611 |
set to PATH. i.e. Include files from \$PATH/include, link to libraries |
set to PATH. i.e. Include files from \$PATH/include, link to libraries |
612 |
from \$PATH/lib and use binaries from \$PATH/bin. |
from \$PATH/lib and use binaries from \$PATH/bin. |
613 |
|
|
614 |
|
-omp | --omp |
615 |
|
Activate OpenMP code + use Compiler option OMPFLAG |
616 |
|
-omp=OMPFLAG | --omp=OMPFLAG |
617 |
|
Activate OpenMP code + use Compiler option OMPFLAG |
618 |
|
|
619 |
-es | --es | -embed-source | --embed-source |
-es | --es | -embed-source | --embed-source |
620 |
Embed a tarball containing the full source code |
Embed a tarball containing the full source code |
621 |
(including the Makefile, etc.) used to build the |
(including the Makefile, etc.) used to build the |
1063 |
NOOPTFLAGS= |
NOOPTFLAGS= |
1064 |
MPI= |
MPI= |
1065 |
MPIPATH= |
MPIPATH= |
1066 |
|
OMP= |
1067 |
|
OMPFLAG= |
1068 |
TS= |
TS= |
1069 |
PAPIS= |
PAPIS= |
1070 |
PCLS= |
PCLS= |
1132 |
|
|
1133 |
# The following state can be set directly by command-line switches |
# The following state can be set directly by command-line switches |
1134 |
gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE" |
gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE" |
1135 |
gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL DEVEL MPI JAM DUMPSTATE STANDARDDIRS" |
gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL DEVEL MPI OMP DUMPSTATE STANDARDDIRS" |
1136 |
|
|
1137 |
# The following state is not directly set by command-line switches |
# The following state is not directly set by command-line switches |
1138 |
gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM FEXTRAFLAGS" |
gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM FEXTRAFLAGS" |
1173 |
fi |
fi |
1174 |
|
|
1175 |
#echo "$0::$1:$2:$3:$4:$5:$6:$7:" |
#echo "$0::$1:$2:$3:$4:$5:$6:$7:" |
|
#OPTIONS= |
|
|
#n=0 |
|
|
#for i ; do |
|
|
# echo "$i $n" |
|
|
# setvar="OPTIONS[$n]='$i'" |
|
|
# # echo " $setvar" |
|
|
# eval "$setvar" |
|
|
# n=$(( $n + 1 )) |
|
|
#done |
|
1176 |
#parse_options |
#parse_options |
1177 |
ac_prev= |
ac_prev= |
1178 |
for ac_option in "$@" ; do |
for ac_option in "$@" ; do |
1324 |
MPIPATH=$ac_optarg |
MPIPATH=$ac_optarg |
1325 |
MPI=true ;; |
MPI=true ;; |
1326 |
|
|
1327 |
# -jam | --jam) |
-omp | --omp) |
1328 |
# JAM=1 ;; |
OMP=true ;; |
1329 |
# -nojam | --nojam) |
-omp=* | --omp=*) |
1330 |
# JAM=0 ;; |
OMPFLAG=$ac_optarg |
1331 |
|
OMP=true ;; |
1332 |
|
|
1333 |
-ds | --ds) |
-ds | --ds) |
1334 |
DUMPSTATE=t ;; |
DUMPSTATE=t ;; |
1566 |
echo " Turning on MPI cpp macros" |
echo " Turning on MPI cpp macros" |
1567 |
DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI" |
DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI" |
1568 |
fi |
fi |
1569 |
|
if test ! "x$OMP" = x ; then |
1570 |
|
echo " Add OMPFLAG and turn on OpenMP cpp macros" |
1571 |
|
FFLAGS="$FFLAGS $OMPFLAG" |
1572 |
|
F90FLAGS="$F90FLAGS $OMPFLAG" |
1573 |
|
DEFINES="$DEFINES -DUSE_OMP_THREADING" |
1574 |
|
fi |
1575 |
|
|
1576 |
if test ! "x$TS" = x ; then |
if test ! "x$TS" = x ; then |
1577 |
echo " Turning on timing per timestep" |
echo " Turning on timing per timestep" |
1780 |
|
|
1781 |
|
|
1782 |
printf "\n=== Setting defaults ===\n" |
printf "\n=== Setting defaults ===\n" |
1783 |
printf " Adding MODS directories: " |
printf " Adding MODS directories: " |
1784 |
for d in $MODS ; do |
for d in $MODS ; do |
1785 |
if test ! -d $d ; then |
if test ! -d $d ; then |
1786 |
echo |
echo |
1787 |
echo "Error: MODS directory \"$d\" not found!" |
echo "Error: MODS directory \"$d\" not found!" |
1788 |
exit 1 |
exit 1 |
1789 |
else |
else |
1790 |
printf " $d" |
printf "$d " |
1791 |
SOURCEDIRS="$SOURCEDIRS $d" |
SOURCEDIRS="$SOURCEDIRS $d" |
1792 |
INCLUDEDIRS="$INCLUDEDIRS $d" |
INCLUDEDIRS="$INCLUDEDIRS $d" |
1793 |
fi |
fi |
2467 |
echo "" >> hsrclist.tmp |
echo "" >> hsrclist.tmp |
2468 |
echo "" >> ad_flow_files.tmp |
echo "" >> ad_flow_files.tmp |
2469 |
|
|
2470 |
|
CMDLINE=$0 |
2471 |
|
for xx in "$@" ; do nw=`echo $xx | wc -w` |
2472 |
|
if test $nw = '1' ; then CMDLINE="$CMDLINE $xx" |
2473 |
|
else CMDLINE="$CMDLINE '$xx'" ; fi |
2474 |
|
done |
2475 |
|
|
2476 |
if test -f $MAKEFILE ; then |
if test -f $MAKEFILE ; then |
2477 |
mv -f $MAKEFILE "$MAKEFILE.bak" |
mv -f $MAKEFILE "$MAKEFILE.bak" |
2478 |
fi |
fi |
2482 |
echo "# This makefile was generated automatically on" >> $MAKEFILE |
echo "# This makefile was generated automatically on" >> $MAKEFILE |
2483 |
echo "# $THISDATE" >> $MAKEFILE |
echo "# $THISDATE" >> $MAKEFILE |
2484 |
echo "# by the command:" >> $MAKEFILE |
echo "# by the command:" >> $MAKEFILE |
2485 |
echo "# $0 $G2ARGS" >> $MAKEFILE |
echo "# $CMDLINE" >> $MAKEFILE |
2486 |
echo "# executed by:" >> $MAKEFILE |
echo "# executed by:" >> $MAKEFILE |
2487 |
echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE |
echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE |
2488 |
|
|
2539 |
echo "EMBEDDED_FILES = " >>$MAKEFILE |
echo "EMBEDDED_FILES = " >>$MAKEFILE |
2540 |
fi |
fi |
2541 |
|
|
|
# Note: figure out some way to add Hyades JAM libraries here |
|
2542 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
2543 |
# Unix ln (link) |
# Unix ln (link) |
2544 |
LN = ${LN} |
LN = ${LN} |
2638 |
-rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template |
-rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template |
2639 |
-rm -rf *.o |
-rm -rf *.o |
2640 |
-rm -rf *.$FS *.flowdir |
-rm -rf *.$FS *.flowdir |
2641 |
-rm -rf *.f$FS90 *_mod.h *_mod.F90 *.FF90 *.mod-whirl ad_input* |
-rm -rf *.f$FS90 \$(AD_CLEAN) ad_input* |
|
-rm -rf temp.sed |
|
2642 |
Clean: |
Clean: |
2643 |
@make clean |
@make clean |
2644 |
@make cleanlinks |
@make cleanlinks |
2736 |
#=== Automatic Differentiation Rules === |
#=== Automatic Differentiation Rules === |
2737 |
#=== for TAMC/TAF ====================== |
#=== for TAMC/TAF ====================== |
2738 |
|
|
2739 |
if test "x$OPENAD" == x ; then |
if test "x$OPENAD" = x ; then |
2740 |
|
|
2741 |
cat >>$MAKEFILE <<EOF |
cat >>$MAKEFILE <<EOF |
2742 |
|
|
2777 |
adtaf: ad_taf_output.$FS |
adtaf: ad_taf_output.$FS |
2778 |
adtamc: ad_tamc_output.$FS |
adtamc: ad_tamc_output.$FS |
2779 |
|
|
2780 |
ad_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES) |
ad_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES) \$(AD_FLOW_FILES) |
2781 |
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template |
@$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template |
2782 |
cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h |
cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h |
2783 |
-rm -f ad_config.template |
-rm -f ad_config.template |
2967 |
f95 -fixed -w=unused -maxcontin=132 -c f95_test_mods.f90 > \$@ 2>&1 |
f95 -fixed -w=unused -maxcontin=132 -c f95_test_mods.f90 > \$@ 2>&1 |
2968 |
f95 -fixed -w=unused -maxcontin=132 -c -fixed f95_test.f90 >> \$@ 2>&1 |
f95 -fixed -w=unused -maxcontin=132 -c -fixed f95_test.f90 >> \$@ 2>&1 |
2969 |
|
|
2970 |
AD_OBJ_FILES=\$(OPENAD_SUPPORT_F90_SRC_FILES:.F90=.o) \$(OPENAD_SUPPORT_C_SRC_FILES:.c=.o) all_mods.xb.x2w.w2f.pp.o ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.o \$(NON_AD_F77_SRC_FILES:.F=_cb2m.o) \$(C_SRC_FILES:.c=.o) \$(F90_SRC_FILES:.F90=.o) |
# the file included below is created by the |
2971 |
|
# postProcessor and its inclusion sets the |
2972 |
|
# variable POSTPROCESSEDFILES |
2973 |
|
# used below. Because the file is made during |
2974 |
|
# make it won't be read until the second (recursive) |
2975 |
|
# invocation in the rule below |
2976 |
|
-include postProcess.make |
2977 |
|
|
2978 |
|
AD_OBJ_FILES_S1=\$(OPENAD_SUPPORT_F90_SRC_FILES:.F90=.o) \$(OPENAD_SUPPORT_C_SRC_FILES:.c=.o) \$(POSTPROCESSEDFILES:.f$FS90=.o) |
2979 |
|
|
2980 |
|
AD_OBJ_FILES_S2=\$(AD_OBJ_FILES_S1) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.o) \$(C_SRC_FILES:.c=.o) \$(F90_SRC_FILES:.F90=.o) |
2981 |
|
|
2982 |
|
postProcess.comp: \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) postProcess.tag \$(AD_OBJ_FILES_S1) |
2983 |
|
ifeq (\$(MAKELEVEL),0) |
2984 |
|
\$(MAKE) adAll |
2985 |
|
else |
2986 |
|
touch \$@ |
2987 |
|
endif |
2988 |
|
|
2989 |
\$(EXE_AD): \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) \$(AD_OBJ_FILES) |
\$(EXE_AD): \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) postProcess.comp \$(AD_OBJ_FILES_S2) |
2990 |
@echo Creating \$@ ... |
ifeq (\$(MAKELEVEL),1) |
2991 |
\$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(AD_OBJ_FILES) \$(LIBS) |
\$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(AD_OBJ_FILES_S2) \$(LIBS) |
2992 |
|
else |
2993 |
|
touch \$@ |
2994 |
|
endif |
2995 |
|
|
2996 |
# makefile debug rule |
# makefile debug rule |
2997 |
openad: ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90 |
openad: ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90 |
3021 |
@./\$(EXE_AD) > \$@ |
@./\$(EXE_AD) > \$@ |
3022 |
|
|
3023 |
CB2M_AD_FILES=\$(AD_FILES:.f=_cb2m.f$FS90) |
CB2M_AD_FILES=\$(AD_FILES:.f=_cb2m.f$FS90) |
3024 |
ad_input_code.f$FS90: ../OAD_support/maxMinDefs.f \$(CB2M_AD_FILES) |
ad_input_code.f$FS90: \$(CB2M_AD_FILES) |
3025 |
cat \$^ > \$@ |
cat \$^ > \$@ |
3026 |
|
|
3027 |
# strip all comments and blanks to reduce |
# strip all comments and blanks to reduce |
3041 |
|
|
3042 |
# canonicalizer |
# canonicalizer |
3043 |
ad_input_code_sf.w2f.pre.f$FS90: ad_input_code_sf.w2f.f$FS90 preProcess.py |
ad_input_code_sf.w2f.pre.f$FS90: ad_input_code_sf.w2f.f$FS90 preProcess.py |
3044 |
./preProcess.py --mode=reverse \$< -o \$@ |
./preProcess.py --timing -H -S \$< -o \$@ |
3045 |
|
|
3046 |
# F -> WHIRL |
# F -> WHIRL |
3047 |
# note that the canonicalized version cuts off at col 72 |
# note that the canonicalized version cuts off at col 72 |
3058 |
./whirl2xaif -s -n --debug 1 -o \$@ \$< |
./whirl2xaif -s -n --debug 1 -o \$@ \$< |
3059 |
|
|
3060 |
# XAIF -> XAIF' |
# XAIF -> XAIF' |
3061 |
ad_input_code_sf.w2f.pre.xb.xaif : ad_input_code_sf.w2f.pre.xaif xaif.xsd xaif_base.xsd xaif_inlinable_intrinsics.xsd xaif_derivative_propagator.xsd xaif_output.xsd openad_adm |
ad_input_code_sf.w2f.pre.xb.xaif : ad_input_code_sf.w2f.pre.xaif xaif.xsd xaif_base.xsd xaif_inlinable_intrinsics.xsd xaif_derivative_propagator.xsd xaif_output.xsd oadDriver |
3062 |
./openad_adm -f -t forward_step -i \$< -c \${XAIFSCHEMAROOT}/schema/examples/inlinable_intrinsics.xaif -o \$@ -I -r |
./oadDriver -f -t forward_step -i \$< -c \${XAIFSCHEMAROOT}/schema/examples/inlinable_intrinsics.xaif -o \$@ -I -r |
3063 |
|
|
3064 |
# XAIF' -> WHIRL' |
# XAIF' -> WHIRL' |
3065 |
ad_input_code_sf.w2f.pre.xb.x2w.B : ad_input_code_sf.w2f.pre.xb.xaif xaif2whirl |
ad_input_code_sf.w2f.pre.xb.x2w.B : ad_input_code_sf.w2f.pre.xb.xaif xaif2whirl |
3066 |
./xaif2whirl --debug 1 --structured ad_input_code_sf.w2f.pre.B \$< |
./xaif2whirl --debug 1 ad_input_code_sf.w2f.pre.B \$< |
3067 |
|
|
3068 |
# WHIRL' -> F' |
# WHIRL' -> F' |
3069 |
ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.B whirl2f whirl2f_be |
ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.B whirl2f whirl2f_be |
3073 |
ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90 ../OAD_support/insertTemplateDir.bash |
ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90 ../OAD_support/insertTemplateDir.bash |
3074 |
../OAD_support/insertTemplateDir.bash \$< \$@ |
../OAD_support/insertTemplateDir.bash \$< \$@ |
3075 |
|
|
3076 |
|
PPEXTRAS=\$(wildcard ../OAD_support/ad_template.*.F) ../OAD_support/ad_inline.F |
3077 |
# postprocess F' |
# postprocess F' |
3078 |
ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.pp.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90 multi-pp.pl ../OAD_support/ad_inline.f \$(wildcard ../OAD_support/ad_template.*.f) |
postProcess.tag: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90 postProcess.py \$(PPEXTRAS:.F=.f) |
3079 |
perl multi-pp.pl -inline=../OAD_support/ad_inline.f \$< |
# the target is a placeholder to signal execution of the rule |
3080 |
# the postprocessor still gets the name wrong |
touch \$@ |
3081 |
cat \$<.pp | sed 's/RETURN//' > \$@ |
# this step also creates the file postProcess.make but we cannot |
3082 |
|
# name it as the target or else make will try to remake it for |
3083 |
# extract all transformed modules |
# the include directive above for any rule, e.g. make clean |
3084 |
all_mods.xb.x2w.w2f.pp.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.pp.f$FS90 |
./postProcess.py --progress --timing -m r -i ../OAD_support/ad_inline.f --width 4 \$< |
|
cat \$< | sed -n '/MODULE /,/END MODULE/p' > \$@ |
|
|
|
|
|
# remove the transformed globals module from the |
|
|
# transformed ad_input_code file |
|
|
# and remove for now the duplicate variables |
|
|
# and fix 2 data statements |
|
|
ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.pp.f$FS90 |
|
|
cat \$< | sed '/MODULE /,/END MODULE/d' | sed '/^ INTEGER(w2f__i4) DOLOOP_UB/d' > \$@ |
|
3085 |
|
|
3086 |
# setup some links |
# setup some links |
3087 |
%.xsd: |
%.xsd: |
3097 |
whirl2xaif xaif2whirl: |
whirl2xaif xaif2whirl: |
3098 |
\$(LN) \${OPENADFORTTK}/bin/\$@ . |
\$(LN) \${OPENADFORTTK}/bin/\$@ . |
3099 |
|
|
3100 |
%.pl: |
preProcess.py postProcess.py: |
|
\$(LN) \${OPENADFORTTK}/bin/\$@ . |
|
|
|
|
|
preProcess.py: |
|
3101 |
\$(LN) \${OPENADFORTTK_BASE}/tools/SourceProcessing/\$@ . |
\$(LN) \${OPENADFORTTK_BASE}/tools/SourceProcessing/\$@ . |
3102 |
|
|
3103 |
whirl2f whirl2f_be: |
whirl2f whirl2f_be: |
3104 |
\$(LN) \${OPEN64ROOT}/whirl2f/\$@ . |
\$(LN) \${OPEN64ROOT}/whirl2f/\$@ . |
3105 |
|
|
3106 |
openad_adm: |
oadDriver: |
3107 |
\$(LN) \${XAIFBOOSTERROOT}/xaifBooster/algorithms/BasicBlockPreaccumulationReverse/test/t \$@ |
\$(LN) \${XAIFBOOSTERROOT}/xaifBooster/algorithms/BasicBlockPreaccumulationReverse/driver/oadDriver \$@ |
3108 |
|
|
3109 |
|
AD_CLEAN += *_mod.h *_mod.F90 *.FF90 *.mod-whirl temp.sed oad_cp.* postProcess.make postProcess.tag postProcess.comp |
3110 |
|
|
3111 |
# ============ end OpenAD specific section ============== |
# ============ end OpenAD specific section ============== |
3112 |
|
|