480 |
# strip the comments and then convert the dependency file into |
# strip the comments and then convert the dependency file into |
481 |
# two arrays: PNAME, DNAME |
# two arrays: PNAME, DNAME |
482 |
cat $1 | sed -e 's/#.*$//g' \ |
cat $1 | sed -e 's/#.*$//g' \ |
483 |
| $AWK 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \ |
| $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \ |
484 |
> ./.pd_tmp |
> ./.pd_tmp |
485 |
|
RETVAL=$? |
486 |
|
if test ! "x${RETVAL}" = x0 ; then |
487 |
|
echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$1\"" |
488 |
|
exit 1 |
489 |
|
fi |
490 |
. ./.pd_tmp |
. ./.pd_tmp |
491 |
rm -f ./.pd_tmp |
rm -f ./.pd_tmp |
492 |
|
|
|
printf "PNAME = "${} |
|
493 |
} |
} |
494 |
|
|
495 |
|
|
523 |
-pdefault=NAME | --pdefault=NAME |
-pdefault=NAME | --pdefault=NAME |
524 |
Get the default package list from "NAME". |
Get the default package list from "NAME". |
525 |
|
|
526 |
|
-bash NAME |
527 |
|
Explicitly specify the Bourne or BASH shell to use |
528 |
|
|
529 |
-make NAME | -m NAME |
-make NAME | -m NAME |
530 |
--make=NAME | -m=NAME |
--make=NAME | -m=NAME |
531 |
Use "NAME" for the MAKE program. The default is "make" but |
Use "NAME" for the MAKE program. The default is "make" but |
585 |
*only* works if it is supported by the OPTFILE that |
*only* works if it is supported by the OPTFILE that |
586 |
is being used. |
is being used. |
587 |
|
|
588 |
|
-use_real4 | -use_r4 | -ur4 | --use_real4 | --use_r4 | --ur4 |
589 |
|
Use "real*4" type for _RS variable (#undef REAL4_IS_SLOW) |
590 |
|
*only* works if CPP_EEOPTIONS.h allows this. |
591 |
|
|
592 |
-ignoretime | -ignore_time | --ignoretime | --ignore_time |
-ignoretime | -ignore_time | --ignoretime | --ignore_time |
593 |
Ignore all the "wall clock" routines entirely. This will |
Ignore all the "wall clock" routines entirely. This will |
594 |
not in any way hurt the model results -- it simply means |
not in any way hurt the model results -- it simply means |
622 |
set to PATH. i.e. Include files from \$PATH/include, link to libraries |
set to PATH. i.e. Include files from \$PATH/include, link to libraries |
623 |
from \$PATH/lib and use binaries from \$PATH/bin. |
from \$PATH/lib and use binaries from \$PATH/bin. |
624 |
|
|
625 |
|
-omp | --omp |
626 |
|
Activate OpenMP code + use Compiler option OMPFLAG |
627 |
|
-omp=OMPFLAG | --omp=OMPFLAG |
628 |
|
Activate OpenMP code + use Compiler option OMPFLAG |
629 |
|
|
630 |
-es | --es | -embed-source | --embed-source |
-es | --es | -embed-source | --embed-source |
631 |
Embed a tarball containing the full source code |
Embed a tarball containing the full source code |
632 |
(including the Makefile, etc.) used to build the |
(including the Makefile, etc.) used to build the |
633 |
executable [off by default] |
executable [off by default] |
634 |
|
|
|
-bash NAME |
|
|
Explicitly specify the Bourne or BASH shell to use |
|
|
|
|
635 |
While it is most often a single word, the "NAME" variables specified |
While it is most often a single word, the "NAME" variables specified |
636 |
above can in many cases be a space-delimited string such as: |
above can in many cases be a space-delimited string such as: |
637 |
|
|
643 |
|
|
644 |
For more detailed genmake documentation, please see: |
For more detailed genmake documentation, please see: |
645 |
|
|
646 |
http://mitgcm.org/devel_HOWTO/ |
http://mitgcm.org/public/devel_HOWTO/ |
647 |
|
|
648 |
EOF |
EOF |
649 |
|
|
1059 |
FFLAGS= |
FFLAGS= |
1060 |
FOPTIM= |
FOPTIM= |
1061 |
FEXTRAFLAGS= |
FEXTRAFLAGS= |
1062 |
|
USE_EXTENDED_SRC= |
1063 |
|
EXTENDED_SRC_FLAG= |
1064 |
CFLAGS= |
CFLAGS= |
1065 |
KFLAGS1= |
KFLAGS1= |
1066 |
KFLAGS2= |
KFLAGS2= |
1071 |
NOOPTFLAGS= |
NOOPTFLAGS= |
1072 |
MPI= |
MPI= |
1073 |
MPIPATH= |
MPIPATH= |
1074 |
|
OMP= |
1075 |
|
OMPFLAG= |
1076 |
|
USE_R4= |
1077 |
TS= |
TS= |
1078 |
PAPIS= |
PAPIS= |
1079 |
PCLS= |
PCLS= |
1141 |
|
|
1142 |
# The following state can be set directly by command-line switches |
# The following state can be set directly by command-line switches |
1143 |
gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE" |
gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE" |
1144 |
gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL DEVEL MPI JAM DUMPSTATE STANDARDDIRS" |
gm_s2="FC IEEE USE_R4 TS PAPIS PCLS PAPI PCL HPMT GSL DEVEL MPI OMP DUMPSTATE STANDARDDIRS" |
1145 |
|
|
1146 |
# The following state is not directly set by command-line switches |
# The following state is not directly set by command-line switches |
1147 |
gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM FEXTRAFLAGS" |
gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM FEXTRAFLAGS" |
1182 |
fi |
fi |
1183 |
|
|
1184 |
#echo "$0::$1:$2:$3:$4:$5:$6:$7:" |
#echo "$0::$1:$2:$3:$4:$5:$6:$7:" |
|
#OPTIONS= |
|
|
#n=0 |
|
|
#for i ; do |
|
|
# echo "$i $n" |
|
|
# setvar="OPTIONS[$n]='$i'" |
|
|
# # echo " $setvar" |
|
|
# eval "$setvar" |
|
|
# n=$(( $n + 1 )) |
|
|
#done |
|
1185 |
#parse_options |
#parse_options |
1186 |
ac_prev= |
ac_prev= |
1187 |
for ac_option in "$@" ; do |
for ac_option in "$@" ; do |
1306 |
-noieee | --noieee) |
-noieee | --noieee) |
1307 |
IEEE= ;; |
IEEE= ;; |
1308 |
|
|
1309 |
|
-use_real4 | -use_r4 | -ur4 | --use_real4 | --use_r4 | --ur4 ) |
1310 |
|
USE_R4=true ;; |
1311 |
|
|
1312 |
-ts | --ts) |
-ts | --ts) |
1313 |
TS=true ;; |
TS=true ;; |
1314 |
-papis | --papis) |
-papis | --papis) |
1336 |
MPIPATH=$ac_optarg |
MPIPATH=$ac_optarg |
1337 |
MPI=true ;; |
MPI=true ;; |
1338 |
|
|
1339 |
# -jam | --jam) |
-omp | --omp) |
1340 |
# JAM=1 ;; |
OMP=true ;; |
1341 |
# -nojam | --nojam) |
-omp=* | --omp=*) |
1342 |
# JAM=0 ;; |
OMPFLAG=$ac_optarg |
1343 |
|
OMP=true ;; |
1344 |
|
|
1345 |
-ds | --ds) |
-ds | --ds) |
1346 |
DUMPSTATE=t ;; |
DUMPSTATE=t ;; |
1415 |
fi |
fi |
1416 |
|
|
1417 |
# Find the MITgcm ${THISVER} |
# Find the MITgcm ${THISVER} |
1418 |
if test -f "${ROOTDIR}/doc/tag-index" ; then |
version_file="${ROOTDIR}/doc/tag-index" |
1419 |
THISVER=`grep '^checkpoint' ${ROOTDIR}/doc/tag-index | head -1` |
if test -f $version_file ; then |
1420 |
|
THISVER=`$AWK '/^checkpoint/{print $1; exit}' $version_file` |
1421 |
|
#- remove ./BUILD_INFO.h file if older than version_file |
1422 |
|
if test -f ./BUILD_INFO.h -a ./BUILD_INFO.h -ot $version_file ; then |
1423 |
|
echo " remove ./BUILD_INFO.h (older than ${version_file})" |
1424 |
|
rm -f ./BUILD_INFO.h |
1425 |
|
fi |
1426 |
fi |
fi |
1427 |
|
|
1428 |
if test "x$MAKEFILE" = x ; then |
if test "x$MAKEFILE" = x ; then |
1578 |
echo " Turning on MPI cpp macros" |
echo " Turning on MPI cpp macros" |
1579 |
DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI" |
DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI" |
1580 |
fi |
fi |
1581 |
|
if test ! "x$OMP" = x ; then |
1582 |
|
echo " Add OMPFLAG and turn on OpenMP cpp macros" |
1583 |
|
FFLAGS="$FFLAGS $OMPFLAG" |
1584 |
|
F90FLAGS="$F90FLAGS $OMPFLAG" |
1585 |
|
DEFINES="$DEFINES -DUSE_OMP_THREADING" |
1586 |
|
fi |
1587 |
|
|
1588 |
|
if test ! "x$USE_R4" = x ; then |
1589 |
|
echo " Turning on LET_RS_BE_REAL4 cpp flag" |
1590 |
|
DEFINES="$DEFINES -DLET_RS_BE_REAL4" |
1591 |
|
fi |
1592 |
|
|
1593 |
if test ! "x$TS" = x ; then |
if test ! "x$TS" = x ; then |
1594 |
echo " Turning on timing per timestep" |
echo " Turning on timing per timestep" |
1670 |
INCLUDES="$INCLUDES $GSLINC" |
INCLUDES="$INCLUDES $GSLINC" |
1671 |
LIBS="$LIBS $GSLLIB" |
LIBS="$LIBS $GSLLIB" |
1672 |
fi |
fi |
1673 |
|
#- if USE_EXTENDED_SRC is set, add EXTENDED_SRC_FLAG to FFLAGS : |
1674 |
|
if test ! "x$USE_EXTENDED_SRC" = x ; then |
1675 |
|
FFLAGS="$FFLAGS $EXTENDED_SRC_FLAG" |
1676 |
|
F90FIXEDFORMAT="$F90FIXEDFORMAT $EXTENDED_SRC_FLAG" |
1677 |
|
fi |
1678 |
|
|
1679 |
printf "\n=== Checking system libraries ===\n" |
printf "\n=== Checking system libraries ===\n" |
1680 |
printf " Do we have the system() command using $FC... " |
printf " Do we have the system() command using $FC... " |
1797 |
|
|
1798 |
|
|
1799 |
printf "\n=== Setting defaults ===\n" |
printf "\n=== Setting defaults ===\n" |
1800 |
printf " Adding MODS directories: " |
printf " Adding MODS directories: " |
1801 |
for d in $MODS ; do |
for d in $MODS ; do |
1802 |
if test ! -d $d ; then |
if test ! -d $d ; then |
1803 |
echo |
echo |
1804 |
echo "Error: MODS directory \"$d\" not found!" |
echo "Error: MODS directory \"$d\" not found!" |
1805 |
exit 1 |
exit 1 |
1806 |
else |
else |
1807 |
printf " $d" |
printf "$d " |
1808 |
SOURCEDIRS="$SOURCEDIRS $d" |
SOURCEDIRS="$SOURCEDIRS $d" |
1809 |
INCLUDEDIRS="$INCLUDEDIRS $d" |
INCLUDEDIRS="$INCLUDEDIRS $d" |
1810 |
fi |
fi |
1865 |
|
|
1866 |
EXECUTABLE=${EXECUTABLE:-mitgcmuv} |
EXECUTABLE=${EXECUTABLE:-mitgcmuv} |
1867 |
|
|
1868 |
|
# Set Standard Code Directories: |
1869 |
|
if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then |
1870 |
|
STANDARDDIRS="eesupp model" |
1871 |
|
fi |
1872 |
|
# if model in Standard-Code-Dir, add eesupp (needed to compile model) |
1873 |
|
echo " $STANDARDDIRS " | grep ' model ' > /dev/null 2>&1 |
1874 |
|
ckM=$? |
1875 |
|
echo " $STANDARDDIRS " | grep ' eesupp ' > /dev/null 2>&1 |
1876 |
|
ckE=$? |
1877 |
|
if test $ckM = 0 -a $ckE = 1 ; then |
1878 |
|
STANDARDDIRS="$STANDARDDIRS eesupp" |
1879 |
|
fi |
1880 |
|
|
1881 |
# We have a special set of source files in eesupp/src which are |
# We have a special set of source files in eesupp/src which are |
1882 |
# generated from some template source files. We'll make them first so |
# generated from some template source files. We'll make them first so |
1883 |
# they appear as regular source code |
# they appear as regular source code |
1928 |
echo " getting package dependency info from $PDEPEND" |
echo " getting package dependency info from $PDEPEND" |
1929 |
# Strip the comments and then convert the dependency file into |
# Strip the comments and then convert the dependency file into |
1930 |
# two arrays: PNAME, DNAME |
# two arrays: PNAME, DNAME |
1931 |
cat $PDEPEND | sed -e 's/#.*$//g' \ |
get_pdepend_list $PDEPEND |
|
| $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \ |
|
|
> ./.pd_tmp |
|
|
RETVAL=$? |
|
|
if test ! "x${RETVAL}" = x0 ; then |
|
|
echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\"" |
|
|
exit 1 |
|
|
fi |
|
|
. ./.pd_tmp |
|
|
rm -f ./.pd_tmp |
|
1932 |
|
|
1933 |
# Search for default packages. Note that a "$ROOTDIR/pkg/pkg_groups" |
# Search for default packages. Note that a "$ROOTDIR/pkg/pkg_groups" |
1934 |
# file should eventually be added so that, for convenience, one can |
# file has been added so that, for convenience, one can specify |
1935 |
# specify groups of packages using names like "ocean" and "atmosphere". |
# groups of packages using names like "ocean" and "atmosphere". |
1936 |
echo " checking default package list: " |
echo " checking default package list: " |
1937 |
if test "x${PDEFAULT}" = x ; then |
if test "x${PDEFAULT}" = x ; then |
1938 |
for i in "." $MODS ; do |
for i in "." $MODS ; do |
1963 |
for i in $def ; do |
for i in $def ; do |
1964 |
PACKAGES="$PACKAGES $i" |
PACKAGES="$PACKAGES $i" |
1965 |
done |
done |
1966 |
echo " before group expansion packages are: $PACKAGES" |
echo " before group expansion packages are:$PACKAGES" |
1967 |
RET=1 |
RET=1 |
1968 |
while test $RET = 1 ; do expand_pkg_groups; RET=$?; done |
while test $RET = 1 ; do expand_pkg_groups; RET=$?; done |
1969 |
echo " after group expansion packages are: $PACKAGES" |
echo " after group expansion packages are: $PACKAGES" |
1970 |
fi |
fi |
1971 |
fi |
fi |
1972 |
|
|
1973 |
echo " applying DISABLE settings" |
echo " applying DISABLE settings" |
1974 |
|
echo "" > ./.tmp_pack |
1975 |
for i in $PACKAGES ; do |
for i in $PACKAGES ; do |
1976 |
echo $i >> ./.tmp_pack |
echo $i >> ./.tmp_pack |
1977 |
done |
done |
2009 |
PACKAGES="$PACKAGES $i" |
PACKAGES="$PACKAGES $i" |
2010 |
done |
done |
2011 |
rm -f ./.tmp_pack |
rm -f ./.tmp_pack |
2012 |
echo " packages are: $PACKAGES" |
echo " packages are: $PACKAGES" |
2013 |
|
|
2014 |
# Check for package MNC: if NetCDF is available, then build the MNC |
# Check for package MNC: if NetCDF is available, then build the MNC |
2015 |
# template files ; otherwise, delete mnc from the list of packages. |
# template files ; otherwise, delete mnc from the list of packages. |
2016 |
echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1 |
echo " $PACKAGES " | grep ' mnc ' > /dev/null 2>&1 |
2017 |
RETVAL=$? |
RETVAL=$? |
2018 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
2019 |
if test "x$HAVE_NETCDF" != xt ; then |
if test "x$HAVE_NETCDF" != xt ; then |
2048 |
|
|
2049 |
# Check for package PROFILES: if NetCDF is not available, |
# Check for package PROFILES: if NetCDF is not available, |
2050 |
# then delete profiles from the list of available packages. |
# then delete profiles from the list of available packages. |
2051 |
echo $PACKAGES | grep ' profiles ' > /dev/null 2>&1 |
echo " $PACKAGES " | grep ' profiles ' > /dev/null 2>&1 |
2052 |
RETVAL=$? |
RETVAL=$? |
2053 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
2054 |
if test "x$HAVE_NETCDF" != xt ; then |
if test "x$HAVE_NETCDF" != xt ; then |
2089 |
pin="t" |
pin="t" |
2090 |
fi |
fi |
2091 |
done |
done |
2092 |
|
# or in the current $STANDARDDIRS list? |
2093 |
|
for p in $STANDARDDIRS ; do |
2094 |
|
if test "x$p" = "x$pname" ; then pin="t" ; fi |
2095 |
|
done |
2096 |
|
|
2097 |
# Is the DNAME entry a (+) or (-) rule ? |
# Is the DNAME entry a (+) or (-) rule ? |
2098 |
tmp="dname=\"\$DNAME_$i\"" |
tmp="dname=\"\$DNAME_$i\"" |
2145 |
done |
done |
2146 |
ck=$ck"t" |
ck=$ck"t" |
2147 |
done |
done |
2148 |
echo " packages are: $PACKAGES" |
echo " packages are: $PACKAGES" |
2149 |
for i in $PACKAGES ; do |
for i in $PACKAGES ; do |
2150 |
adr="$ROOTDIR/pkg/$i" |
adr="$ROOTDIR/pkg/$i" |
2151 |
if test -d $adr ; then |
if test -d $adr ; then |
2201 |
|
|
2202 |
done |
done |
2203 |
|
|
2204 |
echo " Adding STANDARDDIRS" |
echo " Adding STANDARDDIRS='$STANDARDDIRS'" |
2205 |
BUILDDIR=${BUILDDIR:-.} |
BUILDDIR=${BUILDDIR:-.} |
|
if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then |
|
|
STANDARDDIRS="eesupp model" |
|
|
fi |
|
2206 |
if test "x$STANDARDDIRS" != x ; then |
if test "x$STANDARDDIRS" != x ; then |
2207 |
for d in $STANDARDDIRS ; do |
for d in $STANDARDDIRS ; do |
2208 |
adr="$ROOTDIR/$d/src" |
adr="$ROOTDIR/$d/src" |
2257 |
|
|
2258 |
# Here, we build the list of files to be "run through" the adjoint |
# Here, we build the list of files to be "run through" the adjoint |
2259 |
# compiler. |
# compiler. |
2260 |
if test -f ./ad_files ; then |
if test -f ./adSrcFiles.tmp ; then |
2261 |
rm -f ./ad_files |
rm -f ./adSrcFiles.tmp |
2262 |
fi |
fi |
2263 |
echo " Creating the list of files for the adjoint compiler." |
echo " Creating the list of files for the adjoint compiler." |
2264 |
for i in $SOURCEDIRS ; do |
for i in $SOURCEDIRS ; do |
2265 |
list_files=`( cd $i && ls -1 *.list 2>/dev/null )` |
list_files=`( cd $i && ls -1 *.list 2>/dev/null )` |
2266 |
for j in $list_files ; do |
for j in $list_files ; do |
2267 |
cat $i/$j >> ad_files |
cat $i/$j >> adSrcFiles.tmp |
2268 |
done |
done |
2269 |
done |
done |
2270 |
if test ! "x"$FS = "x.f" ; then |
if test ! "x"$FS = "x.f" ; then |
2271 |
cat ad_files | sed -e "s/\.f/.$FS/g" > ad_files_f |
cat adSrcFiles.tmp | sed -e "s/\.f/.$FS/g" > adSrcFiles.tmp_f |
2272 |
mv -f ad_files_f ad_files |
mv -f adSrcFiles.tmp_f adSrcFiles.tmp |
2273 |
fi |
fi |
2274 |
|
|
2275 |
echo |
echo |
2327 |
exit 1 |
exit 1 |
2328 |
fi |
fi |
2329 |
rm -f .links.tmp/foo |
rm -f .links.tmp/foo |
2330 |
|
|
2331 |
|
if test "x$OPENAD" != x ; then |
2332 |
|
OAD_DONT_COMPILE="/dev/null" |
2333 |
|
OAD_DONT_TRANSFORM="/dev/null" |
2334 |
|
OAD_KEEP_ORIGINAL="/dev/null" |
2335 |
|
OAD_CB2M_FILES="/dev/null" |
2336 |
|
echo " looking for dontCompile file: " |
2337 |
|
for i in "." $MODS ; do |
2338 |
|
if test -r $i"/dontCompile" ; then |
2339 |
|
OAD_DONT_COMPILE=$i"/dontCompile" |
2340 |
|
echo " found $OAD_DONT_COMPILE" |
2341 |
|
break |
2342 |
|
fi |
2343 |
|
done |
2344 |
|
echo " looking for dontTransform file: " |
2345 |
|
for i in "." $MODS ; do |
2346 |
|
if test -r $i"/dontTransform" ; then |
2347 |
|
OAD_DONT_TRANSFORM=$i"/dontTransform" |
2348 |
|
echo " found $OAD_DONT_TRANSFORM" |
2349 |
|
break |
2350 |
|
fi |
2351 |
|
done |
2352 |
|
echo " looking for keepOriginal file: " |
2353 |
|
for i in "." $MODS ; do |
2354 |
|
if test -r $i"/keepOriginal" ; then |
2355 |
|
OAD_KEEP_ORIGINAL=$i"/keepOriginal" |
2356 |
|
echo " found $OAD_KEEP_ORIGINAL" |
2357 |
|
break |
2358 |
|
fi |
2359 |
|
done |
2360 |
|
echo " looking for cb2mFiles: " |
2361 |
|
for i in "." $MODS ; do |
2362 |
|
if test -r $i"/cb2mFiles" ; then |
2363 |
|
OAD_CB2M_FILES=$i"/cb2mFiles" |
2364 |
|
echo " found $OAD_CB2M_FILES" |
2365 |
|
break |
2366 |
|
fi |
2367 |
|
done |
2368 |
|
echo " OpenAD exceptions: " |
2369 |
|
fi |
2370 |
|
|
2371 |
echo "# This section creates symbolic links" > srclinks.tmp |
echo "# This section creates symbolic links" > srclinks.tmp |
2372 |
echo "" >> srclinks.tmp |
echo "" >> srclinks.tmp |
2373 |
printf 'SRCFILES = ' > srclist.inc |
printf 'F77_SRC_FILES = ' > F77srclist.tmp |
2374 |
printf 'CSRCFILES = ' > csrclist.inc |
printf 'NON_AD_F77_SRC_FILES = ' > nonADF77srclist.tmp |
2375 |
printf 'F90SRCFILES = ' > f90srclist.inc |
printf 'C_SRC_FILES = ' > csrclist.tmp |
2376 |
printf 'HEADERFILES = ' > hlist.inc |
printf 'F90_SRC_FILES = ' > F90srclist.tmp |
2377 |
printf 'AD_FLOW_FILES = ' > ad_flow_files.inc |
printf 'H_SRC_FILES = ' > hsrclist.tmp |
2378 |
|
printf 'AD_FLOW_FILES = ' > ad_flow_files.tmp |
2379 |
alldirs="$SOURCEDIRS $INCLUDEDIRS ." |
alldirs="$SOURCEDIRS $INCLUDEDIRS ." |
2380 |
for d in $alldirs ; do |
for d in $alldirs ; do |
2381 |
deplist= |
deplist= |
2382 |
sfiles=`( cd $d; echo *.[h,c,F] *.flow )` |
sfiles=`( cd $d; echo *.[h,c,F] *.flow )` |
2383 |
sfiles=`( echo $sfiles; cd $d; echo *.F90 )` |
sfiles=`( echo $sfiles; cd $d; echo *.F90 )` |
2384 |
|
if test "x$OPENAD" != x ; then |
2385 |
|
sfiles=`( echo $sfiles | grep -v _cb2m\. )` |
2386 |
|
fi |
2387 |
for sf in $sfiles ; do |
for sf in $sfiles ; do |
2388 |
if test ! -r ".links.tmp/$sf" ; then |
if test ! -r ".links.tmp/$sf" ; then |
2389 |
if test -f "$d/$sf" ; then |
if test -f "$d/$sf" ; then |
2418 |
if test "x$ignore_f" = xf ; then |
if test "x$ignore_f" = xf ; then |
2419 |
extn=`echo $sf | $AWK -F. '{print $NF}'` |
extn=`echo $sf | $AWK -F. '{print $NF}'` |
2420 |
case $extn in |
case $extn in |
2421 |
F) |
F) |
2422 |
echo " \\" >> srclist.inc |
echo " \\" >> F77srclist.tmp |
2423 |
printf " $sf" >> srclist.inc |
printf " $sf" >> F77srclist.tmp |
2424 |
;; |
if test "x$OPENAD" != x ; then |
2425 |
F90) |
basename=${sf%%.F} |
2426 |
echo " \\" >> f90srclist.inc |
isAD=`egrep ^$basename.f'[ ]*' adSrcFiles.tmp` |
2427 |
printf " $sf" >> f90srclist.inc |
if test -z "$isAD" ; then |
2428 |
;; |
toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE}` |
2429 |
c) |
if test -z "$toBeIgnored" ; then |
2430 |
echo " \\" >> csrclist.inc |
echo " \\" >> nonADF77srclist.tmp |
2431 |
printf " $sf" >> csrclist.inc |
printf " $sf" >> nonADF77srclist.tmp |
2432 |
;; |
else |
2433 |
h) |
echo " not to be compiled : $sf" |
2434 |
echo " \\" >> hlist.inc |
fi |
2435 |
printf " $sf" >> hlist.inc |
else # file is initially listed as an AD file we want to exclude it |
2436 |
;; |
# or we want to retain the untransformed version |
2437 |
flow) |
notToBeTransformed=`egrep ^$basename'[ ]*' ${OAD_DONT_TRANSFORM}` |
2438 |
echo " \\" >> ad_flow_files.inc |
untransformedVersionToBeKept=`egrep ^$basename'[ ]*' ${OAD_KEEP_ORIGINAL}` |
2439 |
printf " $sf" >> ad_flow_files.inc |
if test -n "$notToBeTransformed"; then |
2440 |
;; |
echo " not to be transformed: $sf" |
2441 |
esac |
fi |
2442 |
fi |
if test -n "$untransformedVersionToBeKept" ; then |
2443 |
|
echo " original to be kept : $sf" |
2444 |
|
fi |
2445 |
|
if test -n "$notToBeTransformed" -o -n "$untransformedVersionToBeKept" ; then |
2446 |
|
echo " \\" >> nonADF77srclist.tmp |
2447 |
|
printf " $sf" >> nonADF77srclist.tmp |
2448 |
|
fi |
2449 |
|
fi |
2450 |
|
fi |
2451 |
|
;; |
2452 |
|
F90) |
2453 |
|
echo " \\" >> F90srclist.tmp |
2454 |
|
printf " $sf" >> F90srclist.tmp |
2455 |
|
;; |
2456 |
|
c) |
2457 |
|
echo " \\" >> csrclist.tmp |
2458 |
|
printf " $sf" >> csrclist.tmp |
2459 |
|
;; |
2460 |
|
h) |
2461 |
|
echo " \\" >> hsrclist.tmp |
2462 |
|
printf " $sf" >> hsrclist.tmp |
2463 |
|
;; |
2464 |
|
flow) |
2465 |
|
echo " \\" >> ad_flow_files.tmp |
2466 |
|
printf " $sf" >> ad_flow_files.tmp |
2467 |
|
;; |
2468 |
|
esac |
2469 |
|
fi |
2470 |
fi |
fi |
2471 |
fi |
fi |
2472 |
done |
done |
2473 |
if test "x$deplist" != x ; then |
if test "x$deplist" != x ; then |
2474 |
echo "" >> srclinks.tmp |
if test "$d" != "." ; then |
2475 |
|
echo "" >> srclinks.tmp |
2476 |
echo "# These files are linked from $d" >> srclinks.tmp |
echo "# These files are linked from $d" >> srclinks.tmp |
2477 |
echo "$deplist :" >> srclinks.tmp |
echo "$deplist :" >> srclinks.tmp |
2478 |
# We need to make sure that the link isn't already there. |
# We need to make sure that the link isn't already there. |
2479 |
# This may happen when make thinks that a header file has to be "remade" |
# This may happen when make thinks that a header file has to be "remade" |
2480 |
# because a module it depends on has changed. In this case we do nothing. |
# because a module it depends on has changed. In this case we do nothing. |
2481 |
printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> srclinks.tmp |
printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> srclinks.tmp |
2482 |
|
fi |
2483 |
fi |
fi |
2484 |
done |
done |
2485 |
rm -rf .links.tmp |
rm -rf .links.tmp |
2486 |
echo "" >> srclist.inc |
echo "" >> F77srclist.tmp |
2487 |
echo "" >> csrclist.inc |
echo "" >> nonADF77srclist.tmp |
2488 |
echo "" >> f90srclist.inc |
echo "" >> csrclist.tmp |
2489 |
echo "" >> hlist.inc |
echo "" >> F90srclist.tmp |
2490 |
echo "" >> ad_flow_files.inc |
echo "" >> hsrclist.tmp |
2491 |
|
echo "" >> ad_flow_files.tmp |
2492 |
|
|
2493 |
|
CMDLINE=$0 |
2494 |
|
for xx in "$@" ; do nw=`echo $xx | wc -w` |
2495 |
|
if test $nw = '1' ; then CMDLINE="$CMDLINE $xx" |
2496 |
|
else CMDLINE="$CMDLINE '$xx'" ; fi |
2497 |
|
done |
2498 |
|
|
2499 |
if test -f $MAKEFILE ; then |
if test -f $MAKEFILE ; then |
2500 |
mv -f $MAKEFILE "$MAKEFILE.bak" |
mv -f $MAKEFILE "$MAKEFILE.old" |
2501 |
fi |
fi |
2502 |
echo " Writing makefile: $MAKEFILE" |
echo " Writing makefile: $MAKEFILE" |
2503 |
echo "# Multithreaded + multi-processing makefile for:" > $MAKEFILE |
echo "# Multithreaded + multi-processing makefile for:" > $MAKEFILE |
2505 |
echo "# This makefile was generated automatically on" >> $MAKEFILE |
echo "# This makefile was generated automatically on" >> $MAKEFILE |
2506 |
echo "# $THISDATE" >> $MAKEFILE |
echo "# $THISDATE" >> $MAKEFILE |
2507 |
echo "# by the command:" >> $MAKEFILE |
echo "# by the command:" >> $MAKEFILE |
2508 |
echo "# $0 $G2ARGS" >> $MAKEFILE |
echo "# $CMDLINE" >> $MAKEFILE |
2509 |
echo "# executed by:" >> $MAKEFILE |
echo "# executed by:" >> $MAKEFILE |
2510 |
echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE |
echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE |
2511 |
|
|
2516 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
2517 |
# |
# |
2518 |
# OPTFILE="$OPTFILE" |
# OPTFILE="$OPTFILE" |
2519 |
# |
# |
2520 |
# BUILDDIR : Directory where object files are written |
# BUILDDIR : Directory where object files are written |
2521 |
# SOURCEDIRS : Directories containing the source (.F) files |
# SOURCEDIRS : Directories containing the source (.F) files |
2522 |
# INCLUDEDIRS : Directories containing the header-source (.h) files |
# INCLUDEDIRS : Directories containing the header-source (.h) files |
2536 |
# LIBS : Library flags /or/ additional optimization/debugging flags |
# LIBS : Library flags /or/ additional optimization/debugging flags |
2537 |
|
|
2538 |
ROOTDIR = ${ROOTDIR} |
ROOTDIR = ${ROOTDIR} |
2539 |
BUILDDIR = ${BUILDDIR} |
BUILDDIR = ${BUILDDIR} |
2540 |
SOURCEDIRS = ${SOURCEDIRS} |
SOURCEDIRS = ${SOURCEDIRS} |
2541 |
INCLUDEDIRS = ${INCLUDEDIRS} |
INCLUDEDIRS = ${INCLUDEDIRS} |
2542 |
EXEDIR = ${EXEDIR} |
EXEDIR = ${EXEDIR} |
2562 |
echo "EMBEDDED_FILES = " >>$MAKEFILE |
echo "EMBEDDED_FILES = " >>$MAKEFILE |
2563 |
fi |
fi |
2564 |
|
|
|
# Note: figure out some way to add Hyades JAM libraries here |
|
2565 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
2566 |
# Unix ln (link) |
# Unix ln (link) |
2567 |
LN = ${LN} |
LN = ${LN} |
2593 |
# Optim./debug for FC |
# Optim./debug for FC |
2594 |
F90FLAGS = ${F90FLAGS} |
F90FLAGS = ${F90FLAGS} |
2595 |
F90OPTIM = ${F90OPTIM} |
F90OPTIM = ${F90OPTIM} |
2596 |
|
F90FIXEDFORMAT = ${F90FIXEDFORMAT} |
2597 |
# Flags for CC |
# Flags for CC |
2598 |
CFLAGS = ${CFLAGS} |
CFLAGS = ${CFLAGS} |
2599 |
# Files that should not be optimized |
# Files that should not be optimized |
2606 |
|
|
2607 |
EOF |
EOF |
2608 |
|
|
2609 |
cat srclist.inc >> $MAKEFILE |
cat F77srclist.tmp >> $MAKEFILE |
2610 |
cat csrclist.inc >> $MAKEFILE |
cat nonADF77srclist.tmp >> $MAKEFILE |
2611 |
cat f90srclist.inc >> $MAKEFILE |
cat csrclist.tmp >> $MAKEFILE |
2612 |
cat hlist.inc >> $MAKEFILE |
cat F90srclist.tmp >> $MAKEFILE |
2613 |
cat ad_flow_files.inc >> $MAKEFILE |
cat hsrclist.tmp >> $MAKEFILE |
2614 |
|
cat ad_flow_files.tmp >> $MAKEFILE |
2615 |
|
|
2616 |
|
rm -f F77srclist.tmp nonADF77srclist.tmp csrclist.tmp F90srclist.tmp hsrclist.tmp ad_flow_files.tmp |
2617 |
|
|
2618 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
2619 |
echo 'F77FILES = $(SRCFILES:.F=.'$FS')' >> $MAKEFILE |
|
2620 |
echo 'F90FILES = $(F90SRCFILES:.F90=.'$FS90')' >> $MAKEFILE |
# add definitions for preprocessed sources |
2621 |
echo 'OBJFILES = $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE |
# and note that not all systems allow case sensitive extensions |
2622 |
echo 'FLOFILES = $(AD_FLOW_FILES:.flow=.FLOW)' >> $MAKEFILE |
# hence the $FS and $FS90 here. |
2623 |
|
# for fixed format f90 files we use ff90 or FF90 resp |
2624 |
|
# but these are not expected to be the original source files |
2625 |
|
|
2626 |
|
echo 'F77_PP_SRC_FILES = $(F77_SRC_FILES:.F=.'$FS')' >> $MAKEFILE |
2627 |
|
echo 'F90_PP_SRC_FILES = $(F90_SRC_FILES:.F90=.'$FS90')' >> $MAKEFILE |
2628 |
|
echo 'OBJFILES= $(F77_SRC_FILES:.F=.o) $(C_SRC_FILES:.c=.o) $(F90_SRC_FILES:.F90=.o)' >> $MAKEFILE |
2629 |
|
echo 'FLOFILES = $(AD_FLOW_FILES:.flow=.flowdir)' >> $MAKEFILE |
2630 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
2631 |
echo '.SUFFIXES:' >> $MAKEFILE |
echo '.SUFFIXES:' >> $MAKEFILE |
2632 |
echo '.SUFFIXES: .o .'$FS' .p .F .c .'$FS90' .F90 .FLOW .flow' >> $MAKEFILE |
echo '.SUFFIXES: .o .'$FS' .p .F .c .f'$FS90' .'$FS90' .FF90 .F90 .flowdir .flow' >> $MAKEFILE |
|
rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc |
|
|
rm -f ad_flow_files.inc |
|
2633 |
|
|
2634 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
2635 |
|
|
2636 |
all: \$(EXECUTABLE) |
all: \$(EXECUTABLE) |
2637 |
\$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES) \$(EMBEDDED_FILES) |
\$(EXECUTABLE): \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(OBJFILES) \$(EMBEDDED_FILES) |
2638 |
@echo Creating \$@ ... |
@echo Creating \$@ ... |
2639 |
\$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS) |
\$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS) |
2640 |
depend: |
depend: |
2641 |
@make links |
@make links |
2642 |
\$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(SRCFILES) |
\$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES) |
2643 |
\$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE) |
\$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE) |
2644 |
-rm -f makedepend.out |
-rm -f makedepend.out |
2645 |
|
|
2649 |
ar rcv libmitgcmuv.a \$(OBJFILES) |
ar rcv libmitgcmuv.a \$(OBJFILES) |
2650 |
ar d libmitgcmuv.a main.o |
ar d libmitgcmuv.a main.o |
2651 |
|
|
2652 |
links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES) |
links: \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(SPECIAL_FILES) |
2653 |
|
|
2654 |
small_f: \$(F77FILES) \$(F90FILES) |
small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES) |
2655 |
|
|
2656 |
output.txt: \$(EXECUTABLE) |
output.txt: \$(EXECUTABLE) |
2657 |
@printf 'running ... ' |
@printf 'running ... ' |
2660 |
clean: |
clean: |
2661 |
-rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template |
-rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template |
2662 |
-rm -rf *.o |
-rm -rf *.o |
2663 |
-rm -rf *.$FS *.FLOW |
-rm -rf *.$FS *.flowdir |
2664 |
|
-rm -rf *.f$FS90 \$(AD_CLEAN) ad_input* |
2665 |
Clean: |
Clean: |
2666 |
@make clean |
@make clean |
2667 |
@make cleanlinks |
@make cleanlinks |
2668 |
-rm -f \$(SPECIAL_FILES) |
-rm -f \$(SPECIAL_FILES) |
2669 |
-rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak |
-rm -f genmake_state genmake_*optfile genmake_warnings genmake_errors |
2670 |
|
-rm -f make.log run.log f90mkdepend.log *.bak "$MAKEFILE.old" |
2671 |
-rm -f taf_command taf_output taf_ad.log taf_ad_flow.log |
-rm -f taf_command taf_output taf_ad.log taf_ad_flow.log |
2672 |
CLEAN: |
CLEAN: |
2673 |
@make Clean |
@make Clean |
2684 |
cleanlinks: |
cleanlinks: |
2685 |
-find . -type l -exec rm {} \; |
-find . -type l -exec rm {} \; |
2686 |
|
|
2687 |
# Special targets (SPECIAL_FILES) which are create by make |
# Special targets (SPECIAL_FILES) which are created by make |
2688 |
${PACKAGES_DOT_H}: |
${PACKAGES_DOT_H}: |
2689 |
@echo Creating \$@ ... |
@echo Creating \$@ ... |
2690 |
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@ |
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@ |
2709 |
|
|
2710 |
decode_files.o : EMBEDDED_FILES.h |
decode_files.o : EMBEDDED_FILES.h |
2711 |
|
|
2712 |
## \$(F77FILES) |
## \$(F77_PP_SRC_FILES) |
2713 |
all_fF.tar.gz : \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile |
all_fF.tar.gz : \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile |
2714 |
@echo Creating \$@ ... |
@echo Creating \$@ ... |
2715 |
-tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile |
-tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile |
2716 |
-rm -f all_fF.tar.gz |
-rm -f all_fF.tar.gz |
2717 |
-gzip all_fF.tar |
-gzip all_fF.tar |
2718 |
|
|
2734 |
\$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ |
\$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ |
2735 |
.$FS.o: |
.$FS.o: |
2736 |
\$(FC) \$(FFLAGS) \$(FOPTIM) -c \$< |
\$(FC) \$(FFLAGS) \$(FOPTIM) -c \$< |
2737 |
.F.o: |
.F90.$FS90: |
2738 |
\$(FC) \$(FFLAGS) \$(FOPTIM) -c \$< |
\$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ |
2739 |
.F90.o: |
.FF90.f$FS90: |
2740 |
|
\$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ |
2741 |
|
.$FS90.o: |
2742 |
\$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$< |
\$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$< |
2743 |
|
.f$FS90.o: |
2744 |
|
cp \$< \$(basename \$<).f90 |
2745 |
|
\$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$(F90FIXEDFORMAT) \$(basename \$<).f90 |
2746 |
.c.o: |
.c.o: |
2747 |
\$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$< |
\$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$< |
2748 |
.flow.FLOW: |
.flow.flowdir: |
2749 |
\$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ |
\$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ |
2750 |
|
|
2751 |
# Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain |
# Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain |
2754 |
.p.$FS: |
.p.$FS: |
2755 |
\$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$< |
\$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$< |
2756 |
|
|
2757 |
|
EOF |
2758 |
|
|
2759 |
#========================================= |
#========================================= |
2760 |
#=== Automatic Differentiation Rules === |
#=== Automatic Differentiation Rules === |
2761 |
|
#=== for TAMC/TAF ====================== |
2762 |
|
|
2763 |
|
if test "x$OPENAD" = x ; then |
2764 |
|
|
2765 |
|
cat >>$MAKEFILE <<EOF |
2766 |
|
|
2767 |
TAMC = ${TAMC} |
TAMC = ${TAMC} |
2768 |
TAF = ${TAF} |
TAF = ${TAF} |
2786 |
echo " Add the source list for AD code generation" |
echo " Add the source list for AD code generation" |
2787 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
2788 |
printf "AD_FILES = " >> $MAKEFILE |
printf "AD_FILES = " >> $MAKEFILE |
2789 |
AD_FILES=`cat ad_files` |
AD_FILES=`cat adSrcFiles.tmp` |
2790 |
for i in $AD_FILES ; do |
for i in $AD_FILES ; do |
2791 |
echo " \\" >> $MAKEFILE |
echo " \\" >> $MAKEFILE |
2792 |
printf " $i" >> $MAKEFILE |
printf " $i" >> $MAKEFILE |
2793 |
done |
done |
2794 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
2795 |
rm -f ad_files |
rm -f adSrcFiles.tmp |
2796 |
|
|
2797 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
2798 |
|
|
2801 |
adtaf: ad_taf_output.$FS |
adtaf: ad_taf_output.$FS |
2802 |
adtamc: ad_tamc_output.$FS |
adtamc: ad_tamc_output.$FS |
2803 |
|
|
2804 |
ad_input_code.$FS: \$(AD_FILES) \$(HEADERFILES) |
ad_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES) \$(AD_FLOW_FILES) |
2805 |
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template |
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template |
2806 |
cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h |
cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h |
2807 |
-rm -f ad_config.template |
-rm -f ad_config.template |
2808 |
@make \$(F77FILES) |
@make \$(F77_PP_SRC_FILES) |
2809 |
@make \$(FLOFILES) |
@make \$(FLOFILES) |
2810 |
cat \$(FLOFILES) \$(AD_FILES) > ad_input_code.$FS |
cat \$(FLOFILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ad_input_code.$FS |
2811 |
|
|
2812 |
ad_taf_output.$FS: ad_input_code.$FS |
ad_taf_output.$FS: ad_input_code.$FS |
2813 |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
2814 |
|
ls -l ad_input_code_ad.$FS |
2815 |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
2816 |
|
|
2817 |
adtafonly: |
adtafonly: |
2818 |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
2819 |
|
ls -l ad_input_code_ad.$FS |
2820 |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
2821 |
|
|
2822 |
\${EXE_AD}: ad_taf_output.o \$(OBJFILES) |
\${EXE_AD}: ad_taf_output.o \$(OBJFILES) |
2840 |
ftltaf: ftl_taf_output.$FS |
ftltaf: ftl_taf_output.$FS |
2841 |
ftltamc: ftl_tamc_output.$FS |
ftltamc: ftl_tamc_output.$FS |
2842 |
|
|
2843 |
ftl_input_code.$FS: \$(AD_FILES) \$(HEADERFILES) |
ftl_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES) |
2844 |
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template |
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template |
2845 |
cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h |
cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h |
2846 |
-rm -f ftl_config.template |
-rm -f ftl_config.template |
2847 |
@make \$(F77FILES) |
@make \$(F77_PP_SRC_FILES) |
2848 |
@make \$(AD_FLOW_FILES) |
@make \$(AD_FLOW_FILES) |
2849 |
cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS |
cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS |
2850 |
|
|
2851 |
ftl_taf_output.$FS: ftl_input_code.$FS |
ftl_taf_output.$FS: ftl_input_code.$FS |
2852 |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
2853 |
|
ls -l ftl_input_code_ftl.$FS |
2854 |
cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
2855 |
|
|
2856 |
ftltafonly: |
ftltafonly: |
2857 |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
\$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS |
2858 |
|
ls -l ftl_input_code_ftl.$FS |
2859 |
cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS |
2860 |
|
|
2861 |
ftl_taf: ftl_taf_output.o \$(OBJFILES) |
ftl_taf: ftl_taf_output.o \$(OBJFILES) |
2893 |
cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h |
cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h |
2894 |
-rm -f ftl_config.template |
-rm -f ftl_config.template |
2895 |
|
|
2896 |
#========================================= |
EOF |
2897 |
|
|
2898 |
|
fi |
2899 |
|
|
2900 |
|
#=== for OpenAD ======================== |
2901 |
|
|
2902 |
|
if test "x$OPENAD" != x ; then |
2903 |
|
|
2904 |
|
# ============ begin OpenAD specific section ============== |
2905 |
|
|
2906 |
|
cat >>$MAKEFILE <<EOF |
2907 |
|
|
2908 |
|
# all the source files linked from the various locations: |
2909 |
|
ALL_LINKED_FILES= \ |
2910 |
|
\$(F77_SRC_FILES) \ |
2911 |
|
\$(C_SRC_FILES) \ |
2912 |
|
\$(H_SRC_FILES) \ |
2913 |
|
\$(F90_SRC_FILES) \ |
2914 |
|
\$(SPECIAL_FILES) |
2915 |
|
|
2916 |
|
ifndef OPENADROOT |
2917 |
|
\$(error "Error: environment variable OPENADROOT not defined!") |
2918 |
|
endif |
2919 |
|
|
2920 |
|
ifndef XAIFSCHEMAROOT |
2921 |
|
\$(error "Error: environment variable XAIFSCHEMAROOT not defined!") |
2922 |
|
endif |
2923 |
|
|
2924 |
|
ifndef XAIFBOOSTERROOT |
2925 |
|
\$(error "Error: environment variable XAIFBOOSTERROOT not defined!") |
2926 |
|
endif |
2927 |
|
|
2928 |
|
EOF |
2929 |
|
|
2930 |
|
echo " Add the source list for common block to module conversion " |
2931 |
|
echo >> $MAKEFILE |
2932 |
|
printf "CB2M_F90_SRC_NAMES = " >> $MAKEFILE |
2933 |
|
for i in `cat ${OAD_CB2M_FILES}` ; do |
2934 |
|
echo " \\" >> $MAKEFILE |
2935 |
|
printf " $i" >> $MAKEFILE |
2936 |
|
done |
2937 |
|
echo >> $MAKEFILE |
2938 |
|
|
2939 |
|
echo " Add the source list for AD code generation" |
2940 |
|
echo >> $MAKEFILE |
2941 |
|
printf "AD_FILES = " >> $MAKEFILE |
2942 |
|
for i in `cat ${OAD_CB2M_FILES}` ; do |
2943 |
|
echo " \\" >> $MAKEFILE |
2944 |
|
printf " ${i}_mod.f$FS90" >> $MAKEFILE |
2945 |
|
done |
2946 |
|
AD_FILES=`cat adSrcFiles.tmp` |
2947 |
|
for i in $AD_FILES ; do |
2948 |
|
basename=${i%%.f} |
2949 |
|
toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE} ${OAD_DONT_TRANSFORM}` |
2950 |
|
if test -z "$toBeIgnored" ; then |
2951 |
|
echo " \\" >> $MAKEFILE |
2952 |
|
printf " $i" >> $MAKEFILE |
2953 |
|
fi |
2954 |
|
done |
2955 |
|
echo >> $MAKEFILE |
2956 |
|
rm -f adSrcFiles.tmp |
2957 |
|
|
2958 |
|
cat >>$MAKEFILE <<EOF |
2959 |
|
|
2960 |
|
adAll: \$(EXE_AD) |
2961 |
|
.PHONY: adAll |
2962 |
|
|
2963 |
|
CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES)) |
2964 |
|
|
2965 |
|
.PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90) |
2966 |
|
|
2967 |
|
.PHONY: adDepend |
2968 |
|
adDepend: \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) \$(addsuffix _mod.FF90, \$(CB2M_F90_SRC_NAMES)) \$(F77_SRC_FILES:.F=_cb2m.FF90) |
2969 |
|
\$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES) |
2970 |
|
\$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE) |
2971 |
|
-rm -f makedepend.out |
2972 |
|
|
2973 |
|
OPENAD_SUPPORT_F90_SRC_FILES = \ |
2974 |
|
w2f__types.F90 \ |
2975 |
|
OAD_active.F90 \ |
2976 |
|
OAD_cp.F90 \ |
2977 |
|
OAD_rev.F90 \ |
2978 |
|
OAD_tape.F90 |
2979 |
|
|
2980 |
|
OPENAD_SUPPORT_C_SRC_FILES = \ |
2981 |
|
iaddr.c \ |
2982 |
|
timeRatio.c |
2983 |
|
|
2984 |
|
f95_test_mods.f90: \$(OPENAD_SUPPORT_F90_SRC_FILES:F90=$FS90) |
2985 |
|
cat \$^ > \$@ |
2986 |
|
|
2987 |
|
f95_test.f90: all_mods.xb.x2w.w2f.pp.f$FS90 \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90) ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90 |
2988 |
|
cat \$^ > \$@ |
2989 |
|
|
2990 |
|
f95_test.out: f95_test_mods.f90 f95_test.f90 |
2991 |
|
f95 -fixed -w=unused -maxcontin=132 -c f95_test_mods.f90 > \$@ 2>&1 |
2992 |
|
f95 -fixed -w=unused -maxcontin=132 -c -fixed f95_test.f90 >> \$@ 2>&1 |
2993 |
|
|
2994 |
|
# the file included below is created by the |
2995 |
|
# postProcessor and its inclusion sets the |
2996 |
|
# variable POSTPROCESSEDFILES |
2997 |
|
# used below. Because the file is made during |
2998 |
|
# make it won't be read until the second (recursive) |
2999 |
|
# invocation in the rule below |
3000 |
|
-include postProcess.make |
3001 |
|
|
3002 |
|
AD_OBJ_FILES_S1=\$(OPENAD_SUPPORT_F90_SRC_FILES:.F90=.o) \$(OPENAD_SUPPORT_C_SRC_FILES:.c=.o) \$(POSTPROCESSEDFILES:.f$FS90=.o) |
3003 |
|
|
3004 |
|
AD_OBJ_FILES_S2=\$(AD_OBJ_FILES_S1) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.o) \$(C_SRC_FILES:.c=.o) \$(F90_SRC_FILES:.F90=.o) |
3005 |
|
|
3006 |
|
postProcess.comp: \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) postProcess.tag \$(AD_OBJ_FILES_S1) |
3007 |
|
ifeq (\$(MAKELEVEL),0) |
3008 |
|
\$(MAKE) adAll |
3009 |
|
else |
3010 |
|
touch \$@ |
3011 |
|
endif |
3012 |
|
|
3013 |
|
\$(EXE_AD): \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) postProcess.comp \$(AD_OBJ_FILES_S2) |
3014 |
|
ifeq (\$(MAKELEVEL),1) |
3015 |
|
\$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(AD_OBJ_FILES_S2) \$(LIBS) |
3016 |
|
else |
3017 |
|
touch \$@ |
3018 |
|
endif |
3019 |
|
|
3020 |
|
# makefile debug rule |
3021 |
|
openad: ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90 |
3022 |
|
.PHONY: openad |
3023 |
|
|
3024 |
|
# create the module files |
3025 |
|
%_mod.FF90 : %.h ../OAD_support/cb2mGetModules.csh ../OAD_support/cb2mGetModules.awk |
3026 |
|
../OAD_support/cb2mGetModules.csh $< ../OAD_support/cb2mGetModules.awk |
3027 |
|
|
3028 |
|
# create the header files |
3029 |
|
%_mod.h : %.h ../OAD_support/cb2mGetHeaders.csh ../OAD_support/cb2mGetHeaders.awk |
3030 |
|
../OAD_support/cb2mGetHeaders.csh $< ../OAD_support/cb2mGetHeaders.awk \$(CB2M_F90_SRC_NAMES) |
3031 |
|
|
3032 |
|
# change everybody else to use the new module files: |
3033 |
|
%_cb2m.FF90 : %.F ../OAD_support/cb2mUseModules.bash |
3034 |
|
../OAD_support/cb2mUseModules.bash $< ${MPI} |
3035 |
|
|
3036 |
|
# makefile debug rule |
3037 |
|
small_f: \$(CB2M_F90_PP_SRC_FILES) |
3038 |
|
.PHONY: small_f |
3039 |
|
|
3040 |
|
ad_output.txt: \$(EXE_AD) |
3041 |
|
@printf 'linking data files ... ' |
3042 |
|
\$(LN) -f ../input_ad/data* ../input_ad/eedata . |
3043 |
|
\$(LN) -f ../../global_ocean.90x40x15/input/*.bin . |
3044 |
|
@printf 'running ... ' |
3045 |
|
@./\$(EXE_AD) > \$@ |
3046 |
|
|
3047 |
|
CB2M_AD_FILES=\$(AD_FILES:.f=_cb2m.f$FS90) |
3048 |
|
ad_input_code.f$FS90: \$(CB2M_AD_FILES) |
3049 |
|
cat \$^ > \$@ |
3050 |
|
|
3051 |
|
# strip all comments and blanks to reduce |
3052 |
|
# the file size in order to reduce perl's memory requirements |
3053 |
|
ad_input_code_sf.f$FS90 : ad_input_code.f$FS90 |
3054 |
|
cat \$^ | sed -f ../OAD_support/strip.sed | sed -f ../OAD_support/stop2print.sed > \$@ |
3055 |
|
|
3056 |
|
# mfef90 preprocessing |
3057 |
|
# expand statement functions |
3058 |
|
# expose mfef90 specific substring handling |
3059 |
|
# add the w2f__types module |
3060 |
|
ad_input_code_sf.w2f.f$FS90: ad_input_code_sf.f$FS90 mfef90 whirl2f whirl2f_be w2f__types.f90 |
3061 |
|
./mfef90 -r8 -z -F -N132 \$< |
3062 |
|
mv \$<.B \$(basename \$<).B |
3063 |
|
./whirl2f -openad \$(basename \$<).B |
3064 |
|
cat w2f__types.f90 \$(basename \$<).w2f.f > \$@ |
3065 |
|
|
3066 |
|
# canonicalizer |
3067 |
|
ad_input_code_sf.w2f.pre.f$FS90: ad_input_code_sf.w2f.f$FS90 preProcess.py |
3068 |
|
./preProcess.py --timing --r8 -H -S \$< -o \$@ |
3069 |
|
|
3070 |
|
# F -> WHIRL |
3071 |
|
# note that the canonicalized version cuts off at col 72 |
3072 |
|
# doing this also for string constants which is ok as long |
3073 |
|
# as we are in fixed mode and cut of exactly there. |
3074 |
|
# Otherwise mfef90 patches in spaces to fill up to 72 (or 132) |
3075 |
|
# characters respectively. |
3076 |
|
ad_input_code_sf.w2f.pre.B: ad_input_code_sf.w2f.pre.f$FS90 mfef90 |
3077 |
|
./mfef90 -r8 -z -F \$< |
3078 |
|
mv \$<.B \$@ |
3079 |
|
|
3080 |
|
# WHIRL -> XAIF |
3081 |
|
ad_input_code_sf.w2f.pre.xaif : ad_input_code_sf.w2f.pre.B whirl2xaif |
3082 |
|
./whirl2xaif -s -n --debug 1 -o \$@ \$< |
3083 |
|
|
3084 |
|
# XAIF -> XAIF' |
3085 |
|
ad_input_code_sf.w2f.pre.xb.xaif : ad_input_code_sf.w2f.pre.xaif xaif.xsd xaif_base.xsd xaif_inlinable_intrinsics.xsd xaif_derivative_propagator.xsd xaif_output.xsd oadDriver |
3086 |
|
./oadDriver -f -t forward_step -i \$< -c \${XAIFSCHEMAROOT}/schema/examples/inlinable_intrinsics.xaif -o \$@ -I -r |
3087 |
|
|
3088 |
|
# XAIF' -> WHIRL' |
3089 |
|
ad_input_code_sf.w2f.pre.xb.x2w.B : ad_input_code_sf.w2f.pre.xb.xaif xaif2whirl |
3090 |
|
./xaif2whirl --debug 1 ad_input_code_sf.w2f.pre.B \$< |
3091 |
|
|
3092 |
|
# WHIRL' -> F' |
3093 |
|
ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.B whirl2f whirl2f_be |
3094 |
|
./whirl2f -FLIST:ftn_file=\$@ -openad \$< |
3095 |
|
|
3096 |
|
# insert template directives |
3097 |
|
ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90 ../OAD_support/insertTemplateDir.bash |
3098 |
|
../OAD_support/insertTemplateDir.bash \$< \$@ |
3099 |
|
|
3100 |
|
PPEXTRAS=\$(wildcard ../OAD_support/ad_template.*.F) ../OAD_support/ad_inline.F |
3101 |
|
# postprocess F' |
3102 |
|
postProcess.tag: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90 postProcess.py \$(PPEXTRAS:.F=.f) |
3103 |
|
# the target is a placeholder to signal execution of the rule |
3104 |
|
touch \$@ |
3105 |
|
# this step also creates the file postProcess.make but we cannot |
3106 |
|
# name it as the target or else make will try to remake it for |
3107 |
|
# the include directive above for any rule, e.g. make clean |
3108 |
|
./postProcess.py --progress --timing --outputFormat=fixed -m r -i ../OAD_support/ad_inline.f --width 4 \$< |
3109 |
|
|
3110 |
|
# setup some links |
3111 |
|
%.xsd: |
3112 |
|
\$(LN) \${XAIFSCHEMAROOT}/schema/\$@ . |
3113 |
|
|
3114 |
|
mfef90: |
3115 |
|
\$(LN) \${OPEN64ROOT}/crayf90/sgi/mfef90 . |
3116 |
|
|
3117 |
|
# link the support files: |
3118 |
|
\$(OPENAD_SUPPORT_F90_SRC_FILES) \$(OPENAD_SUPPORT_C_SRC_FILES): |
3119 |
|
\$(LN) ../OAD_support/\$@ . |
3120 |
|
|
3121 |
|
whirl2xaif xaif2whirl: |
3122 |
|
\$(LN) \${OPENADFORTTK}/bin/\$@ . |
3123 |
|
|
3124 |
|
preProcess.py postProcess.py: |
3125 |
|
\$(LN) \${OPENADFORTTK_BASE}/tools/SourceProcessing/\$@ . |
3126 |
|
|
3127 |
|
whirl2f whirl2f_be: |
3128 |
|
\$(LN) \${OPEN64ROOT}/whirl2f/\$@ . |
3129 |
|
|
3130 |
|
oadDriver: |
3131 |
|
\$(LN) \${XAIFBOOSTERROOT}/xaifBooster/algorithms/BasicBlockPreaccumulationReverse/driver/oadDriver \$@ |
3132 |
|
|
3133 |
|
AD_CLEAN += *_mod.h *_mod.F90 *.FF90 *.mod-whirl temp.sed oad_cp.* postProcess.make postProcess.tag postProcess.comp \$(PPEXTRAS:.F=.f) |
3134 |
|
|
3135 |
|
# ============ end OpenAD specific section ============== |
3136 |
|
|
3137 |
EOF |
EOF |
3138 |
|
|
3139 |
|
fi |
3140 |
|
|
3141 |
|
#========================================= |
3142 |
|
|
3143 |
if test "x$EXEHOOK" != x ; then |
if test "x$EXEHOOK" != x ; then |
3144 |
printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE |
printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE |
3145 |
fi |
fi |