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revision 1.21 by edhill, Wed Oct 22 18:00:49 2003 UTC revision 1.43 by edhill, Sun Nov 23 20:01:50 2003 UTC
# Line 1  Line 1 
1  #!/bin/bash  #!/bin/sh
2  #  #
3  # $Header$  # $Header$
4  #  #
# Line 72  find_possible_configs()  { Line 72  find_possible_configs()  {
72    
73      tmp1=`uname`"_"`uname -m`      tmp1=`uname`"_"`uname -m`
74      tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`      tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
75      PLATFORM=`echo $tmp2 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
76        PLATFORM=`echo $tmp3 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
77      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
78      echo "  The platform appears to be:  $PLATFORM"      echo "  The platform appears to be:  $PLATFORM"
 #     if test "x$OFLIST" = x ; then  
 #       echo "  No pre-defined options files were found matching this platform"  
 #       echo "  but examples for other platforms can be found in:"  
 #       echo "    $ROOTDIR/tools/build_options"  
 #     else  
 #       echo "  Options files (located in $ROOTDIR/tools/build_options) that"  
 #       echo "  may work with this machine are:"  
 #       for i in $OFLIST ; do  
 #           echo "    $i"  
 #       done  
 #     fi  
79            
80      echo "test" > test      echo "test" > test
81      ln -s ./test link      ln -s ./test link
# Line 103  find_possible_configs()  { Line 93  find_possible_configs()  {
93          CPP="cpp -traditional -P"          CPP="cpp -traditional -P"
94      fi      fi
95    
96        # makedepend is not always available
97        if test "x${MAKEDEPEND}" = x ; then
98          which makedepend >& /dev/null
99          RETVAL=$?
100          if test "x${RETVAL}" = x1 ; then
101             echo "    makedepend was not found. Using xmakedpend instead."
102             MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
103          fi
104        fi
105    
106      # look for possible fortran compilers      # look for possible fortran compilers
107      tmp="$MITGCM_FC $FC g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95"      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95"
108      p_FC=      p_FC=
109      for c in $tmp ; do      for c in $tmp ; do
110          rm -f ./hello.f ./hello          rm -f ./hello.f ./hello
# Line 205  get_pdepend_list()  { Line 205  get_pdepend_list()  {
205      cat $1 | sed -e 's/#.*$//g' \      cat $1 | sed -e 's/#.*$//g' \
206          | $AWK 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \          | $AWK 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \
207          > ./.pd_tmp          > ./.pd_tmp
208      source ./.pd_tmp      . ./.pd_tmp
209      rm -f ./.pd_tmp      rm -f ./.pd_tmp
210    
211      echo -n "PNAME = "${}      echo -n "PNAME = "${}
# Line 214  get_pdepend_list()  { Line 214  get_pdepend_list()  {
214    
215  #  Explain usage  #  Explain usage
216  usage()  {  usage()  {
217      echo  cat <<EOF
218      echo "Usage: "$0" [OPTIONS]"  
219      echo "  where [OPTIONS] can be:"  Usage: "$0" [OPTIONS]
220      echo    where [OPTIONS] can be:
221      echo "    -help | --help | -h | --h"  
222      echo "    -nooptfile | --nooptfile"      -help | --help | -h | --h
223      echo "      -optfile NAME | --optfile NAME | -of NAME | --of NAME"            Print this help message and exit.
224      echo "      -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME"  
225      echo "    -pdepend NAME | --pdepend NAME"      -nooptfile | --nooptfile
226      echo "      -pdepend=NAME | --pdepend=NAME"        -optfile NAME | --optfile NAME | -of NAME | --of NAME
227      echo "    -pdefault NAME | --pdefault NAME"        -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
228      echo "      -pdefault=NAME | --pdefault=NAME"            Use "NAME" as the optfile.  By default, an attempt will be
229      echo "    -make NAME | -m NAME"            made to find an appropriate "standard" optfile in the
230      echo "      --make=NAME | -m=NAME"            tools/build_options/ directory.
231      echo "    -makefile NAME | -mf NAME"  
232      echo "      --makefile=NAME | -mf=NAME"      -pdepend NAME | --pdepend NAME
233      echo "    -platform NAME | --platform NAME | -pl NAME | --pl NAME"        -pdepend=NAME | --pdepend=NAME
234      echo "      -platform=NAME | --platform=NAME | -pl=NAME | --pl=NAME"            Get package dependency information from "NAME".
235      echo "    -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME"  
236      echo "      -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME"      -pdefault NAME | --pdefault NAME
237      echo "    -mods NAME | --mods NAME | -mo NAME | --mo NAME"        -pdefault=NAME | --pdefault=NAME
238      echo "      -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME"            Get the default package list from "NAME".
239      echo "    -disable NAME | --disable NAME"  
240      echo "      -disable=NAME | --disable=NAME"      -make NAME | -m NAME
241      echo "    -enable NAME | --enable NAME"        --make=NAME | -m=NAME
242      echo "      -enable=NAME | --enable=NAME"            Use "NAME" for the MAKE program. The default is "make" but
243      echo "    -standarddirs NAME | --standarddirs NAME"            many platforms, "gmake" is the preferred choice.
244      echo "      -standarddirs=NAME | --standarddirs=NAME"  
245      echo "    -noopt NAME | --noopt NAME"      -makefile NAME | -mf NAME
246      echo "      -noopt=NAME | --noopt=NAME"        --makefile=NAME | -mf=NAME
247  #    echo "    -cpp NAME | --cpp NAME"            Call the makefile "NAME".  The default is "Makefile".
248  #    echo "      -cpp=NAME | --cpp=NAME"  
249      echo "    -fortran NAME | --fortran NAME | -fc NAME | --fc NAME"      -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
250      echo "      -fc=NAME | --fc=NAME"        -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
251      echo "    -[no]ieee | --[no]ieee"            Specify the location of the MITgcm ROOTDIR as "NAME".
252      echo "    -[no]mpi | --[no]mpi"            By default, genamke will try to find the location by
253      echo "    -[no]jam | --[no]jam"            looking in parent directories (up to the 5th parent).
254      echo  
255      echo "  and NAME is a string such as:"      -mods NAME | --mods NAME | -mo NAME | --mo NAME
256      echo        -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME
257      echo "    --enable pkg1   --enable 'pkg1 pkg2'   --enable 'pkg1 pkg2 pkg3'"            Here, "NAME" specifies a list of directories that are
258      echo "    -mods=dir1   -mods='dir1'   -mods='dir1 dir2 dir3'"            used for additional source code.  Files found in the
259      echo "    -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'"            "mods list" are given preference over files of the same
260      echo            name found elsewhere.
261      echo "  which, depending upon your shell, may need to be single-quoted"  
262      echo "  if it contains spaces, dashes, or other special characters."      -disable NAME | --disable NAME
263          -disable=NAME | --disable=NAME
264              Here "NAME" specifies a list of packages that we don't
265              want to use.  If this violates package dependencies,
266              genamke will exit with an error message.
267    
268        -enable NAME | --enable NAME
269          -enable=NAME | --enable=NAME
270              Here "NAME" specifies a list of packages that we wish
271              to specifically enable.  If this violates package
272              dependencies, genamke will exit with an error message.
273    
274        -standarddirs NAME | --standarddirs NAME
275          -standarddirs=NAME | --standarddirs=NAME
276              Here, "NAME" specifies a list of directories to be
277              used as the "standard" code.
278    
279        -fortran NAME | --fortran NAME | -fc NAME | --fc NAME
280          -fc=NAME | --fc=NAME
281              Use "NAME" as the fortran compiler.  By default, genmake
282              will search for a working compiler by trying a list of
283              "usual suspects" such as g77, f77, etc.
284    
285        -[no]ieee | --[no]ieee
286              Do or don't use IEEE numerics.  Note that this option
287              *only* works if it is supported by the OPTFILE that
288              is being used.
289    
290      While it is most often a single word, the "NAME" variables specified
291      above can in many cases be a space-delimited string such as:
292    
293        --enable pkg1   --enable 'pkg1 pkg2'   --enable 'pkg1 pkg2 pkg3'
294        -mods=dir1   -mods='dir1'   -mods='dir1 dir2 dir3'
295        -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'
296    
297      which, depending upon your shell, may need to be single-quoted.
298    
299      For more detailed genmake documentation, please see:
300    
301        http://mitgcm.org/devel_HOWTO/
302    
303    EOF
304    
305      exit 1      exit 1
306  }  }
307    
308  #eh3 # This is the generic configuration.  #  Build a CPP macro to automate calling C routines from FORTRAN
309  #eh3 set LN         = ( 'ln -s' )  get_fortran_c_namemangling()  {
310  #eh3 set CPP        = ( '/lib/cpp -P' )      default_nm="#define FC_NAMEMANGLE(X) X ## _"
311  #eh3 set S64        = ( '$(TOOLSDIR)/set64bitConst.sh' )      
312  #eh3 set KPP        = (  )      cat > genmake_test.c <<EOF
313  #eh3 set FC         = ( 'f77' )  void tcall( char * string ) { tsub( string ); }
314  #eh3 set LINK       = $FC  EOF
315  #eh3 set MAKEDEPEND = ( 'makedepend' )      $MAKE genmake_test.o >> genmake_warnings 2>&1
316  #eh3 set INCLUDES   = ( -I. )      RETVAL=$?
317  #eh3 set FFLAGS     = (  )      if test "x$RETVAL" != x0 ; then
318  #eh3 set FOPTIM     = (  )          FC_NAMEMANGLE=$default_nm
319  #eh3 set CFLAGS     = (  )          cat <<EOF>> genmake_errors
320  #eh3 set KFLAGS1    = (  )  
321  #eh3 set KFLAGS2    = (  )  WARNING: C test compile fails
322  #eh3 set LIBS       = (  )  WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
323  #eh3 set KPPFILES   = (  )  WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
324  #eh3 if (! $?NOOPTFILES ) set NOOPTFILES = (  )  EOF
325  #eh3 if (! $?NOOPTFLAGS ) set NOOPTFLAGS = (  )          return 1
326        fi
327        c_tcall=`nm genmake_test.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`
328        RETVAL=$?
329        if test "x$RETVAL" != x0 ; then
330            FC_NAMEMANGLE=$default_nm
331            cat <<EOF>> genmake_warnings
332    
333    WARNING: The "nm" command failed.
334    WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
335    WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
336    EOF
337            return 1
338        fi
339        cat > genmake_tcomp.f <<EOF
340          subroutine tcall( string )
341          character*(*) string
342          call tsub( string )
343          end
344    EOF
345        $FC $FFLAGS $DEFINES -c genmake_tcomp.f >> genmake_warnings 2>&1
346        RETVAL=$?
347        if test "x$RETVAL" != x0 ; then
348            FC_NAMEMANGLE=$default_nm
349            cat <<EOF>> genmake_warnings
350    
351    WARNING: FORTRAN test compile fails -- please see "genmake_errors"
352    WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
353    WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
354    EOF
355            return 1
356        fi
357        f_tcall=`nm genmake_tcomp.o | grep 'T ' | grep tcall | cut -d ' ' -f 3`
358        RETVAL=$?
359        if test "x$RETVAL" != x0 ; then
360            FC_NAMEMANGLE=$default_nm
361            cat <<EOF>> genmake_warnings
362    
363    WARNING: The "nm" command failed.
364    WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
365    WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
366    EOF
367            return 1
368        fi
369    
370        c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
371        f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
372        c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
373        f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
374    
375        nmangle="X"
376        if test "x$c_a" != "x$f_a" ; then
377            comm="echo x$f_a | sed -e 's|x$c_a||'"
378            a=`eval $comm`
379            nmangle="$a ## $nmangle"
380        fi
381        if test "x$c_b" != "x$f_b" ; then
382            comm="echo x$f_b | sed -e 's|x$c_b||'"
383            b=`eval $comm`
384            nmangle="$nmangle ## $b"
385        fi
386    
387        FC_NAMEMANGLE="#define FC_NAMEMANGLE(X)  $nmangle"
388    
389        #  cleanup the testing files
390        rm -f genmake_tcomp.* genmake_test.*
391    }
392    
393    
394    check_HAVE_CLOC()  {
395        get_fortran_c_namemangling
396        cat <<EOF > genmake_tc_1.c
397    $FC_NAMEMANGLE
398    #include <stdio.h>
399    #include <stdlib.h>
400    #include <unistd.h>
401    #include <assert.h>
402    #include <sys/time.h>
403    void FC_NAMEMANGLE(cloc) ( double *curtim )
404    {
405     struct timeval tv1;
406     gettimeofday(&tv1 , (void *)NULL );
407     *curtim =  (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6);
408     *curtim = *curtim/1.E6;
409    }
410    EOF
411        make genmake_tc_1.o >> genmake_tc.log 2>&1
412        RET_C=$?
413        cat <<EOF > genmake_tc_2.f
414          program hello
415          Real*8 wtime
416          external cloc
417          call cloc(wtime)
418          print *," HELLO WORLD", wtime
419          end program hello
420    EOF
421        $FC $FFLAGS -o genmake_tc genmake_tc_2.f genmake_tc_1.o >> genmake_tc.log 2>&1
422        RET_F=$?
423        test -x ./genmake_tc  &&  ./genmake_tc >> genmake_tc.log 2>&1
424        RETVAL=$?
425        if test "x$RETVAL" = x0 ; then
426            HAVE_CLOC=t
427            DEFINES="$DEFINES -DHAVE_CLOC"
428        fi
429        rm -f genmake_tc*
430    }
431    
432    
433  #  Set defaults here  #  Set defaults here
434  COMMANDL="$0 $@"  COMMANDL="$0 $@"
# Line 291  S64= Line 439  S64=
439  KPP=  KPP=
440  FC=  FC=
441  LINK=  LINK=
442  DEFINES="-DWORDLENGTH=4"  # DEFINES="-DWORDLENGTH=4"
443    DEFINES=
444  PACKAGES=  PACKAGES=
445  ENABLE=  ENABLE=
446  DISABLE=  DISABLE=
# Line 312  KPPFILES= Line 461  KPPFILES=
461  NOOPTFILES=  NOOPTFILES=
462  NOOPTFLAGS=  NOOPTFLAGS=
463    
464    # DEFINES checked by test compilation
465    HAVE_SYSTEM=
466    HAVE_FDATE=
467    FC_NAMEMANGLE=
468    HAVE_CLOC=
469    
470  MODS=  MODS=
471  TOOLSDIR=  TOOLSDIR=
472  SOURCEDIRS=  SOURCEDIRS=
# Line 349  TAMC_EXTRA= Line 504  TAMC_EXTRA=
504    
505    
506  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
507  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE NOOPT"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
508  gm_s2="FC IEEE MPI JAM DUMPSTATE STANDARDDIRS"  gm_s2="FC IEEE MPI JAM DUMPSTATE STANDARDDIRS"
509    
510  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
# Line 357  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPE Line 512  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPE
512  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
513  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOSTNAME THISDATE MACHINE"  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOSTNAME THISDATE MACHINE"
514  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
515    gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE"
516    
517  #  The following are all related to adjoint/tangent-linear stuff  #  The following are all related to adjoint/tangent-linear stuff
518  gm_s7="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"  gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
519  gm_s8="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"  gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"
520  gm_s9="TAF_EXTRA TAMC_EXTRA"  gm_s12="TAF_EXTRA TAMC_EXTRA"
521    
522  gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7 $gm_s8 $gm_s9"  gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7"
523    gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"
524    
525    cat <<EOF
526    
527    GENMAKE :
528    
529    A program for GENerating MAKEfiles for the MITgcm project.  For a
530    quick list of options, use "genmake -h" or for more detail see:
531    
532      http://mitgcm.org/devel_HOWTO/
533    
534    EOF
535    
 echo  
536  echo "===  Processing options files and arguments  ==="  echo "===  Processing options files and arguments  ==="
537  gm_local="genmake_local"  gm_local="genmake_local"
538  for i in . $MODS ; do  for i in . $MODS ; do
539      if test -r $i/$gm_local ; then      if test -r $i/$gm_local ; then
540          source $i/$gm_local          . $i/$gm_local
541          break          break
542      fi      fi
543  done  done
544  echo -n "  getting local config information:  "  echo -n "  getting local config information:  "
545  if test -e $gm_local ; then  if test -e $gm_local ; then
546      echo "using $gm_local"      echo "using $gm_local"
547      source $gm_local      . $gm_local
548      # echo "DISABLE=$DISABLE"      # echo "DISABLE=$DISABLE"
549      # echo "ENABLE=$ENABLE"      # echo "ENABLE=$ENABLE"
550  else  else
# Line 445  for ac_option ; do Line 611  for ac_option ; do
611          -makefile=* | --makefile=* | -ma=* | --ma=*)          -makefile=* | --makefile=* | -ma=* | --ma=*)
612              MAKEFILE=$ac_optarg ;;              MAKEFILE=$ac_optarg ;;
613                    
614          -platform | --platform | -pl | --pl)          -platform | --platform | -pl | --pl | -platform=* | --platform=* | -pl=* | --pl=*)
615              ac_prev=PLATFORM ;;              echo "ERROR: The platform option has been removed.  Please specify"
616          -platform=* | --platform=* | -pl=* | --pl=*)              echo "  the build options using the \"optfile\" mechanism."
617              PLATFORM=$ac_optarg ;;              echo
618                usage
619                ;;
620                    
621          -rootdir | --rootdir | -rd | --rd)          -rootdir | --rootdir | -rd | --rd)
622              ac_prev=ROOTDIR ;;              ac_prev=ROOTDIR ;;
# Line 475  for ac_option ; do Line 643  for ac_option ; do
643          -standarddirs=* | --standarddirs=*)          -standarddirs=* | --standarddirs=*)
644              STANDARDDIRS=$ac_optarg ;;              STANDARDDIRS=$ac_optarg ;;
645    
         -noopt | --noopt)  
             ac_prev=NOOPT ;;  
         -noopt=* | --noopt=*)  
             NOOPT=$ac_optarg ;;  
           
646  #           -cpp | --cpp)  #           -cpp | --cpp)
647  #               ac_prev=cpp ;;  #               ac_prev=cpp ;;
648  #           -cpp=* | --cpp=*)  #           -cpp=* | --cpp=*)
# Line 495  for ac_option ; do Line 658  for ac_option ; do
658          -noieee | --noieee)          -noieee | --noieee)
659              IEEE= ;;              IEEE= ;;
660                    
661          -mpi | --mpi)  #       -jam | --jam)
662              MPI=true ;;  #           JAM=1 ;;
663          -nompi | --nompi)  #       -nojam | --nojam)
664              MPI= ;;  #           JAM=0 ;;
           
         -jam | --jam)  
             JAM=1 ;;  
         -nojam | --nojam)  
             JAM=0 ;;  
665                    
666          -ds | --ds)          -ds | --ds)
667              DUMPSTATE=t ;;              DUMPSTATE=t ;;
# Line 582  fi Line 740  fi
740  if test "x$OPTFILE" != xNONE ; then  if test "x$OPTFILE" != xNONE ; then
741      if test -f "$OPTFILE" -a -r "$OPTFILE" ; then      if test -f "$OPTFILE" -a -r "$OPTFILE" ; then
742          echo "    using OPTFILE=\"$OPTFILE\""          echo "    using OPTFILE=\"$OPTFILE\""
743          source "$OPTFILE"          . "$OPTFILE"
744          RETVAL=$?          RETVAL=$?
745          if test "x$RETVAL" != x0 ; then          if test "x$RETVAL" != x0 ; then
746              echo -n "Error: failed to source OPTFILE \"$OPTFILE\""              echo -n "Error: failed to source OPTFILE \"$OPTFILE\""
# Line 609  fi Line 767  fi
767  if test "x${AD_OPTFILE}" != xNONE ; then  if test "x${AD_OPTFILE}" != xNONE ; then
768      if test -f "$AD_OPTFILE" -a -r "$AD_OPTFILE" ; then      if test -f "$AD_OPTFILE" -a -r "$AD_OPTFILE" ; then
769          echo "    using AD_OPTFILE=\"$AD_OPTFILE\""          echo "    using AD_OPTFILE=\"$AD_OPTFILE\""
770          source "$AD_OPTFILE"          . "$AD_OPTFILE"
771          RETVAL=$?          RETVAL=$?
772          if test "x$RETVAL" != x0 ; then          if test "x$RETVAL" != x0 ; then
773              echo -n "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""              echo -n "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
# Line 625  if test "x${AD_OPTFILE}" != xNONE ; then Line 783  if test "x${AD_OPTFILE}" != xNONE ; then
783      fi      fi
784  fi  fi
785    
786  #  Check that FC, LINK, CPP, and S64 are defined.  If not, complain  #  Check that FC, LINK, CPP, S64, LN, and MAKE are defined.  If not,
787  #  and abort!  #  either set defaults or complain and abort!
788  if test "x$FC" = x ; then  if test "x$FC" = x ; then
789      cat <<EOF 1>&2      cat <<EOF 1>&2
790    
# Line 643  fi Line 801  fi
801  if test "x$CPP" = x ; then  if test "x$CPP" = x ; then
802      CPP="cpp"      CPP="cpp"
803  fi  fi
804    if test "x$MAKE" = x ; then
805        MAKE="make"
806    fi
807  echo "#define A a" | $CPP > test_cpp 2>&1  echo "#define A a" | $CPP > test_cpp 2>&1
808  RETVAL=$?  RETVAL=$?
809  if test "x$RETVAL" != x0 ; then  if test "x$RETVAL" != x0 ; then
# Line 652  Error: C pre-processor "$CPP" failed the Line 813  Error: C pre-processor "$CPP" failed the
813    
814    1) within the options file ("CPP=...") as specified by "-of=OPTFILE"    1) within the options file ("CPP=...") as specified by "-of=OPTFILE"
815    2) the "./genmake_local" file    2) the "./genmake_local" file
816      3) with the CPP environment variable
817    
818  EOF  EOF
819      exit 1      exit 1
# Line 661  fi Line 823  fi
823  if test "x$MAKEDEPEND" = x ; then  if test "x$MAKEDEPEND" = x ; then
824      MAKEDEPEND=makedepend      MAKEDEPEND=makedepend
825  fi  fi
826    if test "x$LN" = x ; then
827        LN="ln -s"
828    fi
829    echo "test" > genmake_test_ln
830    $LN genmake_test_ln genmake_tlink
831    RETVAL=$?
832    if test "x$RETVAL" != x0 ; then
833        cat <<EOF 1>&2
834    
835    Error: The command "ln -s" failed -- please specify a working soft-link
836      command in the optfile.
837    
838    EOF
839        exit 1
840    fi
841    rm -f genmake_test_ln genmake_tlink
842    
843    
844    printf "\n===  Checking system libraries  ===\n"
845    echo -n "  Do we have the system() command using $FC...  "
846    cat > genmake_tcomp.f <<EOF
847          program hello
848          call system('echo hi')
849          end
850    EOF
851    $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1
852    RETVAL=$?
853    if test "x$RETVAL" = x0 ; then
854        HAVE_SYSTEM=t
855        DEFINES="$DEFINES -DHAVE_SYSTEM"
856        echo "yes"
857    else
858        HAVE_SYSTEM=
859        echo "no"
860    fi
861    rm -f genmake_tcomp*
862    
863    echo -n "  Do we have the fdate() command using $FC...  "
864    cat > genmake_tcomp.f <<EOF
865          program hello
866          CHARACTER(128) string
867          string = ' '
868          call fdate( string )
869          print *, string
870          end
871    EOF
872    $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1
873    RETVAL=$?
874    if test "x$RETVAL" = x0 ; then
875        HAVE_FDATE=t
876        DEFINES="$DEFINES -DHAVE_FDATE"
877        echo "yes"
878    else
879        HAVE_FDATE=
880        echo "no"
881    fi
882    rm -f genmake_tcomp*
883    
884    echo -n "  Can we call simple C routines (here, \"cloc()\") using $FC...  "
885    check_HAVE_CLOC
886    if test "x$HAVE_CLOC" != x ; then
887        echo "yes"
888    else
889        echo "no"
890    fi
891    echo "$FC_NAMEMANGLE" > FC_NAMEMANGLE.h.template
892    cmp FC_NAMEMANGLE.h FC_NAMEMANGLE.h.template > /dev/null 2>&1
893    RETVAL=$?
894    if test "x$RETVAL" != x0 ; then
895        mv -f FC_NAMEMANGLE.h.template FC_NAMEMANGLE.h
896    fi
897    rm -f genmake_t*
898    
899    
900  printf "\n===  Setting defaults  ===\n"  printf "\n===  Setting defaults  ===\n"
901  echo -n "  Adding MODS directories:  "  echo -n "  Adding MODS directories:  "
# Line 714  EXECUTABLE=${EXECUTABLE:-mitgcmuv} Line 949  EXECUTABLE=${EXECUTABLE:-mitgcmuv}
949  #  they appear as regular source code  #  they appear as regular source code
950  if test -r $ROOTDIR"/eesupp/src/Makefile" ; then  if test -r $ROOTDIR"/eesupp/src/Makefile" ; then
951      echo "  Making source files in eesupp from templates"      echo "  Making source files in eesupp from templates"
952      $MAKE -C $ROOTDIR"/eesupp/src/" > make_eesupp.errors 2>&1      ( cd $ROOTDIR"/eesupp/src/" && $MAKE ) > make_eesupp.errors 2>&1
953      RETVAL=$?      RETVAL=$?
954      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
955          rm -f make_eesupp.errors          rm -f make_eesupp.errors
# Line 751  if test ! "x${RETVAL}" = x0 ; then Line 986  if test ! "x${RETVAL}" = x0 ; then
986      echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\""      echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\""
987      exit 1      exit 1
988  fi  fi
989  source ./.pd_tmp  . ./.pd_tmp
990  rm -f ./.pd_tmp  rm -f ./.pd_tmp
991    
992  #  Search for default packages.  Note that a "$ROOTDIR/pkg/pkg_groups"  #  Search for default packages.  Note that a "$ROOTDIR/pkg/pkg_groups"
993  #  file should eventually be added so that, for convenience, one can  #  file should eventually be added so that, for convenience, one can
994  #  specify groups of packages using names like "ocean" and "atmosphere".  #  specify groups of packages using names like "ocean" and "atmosphere".
995  echo  -n "  checking default package list:  "  echo "  checking default package list:  "
996  if test "x${PDEFAULT}" = x ; then  if test "x${PDEFAULT}" = x ; then
997      for i in "." $MODS ; do      for i in "." $MODS ; do
998          if test -r $i"/packages.conf" ; then          if test -r $i"/packages.conf" ; then
# Line 770  if test "x${PDEFAULT}" = x ; then Line 1005  if test "x${PDEFAULT}" = x ; then
1005      PDEFAULT="$ROOTDIR/pkg/pkg_default"      PDEFAULT="$ROOTDIR/pkg/pkg_default"
1006  fi  fi
1007  if test "x${PDEFAULT}" = xNONE ; then  if test "x${PDEFAULT}" = xNONE ; then
1008      echo "default packages file disabled"      echo "    default packages file disabled"
1009  else  else
1010      if test ! -r $PDEFAULT ; then      if test ! -r $PDEFAULT ; then
         echo ""  
1011          echo "Warning:  can't read default packages from PDEFAULT=\"$PDEFAULT\""          echo "Warning:  can't read default packages from PDEFAULT=\"$PDEFAULT\""
1012      else      else
1013          echo "  using PDEFAULT=\"$PDEFAULT\""          echo "    using PDEFAULT=\"$PDEFAULT\""
1014          #  Strip the comments and add all the names          #  Strip the comments and add all the names
1015          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1016          RETVAL=$?          RETVAL=$?
# Line 909  for i in $PACKAGES ; do Line 1143  for i in $PACKAGES ; do
1143      fi      fi
1144  done  done
1145    
 #  This is compatible with the old genmake.  The "DISABLE_*" flags  
 #  need to be replaced by the "ALLOW_*" flags set below.  
 #  
 # echo -n "  Setting package-specific CPP flags:  "  
 # pkrm=( mom_fluxform mom_vecinv generic_advdiff )  
 # pkrmdef=( -DDISABLE_MOM_FLUXFORM -DDISABLE_MOM_VECINV -DDISABLE_GENERIC_ADVDIFF -DDISABLE_DEBUGMODE )  
 # echo -n "  "  
 # i=0  
 # while test $i -lt "${#pkrm[@]}" ; do  
 #     echo "$PACKAGES" | grep "${pk[$i]}" > /dev/null 2>&1  
 #     RETVAL=$?  
 #     if test "x$RETVAL" = x1 ; then  
 #       DEFINES="$DEFINES ${pkdef[$i]}"  
 #       echo -n " ${pkdef[$i]}"  
 #     fi  
 #     i=$(( $i + 1 ))  
 # done  
 # echo  
1146    
1147  # Create a list of #define and #undef to enable/disable packages  # Create a list of #define and #undef to enable/disable packages
1148  PACKAGES_DOT_H=PACKAGES_CONFIG.h  PACKAGES_DOT_H=PACKAGES_CONFIG.h
# Line 960  for n in $names ; do Line 1176  for n in $names ; do
1176          if test "x$has_pack" = xf ; then          if test "x$has_pack" = xf ; then
1177              undef=`echo "ALLOW_$n" | $AWK '{print toupper($0)}'`              undef=`echo "ALLOW_$n" | $AWK '{print toupper($0)}'`
1178              echo "#undef $undef" >> $PACKAGES_DOT_H".tmp"              echo "#undef $undef" >> $PACKAGES_DOT_H".tmp"
 #           DEFINES="$DEFINES -U$undef"  
   
 #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  
             case $n in  
                 mom_fluxform)  
                     DEFINES="$DEFINES -DDISABLE_MOM_FLUXFORM"  
                     ;;  
                 mom_vecinv)  
                     DEFINES="$DEFINES -DDISABLE_MOM_VECINV"  
                     ;;  
                 debug)  
                     DEFINES="$DEFINES -DDISABLE_DEBUGMODE"  
                     ;;  
             esac  
 #EH3  WARNING :  This is an UGLY HACK that needs to be removed!!!  
   
1179          fi          fi
1180      fi      fi
1181  done  done
# Line 1041  for d in $STANDARDDIRS ; do Line 1241  for d in $STANDARDDIRS ; do
1241      fi      fi
1242  done  done
1243    
1244  echo " Searching for CPP_OPTIONS.h in order to warn about the presence"  echo "  Searching for CPP_OPTIONS.h in order to warn about the presence"
1245  echo " of \"#define ALLOW_PKGNAME\"-type statements:"  echo "    of \"#define ALLOW_PKGNAME\"-type statements:"
1246  CPP_OPTIONS=  CPP_OPTIONS=
1247  spaths=". $INCLUDEDIRS"  spaths=". $INCLUDEDIRS"
1248  for i in $spaths ; do  for i in $spaths ; do
# Line 1292  output.txt: \$(EXECUTABLE) Line 1492  output.txt: \$(EXECUTABLE)
1492          @\$(EXECUTABLE) > \$@          @\$(EXECUTABLE) > \$@
1493    
1494  clean:  clean:
1495            -cat AD_CONFIG.template > AD_CONFIG.h
1496          -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl}          -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl}
1497  Clean:  Clean:
1498          @make clean          @make clean
1499          @make cleanlinks          @make cleanlinks
1500          -rm -f Makefile.bak genmake_state genmake_optfile make.log          -rm -f Makefile.bak genmake_state genmake_*optfile genmake_warnings make.log
1501  CLEAN:  CLEAN:
1502          @make Clean          @make Clean
1503          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
# Line 1363  rm -f ad_files Line 1564  rm -f ad_files
1564    
1565  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
1566    
1567  ad_input_code.f: \$(F77FILES)  # ... AD ...
1568    adall: ad_taf
1569    adtaf: ad_taf_output.f
1570    adtamc: ad_tamc_output.f
1571    
1572    ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)
1573            cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
1574            @make \$(F77FILES)
1575          @make \$(AD_FLOW_FILES)          @make \$(AD_FLOW_FILES)
1576          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f
1577    
 # ... AD ...  
 ad: ad_taf  
 ad_taf_f: ad_taf_output.f  
 ad_tamc_f: ad_tamc_output.f  
   
1578  ad_taf_output.f: ad_input_code.f  ad_taf_output.f: ad_input_code.f
1579          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f
1580          cat ad_input_code_ad.f | sed -f adjoint_sed > ad_taf_output.f          cat ad_input_code_ad.f | sed -f adjoint_sed > ad_taf_output.f
1581    
1582    adtafonly:
1583            \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f
1584            cat ad_input_code_ad.f | sed -f adjoint_sed > ad_taf_output.f
1585    
1586  ad_taf: ad_taf_output.o \$(OBJFILES)  ad_taf: ad_taf_output.o \$(OBJFILES)
1587          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
1588    
# Line 1388  ad_tamc: ad_tamc_output.o \$(OBJFILES) Line 1595  ad_tamc: ad_tamc_output.o \$(OBJFILES)
1595    
1596    
1597  # ... FTL ...  # ... FTL ...
1598  ftl: ftl_taf  ftlall: ftl_taf
1599  ftl_taf_f: ftl_taf_output.f  ftltaf: ftl_taf_output.f
1600  ftl_tamc_f: ftl_tamc_output.f  ftltamc: ftl_tamc_output.f
1601    
1602  ftl_taf_output.f: ad_input_code.f  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)
1603          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
1604          cat ad_input_code_ftl.f | sed -f adjoint_sed > ftl_taf_output.f          @make \$(F77FILES)
1605            @make \$(AD_FLOW_FILES)
1606            cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.f
1607    
1608    ftl_taf_output.f: ftl_input_code.f
1609            \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f
1610            cat ftl_input_code_ftl.f | sed -f adjoint_sed > ftl_taf_output.f
1611    
1612    ftltafonly:
1613            \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f
1614            cat ftl_input_code_ftl.f | sed -f adjoint_sed > ftl_taf_output.f
1615    
1616  ftl_taf: ftl_taf_output.o \$(OBJFILES)  ftl_taf: ftl_taf_output.o \$(OBJFILES)
1617          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
1618    
1619  ftl_tamc_output.f: ad_input_code.f  ftl_tamc_output.f: ftl_input_code.f
1620          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.f          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.f
1621          cat ad_input_code_ftl.f | sed -f adjoint_sed > ftl_tamc_output.f          cat ftl_input_code_ftl.f | sed -f adjoint_sed > ftl_tamc_output.f
1622    
1623  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
1624          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
1625    
1626    
1627  # ... SVD ...  # ... SVD ...
1628  svd: svd_taf  svdtaf: ad_taf_output.f ftl_taf_output.f
1629  svd_taf_f: svd_taf_output.f  svdall: svd_taf
   
 svd_taf_output.f: ad_input_code.f  
         \$(TAF) \$(SVD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f  
         cat ad_input_code_ad.f | sed -f adjoint_sed > svd_taf_output.f  
1630    
1631  svd_taf: svd_taf_output.o \$(OBJFILES)  svd_taf: ad_taf_output.o ftl_taf_output.o \$(OBJFILES)
1632          \$(LINK) -o ${EXE_SVD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) svd_taf_output.o \$(LIBS)          \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
1633    
1634    
1635  #=========================================  #=========================================
# Line 1457  printf "\n\n# DO NOT DELETE\n" >> $MAKEF Line 1670  printf "\n\n# DO NOT DELETE\n" >> $MAKEF
1670    
1671  printf "\n===  Done  ===\n"  printf "\n===  Done  ===\n"
1672    
1673    #  Write the "template" files for the adjoint builds
1674    cat >AD_CONFIG.template <<EOF
1675    C  WARNING: This file is automatically generated by genmake2 and
1676    C    used by the Makefile rules.  Please DO NOT EDIT this file
1677    C    unless you are CERTAIN that you know what you are doing.
1678    
1679    #undef ALLOW_ADJOINT_RUN
1680    #undef ALLOW_TANGENTLINEAR_RUN
1681    #undef ALLOW_ECCO_OPTIMIZATION
1682    EOF
1683    cat >ad_config.template <<EOF
1684    C  WARNING: This file is automatically generated by genmake2 and
1685    C    used by the Makefile rules.  Please DO NOT EDIT this file
1686    C    unless you are CERTAIN that you know what you are doing.
1687    
1688    #define ALLOW_ADJOINT_RUN
1689    #undef ALLOW_TANGENTLINEAR_RUN
1690    #undef ALLOW_ECCO_OPTIMIZATION
1691    EOF
1692    cat >ftl_config.template <<EOF
1693    C  WARNING: This file is automatically generated by genmake2 and
1694    C    used by the Makefile rules.  Please DO NOT EDIT this file
1695    C    unless you are CERTAIN that you know what you are doing.
1696    
1697    #undef ALLOW_ADJOINT_RUN
1698    #define ALLOW_TANGENTLINEAR_RUN
1699    #undef ALLOW_ECCO_OPTIMIZATION
1700    EOF
1701    cat >svd_config.template <<EOF
1702    C  WARNING: This file is automatically generated by genmake2 and
1703    C    used by the Makefile rules.  Please DO NOT EDIT this file
1704    C    unless you are CERTAIN that you know what you are doing.
1705    
1706    #undef ALLOW_ADJOINT_RUN
1707    #undef ALLOW_TANGENTLINEAR_RUN
1708    #undef ALLOW_ECCO_OPTIMIZATION
1709    EOF
1710    cp AD_CONFIG.template AD_CONFIG.h
1711    
1712    
1713  #  Write the "state" for future records  #  Write the "state" for future records
1714  if test "x$DUMPSTATE" != xf ; then  if test "x$DUMPSTATE" != xf ; then
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