILE MAKEDEPEND FC CC MPI OMP USE_R4" |
gm_s2="PLATFORM OPTFILE MAKE MAKEFILE MAKEDEPEND FC CC MPI OMP USE_R4" |
1350 |
# The following state is not directly set by command-line switches |
# The following state is not directly set by command-line switches |
1351 |
gm_s4="LN S64 LINK PACKAGES INCLUDES FFLAGS FOPTIM" |
gm_s4="LN S64 LINK PACKAGES INCLUDES FFLAGS FOPTIM" |
1352 |
gm_s5="CFLAGS LIBS KPP KFLAGS1 KFLAGS2 KPPFILES NOOPTFILES NOOPTFLAGS" |
gm_s5="CFLAGS LIBS KPP KFLAGS1 KFLAGS2 KPPFILES NOOPTFILES NOOPTFLAGS" |
1353 |
gm_s6="TOOLSDIR SOURCEDIRS INCLUDEDIRS EXEDIR EXECUTABLE EXEHOOK" |
gm_s6="PWD TOOLSDIR SOURCEDIRS INCLUDEDIRS EXEDIR EXECUTABLE EXEHOOK" |
1354 |
gm_s7="PWD THISHOST THISUSER THISDATE THISVER MACHINE" |
gm_s7="TMP THISHOST THISUSER THISDATE THISVER MACHINE FC_NAMEMANGLE" |
1355 |
gm_s8="FC_NAMEMANGLE HAVE_NETCDF HAVE_SYSTEM HAVE_FDATE HAVE_ETIME HAVE_LAPACK" |
gm_s8="HAVE_NETCDF HAVE_SYSTEM HAVE_FDATE HAVE_ETIME HAVE_LAPACK HAVE_FLUSH" |
1356 |
|
|
1357 |
# The following are all related to adjoint/tangent-linear stuff |
# The following are all related to adjoint/tangent-linear stuff |
1358 |
gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS" |
gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS" |
1359 |
gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS" |
gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS" |
1360 |
gm_s12="TAF_EXTRA TAMC_EXTRA" |
gm_s12="TAF_EXTRA TAMC_EXTRA DIVA MPIINCLUDEDIR MPI_HEADER_FILES" |
1361 |
|
|
1362 |
gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7 $gm_s8" |
gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7 $gm_s8" |
1363 |
gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12" |
gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12" |
1576 |
|
|
1577 |
done |
done |
1578 |
|
|
1579 |
|
#TMP=./genmk_$$ |
1580 |
|
#- try to put temporary files in system-local /tmp dir |
1581 |
|
TMP=/tmp/genmk_$$ |
1582 |
|
touch $TMP ; retVal=$? |
1583 |
|
if [ $retVal -eq 0 ] ; then |
1584 |
|
if test ! -r $TMP ; then TMP=./genmk_$$ ; fi |
1585 |
|
else |
1586 |
|
TMP=./genmk_$$ |
1587 |
|
fi |
1588 |
|
rm -f $TMP |
1589 |
|
#echo " temp files: $TMP.*" |
1590 |
|
|
1591 |
printf " getting local config information: " |
printf " getting local config information: " |
1592 |
if test -f $gm_local ; then |
if test -f $gm_local ; then |
1593 |
echo "using $gm_local" |
echo "using $gm_local" |
1808 |
if test ! "x$MPI" = x ; then |
if test ! "x$MPI" = x ; then |
1809 |
echo " Turning on MPI cpp macros" |
echo " Turning on MPI cpp macros" |
1810 |
DEFINES="$DEFINES -DALLOW_USE_MPI" |
DEFINES="$DEFINES -DALLOW_USE_MPI" |
1811 |
|
#- To compile code older than checkpoint63s (2012/09/05), un-comment the following line: |
1812 |
|
# DEFINES="$DEFINES -DALWAYS_USE_MPI" |
1813 |
fi |
fi |
1814 |
if test ! "x$OMP" = x ; then |
if test ! "x$OMP" = x ; then |
1815 |
echo " Add OMPFLAG and turn on OpenMP cpp macros" |
echo " Add OMPFLAG and turn on OpenMP cpp macros" |
2034 |
else |
else |
2035 |
echo "no" |
echo "no" |
2036 |
fi |
fi |
|
DEFINES="$DEFINES $IGNORE_TIME" |
|
2037 |
|
|
2038 |
|
printf " Can we call FLUSH intrinsic subroutine... " |
2039 |
|
check_HAVE_FLUSH |
2040 |
|
if test "x$HAVE_FLUSH" = xt ; then |
2041 |
|
DEFINES="$DEFINES -DHAVE_FLUSH" |
2042 |
|
echo "yes" |
2043 |
|
else |
2044 |
|
echo "no" |
2045 |
|
fi |
2046 |
|
|
2047 |
|
DEFINES="$DEFINES $IGNORE_TIME" |
2048 |
if test "x$EMBED_SRC" = xt ; then |
if test "x$EMBED_SRC" = xt ; then |
2049 |
build_embed_encode |
build_embed_encode |
2050 |
fi |
fi |
2249 |
fi |
fi |
2250 |
|
|
2251 |
echo " applying DISABLE settings" |
echo " applying DISABLE settings" |
2252 |
echo "" > ./.tmp_pack |
echo "" > $TMP.pack |
2253 |
for i in $PACKAGES ; do |
for i in $PACKAGES ; do |
2254 |
echo $i >> ./.tmp_pack |
echo $i >> $TMP.pack |
2255 |
done |
done |
2256 |
for i in `grep "-" ./.tmp_pack` ; do |
for i in `grep "-" $TMP.pack` ; do |
2257 |
j=`echo $i | sed 's/[-]//'` |
j=`echo $i | sed 's/[-]//'` |
2258 |
DISABLE="$DISABLE $j" |
DISABLE="$DISABLE $j" |
2259 |
done |
done |
2271 |
done |
done |
2272 |
PACKAGES="$pack" |
PACKAGES="$pack" |
2273 |
echo " applying ENABLE settings" |
echo " applying ENABLE settings" |
2274 |
echo "" > ./.tmp_pack |
echo "" > $TMP.pack |
2275 |
PACKAGES="$PACKAGES $ENABLE" |
PACKAGES="$PACKAGES $ENABLE" |
2276 |
# Test if each explicitly referenced package exists |
# Test if each explicitly referenced package exists |
2277 |
for i in $PACKAGES ; do |
for i in $PACKAGES ; do |
2280 |
echo "Error: dir '$ROOTDIR/pkg/$i' missing for package '$i'" |
echo "Error: dir '$ROOTDIR/pkg/$i' missing for package '$i'" |
2281 |
exit 1 |
exit 1 |
2282 |
fi |
fi |
2283 |
echo $i >> ./.tmp_pack |
echo $i >> $TMP.pack |
2284 |
done |
done |
2285 |
PACKAGES= |
PACKAGES= |
2286 |
for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do |
for i in `grep -v "-" $TMP.pack | sort | uniq` ; do |
2287 |
PACKAGES="$PACKAGES $i" |
PACKAGES="$PACKAGES $i" |
2288 |
done |
done |
2289 |
rm -f ./.tmp_pack |
rm -f $TMP.pack |
2290 |
echo " packages are: $PACKAGES" |
echo " packages are: $PACKAGES" |
2291 |
|
|
2292 |
# Check for package MNC: if NetCDF is available, then build the MNC |
# Check for package MNC: if NetCDF is available, then build the MNC |
2377 |
fi |
fi |
2378 |
fi |
fi |
2379 |
|
|
2380 |
|
# Make sure the openad package is enabled if using OpenAD |
2381 |
|
if test "x$OPENAD" != x ; then |
2382 |
|
echo " $PACKAGES " | grep ' openad ' > /dev/null 2>&1 |
2383 |
|
RETVAL=$? |
2384 |
|
if test "x$RETVAL" != x0 ; then |
2385 |
|
cat <<EOF |
2386 |
|
|
2387 |
|
********************************************************************* |
2388 |
|
ERROR: when generating an adjoint with OpenAD, the openad package |
2389 |
|
must be enabled. Please add it to packages.conf. |
2390 |
|
********************************************************************* |
2391 |
|
|
2392 |
|
EOF |
2393 |
|
exit 1 |
2394 |
|
fi |
2395 |
|
fi |
2396 |
|
|
2397 |
if test "x${PKG_DEPEND}" != x ; then |
if test "x${PKG_DEPEND}" != x ; then |
2398 |
echo " applying package dependency rules" |
echo " applying package dependency rules" |
2399 |
ck= |
ck= |
2582 |
|
|
2583 |
# Here, we build the list of files to be "run through" the adjoint |
# Here, we build the list of files to be "run through" the adjoint |
2584 |
# compiler. |
# compiler. |
2585 |
if test -f ./adSrcFiles.tmp ; then |
if test -f $TMP.adSrcFiles ; then |
2586 |
rm -f ./adSrcFiles.tmp |
rm -f $TMP.adSrcFiles |
2587 |
fi |
fi |
2588 |
echo " Creating the list of files for the adjoint compiler." |
echo " Creating the list of files for the adjoint compiler." |
2589 |
touch adSrcFiles.tmp |
touch $TMP.adSrcFiles |
2590 |
for i in $SOURCEDIRS ; do |
for i in $SOURCEDIRS ; do |
2591 |
list_files=`( cd $i && ls -1 *.list 2>/dev/null )` |
list_files=`( cd $i && ls -1 *.list 2>/dev/null )` |
2592 |
for j in $list_files ; do |
for j in $list_files ; do |
2593 |
cat $i/$j >> adSrcFiles.tmp |
cat $i/$j >> $TMP.adSrcFiles |
2594 |
done |
done |
2595 |
done |
done |
2596 |
if test ! "x"$FS = "x.f" ; then |
if test ! "x"$FS = "x.f" ; then |
2597 |
cat adSrcFiles.tmp | sed -e "s/\.f/.$FS/g" > adSrcFiles.tmp_f |
cat $TMP.adSrcFiles | sed -e "s/\.f/.$FS/g" > $TMP.adSrcFiles_f |
2598 |
mv -f adSrcFiles.tmp_f adSrcFiles.tmp |
mv -f $TMP.adSrcFiles_f $TMP.adSrcFiles |
2599 |
fi |
fi |
2600 |
|
|
2601 |
echo |
echo |
2607 |
fi |
fi |
2608 |
done |
done |
2609 |
|
|
2610 |
if test ! "x$DIVA" = x ; then |
if test ! "x$DIVA" = x -a ! "x$MPI" = x ; then |
2611 |
echo " Creating the pseudo-MPI include directory" |
if test ! "x$MPIINCLUDEDIR" = x ; then |
2612 |
INCLUDES="-I./mpi_headers $INCLUDES" |
# Do a local copy of MPI headers files (in local dir ./mpi_headers/) after |
2613 |
rm -rf ./mpi_headers |
# checking for additional included headers (in case of chain of included |
2614 |
mkdir -p ./mpi_headers |
# header); also set LOCAL_MPI_HEADERS (if not already set) |
2615 |
|
mpi_headers_do_local_copy |
|
if test "x$MPIINCLUDEDIR" = x ; then |
|
|
if test "x$MPIHOME" = x ; then |
|
|
MPIHOME='/usr' |
|
|
fi |
|
|
MPIINCLUDEDIR='$MPIHOME/include' |
|
|
fi |
|
|
|
|
|
if test -r $MPIINCLUDEDIR/mpif.h ; then |
|
|
for i in $MPI_HEADER_FILES; do |
|
|
cp -p $MPIINCLUDEDIR/$i ./mpi_headers |
|
|
done |
|
|
|
|
|
perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h |
|
|
else |
|
|
echo " We cannot create a copy of mpif.h!" |
|
|
# exit -1 |
|
2616 |
fi |
fi |
2617 |
fi |
fi |
2618 |
|
|
2619 |
echo " Determining the list of source and include files" |
echo " Determining the list of source and include files" |
2620 |
rm -rf .links.tmp |
rm -rf $TMP.links |
2621 |
mkdir .links.tmp |
mkdir $TMP.links |
2622 |
touch .links.tmp/foo |
touch $TMP.links/foo |
2623 |
if test ! -r ".links.tmp/foo" ; then |
if test ! -r "$TMP.links/foo" ; then |
2624 |
echo |
echo |
2625 |
echo "ERROR : something is wrong with your directory permissions or" |
echo "ERROR : something is wrong with your directory permissions or" |
2626 |
echo " your user file-creation mask (\"umask\") since creating a" |
echo " your user file-creation mask (\"umask\") since creating a" |
2636 |
echo |
echo |
2637 |
exit 1 |
exit 1 |
2638 |
fi |
fi |
2639 |
rm -f .links.tmp/foo |
rm -f $TMP.links/foo |
2640 |
|
|
2641 |
if test "x$OPENAD" != x ; then |
if test "x$OPENAD" != x ; then |
2642 |
OAD_DONT_COMPILE="/dev/null" |
OAD_DONT_COMPILE="/dev/null" |
2644 |
OAD_KEEP_ORIGINAL="/dev/null" |
OAD_KEEP_ORIGINAL="/dev/null" |
2645 |
OAD_CB2M_FILES="/dev/null" |
OAD_CB2M_FILES="/dev/null" |
2646 |
OADTOOLS="$TOOLSDIR/OAD_support" |
OADTOOLS="$TOOLSDIR/OAD_support" |
|
test -f "oadtempflile" && \rm -f "oadtempflile" |
|
|
cat >> "oadtempflile" <<EOF |
|
|
$OADTOOLS |
|
|
EOF |
|
2647 |
echo " looking for dontCompile file: " |
echo " looking for dontCompile file: " |
2648 |
for i in "." $MODS ; do |
for i in "." $MODS ; do |
2649 |
if test -r $i"/dontCompile" ; then |
if test -r $i"/dontCompile" ; then |
2679 |
echo " OpenAD exceptions: " |
echo " OpenAD exceptions: " |
2680 |
fi |
fi |
2681 |
|
|
2682 |
echo "# This section creates symbolic links" > srclinks.tmp |
echo "# This section creates symbolic links" > $TMP.srclinks |
2683 |
echo "" >> srclinks.tmp |
echo "" >> $TMP.srclinks |
2684 |
printf 'F77_SRC_FILES = ' > F77srclist.tmp |
printf 'F77_SRC_FILES = ' > $TMP.F77srclist |
2685 |
printf 'NON_AD_F77_SRC_FILES = ' > nonADF77srclist.tmp |
printf 'NON_AD_F77_SRC_FILES = ' > $TMP.nonADF77srclist |
2686 |
printf 'C_SRC_FILES = ' > csrclist.tmp |
printf 'C_SRC_FILES = ' > $TMP.csrclist |
2687 |
printf 'F90_SRC_FILES = ' > F90srclist.tmp |
printf 'F90_SRC_FILES = ' > $TMP.F90srclist |
2688 |
printf 'H_SRC_FILES = ' > hsrclist.tmp |
printf 'H_SRC_FILES = ' > $TMP.hsrclist |
2689 |
printf 'AD_FLOW_FILES = ' > ad_flow_files.tmp |
printf 'AD_FLOW_FILES = ' > $TMP.ad_flow_files |
2690 |
alldirs="$SOURCEDIRS $INCLUDEDIRS ." |
alldirs="$SOURCEDIRS $INCLUDEDIRS ." |
2691 |
for d in $alldirs ; do |
for d in $alldirs ; do |
2692 |
deplist= |
deplist= |
2696 |
sfiles=`( echo $sfiles | grep -v _cb2m\. )` |
sfiles=`( echo $sfiles | grep -v _cb2m\. )` |
2697 |
fi |
fi |
2698 |
for sf in $sfiles ; do |
for sf in $sfiles ; do |
2699 |
if test ! -r ".links.tmp/$sf" ; then |
if test ! -r "$TMP.links/$sf" ; then |
2700 |
if test -f "$d/$sf" ; then |
if test -f "$d/$sf" ; then |
2701 |
ignore_f=f |
ignore_f=f |
2702 |
case $d/$sf in |
case $d/$sf in |
2721 |
if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then |
if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then |
2722 |
ignore_f=t |
ignore_f=t |
2723 |
else |
else |
2724 |
touch .links.tmp/$sf |
touch $TMP.links/$sf |
2725 |
deplist="$deplist $sf" |
deplist="$deplist $sf" |
2726 |
fi |
fi |
2727 |
;; |
;; |
2730 |
extn=`echo $sf | $AWK -F. '{print $NF}'` |
extn=`echo $sf | $AWK -F. '{print $NF}'` |
2731 |
case $extn in |
case $extn in |
2732 |
F) |
F) |
2733 |
echo " \\" >> F77srclist.tmp |
echo " \\" >> $TMP.F77srclist |
2734 |
printf " $sf" >> F77srclist.tmp |
printf " $sf" >> $TMP.F77srclist |
2735 |
if test "x$OPENAD" != x ; then |
if test "x$OPENAD" = x ; then |
2736 |
basename=${sf%%.F} |
basename=${sf%%.F} |
2737 |
isAD=`egrep ^$basename.f'[ ]*' adSrcFiles.tmp` |
isAD=`egrep ^$basename.f'[ ]*' $TMP.adSrcFiles` |
2738 |
|
if test -z "$isAD" ; then |
2739 |
|
echo " \\" >> $TMP.nonADF77srclist |
2740 |
|
printf " $sf" >> $TMP.nonADF77srclist |
2741 |
|
fi |
2742 |
|
else #- OpenAD case: |
2743 |
|
basename=${sf%%.F} |
2744 |
|
isAD=`egrep ^$basename.f'[ ]*' $TMP.adSrcFiles` |
2745 |
if test -z "$isAD" ; then |
if test -z "$isAD" ; then |
2746 |
toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE}` |
toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE}` |
2747 |
if test -z "$toBeIgnored" ; then |
if test -z "$toBeIgnored" ; then |
2748 |
echo " \\" >> nonADF77srclist.tmp |
echo " \\" >> $TMP.nonADF77srclist |
2749 |
printf " $sf" >> nonADF77srclist.tmp |
printf " $sf" >> $TMP.nonADF77srclist |
2750 |
else |
else |
2751 |
echo " not to be compiled : $sf" |
echo " not to be compiled : $sf" |
2752 |
fi |
fi |
2761 |
echo " original to be kept : $sf" |
echo " original to be kept : $sf" |
2762 |
fi |
fi |
2763 |
if test -n "$notToBeTransformed" -o -n "$untransformedVersionToBeKept" ; then |
if test -n "$notToBeTransformed" -o -n "$untransformedVersionToBeKept" ; then |
2764 |
echo " \\" >> nonADF77srclist.tmp |
echo " \\" >> $TMP.nonADF77srclist |
2765 |
printf " $sf" >> nonADF77srclist.tmp |
printf " $sf" >> $TMP.nonADF77srclist |
2766 |
fi |
fi |
2767 |
fi |
fi |
2768 |
fi |
fi |
2769 |
;; |
;; |
2770 |
F90) |
F90) |
2771 |
echo " \\" >> F90srclist.tmp |
echo " \\" >> $TMP.F90srclist |
2772 |
printf " $sf" >> F90srclist.tmp |
printf " $sf" >> $TMP.F90srclist |
2773 |
;; |
;; |
2774 |
c) |
c) |
2775 |
echo " \\" >> csrclist.tmp |
echo " \\" >> $TMP.csrclist |
2776 |
printf " $sf" >> csrclist.tmp |
printf " $sf" >> $TMP.csrclist |
2777 |
;; |
;; |
2778 |
h) |
h) |
2779 |
echo " \\" >> hsrclist.tmp |
echo " \\" >> $TMP.hsrclist |
2780 |
printf " $sf" >> hsrclist.tmp |
printf " $sf" >> $TMP.hsrclist |
2781 |
;; |
;; |
2782 |
flow) |
flow) |
2783 |
echo " \\" >> ad_flow_files.tmp |
echo " \\" >> $TMP.ad_flow_files |
2784 |
printf " $sf" >> ad_flow_files.tmp |
printf " $sf" >> $TMP.ad_flow_files |
2785 |
;; |
;; |
2786 |
esac |
esac |
2787 |
fi |
fi |
2790 |
done |
done |
2791 |
if test "x$deplist" != x ; then |
if test "x$deplist" != x ; then |
2792 |
if test "$d" != "." ; then |
if test "$d" != "." ; then |
2793 |
echo "" >> srclinks.tmp |
echo "" >> $TMP.srclinks |
2794 |
echo "# These files are linked from $d" >> srclinks.tmp |
echo "# These files are linked from $d" >> $TMP.srclinks |
2795 |
echo "$deplist :" >> srclinks.tmp |
echo "$deplist :" >> $TMP.srclinks |
2796 |
# We need to make sure that the link isn't already there. |
# We need to make sure that the link isn't already there. |
2797 |
# This may happen when make thinks that a header file has to be "remade" |
# This may happen when make thinks that a header file has to be "remade" |
2798 |
# because a module it depends on has changed. In this case we do nothing. |
# because a module it depends on has changed. In this case we do nothing. |
2799 |
printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> srclinks.tmp |
printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> $TMP.srclinks |
2800 |
fi |
fi |
2801 |
fi |
fi |
2802 |
done |
done |
2803 |
rm -rf .links.tmp |
rm -rf $TMP.links |
2804 |
echo "" >> F77srclist.tmp |
echo "" >> $TMP.F77srclist |
2805 |
echo "" >> nonADF77srclist.tmp |
echo "" >> $TMP.nonADF77srclist |
2806 |
echo "" >> csrclist.tmp |
echo "" >> $TMP.csrclist |
2807 |
echo "" >> F90srclist.tmp |
echo "" >> $TMP.F90srclist |
2808 |
echo "" >> hsrclist.tmp |
echo "" >> $TMP.hsrclist |
2809 |
echo "" >> ad_flow_files.tmp |
echo "" >> $TMP.ad_flow_files |
2810 |
|
|
2811 |
CMDLINE=$0 |
CMDLINE=$0 |
2812 |
for xx in "$@" ; do nw=`echo $xx | wc -w` |
for xx in "$@" ; do nw=`echo $xx | wc -w` |
2879 |
echo "EMBEDDED_FILES = " >>$MAKEFILE |
echo "EMBEDDED_FILES = " >>$MAKEFILE |
2880 |
fi |
fi |
2881 |
|
|
2882 |
|
# extract default cpp search path so we can pass it to makedepend |
2883 |
|
CPPINCLUDES=`cat /dev/null | $CPP -v 2>&1 | awk '/^End of search/{f=0}!/^\#/{if(f){printf " -I%s", $1;}}/^\#include "..." search start/{f=1}'` |
2884 |
|
|
2885 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
2886 |
# Unix ln (link) |
# Unix ln (link) |
2887 |
LN = ${LN} |
LN = ${LN} |
2902 |
DEFINES = ${DEFINES} |
DEFINES = ${DEFINES} |
2903 |
# Includes for CPP |
# Includes for CPP |
2904 |
INCLUDES = ${INCLUDES} |
INCLUDES = ${INCLUDES} |
2905 |
|
# default CPP includes for makedepend |
2906 |
|
CPPINCLUDES = ${CPPINCLUDES} |
2907 |
# Flags for KPP |
# Flags for KPP |
2908 |
KFLAGS1 = ${KFLAGS1} |
KFLAGS1 = ${KFLAGS1} |
2909 |
KFLAGS2 = ${KFLAGS2} |
KFLAGS2 = ${KFLAGS2} |
2928 |
|
|
2929 |
EOF |
EOF |
2930 |
|
|
2931 |
cat F77srclist.tmp >> $MAKEFILE |
cat $TMP.F77srclist >> $MAKEFILE |
2932 |
cat nonADF77srclist.tmp >> $MAKEFILE |
cat $TMP.nonADF77srclist >> $MAKEFILE |
2933 |
cat csrclist.tmp >> $MAKEFILE |
cat $TMP.csrclist >> $MAKEFILE |
2934 |
cat F90srclist.tmp >> $MAKEFILE |
cat $TMP.F90srclist >> $MAKEFILE |
2935 |
cat hsrclist.tmp >> $MAKEFILE |
cat $TMP.hsrclist >> $MAKEFILE |
2936 |
cat ad_flow_files.tmp >> $MAKEFILE |
cat $TMP.ad_flow_files >> $MAKEFILE |
2937 |
|
|
2938 |
rm -f F77srclist.tmp nonADF77srclist.tmp csrclist.tmp F90srclist.tmp hsrclist.tmp ad_flow_files.tmp |
rm -f $TMP.F77srclist $TMP.nonADF77srclist $TMP.csrclist $TMP.F90srclist $TMP.hsrclist $TMP.ad_flow_files |
2939 |
|
|
2940 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
2941 |
|
|
2969 |
|
|
2970 |
depend: |
depend: |
2971 |
@\$(MAKE) -f \$(MAKEFILE) links |
@\$(MAKE) -f \$(MAKEFILE) links |
2972 |
\$(MAKEDEPEND) -f \$(MAKEFILE) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES) |
\$(MAKEDEPEND) -f \$(MAKEFILE) -o .$FS \$(DEFINES) \$(INCLUDES) \$(CPPINCLUDES) \$(F77_SRC_FILES) |
2973 |
\$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE) |
\$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE) |
2974 |
-rm -f makedepend.out |
-rm -f makedepend.out |
2975 |
|
|
3002 |
@\$(MAKE) -f \$(MAKEFILE) cleanlinks |
@\$(MAKE) -f \$(MAKEFILE) cleanlinks |
3003 |
-rm -f \$(SPECIAL_FILES) f90mkdepend.log $MAKEFILE.old |
-rm -f \$(SPECIAL_FILES) f90mkdepend.log $MAKEFILE.old |
3004 |
-rm -f taf_command taf_output taf_ad.log taf_ad_flow.log taf_ftl.log |
-rm -f taf_command taf_output taf_ad.log taf_ad_flow.log taf_ftl.log |
|
-rm -f genmake_warnings genmake_errors make.log |
|
3005 |
|
|
3006 |
# remove also the executable, files that "genmake2" generates (except Makefile) |
# remove also the executable, files that "genmake2" generates (except Makefile) |
3007 |
# and output from a run (plus log files from testreport) |
# and output from a run (plus log files from testreport) |
3010 |
-rm -f \$(EXECUTABLE) \$(EXE_AD) \$(EXE_FTL) *.bak |
-rm -f \$(EXECUTABLE) \$(EXE_AD) \$(EXE_FTL) *.bak |
3011 |
-rm -f $LOGFILE genmake_state genmake_*optfile |
-rm -f $LOGFILE genmake_state genmake_*optfile |
3012 |
-rm -f SIZE.h.mpi genmake.tr_log make.tr_log |
-rm -f SIZE.h.mpi genmake.tr_log make.tr_log |
3013 |
|
-rm -rf mpi_headers mnc_test_* |
3014 |
-find \$(EXEDIR) -name "*.meta" -exec rm {} \; |
-find \$(EXEDIR) -name "*.meta" -exec rm {} \; |
3015 |
-find \$(EXEDIR) -name "*.data" -exec rm {} \; |
-find \$(EXEDIR) -name "*.data" -exec rm {} \; |
3016 |
-find \$(EXEDIR) -name "fort.*" -exec rm {} \; |
-find \$(EXEDIR) -name "fort.*" -exec rm {} \; |
3017 |
-rm -f *.txt STD* *diagnostics.log datetime |
-rm -f *.txt STDOUT.* STDERR.* *diagnostics.log *.[0-9][0-9][0-9][0-9].log |
3018 |
|
-rm -f datetime costfinal divided.ctrl snapshot* output_adm.txt.diva_* |
3019 |
-rm -f *_MIT_CE_000.opt0000 costfunction*0000 |
-rm -f *_MIT_CE_000.opt0000 costfunction*0000 |
3020 |
-rm -rf mnc_test_* |
-rm -f oad_cp.[0-9][0-9][0-9].????? |
3021 |
|
|
3022 |
makefile: |
makefile: |
3023 |
$THIS_SCRIPT $G2ARGS |
$THIS_SCRIPT $G2ARGS |
3070 |
## This nullifies any default implicit rules concerning these two file types: |
## This nullifies any default implicit rules concerning these two file types: |
3071 |
## %.o : %.F |
## %.o : %.F |
3072 |
|
|
3073 |
# C preprocessing and replacing the _d in constants: |
# C preprocessing and replacing the _d in constants: |
3074 |
CPPCMD = cat \$< | ${CPP} \$(DEFINES) \$(INCLUDES) | ${S64} |
CPPCMD = cat \$< | ${CPP} \$(DEFINES) \$(INCLUDES) | ${S64} |
3075 |
|
|
3076 |
.F.$FS: |
.F.$FS: |
3114 |
|
|
3115 |
TAF_EXTRA = ${TAF_EXTRA} |
TAF_EXTRA = ${TAF_EXTRA} |
3116 |
TAMC_EXTRA = ${TAMC_EXTRA} |
TAMC_EXTRA = ${TAMC_EXTRA} |
3117 |
|
LOCAL_MPI_HEADERS = ${LOCAL_MPI_HEADERS} |
3118 |
|
|
3119 |
EOF |
EOF |
3120 |
|
|
3132 |
echo " Add the source list for AD code generation" |
echo " Add the source list for AD code generation" |
3133 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
3134 |
printf "AD_FILES = " >> $MAKEFILE |
printf "AD_FILES = " >> $MAKEFILE |
3135 |
AD_FILES=`cat adSrcFiles.tmp` |
AD_FILES=`cat $TMP.adSrcFiles` |
3136 |
for i in $AD_FILES ; do |
for i in $AD_FILES ; do |
3137 |
echo " \\" >> $MAKEFILE |
echo " \\" >> $MAKEFILE |
3138 |
printf " $i" >> $MAKEFILE |
printf " $i" >> $MAKEFILE |
3139 |
done |
done |
3140 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
3141 |
rm -f adSrcFiles.tmp |
rm -f $TMP.adSrcFiles |
3142 |
|
|
3143 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
3144 |
|
|
3163 |
cat \$(FLOWFILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ad_input_code.$FS |
cat \$(FLOWFILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ad_input_code.$FS |
3164 |
|
|
3165 |
ad_taf_output.$FS: ad_input_code.$FS |
ad_taf_output.$FS: ad_input_code.$FS |
3166 |
|
@-rm -f ad_input_code_ad.$FS ; echo '' |
3167 |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
3168 |
ls -l ad_input_code_ad.$FS |
ls -l ad_input_code_ad.$FS |
3169 |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
3173 |
ls -l ad_input_code_ad.$FS |
ls -l ad_input_code_ad.$FS |
3174 |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
3175 |
|
|
3176 |
\$(EXE_AD): \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) ad_taf_output.o \$(OBJFILES) \$(EMBEDDED_FILES) |
\$(EXE_AD): \$(SPECIAL_FILES) \$(H_SRC_FILES) ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
3177 |
\$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS) |
\$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
3178 |
|
|
3179 |
ad_tamc_output.$FS: ad_input_code.$FS |
ad_tamc_output.$FS: ad_input_code.$FS |
3180 |
\$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS |
\$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS |
3189 |
adtrick: |
adtrick: |
3190 |
patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff |
patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff |
3191 |
|
|
3192 |
adobj: ad_taf_output.o \$(OBJFILES) |
adobj: ad_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) |
3193 |
|
|
3194 |
# ... FTL ... |
# ... FTL ... |
3195 |
ftlall: ftl_exe_target |
ftlall: ftl_exe_target |
3212 |
cat \$(AD_FLOW_FILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ftl_input_code.$FS |
cat \$(AD_FLOW_FILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ftl_input_code.$FS |
3213 |
|
|
3214 |
ftl_taf_output.$FS: ftl_input_code.$FS |
ftl_taf_output.$FS: ftl_input_code.$FS |
3215 |
|
@-rm -f ftl_input_code_tl.$FS ; echo '' |
3216 |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
3217 |
ls -l ftl_input_code_ftl.$FS |
ls -l ftl_input_code_tl.$FS |
3218 |
cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
cat ftl_input_code_tl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
3219 |
|
|
3220 |
ftltafonly: |
ftltafonly: |
3221 |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
3222 |
ls -l ftl_input_code_ftl.$FS |
ls -l ftl_input_code_tl.$FS |
3223 |
cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
cat ftl_input_code_tl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
3224 |
|
|
3225 |
\$(EXE_FTL): \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) ftl_taf_output.o \$(OBJFILES) \$(EMBEDDED_FILES) |
\$(EXE_FTL): \$(SPECIAL_FILES) \$(H_SRC_FILES) ftl_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(EMBEDDED_FILES) |
3226 |
\$(LINK) -o \${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS) |
\$(LINK) -o \${EXE_FTL} \$(FFLAGS) \$(FOPTIM) ftl_taf_output.o \$(NON_AD_F77_SRC_FILES:.F=.o) \$(F90_SRC_FILES:.F90=.o) \$(C_SRC_FILES:.c=.o) \$(LIBS) |
3227 |
|
|
3228 |
ftl_tamc_output.$FS: ftl_input_code.$FS |
ftl_tamc_output.$FS: ftl_input_code.$FS |
3229 |
\$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS |
\$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS |
3306 |
echo " \\" >> $MAKEFILE |
echo " \\" >> $MAKEFILE |
3307 |
printf " ${i}_mod.f$FS90" >> $MAKEFILE |
printf " ${i}_mod.f$FS90" >> $MAKEFILE |
3308 |
done |
done |
3309 |
AD_FILES=`cat adSrcFiles.tmp` |
AD_FILES=`cat $TMP.adSrcFiles` |
3310 |
for i in $AD_FILES ; do |
for i in $AD_FILES ; do |
3311 |
basename=${i%%.f} |
basename=${i%%.f} |
3312 |
toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE} ${OAD_DONT_TRANSFORM}` |
toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE} ${OAD_DONT_TRANSFORM}` |
3316 |
fi |
fi |
3317 |
done |
done |
3318 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
3319 |
rm -f adSrcFiles.tmp |
rm -f $TMP.adSrcFiles |
3320 |
|
|
3321 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
3322 |
|
|
3338 |
OAD_active.F90 \ |
OAD_active.F90 \ |
3339 |
OAD_cp.F90 \ |
OAD_cp.F90 \ |
3340 |
OAD_rev.F90 \ |
OAD_rev.F90 \ |
3341 |
OAD_tape.F90 |
OAD_tape.F90 \ |
3342 |
|
revolve.F90 |
3343 |
|
|
3344 |
OPENAD_SUPPORT_C_SRC_FILES = \ |
OPENAD_SUPPORT_C_SRC_FILES = \ |
3345 |
iaddr.c \ |
iaddr.c \ |
3422 |
ad_input_code_sf.pre.s2p.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.pre.s2p.xb.x2w.w2f.f$FS90 \${OADTOOLS}/insertTemplateDir.bash |
ad_input_code_sf.pre.s2p.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.pre.s2p.xb.x2w.w2f.f$FS90 \${OADTOOLS}/insertTemplateDir.bash |
3423 |
\${OADTOOLS}/insertTemplateDir.bash \$< \$@ |
\${OADTOOLS}/insertTemplateDir.bash \$< \$@ |
3424 |
|
|
3425 |
PPEXTRAS=\$(wildcard \${OADTOOLS}/ad_template.*.F) \${OADTOOLS}/ad_inline.F |
PPEXTRAS=\$(notdir \$(wildcard \${OADTOOLS}/ad_template.*.F)) ad_inline.F |
3426 |
# postprocess F' |
# postprocess F' |
3427 |
postProcess.tag: ad_input_code_sf.pre.s2p.xb.x2w.w2f.td.f$FS90 \$(PPEXTRAS:.F=.f) | w2f__types.f90 |
postProcess.tag: ad_input_code_sf.pre.s2p.xb.x2w.w2f.td.f$FS90 \$(PPEXTRAS:.F=.f) | w2f__types.f90 |
3428 |
\${OPENADFORTTK_BASE}/tools/SourceProcessing/postProcess.py --progress --timing --infoUnitFile w2f__types.f90 --outputFormat=fixed --separateOutput --pathSuffix "" --filenameSuffix "_oad" -m r -i \${OADTOOLS}/ad_inline.f \$< |
\${OPENADFORTTK_BASE}/tools/SourceProcessing/postProcess.py --progress --timing --infoUnitFile w2f__types.f90 --outputFormat=fixed --separateOutput --pathSuffix "" --filenameSuffix "_oad" -m r -i ad_inline.f \$< |
3429 |
# the target is a placeholder to trigger a single execution of the rule |
# the target is a placeholder to trigger a single execution of the rule |
3430 |
touch \$@ |
touch \$@ |
3431 |
# put this so make knows about the postprocessing output |
# put this so make knows about the postprocessing output |
3436 |
\$(LN) \${XAIFSCHEMAROOT}/schema/\$@ . |
\$(LN) \${XAIFSCHEMAROOT}/schema/\$@ . |
3437 |
|
|
3438 |
# link the support files: |
# link the support files: |
3439 |
\$(OPENAD_SUPPORT_F90_SRC_FILES) \$(OPENAD_SUPPORT_C_SRC_FILES): |
\$(OPENAD_SUPPORT_F90_SRC_FILES) \$(OPENAD_SUPPORT_C_SRC_FILES) \$(PPEXTRAS): |
3440 |
\$(LN) \${OADTOOLS}/\$@ . |
\$(LN) \${OADTOOLS}/\$@ . |
3441 |
|
|
3442 |
AD_CLEAN += *_mod.h *_mod.F90 *.FF90 *.mod-whirl temp.sed oad_cp.* postProcess.tag oadtempflile \$(PPEXTRAS:.F=.f) |
AD_CLEAN += *_mod.h *_mod.F90 *.FF90 *.mod-whirl temp.sed oad_cp.* postProcess.tag |
3443 |
|
|
3444 |
# ============ end OpenAD specific section ============== |
# ============ end OpenAD specific section ============== |
3445 |
|
|
3475 |
done |
done |
3476 |
|
|
3477 |
echo " Add rules for links" |
echo " Add rules for links" |
3478 |
cat srclinks.tmp >> $MAKEFILE |
cat $TMP.srclinks >> $MAKEFILE |
3479 |
rm -f srclinks.tmp |
rm -f $TMP.srclinks |
3480 |
|
|
3481 |
echo " Adding makedepend marker" |
echo " Adding makedepend marker" |
3482 |
printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE |
printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE |