13 |
test_for_package_in_cpp_options() { |
test_for_package_in_cpp_options() { |
14 |
cpp_options=$1 |
cpp_options=$1 |
15 |
pkg=$2 |
pkg=$2 |
16 |
test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg" || exit 99 |
test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg[ ]" |
17 |
test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg" || exit 99 |
test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg[ ]" |
18 |
test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg" || exit 99 |
test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg[ ]" |
19 |
test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg" || exit 99 |
test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg[ ]" |
20 |
|
test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg$" |
21 |
|
test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg$" |
22 |
|
test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg$" |
23 |
|
test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg$" |
24 |
} |
} |
25 |
|
|
26 |
# Search for particular CPP #cmds associated with MPI |
# Search for particular CPP #cmds associated with MPI |
27 |
# usage: test_for_mpi_in_cpp_eeoptions CPP_file |
# usage: test_for_mpi_in_cpp_eeoptions CPP_file |
28 |
test_for_mpi_in_cpp_eeoptions() { |
test_for_mpi_in_cpp_eeoptions() { |
29 |
cpp_options=$1 |
cpp_options=$1 |
30 |
test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI" || exit 99 |
test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI[ ]" |
31 |
test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI" || exit 99 |
test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI[ ]" |
32 |
test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI" || exit 99 |
test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI[ ]" |
33 |
test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI" || exit 99 |
test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI[ ]" |
34 |
|
test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI$" |
35 |
|
test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI$" |
36 |
|
test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI$" |
37 |
|
test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI$" |
38 |
} |
} |
39 |
|
|
40 |
# Search for particular string in a file. Return 1 if detected, 0 if not |
# Search for particular string in a file. Return 1 if detected, 0 if not |
47 |
if test "x${RETVAL}" = x0 ; then |
if test "x${RETVAL}" = x0 ; then |
48 |
printf "Error: In $file there is an illegal line: " |
printf "Error: In $file there is an illegal line: " |
49 |
grep -i "$strng" $file |
grep -i "$strng" $file |
50 |
return 1 |
exit 99 |
51 |
fi |
fi |
52 |
return 0 |
return 0 |
53 |
} |
} |
256 |
fi |
fi |
257 |
} |
} |
258 |
|
|
259 |
|
|
260 |
|
build_embed_encode() |
261 |
|
{ |
262 |
|
printf " building the embed-encode utility... " |
263 |
|
if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then |
264 |
|
if test ! -d "$ROOTDIR/tools/embed_encode" ; then |
265 |
|
echo |
266 |
|
echo " Error: can't locate \"$ROOTDIR/tools/embed_encode\"" |
267 |
|
echo |
268 |
|
EMBED_SRC=f |
269 |
|
return 1 |
270 |
|
fi |
271 |
|
clist="cc gcc c89 $CC" |
272 |
|
for ic in $clist ; do |
273 |
|
comm="$ic -o encode_files encode_files.c" |
274 |
|
( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1 |
275 |
|
RETVAL=$? |
276 |
|
if test "x$RETVAL" = x0 ; then |
277 |
|
echo "OK" |
278 |
|
DEFINES="$DEFINES -DHAVE_EMBED_SRC" |
279 |
|
return 0 |
280 |
|
fi |
281 |
|
done |
282 |
|
echo |
283 |
|
echo " Error: unable to build $ROOTDIR/embed_encode/encode_files" |
284 |
|
echo " so it has been disabled" |
285 |
|
echo |
286 |
|
EMBED_SRC=f |
287 |
|
return 1 |
288 |
|
fi |
289 |
|
echo "OK" |
290 |
|
DEFINES="$DEFINES -DHAVE_EMBED_SRC" |
291 |
|
} |
292 |
|
|
293 |
|
|
294 |
# Guess possible config options for this host |
# Guess possible config options for this host |
295 |
find_possible_configs() { |
find_possible_configs() { |
296 |
|
|
325 |
|
|
326 |
#================================================================ |
#================================================================ |
327 |
# look for possible C compilers |
# look for possible C compilers |
328 |
tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc" |
tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc icc" |
329 |
p_CC= |
p_CC= |
330 |
for c in $tmp ; do |
for c in $tmp ; do |
331 |
rm -f ./genmake_hello.c ./genmake_hello |
rm -f ./genmake_hello.c ./genmake_hello |
364 |
|
|
365 |
#================================================================ |
#================================================================ |
366 |
# look for possible FORTRAN compilers |
# look for possible FORTRAN compilers |
367 |
tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95 gfortran" |
tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc ifort f90 f95 mpif77 mpf77 mpxlf95 gfortran g95" |
368 |
p_FC= |
p_FC= |
369 |
for c in $tmp ; do |
for c in $tmp ; do |
370 |
rm -f ./hello.f ./hello |
rm -f ./hello.f ./hello |
396 |
else |
else |
397 |
echo " The possible FORTRAN compilers found in your path are:" |
echo " The possible FORTRAN compilers found in your path are:" |
398 |
echo " "$p_FC |
echo " "$p_FC |
399 |
if test "x$FC" = x ; then |
fi |
400 |
FC=`echo $p_FC | $AWK '{print $1}'` |
|
401 |
echo " Setting FORTRAN compiler to: "$FC |
# Use the first of the compilers found in the current PATH |
402 |
fi |
# that has a correctly-named optfile |
403 |
|
if test "x$OPTFILE" = x -a "x$FC" = x ; then |
404 |
|
for i in $p_FC ; do |
405 |
|
OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i |
406 |
|
if test -r $OPTFILE ; then |
407 |
|
echo " Setting OPTFILE to: "$OPTFILE |
408 |
|
break |
409 |
|
fi |
410 |
|
done |
411 |
fi |
fi |
412 |
|
|
413 |
if test "x$OPTFILE" = x ; then |
if test "x$OPTFILE" = x ; then |
578 |
*only* works if it is supported by the OPTFILE that |
*only* works if it is supported by the OPTFILE that |
579 |
is being used. |
is being used. |
580 |
|
|
581 |
|
-ignoretime | -ignore_time | --ignoretime | --ignore_time |
582 |
|
Ignore all the "wall clock" routines entirely. This will |
583 |
|
not in any way hurt the model results -- it simply means |
584 |
|
that the code that checks how long the model spends in |
585 |
|
various routines will give junk values. |
586 |
|
|
587 |
|
-ts | --ts |
588 |
|
Produce timing information per timestep |
589 |
|
-papis | --papis |
590 |
|
Produce summary MFlop/s (and IPC) with PAPI per timestep |
591 |
|
-pcls | --pcls |
592 |
|
Produce summary MFlop/s etc. with PCL per timestep |
593 |
|
-foolad | --foolad |
594 |
|
Fool the AD code generator |
595 |
|
-papi | --papi |
596 |
|
Performance analysis with PAPI |
597 |
|
-pcl | --pcl |
598 |
|
Performance analysis with PCL |
599 |
|
-hpmt | --hpmt |
600 |
|
Performance analysis with the HPM Toolkit |
601 |
|
|
602 |
|
-gsl | --gsl |
603 |
|
Use GSL to control floating point rounding and precision |
604 |
|
-devel | --devel |
605 |
|
Add additional warning and debugging flags for development |
606 |
|
|
607 |
-mpi | --mpi |
-mpi | --mpi |
608 |
Include MPI header files and link to MPI libraries |
Include MPI header files and link to MPI libraries |
609 |
-mpi=PATH | --mpi=PATH |
-mpi=PATH | --mpi=PATH |
611 |
set to PATH. i.e. Include files from \$PATH/include, link to libraries |
set to PATH. i.e. Include files from \$PATH/include, link to libraries |
612 |
from \$PATH/lib and use binaries from \$PATH/bin. |
from \$PATH/lib and use binaries from \$PATH/bin. |
613 |
|
|
614 |
|
-es | --es | -embed-source | --embed-source |
615 |
|
Embed a tarball containing the full source code |
616 |
|
(including the Makefile, etc.) used to build the |
617 |
|
executable [off by default] |
618 |
|
|
619 |
-bash NAME |
-bash NAME |
620 |
Explicitly specify the Bourne or BASH shell to use |
Explicitly specify the Bourne or BASH shell to use |
621 |
|
|
680 |
call tsub( string ) |
call tsub( string ) |
681 |
end |
end |
682 |
EOF |
EOF |
683 |
$FC $FFLAGS $DEFINES -c genmake_tcomp.$FS >> genmake_warnings 2>&1 |
$FC $FFLAGS -c genmake_tcomp.$FS >> genmake_warnings 2>&1 |
684 |
RETVAL=$? |
RETVAL=$? |
685 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
686 |
FC_NAMEMANGLE=$default_nm |
FC_NAMEMANGLE=$default_nm |
750 |
RET_C=$? |
RET_C=$? |
751 |
cat <<EOF > genmake_tc_2.$FS |
cat <<EOF > genmake_tc_2.$FS |
752 |
program hello |
program hello |
753 |
Real*8 wtime |
REAL*8 wtime |
754 |
external cloc |
external cloc |
755 |
call cloc(wtime) |
call cloc(wtime) |
756 |
print *," HELLO WORLD", wtime |
print *," HELLO WORLD", wtime |
757 |
end program hello |
end |
758 |
EOF |
EOF |
759 |
$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1 |
COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o" |
760 |
|
echo $COMM >> genmake_warnings |
761 |
|
$COMM >> genmake_warnings 2>&1 |
762 |
RET_F=$? |
RET_F=$? |
763 |
test -x ./genmake_tc && ./genmake_tc >> genmake_warnings 2>&1 |
test -x ./genmake_tc && ./genmake_tc >> genmake_warnings 2>&1 |
764 |
RETVAL=$? |
RETVAL=$? |
770 |
} |
} |
771 |
|
|
772 |
|
|
773 |
|
check_HAVE_SIGREG() { |
774 |
|
if test ! "x$HAVE_SIGREG" = x ; then |
775 |
|
return |
776 |
|
fi |
777 |
|
get_fortran_c_namemangling |
778 |
|
cat <<EOF > genmake_tc_1.c |
779 |
|
$FC_NAMEMANGLE |
780 |
|
#include <stdlib.h> |
781 |
|
#include <stdio.h> |
782 |
|
#include <signal.h> |
783 |
|
#include <errno.h> |
784 |
|
#include <ucontext.h> |
785 |
|
|
786 |
|
int * ip; |
787 |
|
|
788 |
|
static void killhandler( |
789 |
|
unsigned int sn, siginfo_t si, struct ucontext *sc ) |
790 |
|
{ |
791 |
|
*ip = *ip + 1; |
792 |
|
return; |
793 |
|
} |
794 |
|
|
795 |
|
void FC_NAMEMANGLE(sigreg) (int * aip) |
796 |
|
{ |
797 |
|
struct sigaction s; |
798 |
|
ip = aip; |
799 |
|
s.sa_flags = SA_SIGINFO; |
800 |
|
s.sa_sigaction = (void *)killhandler; |
801 |
|
if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) { |
802 |
|
printf("Sigaction returned error = %d\n", errno); |
803 |
|
exit(0); |
804 |
|
} |
805 |
|
return; |
806 |
|
} |
807 |
|
EOF |
808 |
|
make genmake_tc_1.o >> genmake_warnings 2>&1 |
809 |
|
RET_C=$? |
810 |
|
cat <<EOF > genmake_tc_2.$FS |
811 |
|
program hello |
812 |
|
integer anint |
813 |
|
common /iv/ anint |
814 |
|
external sigreg |
815 |
|
call sigreg(anint) |
816 |
|
end |
817 |
|
EOF |
818 |
|
echo >> genmake_warnings |
819 |
|
echo "running: check_HAVE_SIGREG()" >> genmake_warnings |
820 |
|
cat genmake_tc_2.$FS >> genmake_warnings |
821 |
|
COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o" |
822 |
|
echo $COMM >> genmake_warnings |
823 |
|
$COMM >> genmake_warnings 2>&1 |
824 |
|
RETVAL=$? |
825 |
|
if test "x$RETVAL" = x0 ; then |
826 |
|
HAVE_SIGREG=t |
827 |
|
DEFINES="$DEFINES -DHAVE_SIGREG" |
828 |
|
fi |
829 |
|
rm -f genmake_tc* |
830 |
|
} |
831 |
|
|
832 |
|
|
833 |
|
check_HAVE_SETRLSTK() { |
834 |
|
if test "x$HAVE_SETRLSTK" = xt ; then |
835 |
|
DEFINES="$DEFINES -DHAVE_SETRLSTK" |
836 |
|
return |
837 |
|
fi |
838 |
|
if test ! "x$HAVE_SETRLSTK" = x ; then |
839 |
|
return |
840 |
|
fi |
841 |
|
get_fortran_c_namemangling |
842 |
|
cat <<EOF > genmake_tc_1.c |
843 |
|
$FC_NAMEMANGLE |
844 |
|
#include <sys/time.h> |
845 |
|
#include <sys/resource.h> |
846 |
|
#include <unistd.h> |
847 |
|
void FC_NAMEMANGLE(setrlstk) () |
848 |
|
{ |
849 |
|
struct rlimit rls; |
850 |
|
rls.rlim_cur = RLIM_INFINITY; |
851 |
|
rls.rlim_max = RLIM_INFINITY; |
852 |
|
setrlimit(RLIMIT_STACK, &rls); |
853 |
|
return; |
854 |
|
} |
855 |
|
EOF |
856 |
|
make genmake_tc_1.o >> genmake_warnings 2>&1 |
857 |
|
RET_C=$? |
858 |
|
cat <<EOF > genmake_tc_2.$FS |
859 |
|
program hello |
860 |
|
external setrlstk |
861 |
|
call setrlstk() |
862 |
|
end |
863 |
|
EOF |
864 |
|
echo >> genmake_warnings |
865 |
|
echo "running: check_HAVE_SETRLSTK()" >> genmake_warnings |
866 |
|
cat genmake_tc_2.$FS >> genmake_warnings |
867 |
|
COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o" |
868 |
|
echo $COMM >> genmake_warnings |
869 |
|
$COMM >> genmake_warnings 2>&1 |
870 |
|
RETVAL=$? |
871 |
|
if test "x$RETVAL" = x0 ; then |
872 |
|
HAVE_SETRLSTK=t |
873 |
|
DEFINES="$DEFINES -DHAVE_SETRLSTK" |
874 |
|
fi |
875 |
|
rm -f genmake_tc* |
876 |
|
} |
877 |
|
|
878 |
|
|
879 |
check_HAVE_STAT() { |
check_HAVE_STAT() { |
880 |
get_fortran_c_namemangling |
get_fortran_c_namemangling |
881 |
cat <<EOF > genmake_tc_1.c |
cat <<EOF > genmake_tc_1.c |
904 |
integer nbyte |
integer nbyte |
905 |
call tfsize(nbyte) |
call tfsize(nbyte) |
906 |
print *," HELLO WORLD", nbyte |
print *," HELLO WORLD", nbyte |
907 |
end program hello |
end |
908 |
EOF |
EOF |
909 |
$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_tc.log 2>&1 |
echo >> genmake_warnings |
910 |
RET_F=$? |
echo "running: check_HAVE_STAT()" >> genmake_warnings |
911 |
test -x ./genmake_tc && ./genmake_tc >> genmake_tc.log 2>&1 |
cat genmake_tc_2.$FS >> genmake_warnings |
912 |
|
COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o" |
913 |
|
echo $COMM >> genmake_warnings |
914 |
|
$COMM >> genmake_tc.log 2>&1 |
915 |
RETVAL=$? |
RETVAL=$? |
916 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
917 |
HAVE_STAT=t |
HAVE_STAT=t |
925 |
if test ! "x$SKIP_NETCDF_CHECK" = x ; then |
if test ! "x$SKIP_NETCDF_CHECK" = x ; then |
926 |
return |
return |
927 |
fi |
fi |
928 |
echo "" > genmake_tnc.log |
echo >> genmake_warnings |
929 |
|
echo "running: check_netcdf_libs()" >> genmake_warnings |
930 |
cat <<EOF > genmake_tnc.F |
cat <<EOF > genmake_tnc.F |
931 |
program fgennc |
program fgennc |
932 |
#include "netcdf.inc" |
#include "netcdf.inc" |
944 |
IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret) |
IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret) |
945 |
end |
end |
946 |
EOF |
EOF |
947 |
echo "Executing:" > genmake_tnc.log |
echo "=== genmake_tnc.F ===" > genmake_tnc.log |
948 |
echo " $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS" \ |
cat genmake_tnc.F >> genmake_tnc.log |
949 |
> genmake_tnc.log |
echo "=== genmake_tnc.F ===" >> genmake_tnc.log |
950 |
RET_CPP=f |
RET_CPP=f |
951 |
$CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null \ |
COMM="cat genmake_tnc.F | $CPP $DEFINES $INCLUDES" |
952 |
&& RET_CPP=t |
echo "$COMM" >> genmake_tnc.log |
953 |
|
eval $COMM > genmake_tnc.$FS 2>/dev/null && RET_CPP=t |
954 |
if test "x$RET_CPP" = xf ; then |
if test "x$RET_CPP" = xf ; then |
955 |
echo " WARNING: CPP failed to pre-process the netcdf test." \ |
echo " WARNING: CPP failed to pre-process the netcdf test." \ |
956 |
> genmake_tnc.log |
>> genmake_tnc.log |
957 |
echo " Please check that \$INCLUDES is properly set." \ |
echo " Please check that \$INCLUDES is properly set." \ |
958 |
> genmake_tnc.log |
>> genmake_tnc.log |
959 |
fi |
fi |
960 |
echo "Executing:" > genmake_tnc.log |
echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log |
961 |
echo " $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS" > genmake_tnc.log |
echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc.o $LIBS" >> genmake_tnc.log |
|
echo " $LINK -o genmake_tnc.o $LIBS" > genmake_tnc.log |
|
962 |
$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \ |
$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \ |
963 |
&& $LINK -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1 |
&& $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1 |
964 |
RET_COMPILE=$? |
RET_COMPILE=$? |
965 |
|
cat genmake_tnc.log >> genmake_warnings |
966 |
|
|
967 |
#EH3 Remove test program execution for machines that either disallow |
#EH3 Remove test program execution for machines that either disallow |
968 |
#EH3 execution or cannot support it (eg. cross-compilers) |
#EH3 execution or cannot support it (eg. cross-compilers) |
975 |
HAVE_NETCDF=t |
HAVE_NETCDF=t |
976 |
else |
else |
977 |
# try again with "-lnetcdf" added to the libs |
# try again with "-lnetcdf" added to the libs |
978 |
$CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null \ |
echo "try again with added '-lnetcdf'" > genmake_tnc.log |
979 |
|
echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log |
980 |
|
echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log |
981 |
|
echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log |
982 |
|
cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \ |
983 |
&& $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \ |
&& $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \ |
984 |
&& $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1 |
&& $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1 |
985 |
RET_COMPILE=$? |
RET_COMPILE=$? |
986 |
|
cat genmake_tnc.log >> genmake_warnings |
987 |
if test "x$RET_COMPILE" = x0 ; then |
if test "x$RET_COMPILE" = x0 ; then |
988 |
LIBS="$LIBS -lnetcdf" |
LIBS="$LIBS -lnetcdf" |
989 |
HAVE_NETCDF=t |
HAVE_NETCDF=t |
990 |
else |
else |
991 |
|
# try again with "-lnetcdff" added to the libs |
992 |
|
echo "try again with added '-lnetcdff -lnetcdf'" > genmake_tnc.log |
993 |
|
echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log |
994 |
|
echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log |
995 |
|
echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log |
996 |
|
cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \ |
997 |
|
&& $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \ |
998 |
|
&& $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdff -lnetcdf >> genmake_tnc.log 2>&1 |
999 |
|
RET_COMPILE=$? |
1000 |
cat genmake_tnc.log >> genmake_warnings |
cat genmake_tnc.log >> genmake_warnings |
1001 |
|
if test "x$RET_COMPILE" = x0 ; then |
1002 |
|
LIBS="$LIBS -lnetcdff -lnetcdf" |
1003 |
|
HAVE_NETCDF=t |
1004 |
|
fi |
1005 |
fi |
fi |
1006 |
fi |
fi |
1007 |
rm -f genmake_tnc* |
rm -f genmake_tnc* |
1037 |
INCLUDES="-I. $INCLUDES" |
INCLUDES="-I. $INCLUDES" |
1038 |
FFLAGS= |
FFLAGS= |
1039 |
FOPTIM= |
FOPTIM= |
1040 |
|
FEXTRAFLAGS= |
1041 |
CFLAGS= |
CFLAGS= |
1042 |
KFLAGS1= |
KFLAGS1= |
1043 |
KFLAGS2= |
KFLAGS2= |
1048 |
NOOPTFLAGS= |
NOOPTFLAGS= |
1049 |
MPI= |
MPI= |
1050 |
MPIPATH= |
MPIPATH= |
1051 |
|
TS= |
1052 |
|
PAPIS= |
1053 |
|
PCLS= |
1054 |
|
FOOLAD= |
1055 |
|
PAPI= |
1056 |
|
PCL= |
1057 |
|
HPMT= |
1058 |
|
GSL= |
1059 |
|
DEVEL= |
1060 |
|
HAVE_TEST_L= |
1061 |
|
|
1062 |
# DEFINES checked by test compilation or command-line |
# DEFINES checked by test compilation or command-line |
1063 |
HAVE_SYSTEM= |
HAVE_SYSTEM= |
1064 |
HAVE_FDATE= |
HAVE_FDATE= |
1065 |
FC_NAMEMANGLE= |
FC_NAMEMANGLE= |
1066 |
HAVE_CLOC= |
HAVE_CLOC= |
1067 |
|
# HAVE_SETRLSTK= |
1068 |
HAVE_STAT= |
HAVE_STAT= |
1069 |
HAVE_NETCDF= |
HAVE_NETCDF= |
1070 |
HAVE_ETIME= |
HAVE_ETIME= |
1081 |
PWD=`pwd` |
PWD=`pwd` |
1082 |
test "x$MAKE" = x && MAKE=make |
test "x$MAKE" = x && MAKE=make |
1083 |
test "x$AWK" = x && AWK=awk |
test "x$AWK" = x && AWK=awk |
1084 |
|
EMBED_SRC= |
1085 |
THISHOST=`hostname` |
THISHOST=`hostname` |
1086 |
THISCWD=`pwd` |
THISCWD=`pwd` |
1087 |
THISDATE=`date` |
THISDATE=`date` |
1115 |
|
|
1116 |
# The following state can be set directly by command-line switches |
# The following state can be set directly by command-line switches |
1117 |
gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE" |
gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE" |
1118 |
gm_s2="FC CPP IEEE MPI JAM DUMPSTATE STANDARDDIRS" |
gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL DEVEL MPI JAM DUMPSTATE STANDARDDIRS" |
1119 |
|
|
1120 |
# The following state is not directly set by command-line switches |
# The following state is not directly set by command-line switches |
1121 |
gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM " |
gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM FEXTRAFLAGS" |
1122 |
gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS" |
gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS" |
1123 |
gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE" |
gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE" |
1124 |
gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF" |
gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF" |
1295 |
-noieee | --noieee) |
-noieee | --noieee) |
1296 |
IEEE= ;; |
IEEE= ;; |
1297 |
|
|
1298 |
|
-ts | --ts) |
1299 |
|
TS=true ;; |
1300 |
|
-papis | --papis) |
1301 |
|
PAPIS=true ;; |
1302 |
|
-pcls | --pcls) |
1303 |
|
PCLS=true ;; |
1304 |
|
-foolad | --foolad) |
1305 |
|
FOOLAD=true ;; |
1306 |
|
-papi | --papi) |
1307 |
|
PAPI=true ;; |
1308 |
|
-pcl | --pcl) |
1309 |
|
PCL=true ;; |
1310 |
|
-hpmt | --hpmt) |
1311 |
|
HPMT=true ;; |
1312 |
|
|
1313 |
|
-gsl | --gsl) |
1314 |
|
GSL=true ;; |
1315 |
|
|
1316 |
|
-devel | --devel) |
1317 |
|
DEVEL=true ;; |
1318 |
|
|
1319 |
-mpi | --mpi) |
-mpi | --mpi) |
1320 |
MPI=true ;; |
MPI=true ;; |
1321 |
-mpi=* | --mpi=*) |
-mpi=* | --mpi=*) |
1343 |
-ignoretime | -ignore_time | --ignoretime | --ignore_time) |
-ignoretime | -ignore_time | --ignoretime | --ignore_time) |
1344 |
IGNORE_TIME="-DIGNORE_TIME" ;; |
IGNORE_TIME="-DIGNORE_TIME" ;; |
1345 |
|
|
1346 |
|
-es | --es | -embed-source | --embed-source) |
1347 |
|
EMBED_SRC=t ;; |
1348 |
|
|
1349 |
-*) |
-*) |
1350 |
echo "Error: unrecognized option: "$ac_option |
echo "Error: unrecognized option: "$ac_option |
1351 |
usage |
usage |
1364 |
if test -f ./.genmakerc ; then |
if test -f ./.genmakerc ; then |
1365 |
echo |
echo |
1366 |
echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\"" |
echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\"" |
1367 |
echo " file. This file format is no longer supported. Please see:" |
echo " file. This file format is no longer supported. For directions on" |
1368 |
echo |
echo " how to setup and use the new \"genmake2\" script, please see:" |
1369 |
echo " http://mitgcm.org/devel_HOWTO/" |
echo " http://mitgcm.org/devel_HOWTO/" |
1370 |
echo |
echo " and send an email to MITgcm-support@mitgcm.org if you need help." |
1371 |
echo " for directions on how to setup and use the new \"genmake2\" input" |
echo "WARNING: ignore \"./.genmakerc\" and continue." |
|
echo " files and send an email to MITgcm-support@mitgcm.org if you want help." |
|
1372 |
echo |
echo |
1373 |
fi |
fi |
1374 |
|
|
1375 |
# Find the MITgcm ${ROOTDIR} |
# Find the MITgcm ${ROOTDIR} |
1376 |
if test "x${ROOTDIR}" = x ; then |
if test "x${ROOTDIR}" = x ; then |
1377 |
tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'` |
tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'` |
1378 |
if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then |
if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesupp -a -d ../pkg ; then |
1379 |
ROOTDIR=".." |
ROOTDIR=".." |
1380 |
else |
else |
1381 |
for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do |
for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do |
1543 |
EOF |
EOF |
1544 |
exit 1 |
exit 1 |
1545 |
fi |
fi |
1546 |
|
test -L genmake_tlink > /dev/null 2>&1 |
1547 |
|
RETVAL=$? |
1548 |
|
if test "x$RETVAL" = x0 ; then |
1549 |
|
HAVE_TEST_L=t |
1550 |
|
fi |
1551 |
rm -f genmake_test_ln genmake_tlink |
rm -f genmake_test_ln genmake_tlink |
1552 |
|
|
1553 |
# Check for broken *.F/*.f handling and fix if possible |
# Check for broken *.F/*.f handling and fix if possible |
1558 |
DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI" |
DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI" |
1559 |
fi |
fi |
1560 |
|
|
1561 |
|
if test ! "x$TS" = x ; then |
1562 |
|
echo " Turning on timing per timestep" |
1563 |
|
if test ! "x$FOOLAD" = x ; then |
1564 |
|
DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP" |
1565 |
|
else |
1566 |
|
DEFINES="$DEFINES -DTIME_PER_TIMESTEP" |
1567 |
|
fi |
1568 |
|
PACKAGES="$PACKAGES showflops" |
1569 |
|
fi |
1570 |
|
if test ! "x$PAPIS" = x ; then |
1571 |
|
echo " Turning on PAPI flop summary per timestep" |
1572 |
|
echo " Please make sure PAPIINC, PAPILIB are defined" |
1573 |
|
if test ! "x$FOOLAD" = x ; then |
1574 |
|
DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP" |
1575 |
|
else |
1576 |
|
DEFINES="$DEFINES -DUSE_PAPI_FLOPS" |
1577 |
|
fi |
1578 |
|
INCLUDES="$INCLUDES $PAPIINC" |
1579 |
|
LIBS="$LIBS $PAPILIB" |
1580 |
|
PACKAGES="$PACKAGES showflops" |
1581 |
|
fi |
1582 |
|
if test ! "x$PCLS" = x ; then |
1583 |
|
echo " Turning on PCL counter summary per timestep" |
1584 |
|
echo " Please make sure PCLINC, PCLLIB are defined" |
1585 |
|
if test ! "x$FOOLAD" = x ; then |
1586 |
|
DEFINES="$DEFINES -DUSE_PCL_FLOPS_SFP" |
1587 |
|
else |
1588 |
|
DEFINES="$DEFINES -DUSE_PCL_FLOPS" |
1589 |
|
fi |
1590 |
|
INCLUDES="$INCLUDES $PCLINC" |
1591 |
|
LIBS="$LIBS $PCLLIB" |
1592 |
|
PACKAGES="$PACKAGES showflops" |
1593 |
|
fi |
1594 |
|
if test ! "x$PAPI" = x ; then |
1595 |
|
if test ! "x$PAPIS" = x ; then |
1596 |
|
echo " PAPI performance analysis and flop summary per timestep cannot co-exist!" |
1597 |
|
echo " Sticking with PAPI flop summary per timestep!" |
1598 |
|
else |
1599 |
|
echo " Turning on performance analysis with PAPI" |
1600 |
|
echo " Please make sure PAPIINC, PAPILIB are defined" |
1601 |
|
DEFINES="$DEFINES -DUSE_PAPI" |
1602 |
|
INCLUDES="$INCLUDES $PAPIINC" |
1603 |
|
LIBS="$LIBS $PAPILIB" |
1604 |
|
fi |
1605 |
|
fi |
1606 |
|
if test ! "x$PCL" = x ; then |
1607 |
|
if test ! "x$PCLS" = x ; then |
1608 |
|
echo " PCL performance analysis and flop summary per timestep cannot co-exist!" |
1609 |
|
echo " Sticking with PCL flop summary per timestep!" |
1610 |
|
else |
1611 |
|
echo " Turning on performance analysis with PCL" |
1612 |
|
echo " Please make sure PCLINC, PCLLIB are defined" |
1613 |
|
DEFINES="$DEFINES -DUSE_PCL" |
1614 |
|
INCLUDES="$INCLUDES $PCLINC" |
1615 |
|
LIBS="$LIBS $PCLLIB" |
1616 |
|
fi |
1617 |
|
fi |
1618 |
|
if test ! "x$HPMT" = x ; then |
1619 |
|
if test ! "x$PAPI" = x ; then |
1620 |
|
echo " PAPI and the HPM Toolkit cannot co-exist!" |
1621 |
|
echo " Sticking with PAPI!" |
1622 |
|
else if test ! "x$PCL" = x ; then |
1623 |
|
echo " PCL and the HPM Toolkit cannot co-exist!" |
1624 |
|
echo " Sticking with PCL!" |
1625 |
|
else |
1626 |
|
echo " Turning on performance analysis with the HPM Toolkit" |
1627 |
|
echo " Please make sure HPMTINC, HPMTLIB are defined" |
1628 |
|
DEFINES="$DEFINES -DUSE_LIBHPM" |
1629 |
|
INCLUDES="$INCLUDES $HPMTINC" |
1630 |
|
LIBS="$LIBS $HPMTLIB" |
1631 |
|
fi |
1632 |
|
fi |
1633 |
|
fi |
1634 |
|
if test ! "x$GSL" = x ; then |
1635 |
|
echo " Turning on use of GSL to control floating point calculations" |
1636 |
|
echo " Please make sure GSLINC, GSLLIB are defined" |
1637 |
|
DEFINES="$DEFINES -DUSE_GSL_IEEE" |
1638 |
|
INCLUDES="$INCLUDES $GSLINC" |
1639 |
|
LIBS="$LIBS $GSLLIB" |
1640 |
|
fi |
1641 |
|
|
1642 |
printf "\n=== Checking system libraries ===\n" |
printf "\n=== Checking system libraries ===\n" |
1643 |
printf " Do we have the system() command using $FC... " |
printf " Do we have the system() command using $FC... " |
1644 |
cat > genmake_tcomp.$FS <<EOF |
cat > genmake_tcomp.$FS <<EOF |
1646 |
call system('echo hi') |
call system('echo hi') |
1647 |
end |
end |
1648 |
EOF |
EOF |
1649 |
$FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1 |
$FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1 |
1650 |
RETVAL=$? |
RETVAL=$? |
1651 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
1652 |
HAVE_SYSTEM=t |
HAVE_SYSTEM=t |
1661 |
printf " Do we have the fdate() command using $FC... " |
printf " Do we have the fdate() command using $FC... " |
1662 |
cat > genmake_tcomp.$FS <<EOF |
cat > genmake_tcomp.$FS <<EOF |
1663 |
program hello |
program hello |
1664 |
CHARACTER(128) string |
CHARACTER*(128) string |
1665 |
string = ' ' |
string = ' ' |
1666 |
call fdate( string ) |
call fdate( string ) |
1667 |
print *, string |
print *, string |
1668 |
end |
end |
1669 |
EOF |
EOF |
1670 |
$FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1 |
$FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1 |
1671 |
RETVAL=$? |
RETVAL=$? |
1672 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
1673 |
HAVE_FDATE=t |
HAVE_FDATE=t |
1689 |
print *, tarray |
print *, tarray |
1690 |
end |
end |
1691 |
EOF |
EOF |
1692 |
$FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1 |
$FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1 |
1693 |
RETVAL=$? |
RETVAL=$? |
1694 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
1695 |
HAVE_ETIME=t |
HAVE_ETIME=t |
1707 |
echo "yes" |
echo "yes" |
1708 |
else |
else |
1709 |
echo "no" |
echo "no" |
1710 |
|
if test "x$EMBED_SRC" = xt ; then |
1711 |
|
echo " WARNING: you requested file embedding but it has" |
1712 |
|
echo " been disabled since C code cannot be called" |
1713 |
|
EMBED_SRC= |
1714 |
|
fi |
1715 |
|
fi |
1716 |
|
rm -f genmake_t* |
1717 |
|
|
1718 |
|
printf " Can we unlimit the stack size using $FC... " |
1719 |
|
check_HAVE_SETRLSTK |
1720 |
|
if test "x$HAVE_SETRLSTK" = xt ; then |
1721 |
|
echo "yes" |
1722 |
|
else |
1723 |
|
echo "no" |
1724 |
|
fi |
1725 |
|
rm -f genmake_t* |
1726 |
|
|
1727 |
|
printf " Can we register a signal handler using $FC... " |
1728 |
|
check_HAVE_SIGREG |
1729 |
|
if test "x$HAVE_SIGREG" = xt ; then |
1730 |
|
echo "yes" |
1731 |
|
else |
1732 |
|
echo "no" |
1733 |
fi |
fi |
1734 |
rm -f genmake_t* |
rm -f genmake_t* |
1735 |
|
|
1751 |
fi |
fi |
1752 |
DEFINES="$DEFINES $IGNORE_TIME" |
DEFINES="$DEFINES $IGNORE_TIME" |
1753 |
|
|
1754 |
|
if test "x$EMBED_SRC" = xt ; then |
1755 |
|
build_embed_encode |
1756 |
|
fi |
1757 |
|
if test "x$EMBED_SRC" = xt ; then |
1758 |
|
ENABLE="$ENABLE embed_files" |
1759 |
|
fi |
1760 |
|
|
1761 |
|
|
1762 |
printf "\n=== Setting defaults ===\n" |
printf "\n=== Setting defaults ===\n" |
1763 |
printf " Adding MODS directories: " |
printf " Adding MODS directories: " |
1764 |
for d in $MODS ; do |
for d in $MODS ; do |
1844 |
fi |
fi |
1845 |
fi |
fi |
1846 |
|
|
1847 |
#same for exch2 |
#same for pkg/exch2 and pkg/regrid |
1848 |
if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then |
for pdir in exch2 regrid ; do |
1849 |
echo " Making source files in exch2 from templates" |
if test -r $ROOTDIR"/pkg/${pdir}/Makefile" ; then |
1850 |
( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1 |
echo " Making source files in pkg/${pdir} from templates" |
1851 |
RETVAL=$? |
( cd $ROOTDIR"/pkg/"${pdir} && $MAKE ) > make_${pdir}.errors 2>&1 |
1852 |
if test "x${RETVAL}" = x0 ; then |
RETVAL=$? |
1853 |
rm -f make_exch2.errors |
if test "x${RETVAL}" = x0 ; then |
1854 |
else |
rm -f make_${pdir}.errors |
1855 |
echo "Error: problem encountered while building source files in exch2:" |
else |
1856 |
cat make_exch2.errors 1>&2 |
echo "Error: problem encountered while building source files in pkg/${pdir}:" |
1857 |
exit 1 |
cat make_${pdir}.errors 1>&2 |
1858 |
|
exit 1 |
1859 |
|
fi |
1860 |
fi |
fi |
1861 |
fi |
done |
1862 |
|
|
1863 |
printf "\n=== Determining package settings ===\n" |
printf "\n=== Determining package settings ===\n" |
1864 |
if test "x${PDEPEND}" = x ; then |
if test "x${PDEPEND}" = x ; then |
1969 |
rm -f ./.tmp_pack |
rm -f ./.tmp_pack |
1970 |
echo " packages are: $PACKAGES" |
echo " packages are: $PACKAGES" |
1971 |
|
|
1972 |
# Check availability of NetCDF and then either build the MNC template |
# Check for package MNC: if NetCDF is available, then build the MNC |
1973 |
# files or delete mnc from the list of available packages. |
# template files ; otherwise, delete mnc from the list of packages. |
1974 |
echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1 |
echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1 |
1975 |
RETVAL=$? |
RETVAL=$? |
1976 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
2004 |
fi |
fi |
2005 |
fi |
fi |
2006 |
|
|
2007 |
|
# Check for package PROFILES: if NetCDF is not available, |
2008 |
|
# then delete profiles from the list of available packages. |
2009 |
|
echo $PACKAGES | grep ' profiles ' > /dev/null 2>&1 |
2010 |
|
RETVAL=$? |
2011 |
|
if test "x$RETVAL" = x0 ; then |
2012 |
|
if test "x$HAVE_NETCDF" != xt ; then |
2013 |
|
cat <<EOF |
2014 |
|
|
2015 |
|
********************************************************************* |
2016 |
|
WARNING: the "profiles" package was enabled but tests failed to |
2017 |
|
compile NetCDF applications. Please check that: |
2018 |
|
|
2019 |
|
1) NetCDF is correctly installed for this compiler and |
2020 |
|
2) the LIBS variable (within the "optfile") specifies the correct |
2021 |
|
NetCDF library to link against. |
2022 |
|
|
2023 |
|
Due to this failure, the "profiles" package is now DISABLED. |
2024 |
|
********************************************************************* |
2025 |
|
|
2026 |
|
EOF |
2027 |
|
PACKAGES=`echo $PACKAGES | sed -e 's/profiles//g'` |
2028 |
|
DISABLE="$DISABLE profiles" |
2029 |
|
fi |
2030 |
|
fi |
2031 |
|
|
2032 |
echo " applying package dependency rules" |
echo " applying package dependency rules" |
2033 |
ck= |
ck= |
2034 |
while test "x$ck" != xtt ; do |
while test "x$ck" != xtt ; do |
2035 |
i=0 |
i=0 |
2036 |
# rtot=${#PNAME[@]} |
# rtot=${#PNAME[@]} |
2037 |
rtot=$nname |
rtot=$nname |
2038 |
while test $i -lt $rtot ; do |
while test $i -le $rtot ; do |
2039 |
|
|
2040 |
# Is $pname in the current $PACKAGES list? |
# Is $pname in the current $PACKAGES list? |
2041 |
# pname=${PNAME[$i]} |
# pname=${PNAME[$i]} |
2069 |
|
|
2070 |
# Do we need to add $dname according to the dependency rules? |
# Do we need to add $dname according to the dependency rules? |
2071 |
if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then |
if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then |
2072 |
|
#echo " " $pname ": need to add :" $dname |
2073 |
in_dis="f" |
in_dis="f" |
2074 |
for dis in $DISABLE ; do |
for dis in $DISABLE ; do |
2075 |
if test "x$dis" = "x$dname" ; then |
if test "x$dis" = "x$dname" ; then |
2238 |
fi |
fi |
2239 |
done |
done |
2240 |
|
|
2241 |
|
if test ! "x$DIVA" = x ; then |
2242 |
|
echo " Creating the pseudo-MPI include directory" |
2243 |
|
INCLUDES="-I./mpi_headers $INCLUDES" |
2244 |
|
rm -rf ./mpi_headers |
2245 |
|
mkdir -p ./mpi_headers |
2246 |
|
|
2247 |
|
if test "x$MPIINCLUDEDIR" = x ; then |
2248 |
|
if test "x$MPIHOME" = x ; then |
2249 |
|
MPIHOME='/usr' |
2250 |
|
fi |
2251 |
|
MPIINCLUDEDIR='$MPIHOME/include' |
2252 |
|
fi |
2253 |
|
|
2254 |
|
if test -r $MPIINCLUDEDIR/mpif.h ; then |
2255 |
|
for i in $MPI_HEADER_FILES; do |
2256 |
|
cp -p $MPIINCLUDEDIR/$i ./mpi_headers |
2257 |
|
done |
2258 |
|
|
2259 |
|
perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h |
2260 |
|
else |
2261 |
|
echo " We cannot create a copy of mpif.h!" |
2262 |
|
# exit -1 |
2263 |
|
fi |
2264 |
|
fi |
2265 |
|
|
2266 |
echo " Determining the list of source and include files" |
echo " Determining the list of source and include files" |
2267 |
rm -rf .links.tmp |
rm -rf .links.tmp |
2268 |
mkdir .links.tmp |
mkdir .links.tmp |
2269 |
|
touch .links.tmp/foo |
2270 |
|
if test ! -r ".links.tmp/foo" ; then |
2271 |
|
echo |
2272 |
|
echo "ERROR : something is wrong with your directory permissions or" |
2273 |
|
echo " your user file-creation mask (\"umask\") since creating a" |
2274 |
|
echo " sub-dir, touch-ing a file within it, and then reading it is" |
2275 |
|
echo " not working. Please try setting your umask to something" |
2276 |
|
echo " sane such as:" |
2277 |
|
echo |
2278 |
|
echo " umask 0002" |
2279 |
|
echo |
2280 |
|
echo " and please verify that you have the proper permissions for" |
2281 |
|
echo " creating sub-directories and then reading files created" |
2282 |
|
echo " within them." |
2283 |
|
echo |
2284 |
|
exit 1 |
2285 |
|
fi |
2286 |
|
rm -f .links.tmp/foo |
2287 |
echo "# This section creates symbolic links" > srclinks.tmp |
echo "# This section creates symbolic links" > srclinks.tmp |
2288 |
echo "" >> srclinks.tmp |
echo "" >> srclinks.tmp |
2289 |
printf 'SRCFILES = ' > srclist.inc |
printf 'SRCFILES = ' > srclist.inc |
2299 |
for sf in $sfiles ; do |
for sf in $sfiles ; do |
2300 |
if test ! -r ".links.tmp/$sf" ; then |
if test ! -r ".links.tmp/$sf" ; then |
2301 |
if test -f "$d/$sf" ; then |
if test -f "$d/$sf" ; then |
2302 |
|
ignore_f=f |
2303 |
case $d/$sf in |
case $d/$sf in |
2304 |
./$PACKAGES_DOT_H) |
./$PACKAGES_DOT_H) |
2305 |
|
ignore_f=t |
2306 |
;; |
;; |
2307 |
./AD_CONFIG.h) |
./AD_CONFIG.h) |
2308 |
|
ignore_f=t |
2309 |
;; |
;; |
2310 |
./FC_NAMEMANGLE.h) |
./FC_NAMEMANGLE.h) |
2311 |
|
ignore_f=t |
2312 |
;; |
;; |
2313 |
./BUILD_INFO.h) |
./BUILD_INFO.h) |
2314 |
|
ignore_f=t |
2315 |
|
;; |
2316 |
|
./EMBEDDED_FILES.h) |
2317 |
|
ignore_f=t |
2318 |
;; |
;; |
2319 |
*) |
*) |
2320 |
touch .links.tmp/$sf |
# For the local directory *ONLY*, |
2321 |
deplist="$deplist $sf" |
# ignore all soft-links |
2322 |
|
if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then |
2323 |
|
ignore_f=t |
2324 |
|
else |
2325 |
|
touch .links.tmp/$sf |
2326 |
|
deplist="$deplist $sf" |
2327 |
|
fi |
2328 |
;; |
;; |
2329 |
esac |
esac |
2330 |
extn=`echo $sf | $AWK -F. '{print $NF}'` |
if test "x$ignore_f" = xf ; then |
2331 |
case $extn in |
extn=`echo $sf | $AWK -F. '{print $NF}'` |
2332 |
F) |
case $extn in |
2333 |
echo " \\" >> srclist.inc |
F) |
2334 |
printf " $sf" >> srclist.inc |
echo " \\" >> srclist.inc |
2335 |
;; |
printf " $sf" >> srclist.inc |
2336 |
F90) |
;; |
2337 |
echo " \\" >> f90srclist.inc |
F90) |
2338 |
printf " $sf" >> f90srclist.inc |
echo " \\" >> f90srclist.inc |
2339 |
;; |
printf " $sf" >> f90srclist.inc |
2340 |
c) |
;; |
2341 |
echo " \\" >> csrclist.inc |
c) |
2342 |
printf " $sf" >> csrclist.inc |
echo " \\" >> csrclist.inc |
2343 |
;; |
printf " $sf" >> csrclist.inc |
2344 |
h) |
;; |
2345 |
echo " \\" >> hlist.inc |
h) |
2346 |
printf " $sf" >> hlist.inc |
echo " \\" >> hlist.inc |
2347 |
;; |
printf " $sf" >> hlist.inc |
2348 |
flow) |
;; |
2349 |
echo " \\" >> ad_flow_files.inc |
flow) |
2350 |
printf " $sf" >> ad_flow_files.inc |
echo " \\" >> ad_flow_files.inc |
2351 |
;; |
printf " $sf" >> ad_flow_files.inc |
2352 |
esac |
;; |
2353 |
|
esac |
2354 |
|
fi |
2355 |
fi |
fi |
2356 |
fi |
fi |
2357 |
done |
done |
2427 |
|
|
2428 |
# These files are created by Makefile |
# These files are created by Makefile |
2429 |
SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h |
SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h |
|
|
|
2430 |
EOF |
EOF |
2431 |
|
|
2432 |
# Note: figure out some way to add Hyades JAM libraries here |
if test "x$EMBED_SRC" = xt ; then |
2433 |
|
echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE |
2434 |
|
else |
2435 |
|
echo "EMBEDDED_FILES = " >>$MAKEFILE |
2436 |
|
fi |
2437 |
|
|
2438 |
|
# Note: figure out some way to add Hyades JAM libraries here |
2439 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
2440 |
# Unix ln (link) |
# Unix ln (link) |
2441 |
LN = ${LN} |
LN = ${LN} |
2462 |
KFLAGS1 = ${KFLAGS1} |
KFLAGS1 = ${KFLAGS1} |
2463 |
KFLAGS2 = ${KFLAGS2} |
KFLAGS2 = ${KFLAGS2} |
2464 |
# Optim./debug for FC |
# Optim./debug for FC |
2465 |
FFLAGS = ${FFLAGS} |
FFLAGS = ${FFLAGS} ${FEXTRAFLAGS} |
2466 |
FOPTIM = ${FOPTIM} |
FOPTIM = ${FOPTIM} |
2467 |
# Optim./debug for FC |
# Optim./debug for FC |
2468 |
F90FLAGS = ${F90FLAGS} |
F90FLAGS = ${F90FLAGS} |
2486 |
cat ad_flow_files.inc >> $MAKEFILE |
cat ad_flow_files.inc >> $MAKEFILE |
2487 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
2488 |
echo 'F77FILES = $(SRCFILES:.F=.'$FS')' >> $MAKEFILE |
echo 'F77FILES = $(SRCFILES:.F=.'$FS')' >> $MAKEFILE |
2489 |
echo 'F90FILES = $(F90SRCFILES:.F=.'$FS90')' >> $MAKEFILE |
echo 'F90FILES = $(F90SRCFILES:.F90=.'$FS90')' >> $MAKEFILE |
2490 |
echo 'OBJFILES = $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE |
echo 'OBJFILES = $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE |
2491 |
echo >> $MAKEFILE |
echo >> $MAKEFILE |
2492 |
echo '.SUFFIXES:' >> $MAKEFILE |
echo '.SUFFIXES:' >> $MAKEFILE |
2497 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
2498 |
|
|
2499 |
all: \$(EXECUTABLE) |
all: \$(EXECUTABLE) |
2500 |
\$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES) |
\$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES) \$(EMBEDDED_FILES) |
2501 |
@echo Creating \$@ ... |
@echo Creating \$@ ... |
2502 |
\$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS) |
\$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS) |
2503 |
depend: |
depend: |
2506 |
\$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE) |
\$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE) |
2507 |
-rm -f makedepend.out |
-rm -f makedepend.out |
2508 |
|
|
2509 |
|
lib: libmitgcmuv.a |
2510 |
|
|
2511 |
|
libmitgcmuv.a: \$(OBJFILES) |
2512 |
|
ar rcv libmitgcmuv.a \$(OBJFILES) |
2513 |
|
ar d libmitgcmuv.a main.o |
2514 |
|
|
2515 |
links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES) |
links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES) |
2516 |
|
|
2517 |
small_f: \$(F77FILES) \$(F90FILES) |
small_f: \$(F77FILES) \$(F90FILES) |
2521 |
@\$(EXECUTABLE) > \$@ |
@\$(EXECUTABLE) > \$@ |
2522 |
|
|
2523 |
clean: |
clean: |
2524 |
-rm -rf *.o *.$FS *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template |
-rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template |
2525 |
|
-rm -rf *.o |
2526 |
|
-rm -rf *.$FS |
2527 |
Clean: |
Clean: |
2528 |
@make clean |
@make clean |
2529 |
@make cleanlinks |
@make cleanlinks |
2534 |
-find \$(EXEDIR) -name "*.meta" -exec rm {} \; |
-find \$(EXEDIR) -name "*.meta" -exec rm {} \; |
2535 |
-find \$(EXEDIR) -name "*.data" -exec rm {} \; |
-find \$(EXEDIR) -name "*.data" -exec rm {} \; |
2536 |
-find \$(EXEDIR) -name "fort.*" -exec rm {} \; |
-find \$(EXEDIR) -name "fort.*" -exec rm {} \; |
2537 |
-rm -f \$(EXECUTABLE) output.txt STD* |
-rm -f \$(EXECUTABLE) \$(EXE_AD) *.txt STD* *diagnostics.log datetime |
2538 |
|
-rm -rf mnc_test_* |
2539 |
|
|
2540 |
#eh3 Makefile: makefile |
#eh3 Makefile: makefile |
2541 |
makefile: |
makefile: |
2563 |
test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE |
test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE |
2564 |
test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE |
test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE |
2565 |
|
|
2566 |
|
if test "x$EMBED_SRC" = xt ; then |
2567 |
|
cat >>$MAKEFILE <<EOF |
2568 |
|
|
2569 |
|
decode_files.o : EMBEDDED_FILES.h |
2570 |
|
|
2571 |
|
## \$(F77FILES) |
2572 |
|
all_fF.tar.gz : \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile |
2573 |
|
@echo Creating \$@ ... |
2574 |
|
-tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile |
2575 |
|
-rm -f all_fF.tar.gz |
2576 |
|
-gzip all_fF.tar |
2577 |
|
|
2578 |
|
EMBEDDED_FILES.h : all_fF.tar.gz |
2579 |
|
@echo Creating \$@ ... |
2580 |
|
-\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz |
2581 |
|
|
2582 |
|
EOF |
2583 |
|
fi |
2584 |
|
|
2585 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
2586 |
|
|
2587 |
# The normal chain of rules is ( .F - .$FS - .o ) |
# The normal chain of rules is ( .F - .$FS - .o ) |
2593 |
\$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ |
\$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ |
2594 |
.$FS.o: |
.$FS.o: |
2595 |
\$(FC) \$(FFLAGS) \$(FOPTIM) -c \$< |
\$(FC) \$(FFLAGS) \$(FOPTIM) -c \$< |
2596 |
.F90.$FS90: |
.F90.o: |
|
\$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ |
|
|
.$FS90.o: |
|
2597 |
\$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$< |
\$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$< |
2598 |
.c.o: |
.c.o: |
2599 |
\$(CC) \$(CFLAGS) -c \$< |
\$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$< |
2600 |
|
|
2601 |
# Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain |
# Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain |
2602 |
.F.p: |
.F.p: |
2620 |
ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS" |
ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS" |
2621 |
for i in $ad_vars ; do |
for i in $ad_vars ; do |
2622 |
name=$i |
name=$i |
2623 |
t1="t2=\$"`echo $i` |
t1="t2=\$"`echo "$i"` |
2624 |
eval $t1 |
eval $t1 |
2625 |
printf "%-20s = " $name >> $MAKEFILE |
printf "%-20s = " $name >> $MAKEFILE |
2626 |
echo $t2 >> $MAKEFILE |
echo "$t2" | sed -e 's| \+| |g' >> $MAKEFILE |
2627 |
done |
done |
2628 |
|
|
2629 |
echo " Add the source list for AD code generation" |
echo " Add the source list for AD code generation" |
2640 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
2641 |
|
|
2642 |
# ... AD ... |
# ... AD ... |
2643 |
adall: ad_taf |
adall: \$(EXE_AD) |
2644 |
adtaf: ad_taf_output.$FS |
adtaf: ad_taf_output.$FS |
2645 |
adtamc: ad_tamc_output.$FS |
adtamc: ad_tamc_output.$FS |
2646 |
|
|
2660 |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS |
2661 |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS |
2662 |
|
|
2663 |
ad_taf: ad_taf_output.o \$(OBJFILES) |
\${EXE_AD}: ad_taf_output.o \$(OBJFILES) |
2664 |
\$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS) |
\$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS) |
2665 |
|
|
2666 |
ad_tamc_output.$FS: ad_input_code.$FS |
ad_tamc_output.$FS: ad_input_code.$FS |
2667 |
\$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS |
\$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS |