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Revision 1.147 - (hide annotations) (download)
Fri May 5 19:00:28 2006 UTC (13 years, 6 months ago) by ce107
Branch: MAIN
Changes since 1.146: +39 -3 lines
Updates to support PCL performance counters, fix real*4 bug for PAPIS
and enhance PAPI counter support (including IPC per timestep output)

1 edhill 1.86 #! /usr/bin/env bash
2 edhill 1.1 #
3 ce107 1.147 # $Header: /u/gcmpack/MITgcm/tools/genmake2,v 1.146 2006/04/07 02:53:55 edhill Exp $
4 edhill 1.1 #
5     # Makefile generator for MITgcm UV codes
6     # created by cnh 03/98
7     # adapted by aja 06/98
8     # modified by aja 01/00
9     # rewritten in bash by eh3 08/03
10    
11 edhill 1.12 # Search for particular CPP #cmds associated with packages
12     # usage: test_for_package_in_cpp_options CPP_file package_name
13     test_for_package_in_cpp_options() {
14     cpp_options=$1
15     pkg=$2
16 edhill 1.146 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg[ ]"
17     test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg[ ]"
18     test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg[ ]"
19     test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg[ ]"
20     test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg$"
21     test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg$"
22     test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg$"
23     test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg$"
24 adcroft 1.52 }
25    
26     # Search for particular CPP #cmds associated with MPI
27     # usage: test_for_mpi_in_cpp_eeoptions CPP_file
28     test_for_mpi_in_cpp_eeoptions() {
29     cpp_options=$1
30 edhill 1.146 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI[ ]"
31     test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI[ ]"
32     test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI[ ]"
33     test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI[ ]"
34     test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI$"
35     test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI$"
36     test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI$"
37     test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI$"
38 adcroft 1.52 }
39    
40     # Search for particular string in a file. Return 1 if detected, 0 if not
41     # usage: test_for_string_in_file file string
42     test_for_string_in_file() {
43     file=$1
44     strng=$2
45     grep -i "$strng" $file > /dev/null 2>&1
46 edhill 1.12 RETVAL=$?
47     if test "x${RETVAL}" = x0 ; then
48 edhill 1.71 printf "Error: In $file there is an illegal line: "
49 adcroft 1.52 grep -i "$strng" $file
50 edhill 1.146 exit 99
51 edhill 1.12 fi
52 adcroft 1.52 return 0
53 edhill 1.12 }
54    
55     # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to
56     # the package list.
57     expand_pkg_groups() {
58     new_packages=
59     PKG_GROUPS=$ROOTDIR"/pkg/pkg_groups"
60     if test -r $PKG_GROUPS ; then
61     cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp
62 edhill 1.15 cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp
63 edhill 1.12 matched=0
64     for i in $PACKAGES ; do
65     line=`grep "^ *$i" ./p2.tmp`
66     RETVAL=$?
67     if test "x$RETVAL" = x0 ; then
68     matched=1
69 edhill 1.15 replace=`echo $line | $AWK '{ $1=""; $2=""; print $0 }'`
70 edhill 1.12 echo " replacing \"$i\" with: $replace"
71     new_packages="$new_packages $replace"
72     else
73     new_packages="$new_packages $i"
74     fi
75     done
76     PACKAGES=$new_packages
77     rm -f ./p[1,2].tmp
78 adcroft 1.74 return $matched
79 edhill 1.12 else
80     echo "Warning: can't read package groups definition file: $PKG_GROUPS"
81     fi
82     }
83 edhill 1.1
84 edhill 1.75 # Check for broken environments (eg. cygwin, MacOSX w/HFS+) that
85     # cannot distinguish [*.F/*.F90] from [*.f/*.f90] files.
86     check_for_broken_Ff() {
87 edhill 1.76 # Do we have defaults for $FS and/or $FS90 ?
88     tfs=f
89     tfs9=f90
90     if test "x$FS" != x ; then
91     tfs="$FS"
92     fi
93     if test "x$FS90" != x ; then
94     tfs9="$FS90"
95     fi
96    
97 edhill 1.75 # First check the ability to create a *.F/.f pair.
98 edhill 1.76 cat <<EOF >> genmake_hello.F
99 edhill 1.75 program hello
100     write(*,*) 'hi'
101     stop
102     end
103     EOF
104 edhill 1.76 cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1
105 edhill 1.75 RETVAL=$?
106     if test "x$RETVAL" != x0 ; then
107 edhill 1.76 if test "x$FS" = x ; then
108 edhill 1.77 FS='for'
109     FS90='fr9'
110 edhill 1.76 check_for_broken_Ff
111     else
112     cat <<EOF 2>&1
113     ERROR: Your file system cannot distinguish between *.F and *.f files
114     (fails the "cp" test) and this program cannot find a suitable
115     replacement extension. Please try a different build environment or
116     contact the <MITgcm-support@mitgcm.org> list for help.
117    
118     EOF
119     exit -1
120     fi
121 edhill 1.75 return
122     fi
123 edhill 1.76 rm -f genmake_hello.*
124 edhill 1.75
125 edhill 1.76 # Check the ability of ${MAKE} and ${LN} to use the current set
126     # of extensions.
127     cat <<EOF >> genmake_hello.F
128     program hello
129     write(*,*) 'hi'
130     stop
131     end
132     EOF
133 edhill 1.119 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
134     cat <<EOF >> $MAKEFILE
135 edhill 1.75 .SUFFIXES:
136 edhill 1.101 .SUFFIXES: .$tfs .F
137     .F.$tfs:
138     $LN \$< \$@
139 edhill 1.75 EOF
140 edhill 1.76 $MAKE "genmake_hello."$tfs > /dev/null 2>&1
141 edhill 1.75 RETVAL=$?
142 edhill 1.88 if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then
143 edhill 1.76 if test "x$FS" = x ; then
144 edhill 1.77 FS='for'
145     FS90='fr9'
146 edhill 1.76 check_for_broken_Ff
147     else
148     cat <<EOF 2>&1
149     ERROR: Your file system cannot distinguish between *.F and *.f files
150     (fails the "make/ln" test) and this program cannot find a suitable
151     replacement extension. Please try a different build environment or
152     contact the <MITgcm-support@mitgcm.org> list for help.
153    
154     EOF
155     exit -1
156     return
157     fi
158 edhill 1.75 fi
159 edhill 1.119 rm -f genmake_hello.* $MAKEFILE
160     test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
161 edhill 1.75
162 edhill 1.76 # If we make it here, use the extensions
163     FS=$tfs
164     FS90=$tfs9
165     return
166 edhill 1.75 }
167    
168    
169 edhill 1.84 look_for_makedepend() {
170 adcroft 1.33
171 edhill 1.69 # The "original" makedepend is part of the Imake system that is
172     # most often distributed with XFree86 or with an XFree86 source
173     # package. As a result, many machines (eg. generic Linux) do not
174     # have a system-default "makedepend" available. For those
175     # systems, we have two fall-back options:
176     #
177     # 1) a makedepend implementation shipped with the cyrus-imapd
178     # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
179     #
180     # 2) a known-buggy xmakedpend shell script
181     #
182     # So the choices are, in order:
183     #
184     # 1) use the user-specified program
185     # 2) use a system-wide default
186     # 3) locally build and use the cyrus implementation
187     # 4) fall back to the buggy local xmakedpend script
188     #
189 adcroft 1.33 if test "x${MAKEDEPEND}" = x ; then
190 edhill 1.85 which makedepend > /dev/null 2>&1
191     RV0=$?
192 edhill 1.119 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
193     # echo 'MAKEFILE="'$MAKEFILE'"'
194     cat <<EOF >> $MAKEFILE
195     # THIS IS A TEST MAKEFILE GENERATED BY "genmake2"
196     #
197     # Some "makedepend" implementations will die if they cannot
198     # find a Makefile -- so this file is here to gives them an
199     # empty one to find and parse.
200     EOF
201 edhill 1.85 cat <<EOF >> genmake_tc.f
202 edhill 1.77 program test
203     write(*,*) 'test'
204     stop
205     end
206     EOF
207 edhill 1.85 makedepend genmake_tc.f > /dev/null 2>&1
208 mlosch 1.120 RV1=$?
209 edhill 1.119 test -f $MAKEFILE && rm -f $MAKEFILE
210     test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
211 edhill 1.85 if test "x${RV0}${RV1}" = x00 ; then
212     MAKEDEPEND=makedepend
213     else
214     echo " a system-default makedepend was not found."
215    
216     # Try to build the cyrus implementation
217 edhill 1.90 build_cyrus_makedepend
218 edhill 1.85 RETVAL=$?
219 edhill 1.90 if test "x$RETVAL" != x0 ; then
220 edhill 1.85 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
221     fi
222     rm -f ./genmake_cy_md
223     fi
224 edhill 1.90 else
225     # echo "MAKEDEPEND=${MAKEDEPEND}"
226     echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1
227     RETVAL=$?
228     if test x"$RETVAL" = x0 ; then
229     build_cyrus_makedepend
230     fi
231 edhill 1.1 fi
232 edhill 1.84 }
233    
234    
235 edhill 1.90 build_cyrus_makedepend() {
236     rm -f ./genmake_cy_md
237     (
238     cd $ROOTDIR/tools/cyrus-imapd-makedepend \
239     && ./configure > /dev/null 2>&1 \
240     && make > /dev/null 2>&1
241     if test -x ./makedepend.exe ; then
242     $LN ./makedepend.exe ./makedepend
243     fi
244     ./makedepend ifparser.c > /dev/null 2>&1 \
245     && echo "true"
246     ) > ./genmake_cy_md
247     grep true ./genmake_cy_md > /dev/null 2>&1
248     RETVAL=$?
249     rm -f ./genmake_cy_md
250     if test "x$RETVAL" = x0 ; then
251     MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
252     return 0
253     else
254     echo "WARNING: unable to build cyrus-imapd-makedepend"
255     return 1
256     fi
257     }
258    
259 edhill 1.141
260     build_embed_encode()
261     {
262     printf " building the embed-encode utility... "
263     if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then
264     if test ! -d "$ROOTDIR/tools/embed_encode" ; then
265     echo
266     echo " Error: can't locate \"$ROOTDIR/tools/embed_encode\""
267     echo
268     EMBED_SRC=f
269     return 1
270     fi
271     clist="cc gcc c89 $CC"
272     for ic in $clist ; do
273     comm="$ic -o encode_files encode_files.c"
274     ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1
275     RETVAL=$?
276     if test "x$RETVAL" = x0 ; then
277     echo "OK"
278     DEFINES="$DEFINES -DHAVE_EMBED_SRC"
279     return 0
280     fi
281     done
282     echo
283     echo " Error: unable to build $ROOTDIR/embed_encode/encode_files"
284     echo " so it has been disabled"
285     echo
286     EMBED_SRC=f
287     return 1
288     fi
289     echo "OK"
290     DEFINES="$DEFINES -DHAVE_EMBED_SRC"
291     }
292    
293    
294 edhill 1.84 # Guess possible config options for this host
295     find_possible_configs() {
296    
297     tmp1=`uname`"_"`uname -m`
298     tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
299     tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
300     tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
301     tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
302     tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'`
303     PLATFORM=$tmp3
304     echo $PLATFORM | grep cygwin > /dev/null 2>&1 && PLATFORM=cygwin_ia32
305     OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
306     echo " The platform appears to be: $PLATFORM"
307    
308     echo "test" > test
309     ln -s ./test link
310     RETVAL=$?
311     if test "x${RETVAL}" = x0 ; then
312     LN="ln -s"
313     else
314     echo "Error: \"ln -s\" does not appear to work on this system!"
315     echo " For help, please contact <MITgcm-support@mitgcm.org>."
316     exit 1
317     fi
318     rm -f test link
319    
320     if test "x$CPP" = x ; then
321     CPP="cpp -traditional -P"
322     fi
323    
324     look_for_makedepend
325 edhill 1.1
326 edhill 1.91 #================================================================
327     # look for possible C compilers
328     tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc"
329     p_CC=
330     for c in $tmp ; do
331     rm -f ./genmake_hello.c ./genmake_hello
332     cat >> genmake_hello.c << EOF
333     #include <stdio.h>
334     int main(int argc, char **argv) {
335     printf("Hello!\n");
336     return 0;
337     }
338     EOF
339     $c -o genmake_hello genmake_hello.c > /dev/null 2>&1
340     RETVAL=$?
341     if test "x${RETVAL}" = x0 ; then
342     p_CC="$p_CC $c"
343     fi
344     done
345     rm -f ./genmake_hello.c ./genmake_hello
346     if test "x${p_CC}" = x ; then
347     cat 1>&2 <<EOF
348    
349     Error: No C compilers were found in your path. Please specify one using:
350    
351     1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
352     2) the CC or MITGCM_CC environment variables.
353    
354     EOF
355     exit 1
356     else
357     echo " The possible C compilers found in your path are:"
358     echo " "$p_CC
359     if test "x$CC" = x ; then
360     CC=`echo $p_CC | $AWK '{print $1}'`
361     echo " Setting C compiler to: "$CC
362     fi
363     fi
364    
365     #================================================================
366     # look for possible FORTRAN compilers
367 edhill 1.123 tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95 gfortran"
368 edhill 1.1 p_FC=
369 edhill 1.11 for c in $tmp ; do
370     rm -f ./hello.f ./hello
371     cat >> hello.f <<EOF
372     program hello
373     do i=1,3
374     print *, 'hello world : ', i
375     enddo
376     end
377     EOF
378     $c -o hello hello.f > /dev/null 2>&1
379 edhill 1.1 RETVAL=$?
380     if test "x${RETVAL}" = x0 ; then
381     p_FC="$p_FC $c"
382     fi
383     done
384 edhill 1.21 rm -f ./hello.f ./hello
385 edhill 1.1 if test "x${p_FC}" = x ; then
386 edhill 1.11 cat 1>&2 <<EOF
387    
388     Error: No Fortran compilers were found in your path. Please specify one using:
389    
390     1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
391     2) a command-line option (eg. "-fc NAME"), or
392 edhill 1.91 3) the FC or MITGCM_FC environment variables.
393 edhill 1.11
394     EOF
395     exit 1
396 edhill 1.1 else
397 edhill 1.11 echo " The possible FORTRAN compilers found in your path are:"
398     echo " "$p_FC
399 edhill 1.136 fi
400    
401     # Use the first of the compilers found in the current PATH
402     # that has a correctly-named optfile
403     if test "x$OPTFILE" = x -a "x$FC" = x ; then
404     for i in $p_FC ; do
405     OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
406     if test -r $OPTFILE ; then
407     echo " Setting OPTFILE to: "$OPTFILE
408     break
409     fi
410     done
411 edhill 1.1 fi
412    
413 adcroft 1.67 if test "x$OPTFILE" = x ; then
414     OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
415     if test ! -r $OPTFILE ; then
416     echo " I looked for the file "$OPTFILE" but did not find it"
417     fi
418     fi
419     # echo " The options file: $p_OF"
420     # echo " appears to match so we'll use it."
421     # for i in $p_FC ; do
422     #p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
423     #if test -r $p_OF ; then
424     # OPTFILE=$p_OF
425     # echo " The options file: $p_OF"
426     # echo " appears to match so we'll use it."
427     # break
428     #fi
429     # done
430 edhill 1.11 if test "x$OPTFILE" = x ; then
431     cat 1>&2 <<EOF
432    
433     Error: No options file was found in: $ROOTDIR/tools/build_options/
434     that matches this platform ("$PLATFORM") and the compilers found in
435     your path. Please specify an "optfile" using:
436    
437     1) the command line (eg. "-optfile=path/to/OPTFILE"), or
438     2) the MITGCM_OF environment variable.
439    
440     If you need help, please contact the developers at <MITgcm-support@mitgcm.org>.
441    
442 edhill 1.1 EOF
443 edhill 1.11 exit 1
444 edhill 1.1 fi
445 edhill 1.11
446     # # look for possible MPI libraries
447     # mpi_libs=
448     # mpi_fort=`which mpif77 2>/dev/null`
449     # RETVAL=$?
450     # if test "x${RETVAL}" = x0 ; then
451     # cat >>test.f <<EOF
452     # PROGRAM HELLO
453     # DO 10, I=1,10
454     # PRINT *,'Hello World'
455     # 10 CONTINUE
456     # STOP
457     # END
458     # EOF
459     # eval "$mpi_fort -showme test.f > out"
460     # RETVAL=$?
461     # if test "x${RETVAL}" = x0 ; then
462     # a=`cat out`
463     # for i in $a ; do
464     # case $i in
465     # -*)
466     # mpi_libs="$mpi_libs $i" ;;
467     # esac
468     # done
469     # echo "The MPI libs appear to be:"
470     # echo " "$mpi_libs
471     # fi
472     # rm -f test.f out
473     # fi
474 edhill 1.1
475     }
476    
477     # Parse the package dependency information
478     get_pdepend_list() {
479    
480     # strip the comments and then convert the dependency file into
481     # two arrays: PNAME, DNAME
482     cat $1 | sed -e 's/#.*$//g' \
483 edhill 1.15 | $AWK 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \
484 edhill 1.1 > ./.pd_tmp
485 edhill 1.34 . ./.pd_tmp
486 edhill 1.1 rm -f ./.pd_tmp
487    
488 edhill 1.71 printf "PNAME = "${}
489 edhill 1.1 }
490    
491    
492     # Explain usage
493     usage() {
494 edhill 1.41 cat <<EOF
495    
496     Usage: "$0" [OPTIONS]
497     where [OPTIONS] can be:
498    
499     -help | --help | -h | --h
500     Print this help message and exit.
501 edhill 1.79
502     -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
503     -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
504     Use "NAME" as the adoptfile. By default, the file at
505     "tools/adjoint_options/adjoint_default" will be used.
506 edhill 1.41
507     -nooptfile | --nooptfile
508     -optfile NAME | --optfile NAME | -of NAME | --of NAME
509     -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
510     Use "NAME" as the optfile. By default, an attempt will be
511     made to find an appropriate "standard" optfile in the
512     tools/build_options/ directory.
513    
514     -pdepend NAME | --pdepend NAME
515     -pdepend=NAME | --pdepend=NAME
516     Get package dependency information from "NAME".
517    
518     -pdefault NAME | --pdefault NAME
519     -pdefault=NAME | --pdefault=NAME
520     Get the default package list from "NAME".
521    
522     -make NAME | -m NAME
523     --make=NAME | -m=NAME
524     Use "NAME" for the MAKE program. The default is "make" but
525     many platforms, "gmake" is the preferred choice.
526    
527     -makefile NAME | -mf NAME
528     --makefile=NAME | -mf=NAME
529     Call the makefile "NAME". The default is "Makefile".
530    
531 edhill 1.69 -makedepend NAME | -md NAME
532     --makedepend=NAME | -md=NAME
533     Use "NAME" for the MAKEDEPEND program.
534    
535 edhill 1.41 -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
536     -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
537     Specify the location of the MITgcm ROOTDIR as "NAME".
538     By default, genamke will try to find the location by
539     looking in parent directories (up to the 5th parent).
540    
541     -mods NAME | --mods NAME | -mo NAME | --mo NAME
542     -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME
543     Here, "NAME" specifies a list of directories that are
544     used for additional source code. Files found in the
545     "mods list" are given preference over files of the same
546     name found elsewhere.
547    
548     -disable NAME | --disable NAME
549     -disable=NAME | --disable=NAME
550     Here "NAME" specifies a list of packages that we don't
551     want to use. If this violates package dependencies,
552     genamke will exit with an error message.
553    
554     -enable NAME | --enable NAME
555     -enable=NAME | --enable=NAME
556     Here "NAME" specifies a list of packages that we wish
557     to specifically enable. If this violates package
558     dependencies, genamke will exit with an error message.
559    
560     -standarddirs NAME | --standarddirs NAME
561     -standarddirs=NAME | --standarddirs=NAME
562     Here, "NAME" specifies a list of directories to be
563     used as the "standard" code.
564    
565     -fortran NAME | --fortran NAME | -fc NAME | --fc NAME
566     -fc=NAME | --fc=NAME
567     Use "NAME" as the fortran compiler. By default, genmake
568     will search for a working compiler by trying a list of
569     "usual suspects" such as g77, f77, etc.
570    
571 edhill 1.91 -cc NAME | --cc NAME | -cc=NAME | --cc=NAME
572     Use "NAME" as the C compiler. By default, genmake
573     will search for a working compiler by trying a list of
574     "usual suspects" such as gcc, c89, cc, etc.
575    
576 edhill 1.41 -[no]ieee | --[no]ieee
577     Do or don't use IEEE numerics. Note that this option
578     *only* works if it is supported by the OPTFILE that
579     is being used.
580    
581 edhill 1.143 -ignoretime | -ignore_time | --ignoretime | --ignore_time
582     Ignore all the "wall clock" routines entirely. This will
583     not in any way hurt the model results -- it simply means
584     that the code that checks how long the model spends in
585     various routines will give junk values.
586    
587 ce107 1.126 -ts | --ts
588     Produce timing information per timestep
589 ce107 1.139 -papis | --papis
590 ce107 1.147 Produce summary MFlop/s (and IPC) with PAPI per timestep
591     -pcls | --pcls
592     Produce summary MFlop/s etc. with PCL per timestep
593 ce107 1.139 -foolad | --foolad
594     Fool the AD code generator
595     -papi | --papi
596     Performance analysis with PAPI
597 ce107 1.147 -pcl | --pcl
598     Performance analysis with PCL
599 ce107 1.139 -hpmt | --hpmt
600     Performance analysis with the HPM Toolkit
601    
602     -gsl | --gsl
603     Use GSL to control floating point rounding and precision
604 ce107 1.126
605 adcroft 1.67 -mpi | --mpi
606     Include MPI header files and link to MPI libraries
607     -mpi=PATH | --mpi=PATH
608     Include MPI header files and link to MPI libraries using MPI_ROOT
609 edhill 1.95 set to PATH. i.e. Include files from \$PATH/include, link to libraries
610     from \$PATH/lib and use binaries from \$PATH/bin.
611 adcroft 1.67
612 edhill 1.141 -es | --es | -embed-source | --embed-source
613     Embed a tarball containing the full source code
614     (including the Makefile, etc.) used to build the
615     executable [off by default]
616    
617 edhill 1.71 -bash NAME
618     Explicitly specify the Bourne or BASH shell to use
619    
620 edhill 1.41 While it is most often a single word, the "NAME" variables specified
621     above can in many cases be a space-delimited string such as:
622    
623     --enable pkg1 --enable 'pkg1 pkg2' --enable 'pkg1 pkg2 pkg3'
624     -mods=dir1 -mods='dir1' -mods='dir1 dir2 dir3'
625     -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'
626    
627     which, depending upon your shell, may need to be single-quoted.
628    
629     For more detailed genmake documentation, please see:
630    
631     http://mitgcm.org/devel_HOWTO/
632    
633     EOF
634    
635 edhill 1.1 exit 1
636     }
637    
638 edhill 1.31 # Build a CPP macro to automate calling C routines from FORTRAN
639     get_fortran_c_namemangling() {
640 edhill 1.89
641     #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\""
642     if test ! "x$FC_NAMEMANGLE" = x ; then
643     return 0
644     fi
645    
646 edhill 1.31 default_nm="#define FC_NAMEMANGLE(X) X ## _"
647    
648     cat > genmake_test.c <<EOF
649     void tcall( char * string ) { tsub( string ); }
650     EOF
651 edhill 1.39 $MAKE genmake_test.o >> genmake_warnings 2>&1
652 edhill 1.31 RETVAL=$?
653     if test "x$RETVAL" != x0 ; then
654     FC_NAMEMANGLE=$default_nm
655 edhill 1.39 cat <<EOF>> genmake_errors
656    
657     WARNING: C test compile fails
658     WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
659     WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
660     EOF
661 edhill 1.31 return 1
662     fi
663 edhill 1.91 c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
664 edhill 1.31 RETVAL=$?
665     if test "x$RETVAL" != x0 ; then
666     FC_NAMEMANGLE=$default_nm
667 edhill 1.39 cat <<EOF>> genmake_warnings
668    
669     WARNING: The "nm" command failed.
670     WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
671     WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
672     EOF
673 edhill 1.31 return 1
674     fi
675 edhill 1.118 cat > genmake_tcomp.$FS <<EOF
676 edhill 1.31 subroutine tcall( string )
677     character*(*) string
678     call tsub( string )
679     end
680     EOF
681 edhill 1.134 $FC $FFLAGS -c genmake_tcomp.$FS >> genmake_warnings 2>&1
682 edhill 1.31 RETVAL=$?
683     if test "x$RETVAL" != x0 ; then
684     FC_NAMEMANGLE=$default_nm
685 edhill 1.39 cat <<EOF>> genmake_warnings
686    
687     WARNING: FORTRAN test compile fails -- please see "genmake_errors"
688     WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
689     WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
690     EOF
691 edhill 1.31 return 1
692     fi
693 edhill 1.91 f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
694 edhill 1.31 RETVAL=$?
695     if test "x$RETVAL" != x0 ; then
696     FC_NAMEMANGLE=$default_nm
697 edhill 1.39 cat <<EOF>> genmake_warnings
698    
699     WARNING: The "nm" command failed.
700     WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
701     WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
702     EOF
703 edhill 1.31 return 1
704     fi
705    
706     c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
707     f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
708     c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
709     f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
710    
711     nmangle="X"
712     if test "x$c_a" != "x$f_a" ; then
713     comm="echo x$f_a | sed -e 's|x$c_a||'"
714     a=`eval $comm`
715     nmangle="$a ## $nmangle"
716     fi
717     if test "x$c_b" != "x$f_b" ; then
718     comm="echo x$f_b | sed -e 's|x$c_b||'"
719     b=`eval $comm`
720     nmangle="$nmangle ## $b"
721     fi
722    
723     FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) $nmangle"
724 edhill 1.32
725     # cleanup the testing files
726     rm -f genmake_tcomp.* genmake_test.*
727 edhill 1.31 }
728 edhill 1.1
729 edhill 1.39
730     check_HAVE_CLOC() {
731     get_fortran_c_namemangling
732     cat <<EOF > genmake_tc_1.c
733     $FC_NAMEMANGLE
734     #include <stdio.h>
735     #include <stdlib.h>
736     #include <unistd.h>
737     #include <assert.h>
738     #include <sys/time.h>
739     void FC_NAMEMANGLE(cloc) ( double *curtim )
740     {
741     struct timeval tv1;
742     gettimeofday(&tv1 , (void *)NULL );
743     *curtim = (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6);
744     *curtim = *curtim/1.E6;
745     }
746     EOF
747 edhill 1.118 make genmake_tc_1.o >> genmake_warnings 2>&1
748 edhill 1.39 RET_C=$?
749 edhill 1.118 cat <<EOF > genmake_tc_2.$FS
750 edhill 1.39 program hello
751 edhill 1.129 REAL*8 wtime
752 edhill 1.39 external cloc
753     call cloc(wtime)
754     print *," HELLO WORLD", wtime
755 edhill 1.128 end
756 edhill 1.39 EOF
757 edhill 1.118 $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1
758 edhill 1.39 RET_F=$?
759 edhill 1.118 test -x ./genmake_tc && ./genmake_tc >> genmake_warnings 2>&1
760 edhill 1.39 RETVAL=$?
761     if test "x$RETVAL" = x0 ; then
762     HAVE_CLOC=t
763     DEFINES="$DEFINES -DHAVE_CLOC"
764     fi
765     rm -f genmake_tc*
766     }
767    
768    
769 edhill 1.137 check_HAVE_SIGREG() {
770     get_fortran_c_namemangling
771     cat <<EOF > genmake_tc_1.c
772     $FC_NAMEMANGLE
773     #include <stdlib.h>
774     #include <stdio.h>
775     #include <signal.h>
776     #include <errno.h>
777     #include <ucontext.h>
778    
779     int * ip;
780    
781     static void killhandler(
782     unsigned int sn, siginfo_t si, struct ucontext *sc )
783     {
784     *ip = *ip + 1;
785     return;
786     }
787    
788     void FC_NAMEMANGLE(sigreg) (int * aip)
789     {
790 edhill 1.138 struct sigaction s;
791 edhill 1.137 ip = aip;
792     s.sa_flags = SA_SIGINFO;
793     s.sa_sigaction = (void *)killhandler;
794     if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) {
795     printf("Sigaction returned error = %d\n", errno);
796     exit(0);
797     }
798     return;
799     }
800     EOF
801     make genmake_tc_1.o >> genmake_warnings 2>&1
802     RET_C=$?
803     cat <<EOF > genmake_tc_2.$FS
804     program hello
805     integer anint
806     common /iv/ anint
807     external sigreg
808     call sigreg(anint)
809     end
810     EOF
811     echo >> genmake_warnings
812     echo "running: check_HAVE_SIGREG()" >> genmake_warnings
813     cat genmake_tc_2.$FS >> genmake_warnings
814     COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
815     echo $COMM >> genmake_warnings
816     $COMM >> genmake_warnings 2>&1
817     RETVAL=$?
818     if test "x$RETVAL" = x0 ; then
819     HAVE_SIGREG=t
820     DEFINES="$DEFINES -DHAVE_SIGREG"
821     fi
822     rm -f genmake_tc*
823     }
824    
825    
826 edhill 1.130 check_HAVE_SETRLSTK() {
827     get_fortran_c_namemangling
828     cat <<EOF > genmake_tc_1.c
829     $FC_NAMEMANGLE
830     #include <sys/time.h>
831     #include <sys/resource.h>
832     #include <unistd.h>
833     void FC_NAMEMANGLE(setrlstk) ()
834     {
835     struct rlimit rls;
836     rls.rlim_cur = RLIM_INFINITY;
837     rls.rlim_max = RLIM_INFINITY;
838     setrlimit(RLIMIT_STACK, &rls);
839     return;
840     }
841     EOF
842     make genmake_tc_1.o >> genmake_warnings 2>&1
843     RET_C=$?
844     cat <<EOF > genmake_tc_2.$FS
845     program hello
846     external setrlstk
847     call setrlstk()
848     end
849     EOF
850 edhill 1.135 echo >> genmake_warnings
851     echo "running: check_HAVE_SETRLSTK()" >> genmake_warnings
852     cat genmake_tc_2.$FS >> genmake_warnings
853     COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
854     echo $COMM >> genmake_warnings
855     $COMM >> genmake_warnings 2>&1
856 edhill 1.130 RETVAL=$?
857     if test "x$RETVAL" = x0 ; then
858     HAVE_SETRLSTK=t
859     DEFINES="$DEFINES -DHAVE_SETRLSTK"
860     fi
861     rm -f genmake_tc*
862     }
863    
864    
865 edhill 1.108 check_HAVE_STAT() {
866     get_fortran_c_namemangling
867     cat <<EOF > genmake_tc_1.c
868     $FC_NAMEMANGLE
869     #include <stdio.h>
870     #include <stdlib.h>
871     #include <unistd.h>
872     #include <sys/stat.h>
873     #include <sys/types.h>
874     void FC_NAMEMANGLE(tfsize) ( int *nbyte )
875     {
876     char name[512];
877     struct stat astat;
878    
879     name[0] = 'a'; name[1] = '\0';
880     if (! stat(name, &astat))
881     *nbyte = (int)(astat.st_size);
882     else
883     *nbyte = -1;
884     }
885     EOF
886     make genmake_tc_1.o >> genmake_tc.log 2>&1
887     RET_C=$?
888 edhill 1.118 cat <<EOF > genmake_tc_2.$FS
889 edhill 1.108 program hello
890     integer nbyte
891     call tfsize(nbyte)
892     print *," HELLO WORLD", nbyte
893 edhill 1.128 end
894 edhill 1.108 EOF
895 edhill 1.135 echo >> genmake_warnings
896     echo "running: check_HAVE_STAT()" >> genmake_warnings
897     cat genmake_tc_2.$FS >> genmake_warnings
898     COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
899     echo $COMM >> genmake_warnings
900     $COMM >> genmake_tc.log 2>&1
901 edhill 1.108 RETVAL=$?
902     if test "x$RETVAL" = x0 ; then
903     HAVE_STAT=t
904     DEFINES="$DEFINES -DHAVE_STAT"
905     fi
906     rm -f genmake_tc*
907     }
908    
909    
910 edhill 1.60 check_netcdf_libs() {
911 edhill 1.113 if test ! "x$SKIP_NETCDF_CHECK" = x ; then
912     return
913     fi
914 edhill 1.135 echo >> genmake_warnings
915     echo "running: check_netcdf_libs()" >> genmake_warnings
916 edhill 1.117 cat <<EOF > genmake_tnc.F
917 edhill 1.60 program fgennc
918     #include "netcdf.inc"
919 edhill 1.113 EOF
920     if test ! "x$MPI" = x ; then
921 edhill 1.117 echo '#include "mpif.h"' >> genmake_tnc.F
922 edhill 1.113 fi
923 edhill 1.117 cat <<EOF >> genmake_tnc.F
924 edhill 1.60 integer iret, ncid, xid
925     iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
926     IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
927     iret = nf_def_dim(ncid, 'X', 11, xid)
928     IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
929     iret = nf_close(ncid)
930     IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
931     end
932     EOF
933 edhill 1.135 echo "=== genmake_tnc.F ===" > genmake_tnc.log
934     cat genmake_tnc.F >> genmake_tnc.log
935     echo "=== genmake_tnc.F ===" >> genmake_tnc.log
936 edhill 1.111 RET_CPP=f
937 edhill 1.135 COMM="$CPP $DEFINES $INCLUDES genmake_tnc.F"
938     echo "$COMM" >> genmake_tnc.log
939     $COMM > genmake_tnc.$FS 2>/dev/null && RET_CPP=t
940 edhill 1.111 if test "x$RET_CPP" = xf ; then
941     echo " WARNING: CPP failed to pre-process the netcdf test." \
942 edhill 1.133 >> genmake_tnc.log
943 edhill 1.111 echo " Please check that \$INCLUDES is properly set." \
944 edhill 1.133 >> genmake_tnc.log
945 edhill 1.111 fi
946 edhill 1.135 echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
947     echo " && $LINK -o genmake_tnc.o $LIBS" >> genmake_tnc.log
948 edhill 1.117 $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
949 edhill 1.96 && $LINK -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
950 edhill 1.60 RET_COMPILE=$?
951 edhill 1.135 cat genmake_tnc.log >> genmake_warnings
952 edhill 1.99
953     #EH3 Remove test program execution for machines that either disallow
954     #EH3 execution or cannot support it (eg. cross-compilers)
955     #EH3
956     #EH3 test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1
957     #EH3 RETVAL=$?
958     #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
959    
960     if test "x$RET_COMPILE" = x0 ; then
961 edhill 1.60 HAVE_NETCDF=t
962     else
963 edhill 1.66 # try again with "-lnetcdf" added to the libs
964 edhill 1.135 echo "try again with added '-lnetcdf'" > genmake_tnc.log
965 edhill 1.133 echo "$CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS \ " >> genmake_tnc.log
966     echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
967     echo " && $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
968 edhill 1.117 $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null \
969     && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
970 edhill 1.99 && $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
971 edhill 1.66 RET_COMPILE=$?
972 edhill 1.135 cat genmake_tnc.log >> genmake_warnings
973 edhill 1.99 if test "x$RET_COMPILE" = x0 ; then
974 edhill 1.66 LIBS="$LIBS -lnetcdf"
975     HAVE_NETCDF=t
976     fi
977 edhill 1.60 fi
978     rm -f genmake_tnc*
979     }
980    
981    
982 adcroft 1.67
983     ###############################################################################
984     # Sequential part of script starts here
985     ###############################################################################
986    
987 edhill 1.1 # Set defaults here
988 edhill 1.5 COMMANDL="$0 $@"
989    
990 edhill 1.1 PLATFORM=
991     LN=
992     S64=
993     KPP=
994 edhill 1.114 #FC=
995 edhill 1.93 #CC=gcc
996 edhill 1.114 #CPP=
997 edhill 1.1 LINK=
998 edhill 1.31 DEFINES=
999 edhill 1.1 PACKAGES=
1000     ENABLE=
1001     DISABLE=
1002 edhill 1.119 # MAKEFILE=
1003     # MAKEDEPEND=
1004 edhill 1.1 PDEPEND=
1005 edhill 1.11 DUMPSTATE=t
1006 edhill 1.1 PDEFAULT=
1007     OPTFILE=
1008 edhill 1.111 INCLUDES="-I. $INCLUDES"
1009 edhill 1.1 FFLAGS=
1010     FOPTIM=
1011     CFLAGS=
1012     KFLAGS1=
1013     KFLAGS2=
1014 edhill 1.70 #LDADD=
1015 edhill 1.1 LIBS=
1016     KPPFILES=
1017     NOOPTFILES=
1018     NOOPTFLAGS=
1019 adcroft 1.67 MPI=
1020     MPIPATH=
1021 ce107 1.126 TS=
1022 ce107 1.139 PAPIS=
1023 ce107 1.147 PCLS=
1024 ce107 1.139 FOOLAD=
1025     PAPI=
1026 ce107 1.147 PCL=
1027 ce107 1.139 HPMT=
1028     GSL=
1029 edhill 1.131 HAVE_TEST_L=
1030 edhill 1.1
1031 edhill 1.124 # DEFINES checked by test compilation or command-line
1032 edhill 1.29 HAVE_SYSTEM=
1033     HAVE_FDATE=
1034     FC_NAMEMANGLE=
1035 edhill 1.39 HAVE_CLOC=
1036 edhill 1.130 HAVE_SETRLSTK=
1037 edhill 1.108 HAVE_STAT=
1038 edhill 1.60 HAVE_NETCDF=
1039 cnh 1.81 HAVE_ETIME=
1040 edhill 1.124 IGNORE_TIME=
1041 edhill 1.29
1042 edhill 1.1 MODS=
1043     TOOLSDIR=
1044     SOURCEDIRS=
1045     INCLUDEDIRS=
1046 edhill 1.57 STANDARDDIRS="USE_THE_DEFAULT"
1047 edhill 1.1
1048 edhill 1.73 G2ARGS=
1049 edhill 1.71 BASH=
1050 edhill 1.1 PWD=`pwd`
1051 edhill 1.114 test "x$MAKE" = x && MAKE=make
1052     test "x$AWK" = x && AWK=awk
1053 edhill 1.141 EMBED_SRC=
1054 edhill 1.97 THISHOST=`hostname`
1055 edhill 1.1 THISCWD=`pwd`
1056     THISDATE=`date`
1057 edhill 1.97 THISUSER=`echo $USER`
1058     THISVER=
1059 edhill 1.1 MACHINE=`uname -a`
1060 edhill 1.7 EXECUTABLE=
1061     EXEHOOK=
1062     EXEDIR=
1063 edhill 1.12 PACKAGES_CONF=
1064     IEEE=
1065     if test "x$MITGCM_IEEE" != x ; then
1066     IEEE=$MITGCM_IEEE
1067     fi
1068 edhill 1.76 FS=
1069     FS90=
1070 edhill 1.1
1071 edhill 1.14 AUTODIFF_PKG_USED=f
1072     AD_OPTFILE=
1073 edhill 1.17 TAF=
1074     AD_TAF_FLAGS=
1075     FTL_TAF_FLAGS=
1076     SVD_TAF_FLAGS=
1077     TAF_EXTRA=
1078     TAMC=
1079     AD_TAMC_FLAGS=
1080     FTL_TAF_FLAGS=
1081     SVD_TAMC_FLAGS=
1082     TAMC_EXTRA=
1083    
1084 edhill 1.14
1085 edhill 1.5 # The following state can be set directly by command-line switches
1086 edhill 1.41 gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
1087 ce107 1.147 gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL MPI JAM DUMPSTATE STANDARDDIRS"
1088 edhill 1.5
1089     # The following state is not directly set by command-line switches
1090     gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
1091     gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
1092 edhill 1.97 gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"
1093 edhill 1.12 gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
1094 cnh 1.81 gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"
1095 edhill 1.5
1096 edhill 1.14 # The following are all related to adjoint/tangent-linear stuff
1097 edhill 1.29 gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
1098     gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"
1099     gm_s12="TAF_EXTRA TAMC_EXTRA"
1100 edhill 1.14
1101 edhill 1.29 gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7"
1102     gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"
1103 edhill 1.5
1104 edhill 1.41 cat <<EOF
1105    
1106     GENMAKE :
1107    
1108     A program for GENerating MAKEfiles for the MITgcm project. For a
1109     quick list of options, use "genmake -h" or for more detail see:
1110    
1111     http://mitgcm.org/devel_HOWTO/
1112    
1113     EOF
1114 edhill 1.5
1115 edhill 1.2 echo "=== Processing options files and arguments ==="
1116 edhill 1.12 gm_local="genmake_local"
1117     for i in . $MODS ; do
1118     if test -r $i/$gm_local ; then
1119 edhill 1.34 . $i/$gm_local
1120 edhill 1.12 break
1121     fi
1122     done
1123 edhill 1.71 printf " getting local config information: "
1124 edhill 1.88 if test -f $gm_local ; then
1125 edhill 1.1 echo "using $gm_local"
1126 edhill 1.34 . $gm_local
1127 edhill 1.2 # echo "DISABLE=$DISABLE"
1128     # echo "ENABLE=$ENABLE"
1129 edhill 1.1 else
1130     echo "none found"
1131     fi
1132    
1133 edhill 1.103 #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
1134 edhill 1.2 #OPTIONS=
1135     #n=0
1136     #for i ; do
1137     # echo "$i $n"
1138     # setvar="OPTIONS[$n]='$i'"
1139     # # echo " $setvar"
1140     # eval "$setvar"
1141     # n=$(( $n + 1 ))
1142     #done
1143     #parse_options
1144     ac_prev=
1145 edhill 1.102 for ac_option in "$@" ; do
1146 edhill 1.2
1147 edhill 1.73 G2ARGS="$G2ARGS \"$ac_option\""
1148    
1149 edhill 1.2 # If the previous option needs an argument, assign it.
1150     if test -n "$ac_prev"; then
1151     eval "$ac_prev=\$ac_option"
1152     ac_prev=
1153     continue
1154     fi
1155    
1156     ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
1157    
1158     case $ac_option in
1159    
1160     -help | --help | -h | --h)
1161     usage ;;
1162    
1163     -nooptfile | --nooptfile)
1164     OPTFILE="NONE" ;;
1165     -optfile | --optfile | -of | --of)
1166 edhill 1.4 ac_prev=OPTFILE ;;
1167 edhill 1.2 -optfile=* | --optfile=* | -of=* | --of=*)
1168     OPTFILE=$ac_optarg ;;
1169    
1170 edhill 1.50 -adoptfile | --adoptfile | -adof | --adof)
1171 edhill 1.14 ac_prev=AD_OPTFILE ;;
1172     -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
1173     AD_OPTFILE=$ac_optarg ;;
1174    
1175 edhill 1.2 -pdepend | --pdepend)
1176 edhill 1.4 ac_prev=PDEPEND ;;
1177 edhill 1.2 -pdepend=* | --pdepend=*)
1178     PDEPEND=$ac_optarg ;;
1179    
1180     -pdefault | --pdefault)
1181 edhill 1.4 ac_prev=PDEFAULT ;;
1182 edhill 1.2 -pdefault=* | --pdefault=*)
1183     PDEFAULT=$ac_optarg ;;
1184    
1185 edhill 1.6 -make | --make | -m | --m)
1186     ac_prev=MAKE ;;
1187     -make=* | --make=* | -m=* | --m=*)
1188     MAKE=$ac_optarg ;;
1189 edhill 1.69
1190 edhill 1.71 -bash | --bash)
1191     ac_prev=BASH ;;
1192     -bash=* | --bash=*)
1193     BASH=$ac_optarg ;;
1194    
1195 edhill 1.69 -makedepend | --makedepend | -md | --md)
1196     ac_prev=MAKEDEPEND ;;
1197     -makedepend=* | --makedepend=* | -md=* | --md=*)
1198     MAKEDEPEND=$ac_optarg ;;
1199 edhill 1.6
1200     -makefile | --makefile | -ma | --ma)
1201 edhill 1.4 ac_prev=MAKEFILE ;;
1202 edhill 1.6 -makefile=* | --makefile=* | -ma=* | --ma=*)
1203 edhill 1.2 MAKEFILE=$ac_optarg ;;
1204    
1205 edhill 1.41 -platform | --platform | -pl | --pl | -platform=* | --platform=* | -pl=* | --pl=*)
1206     echo "ERROR: The platform option has been removed. Please specify"
1207     echo " the build options using the \"optfile\" mechanism."
1208     echo
1209     usage
1210     ;;
1211 edhill 1.2
1212     -rootdir | --rootdir | -rd | --rd)
1213 edhill 1.4 ac_prev=ROOTDIR ;;
1214 edhill 1.2 -rootdir=* | --rootdir=* | -rd=* | --rd=*)
1215     ROOTDIR=$ac_optarg ;;
1216    
1217     -mods | --mods | -mo | --mo)
1218 edhill 1.4 ac_prev=MODS ;;
1219 edhill 1.2 -mods=* | --mods=* | -mo=* | --mo=*)
1220     MODS=$ac_optarg ;;
1221    
1222     -disable | --disable)
1223 edhill 1.4 ac_prev=DISABLE ;;
1224 edhill 1.2 -disable=* | --disable=*)
1225     DISABLE=$ac_optarg ;;
1226    
1227     -enable | --enable)
1228 edhill 1.4 ac_prev=ENABLE ;;
1229 edhill 1.2 -enable=* | --enable=*)
1230     ENABLE=$ac_optarg ;;
1231    
1232 edhill 1.12 -standarddirs | --standarddirs)
1233     ac_prev=STANDARDDIRS ;;
1234     -standarddirs=* | --standarddirs=*)
1235     STANDARDDIRS=$ac_optarg ;;
1236    
1237 edhill 1.2 # -cpp | --cpp)
1238     # ac_prev=cpp ;;
1239     # -cpp=* | --cpp=*)
1240     # CPP=$ac_optarg ;;
1241 edhill 1.91
1242     -cc | --cc)
1243     ac_prev=CC ;;
1244     -cc=* | --cc=*)
1245     CC=$ac_optarg ;;
1246    
1247 edhill 1.2 -fortran | --fortran | -fc | --fc)
1248 edhill 1.4 ac_prev=FC ;;
1249 edhill 1.2 -fc=* | --fc=*)
1250     FC=$ac_optarg ;;
1251    
1252 edhill 1.76 -fs | --fs)
1253     ac_prev=FS ;;
1254     -fs=* | --fs=*)
1255     FS=$ac_optarg ;;
1256    
1257     -fs90 | --fs90)
1258     ac_prev=FS90 ;;
1259     -fs90=* | --fs90=*)
1260     FS90=$ac_optarg ;;
1261    
1262 edhill 1.2 -ieee | --ieee)
1263 edhill 1.12 IEEE=true ;;
1264 edhill 1.2 -noieee | --noieee)
1265 edhill 1.12 IEEE= ;;
1266 adcroft 1.67
1267 ce107 1.126 -ts | --ts)
1268     TS=true ;;
1269 ce107 1.139 -papis | --papis)
1270     PAPIS=true ;;
1271 ce107 1.147 -pcls | --pcls)
1272     PCLS=true ;;
1273 ce107 1.139 -foolad | --foolad)
1274     FOOLAD=true ;;
1275     -papi | --papi)
1276     PAPI=true ;;
1277 ce107 1.147 -pcl | --pcl)
1278     PCL=true ;;
1279 ce107 1.139 -hpmt | --hpmt)
1280     HPMT=true ;;
1281    
1282     -gsl | --gsl)
1283     GSL=true ;;
1284 ce107 1.126
1285 adcroft 1.67 -mpi | --mpi)
1286     MPI=true ;;
1287     -mpi=* | --mpi=*)
1288     MPIPATH=$ac_optarg
1289     MPI=true ;;
1290 edhill 1.2
1291 edhill 1.41 # -jam | --jam)
1292     # JAM=1 ;;
1293     # -nojam | --nojam)
1294     # JAM=0 ;;
1295 edhill 1.2
1296 edhill 1.5 -ds | --ds)
1297     DUMPSTATE=t ;;
1298    
1299 edhill 1.17 -taf_extra | --taf_extra)
1300     ac_prev=TAF_EXTRA ;;
1301     -taf_extra=* | --taf_extra=*)
1302     TAF_EXTRA=$ac_optarg ;;
1303    
1304     -tamc_extra | --tamc_extra)
1305     ac_prev=TAMC_EXTRA ;;
1306     -tamc_extra=* | --tamc_extra=*)
1307     TAMC_EXTRA=$ac_optarg ;;
1308 edhill 1.124
1309     -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1310     IGNORE_TIME="-DIGNORE_TIME" ;;
1311 edhill 1.17
1312 edhill 1.141 -es | --es | -embed-source | --embed-source)
1313     EMBED_SRC=t ;;
1314    
1315 edhill 1.2 -*)
1316     echo "Error: unrecognized option: "$ac_option
1317     usage
1318     ;;
1319    
1320     *)
1321     echo "Error: unrecognized argument: "$ac_option
1322     usage
1323     ;;
1324    
1325     esac
1326    
1327 edhill 1.1 done
1328    
1329 edhill 1.119
1330 edhill 1.12 if test -f ./.genmakerc ; then
1331     echo
1332     echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
1333     echo " file. This file format is no longer supported. Please see:"
1334     echo
1335     echo " http://mitgcm.org/devel_HOWTO/"
1336     echo
1337     echo " for directions on how to setup and use the new \"genmake2\" input"
1338     echo " files and send an email to MITgcm-support@mitgcm.org if you want help."
1339     echo
1340     fi
1341    
1342 edhill 1.97 # Find the MITgcm ${ROOTDIR}
1343 edhill 1.11 if test "x${ROOTDIR}" = x ; then
1344 edhill 1.112 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1345 edhill 1.87 if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then
1346 edhill 1.11 ROOTDIR=".."
1347     else
1348     for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
1349     if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
1350     ROOTDIR=$d
1351 edhill 1.71 printf "Warning: ROOTDIR was not specified but there appears to be"
1352 edhill 1.11 echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."
1353     break
1354     fi
1355     done
1356     fi
1357     fi
1358     if test "x${ROOTDIR}" = x ; then
1359     echo "Error: Cannot determine ROOTDIR for MITgcm code."
1360     echo " Please specify a ROOTDIR using either an options "
1361     echo " file or a command-line option."
1362     exit 1
1363     fi
1364     if test ! -d ${ROOTDIR} ; then
1365     echo "Error: the specified ROOTDIR (\"$ROOTDIR\") does not exist!"
1366     exit 1
1367     fi
1368    
1369 edhill 1.97 # Find the MITgcm ${THISVER}
1370     if test -f "${ROOTDIR}/doc/tag-index" ; then
1371 edhill 1.125 THISVER=`grep '^checkpoint' ${ROOTDIR}/doc/tag-index | head -1`
1372 edhill 1.97 fi
1373    
1374 edhill 1.119 if test "x$MAKEFILE" = x ; then
1375     MAKEFILE="Makefile"
1376     fi
1377    
1378 edhill 1.1 echo " getting OPTFILE information: "
1379     if test "x${OPTFILE}" = x ; then
1380 edhill 1.11 if test "x$MITGCM_OF" = x ; then
1381     echo "Warning: no OPTFILE specified so we'll look for possible settings"
1382     printf "\n=== Searching for possible settings for OPTFILE ===\n"
1383     find_possible_configs
1384 edhill 1.1 else
1385 edhill 1.11 OPTFILE=$MITGCM_OF
1386     fi
1387     fi
1388     if test "x$OPTFILE" != xNONE ; then
1389     if test -f "$OPTFILE" -a -r "$OPTFILE" ; then
1390     echo " using OPTFILE=\"$OPTFILE\""
1391 edhill 1.34 . "$OPTFILE"
1392 edhill 1.11 RETVAL=$?
1393     if test "x$RETVAL" != x0 ; then
1394 edhill 1.71 printf "Error: failed to source OPTFILE \"$OPTFILE\""
1395 edhill 1.11 echo "--please check that variable syntax is bash-compatible"
1396 edhill 1.1 exit 1
1397     fi
1398 edhill 1.11 if test "x$DUMPSTATE" != xf ; then
1399 edhill 1.12 cp -f $OPTFILE "genmake_optfile"
1400 edhill 1.11 fi
1401     else
1402     echo "Error: can't read OPTFILE=\"$OPTFILE\""
1403     exit 1
1404 edhill 1.1 fi
1405     fi
1406 edhill 1.8
1407 edhill 1.14 echo " getting AD_OPTFILE information: "
1408     if test "x${AD_OPTFILE}" = x ; then
1409     if test "x$MITGCM_AD_OF" = x ; then
1410     AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default
1411     else
1412     AD_OPTFILE=$MITGCM_AD_OF
1413     fi
1414     fi
1415     if test "x${AD_OPTFILE}" != xNONE ; then
1416     if test -f "$AD_OPTFILE" -a -r "$AD_OPTFILE" ; then
1417     echo " using AD_OPTFILE=\"$AD_OPTFILE\""
1418 edhill 1.34 . "$AD_OPTFILE"
1419 edhill 1.14 RETVAL=$?
1420     if test "x$RETVAL" != x0 ; then
1421 edhill 1.71 printf "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
1422 edhill 1.14 echo "--please check that variable syntax is bash-compatible"
1423     exit 1
1424     fi
1425     if test "x$DUMPSTATE" != xf ; then
1426     cp -f $AD_OPTFILE "genmake_ad_optfile"
1427     fi
1428     else
1429     echo "Error: can't read AD_OPTFILE=\"$AD_OPTFILE\""
1430     exit 1
1431     fi
1432     fi
1433    
1434 edhill 1.119 #====================================================================
1435     # Set default values if not set by the optfile
1436     #
1437 edhill 1.91 # Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined. If not,
1438 edhill 1.39 # either set defaults or complain and abort!
1439 edhill 1.71 if test ! "x$BASH" = x ; then
1440     # add a trailing space so that it works within the Makefile syntax (see below)
1441     BASH="$BASH "
1442     fi
1443 edhill 1.8 if test "x$FC" = x ; then
1444     cat <<EOF 1>&2
1445    
1446     Error: no Fortran compiler: please specify using one of the following:
1447     1) within the options file ("FC=...") as specified by "-of=OPTFILE"
1448     2) the "-fc=XXX" command-line option
1449 edhill 1.12 3) the "./genmake_local" file
1450 edhill 1.8 EOF
1451     exit 1
1452     fi
1453 edhill 1.91 if test "x$CC" = x ; then
1454 edhill 1.93 CC=cc
1455     # cat <<EOF 1>&2
1456     # Error: no C compiler: please specify using one of the following:
1457     # 1) within the options file ("CC=...") as specified by "-of=OPTFILE"
1458     # 2) the "-cc=XXX" command-line option
1459     # 3) the "./genmake_local" file
1460     # EOF
1461     # exit 1
1462 edhill 1.91 fi
1463 edhill 1.8 if test "x$LINK" = x ; then
1464     LINK=$FC
1465     fi
1466 edhill 1.39 if test "x$MAKE" = x ; then
1467     MAKE="make"
1468     fi
1469 edhill 1.63 if test "x$CPP" = x ; then
1470     CPP=cpp
1471     fi
1472     #EH3 === UGLY ===
1473 edhill 1.76 # The following is an ugly little hack to check for $CPP in /lib/ and
1474     # it should eventually be replaced with a more general function that
1475 edhill 1.63 # searches a combo of the user's path and a list of "usual suspects"
1476     # to find the correct location for binaries such as $CPP.
1477     for i in " " "/lib/" ; do
1478     echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
1479     done
1480     #EH3 === UGLY ===
1481 edhill 1.13 echo "#define A a" | $CPP > test_cpp 2>&1
1482 edhill 1.11 RETVAL=$?
1483     if test "x$RETVAL" != x0 ; then
1484 edhill 1.8 cat <<EOF 1>&2
1485    
1486 edhill 1.11 Error: C pre-processor "$CPP" failed the test case: please specify using:
1487    
1488 edhill 1.8 1) within the options file ("CPP=...") as specified by "-of=OPTFILE"
1489 edhill 1.12 2) the "./genmake_local" file
1490 edhill 1.30 3) with the CPP environment variable
1491 edhill 1.11
1492 edhill 1.8 EOF
1493     exit 1
1494 edhill 1.11 else
1495     rm -f test_cpp
1496 edhill 1.8 fi
1497 edhill 1.84 look_for_makedepend
1498 edhill 1.35 if test "x$LN" = x ; then
1499     LN="ln -s"
1500     fi
1501     echo "test" > genmake_test_ln
1502     $LN genmake_test_ln genmake_tlink
1503     RETVAL=$?
1504     if test "x$RETVAL" != x0 ; then
1505     cat <<EOF 1>&2
1506 edhill 1.29
1507 edhill 1.35 Error: The command "ln -s" failed -- please specify a working soft-link
1508     command in the optfile.
1509    
1510     EOF
1511     exit 1
1512     fi
1513 edhill 1.131 test -L genmake_tlink > /dev/null 2>&1
1514     RETVAL=$?
1515     if test "x$RETVAL" = x0 ; then
1516     HAVE_TEST_L=t
1517     fi
1518 edhill 1.35 rm -f genmake_test_ln genmake_tlink
1519 edhill 1.77
1520     # Check for broken *.F/*.f handling and fix if possible
1521     check_for_broken_Ff
1522 edhill 1.29
1523 adcroft 1.67 if test ! "x$MPI" = x ; then
1524     echo " Turning on MPI cpp macros"
1525 adcroft 1.68 DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1526 adcroft 1.67 fi
1527 edhill 1.39
1528 ce107 1.126 if test ! "x$TS" = x ; then
1529     echo " Turning on timing per timestep"
1530 ce107 1.139 if test ! "x$FOOLAD" = x ; then
1531     DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP"
1532     else
1533     DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1534     fi
1535     fi
1536     if test ! "x$PAPIS" = x ; then
1537     echo " Turning on PAPI flop summary per timestep"
1538     echo " Please make sure PAPIINC, PAPILIB are defined"
1539     if test ! "x$FOOLAD" = x ; then
1540     DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP"
1541     else
1542     DEFINES="$DEFINES -DUSE_PAPI_FLOPS"
1543     fi
1544     INCLUDES="$INCLUDES $PAPIINC"
1545     LIBS="$LIBS $PAPILIB"
1546     fi
1547 ce107 1.147 if test ! "x$PCLS" = x ; then
1548     echo " Turning on PCL counter summary per timestep"
1549     echo " Please make sure PCLINC, PCLLIB are defined"
1550     if test ! "x$FOOLAD" = x ; then
1551     DEFINES="$DEFINES -DUSE_PCL_FLOPS_SFP"
1552     else
1553     DEFINES="$DEFINES -DUSE_PCL_FLOPS"
1554     fi
1555     INCLUDES="$INCLUDES $PCLINC"
1556     LIBS="$LIBS $PCLLIB"
1557     fi
1558 ce107 1.139 if test ! "x$PAPI" = x ; then
1559     if test ! "x$PAPIS" = x ; then
1560     echo " PAPI performance analysis and flop summary per timestep cannot co-exist!"
1561     echo " Sticking with PAPI flop summary per timestep!"
1562     else
1563     echo " Turning on performance analysis with PAPI"
1564     echo " Please make sure PAPIINC, PAPILIB are defined"
1565     DEFINES="$DEFINES -DUSE_PAPI"
1566     INCLUDES="$INCLUDES $PAPIINC"
1567     LIBS="$LIBS $PAPILIB"
1568     fi
1569     fi
1570 ce107 1.147 if test ! "x$PCL" = x ; then
1571     if test ! "x$PCLS" = x ; then
1572     echo " PCL performance analysis and flop summary per timestep cannot co-exist!"
1573     echo " Sticking with PCL flop summary per timestep!"
1574     else
1575     echo " Turning on performance analysis with PCL"
1576     echo " Please make sure PCLINC, PCLLIB are defined"
1577     DEFINES="$DEFINES -DUSE_PCL"
1578     INCLUDES="$INCLUDES $PCLINC"
1579     LIBS="$LIBS $PCLLIB"
1580     fi
1581     fi
1582 ce107 1.139 if test ! "x$HPMT" = x ; then
1583     if test ! "x$PAPI" = x ; then
1584     echo " PAPI and the HPM Toolkit cannot co-exist!"
1585     echo " Sticking with PAPI!"
1586 ce107 1.147 else if test ! "x$PCL" = x ; then
1587     echo " PCL and the HPM Toolkit cannot co-exist!"
1588     echo " Sticking with PCL!"
1589 ce107 1.139 else
1590     echo " Turning on performance analysis with the HPM Toolkit"
1591     echo " Please make sure HPMTINC, HPMTLIB are defined"
1592     DEFINES="$DEFINES -DUSE_LIBHPM"
1593     INCLUDES="$INCLUDES $HPMTINC"
1594     LIBS="$LIBS $HPMTLIB"
1595     fi
1596     fi
1597     if test ! "x$GSL" = x ; then
1598     echo " Turning on use of GSL to control floating point calculations"
1599     echo " Please make sure GSLINC, GSLLIB are defined"
1600     DEFINES="$DEFINES -DUSE_GSL_IEEE"
1601     INCLUDES="$INCLUDES $GSLINC"
1602     LIBS="$LIBS $GSLLIB"
1603 ce107 1.126 fi
1604    
1605 edhill 1.29 printf "\n=== Checking system libraries ===\n"
1606 edhill 1.71 printf " Do we have the system() command using $FC... "
1607 edhill 1.118 cat > genmake_tcomp.$FS <<EOF
1608 edhill 1.29 program hello
1609     call system('echo hi')
1610     end
1611     EOF
1612 edhill 1.134 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1613 edhill 1.29 RETVAL=$?
1614     if test "x$RETVAL" = x0 ; then
1615     HAVE_SYSTEM=t
1616     DEFINES="$DEFINES -DHAVE_SYSTEM"
1617     echo "yes"
1618     else
1619     HAVE_SYSTEM=
1620     echo "no"
1621     fi
1622     rm -f genmake_tcomp*
1623    
1624 edhill 1.71 printf " Do we have the fdate() command using $FC... "
1625 edhill 1.118 cat > genmake_tcomp.$FS <<EOF
1626 edhill 1.29 program hello
1627 edhill 1.129 CHARACTER*(128) string
1628 edhill 1.29 string = ' '
1629     call fdate( string )
1630     print *, string
1631     end
1632     EOF
1633 edhill 1.134 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1634 edhill 1.29 RETVAL=$?
1635     if test "x$RETVAL" = x0 ; then
1636     HAVE_FDATE=t
1637     DEFINES="$DEFINES -DHAVE_FDATE"
1638     echo "yes"
1639     else
1640     HAVE_FDATE=
1641     echo "no"
1642     fi
1643     rm -f genmake_tcomp*
1644    
1645 cnh 1.81 printf " Do we have the etime() command using $FC... "
1646 edhill 1.118 cat > genmake_tcomp.$FS <<EOF
1647 cnh 1.81 program hello
1648 cnh 1.82 REAL*4 ACTUAL, TARRAY(2)
1649     EXTERNAL ETIME
1650     REAL*4 ETIME
1651     actual = etime( tarray )
1652 cnh 1.81 print *, tarray
1653     end
1654     EOF
1655 edhill 1.134 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1656 cnh 1.81 RETVAL=$?
1657     if test "x$RETVAL" = x0 ; then
1658     HAVE_ETIME=t
1659     DEFINES="$DEFINES -DHAVE_ETIME"
1660     echo "yes"
1661     else
1662     HAVE_ETIME=
1663     echo "no"
1664     fi
1665     rm -f genmake_tcomp*
1666    
1667 edhill 1.71 printf " Can we call simple C routines (here, \"cloc()\") using $FC... "
1668 edhill 1.39 check_HAVE_CLOC
1669     if test "x$HAVE_CLOC" != x ; then
1670     echo "yes"
1671     else
1672     echo "no"
1673 edhill 1.141 if test "x$EMBED_SRC" = xt ; then
1674     echo " WARNING: you requested file embedding but it has"
1675     echo " been disabled since C code cannot be called"
1676     EMBED_SRC=
1677     fi
1678 edhill 1.29 fi
1679 edhill 1.39 rm -f genmake_t*
1680 edhill 1.29
1681 edhill 1.130 printf " Can we unlimit the stack size using $FC... "
1682     check_HAVE_SETRLSTK
1683     if test "x$HAVE_SETRLSTK" != x ; then
1684     echo "yes"
1685     else
1686     echo "no"
1687     fi
1688     rm -f genmake_t*
1689    
1690 edhill 1.137 printf " Can we register a signal handler using $FC... "
1691     check_HAVE_SIGREG
1692     if test "x$HAVE_SIGREG" != x ; then
1693     echo "yes"
1694     else
1695     echo "no"
1696     fi
1697     rm -f genmake_t*
1698    
1699 edhill 1.108 printf " Can we use stat() through C calls... "
1700     check_HAVE_STAT
1701     if test "x$HAVE_STAT" != x ; then
1702     echo "yes"
1703     else
1704     echo "no"
1705     fi
1706     rm -f genmake_t*
1707    
1708 edhill 1.71 printf " Can we create NetCDF-enabled binaries... "
1709 edhill 1.60 check_netcdf_libs
1710     if test "x$HAVE_NETCDF" != x ; then
1711     echo "yes"
1712     else
1713     echo "no"
1714     fi
1715 edhill 1.124 DEFINES="$DEFINES $IGNORE_TIME"
1716 edhill 1.8
1717 edhill 1.141 if test "x$EMBED_SRC" = xt ; then
1718     build_embed_encode
1719     fi
1720     if test "x$EMBED_SRC" = xt ; then
1721     ENABLE="$ENABLE embed_files"
1722     fi
1723    
1724    
1725 edhill 1.2 printf "\n=== Setting defaults ===\n"
1726 edhill 1.71 printf " Adding MODS directories: "
1727 edhill 1.1 for d in $MODS ; do
1728     if test ! -d $d ; then
1729 edhill 1.2 echo
1730     echo "Error: MODS directory \"$d\" not found!"
1731 edhill 1.1 exit 1
1732     else
1733 edhill 1.71 printf " $d"
1734 edhill 1.1 SOURCEDIRS="$SOURCEDIRS $d"
1735     INCLUDEDIRS="$INCLUDEDIRS $d"
1736     fi
1737     done
1738     echo
1739    
1740     if test "x${PLATFORM}" = x ; then
1741     PLATFORM=$p_PLATFORM
1742     fi
1743    
1744     if test "x${EXEDIR}" = x ; then
1745 edhill 1.112 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1746 edhill 1.87 if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1747 edhill 1.1 EXEDIR=../exe
1748     else
1749     EXEDIR=.
1750     fi
1751     fi
1752     if test ! -d ${EXEDIR} ; then
1753     echo "Error: the specified EXEDIR (\"$EXEDIR\") does not exist!"
1754     exit 1
1755     fi
1756    
1757     if test "x${TOOLSDIR}" = x ; then
1758     TOOLSDIR="$ROOTDIR/tools"
1759     fi
1760     if test ! -d ${TOOLSDIR} ; then
1761 cnh 1.65 echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1762 edhill 1.1 exit 1
1763     fi
1764 edhill 1.11 if test "x$S64" = x ; then
1765 edhill 1.104 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1766     RETVAL=$?
1767     if test "x${RETVAL}" = x0 ; then
1768     S64='$(TOOLSDIR)/set64bitConst.sh'
1769     else
1770     echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1771     RETVAL=$?
1772     if test "x${RETVAL}" = x0 ; then
1773     S64='$(TOOLSDIR)/set64bitConst.csh'
1774     else
1775     cat <<EOF
1776    
1777     ERROR: neither of the two default scripts:
1778    
1779     ${TOOLSDIR}/set64bitConst.sh
1780     ${TOOLSDIR}/set64bitConst.csh
1781    
1782     are working so please check paths or specify (with \$S64) a
1783     working version of this script.
1784    
1785     EOF
1786     exit 1
1787     fi
1788     fi
1789 edhill 1.11 fi
1790 adcroft 1.44 THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1791 edhill 1.1
1792     EXECUTABLE=${EXECUTABLE:-mitgcmuv}
1793    
1794     # We have a special set of source files in eesupp/src which are
1795     # generated from some template source files. We'll make them first so
1796     # they appear as regular source code
1797     if test -r $ROOTDIR"/eesupp/src/Makefile" ; then
1798     echo " Making source files in eesupp from templates"
1799 edhill 1.36 ( cd $ROOTDIR"/eesupp/src/" && $MAKE ) > make_eesupp.errors 2>&1
1800 edhill 1.1 RETVAL=$?
1801 edhill 1.2 if test "x${RETVAL}" = x0 ; then
1802 edhill 1.1 rm -f make_eesupp.errors
1803     else
1804     echo "Error: problem encountered while building source files in eesupp:"
1805 edhill 1.62 cat make_eesupp.errors 1>&2
1806 edhill 1.1 exit 1
1807 afe 1.58 fi
1808     fi
1809    
1810     #same for exch2
1811     if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then
1812     echo " Making source files in exch2 from templates"
1813     ( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1
1814     RETVAL=$?
1815     if test "x${RETVAL}" = x0 ; then
1816     rm -f make_exch2.errors
1817     else
1818 edhill 1.59 echo "Error: problem encountered while building source files in exch2:"
1819 edhill 1.62 cat make_exch2.errors 1>&2
1820 afe 1.58 exit 1
1821 edhill 1.1 fi
1822     fi
1823    
1824 edhill 1.2 printf "\n=== Determining package settings ===\n"
1825 edhill 1.1 if test "x${PDEPEND}" = x ; then
1826     tmp=$ROOTDIR"/pkg/pkg_depend"
1827     if test -r $tmp ; then
1828     PDEPEND=$tmp
1829     else
1830     echo "Warning: No package dependency information was specified."
1831     echo " Please check that ROOTDIR/pkg/pkg_depend exists."
1832     fi
1833     else
1834     if test ! -r ${PDEPEND} ; then
1835     echo "Error: can't read package dependency info from PDEPEND=\"$PDEPEND\""
1836     exit 1
1837     fi
1838     fi
1839     echo " getting package dependency info from $PDEPEND"
1840     # Strip the comments and then convert the dependency file into
1841     # two arrays: PNAME, DNAME
1842     cat $PDEPEND | sed -e 's/#.*$//g' \
1843 edhill 1.15 | $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \
1844 edhill 1.1 > ./.pd_tmp
1845     RETVAL=$?
1846     if test ! "x${RETVAL}" = x0 ; then
1847     echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\""
1848     exit 1
1849     fi
1850 edhill 1.34 . ./.pd_tmp
1851 edhill 1.1 rm -f ./.pd_tmp
1852    
1853 edhill 1.12 # Search for default packages. Note that a "$ROOTDIR/pkg/pkg_groups"
1854     # file should eventually be added so that, for convenience, one can
1855     # specify groups of packages using names like "ocean" and "atmosphere".
1856 edhill 1.41 echo " checking default package list: "
1857 edhill 1.1 if test "x${PDEFAULT}" = x ; then
1858 edhill 1.12 for i in "." $MODS ; do
1859     if test -r $i"/packages.conf" ; then
1860     PDEFAULT=$i"/packages.conf"
1861     break
1862     fi
1863     done
1864     fi
1865     if test "x${PDEFAULT}" = x ; then
1866 edhill 1.1 PDEFAULT="$ROOTDIR/pkg/pkg_default"
1867     fi
1868     if test "x${PDEFAULT}" = xNONE ; then
1869 edhill 1.41 echo " default packages file disabled"
1870 edhill 1.1 else
1871     if test ! -r $PDEFAULT ; then
1872     echo "Warning: can't read default packages from PDEFAULT=\"$PDEFAULT\""
1873     else
1874 edhill 1.41 echo " using PDEFAULT=\"$PDEFAULT\""
1875 edhill 1.1 # Strip the comments and add all the names
1876 edhill 1.15 def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1877 edhill 1.1 RETVAL=$?
1878     if test "x${RETVAL}" != x0 ; then
1879 edhill 1.71 printf "Error: can't parse default package list "
1880 edhill 1.1 echo "-- please check PDEFAULT=\"$PDEFAULT\""
1881     exit 1
1882     fi
1883     for i in $def ; do
1884     PACKAGES="$PACKAGES $i"
1885     done
1886 edhill 1.12 echo " before group expansion packages are: $PACKAGES"
1887 edhill 1.87 RET=1
1888     while test $RET = 1 ; do expand_pkg_groups; RET=$?; done
1889 edhill 1.12 echo " after group expansion packages are: $PACKAGES"
1890 edhill 1.1 fi
1891     fi
1892    
1893     echo " applying DISABLE settings"
1894 adcroft 1.74 for i in $PACKAGES ; do
1895     echo $i >> ./.tmp_pack
1896     done
1897     for i in `grep "-" ./.tmp_pack` ; do
1898     j=`echo $i | sed 's/[-]//'`
1899     DISABLE="$DISABLE $j"
1900     done
1901 edhill 1.1 pack=
1902     for p in $PACKAGES ; do
1903     addit="t"
1904     for d in $DISABLE ; do
1905     if test "x$p" = "x$d" ; then
1906     addit="f"
1907     fi
1908     done
1909     if test "x$addit" = xt ; then
1910     pack="$pack $p"
1911     fi
1912     done
1913     PACKAGES="$pack"
1914     echo " applying ENABLE settings"
1915 edhill 1.12 echo "" > ./.tmp_pack
1916 edhill 1.1 PACKAGES="$PACKAGES $ENABLE"
1917 adcroft 1.74 # Test if each explicitly referenced package exists
1918 edhill 1.1 for i in $PACKAGES ; do
1919 adcroft 1.74 j=`echo $i | sed 's/[-+]//'`
1920     if test ! -d "$ROOTDIR/pkg/$j" ; then
1921 edhill 1.1 echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\""
1922 adcroft 1.74 exit 1
1923 edhill 1.1 fi
1924     echo $i >> ./.tmp_pack
1925     done
1926     PACKAGES=
1927 adcroft 1.74 for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do
1928 edhill 1.1 PACKAGES="$PACKAGES $i"
1929     done
1930 adcroft 1.74 rm -f ./.tmp_pack
1931 edhill 1.1 echo " packages are: $PACKAGES"
1932    
1933 edhill 1.100 # Check availability of NetCDF and then either build the MNC template
1934     # files or delete mnc from the list of available packages.
1935     echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1936     RETVAL=$?
1937     if test "x$RETVAL" = x0 ; then
1938     if test "x$HAVE_NETCDF" != xt ; then
1939     cat <<EOF
1940    
1941     *********************************************************************
1942     WARNING: the "mnc" package was enabled but tests failed to compile
1943     NetCDF applications. Please check that:
1944    
1945     1) NetCDF is correctly installed for this compiler and
1946     2) the LIBS variable (within the "optfile") specifies the correct
1947     NetCDF library to link against.
1948    
1949     Due to this failure, the "mnc" package is now DISABLED.
1950     *********************************************************************
1951    
1952     EOF
1953     PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
1954     DISABLE="$DISABLE mnc"
1955     else
1956 edhill 1.110 ( cd $ROOTDIR"/pkg/mnc" && $MAKE testclean && $MAKE templates ) > make_mnc.errors 2>&1
1957 edhill 1.100 RETVAL=$?
1958     if test "x${RETVAL}" = x0 ; then
1959     rm -f make_mnc.errors
1960     else
1961     echo "Error: problem encountered while building source files in pkg/mnc:"
1962     cat make_mnc.errors 1>&2
1963     exit 1
1964     fi
1965     fi
1966     fi
1967    
1968 edhill 1.1 echo " applying package dependency rules"
1969     ck=
1970     while test "x$ck" != xtt ; do
1971     i=0
1972 edhill 1.2 # rtot=${#PNAME[@]}
1973     rtot=$nname
1974 edhill 1.1 while test $i -lt $rtot ; do
1975    
1976     # Is $pname in the current $PACKAGES list?
1977 edhill 1.2 # pname=${PNAME[$i]}
1978     tmp="pname=\"\$PNAME_$i\""
1979     eval $tmp
1980 edhill 1.1 pin="f"
1981     for p in $PACKAGES ; do
1982     if test "x$p" = "x$pname" ; then
1983     pin="t"
1984     fi
1985     done
1986    
1987     # Is the DNAME entry a (+) or (-) rule ?
1988 edhill 1.2 tmp="dname=\"\$DNAME_$i\""
1989     eval $tmp
1990 edhill 1.1 plus="-"
1991 edhill 1.2 echo $dname | grep '^+' > /dev/null 2>&1
1992 edhill 1.1 RETVAL=$?
1993     if test "x$RETVAL" = x0 ; then
1994     plus="+"
1995     fi
1996    
1997     # Is $dname in the current $PACKAGES list?
1998 edhill 1.2 dname=`echo $dname | sed -e 's/^[+-]//'`
1999 edhill 1.1 din="f"
2000     for p in $PACKAGES ; do
2001     if test "x$p" = "x$dname" ; then
2002     din="t"
2003     fi
2004     done
2005    
2006     # Do we need to add $dname according to the dependency rules?
2007     if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then
2008     in_dis="f"
2009     for dis in $DISABLE ; do
2010     if test "x$dis" = "x$dname" ; then
2011     in_dis="t"
2012     fi
2013     done
2014     if test "x$in_dis" = xt ; then
2015     echo "Error: can't satisfy package dependencies:"
2016     echo " \"$dname\" is required by the dependency rules"
2017     echo " but is disallowed by the DISABLE settings"
2018     exit 1
2019     else
2020     PACKAGES="$PACKAGES $dname"
2021     ck=
2022     fi
2023     fi
2024    
2025     # Do we need to get rid of $dname according to the dependency rules?
2026     if test "x$pin" = xt -a "x$plus" = "x-" -a "x$din" = xt; then
2027     echo "Error: can't satisfy package dependencies:"
2028     echo " \"$pname\" was requested but is disallowed by"
2029     echo " the dependency rules for \"$dname\""
2030     exit 1
2031     fi
2032 edhill 1.87 i=`echo "$i + 1" | bc -l`
2033     #i=$(( $i + 1 ))
2034 edhill 1.1 done
2035     ck=$ck"t"
2036     done
2037     echo " packages are: $PACKAGES"
2038     for i in $PACKAGES ; do
2039     adr="$ROOTDIR/pkg/$i"
2040     if test -d $adr ; then
2041     SOURCEDIRS="$SOURCEDIRS $adr"
2042     INCLUDEDIRS="$INCLUDEDIRS $adr"
2043 edhill 1.14 if test "x$i" = xautodiff ; then
2044     AUTODIFF_PKG_USED=t
2045     fi
2046 edhill 1.1 else
2047     echo "Error: the directory \"$adr\" for package $i doesn't exist"
2048     exit 1
2049     fi
2050     done
2051    
2052 edhill 1.12 # Create a list of #define and #undef to enable/disable packages
2053     PACKAGES_DOT_H=PACKAGES_CONFIG.h
2054 edhill 1.1 # The following UGLY HACK sets multiple "#undef"s and it needs to go
2055     # away. On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h
2056     # file would eventually be split up so that all package-related #define
2057     # statements could be separated and handled only by genmake.
2058     names=`ls -1 "$ROOTDIR/pkg"`
2059     all_pack=
2060 adcroft 1.44 DISABLED_PACKAGES=
2061 edhill 1.1 for n in $names ; do
2062     if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then
2063     has_pack="f"
2064     for pack in $PACKAGES ; do
2065     if test "x$pack" = "x$n" ; then
2066     has_pack="t"
2067     break
2068     fi
2069     done
2070     if test "x$has_pack" = xf ; then
2071 edhill 1.116 undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2072 adcroft 1.44 DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
2073 edhill 1.1 fi
2074     fi
2075     done
2076 adcroft 1.44 ENABLED_PACKAGES=
2077 edhill 1.1 for i in $PACKAGES ; do
2078 edhill 1.116 def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2079 adcroft 1.44 ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
2080 edhill 1.12 #eh3 DEFINES="$DEFINES -D$def"
2081 edhill 1.1
2082     #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2083     case $i in
2084     aim_v23)
2085 adcroft 1.46 ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
2086 jmc 1.55 echo "Warning: ALLOW_AIM is set to enable aim_v23."
2087 edhill 1.1 ;;
2088     esac
2089     #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2090    
2091     done
2092    
2093     echo " Adding STANDARDDIRS"
2094     BUILDDIR=${BUILDDIR:-.}
2095 edhill 1.57 if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
2096 edhill 1.12 STANDARDDIRS="eesupp model"
2097     fi
2098 edhill 1.57 if test "x$STANDARDDIRS" != x ; then
2099     for d in $STANDARDDIRS ; do
2100     adr="$ROOTDIR/$d/src"
2101     if test ! -d $adr ; then
2102     echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2103     echo " is correct and that you correctly specified the STANDARDDIRS option"
2104     exit 1
2105     else
2106     SOURCEDIRS="$SOURCEDIRS $adr"
2107     fi
2108     adr="$ROOTDIR/$d/inc"
2109     if test ! -d $adr ; then
2110     echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2111     echo " is correct and that you correctly specified the STANDARDDIRS option"
2112     exit 1
2113     else
2114     INCLUDEDIRS="$INCLUDEDIRS $adr"
2115     fi
2116     done
2117     fi
2118 edhill 1.1
2119 adcroft 1.52 echo " Searching for *OPTIONS.h files in order to warn about the presence"
2120     echo " of \"#define \"-type statements that are no longer allowed:"
2121 edhill 1.12 CPP_OPTIONS=
2122 adcroft 1.52 CPP_EEOPTIONS=
2123 edhill 1.12 spaths=". $INCLUDEDIRS"
2124 adcroft 1.52 names=`ls -1 "$ROOTDIR/pkg"`
2125 edhill 1.12 for i in $spaths ; do
2126     try="$i/CPP_OPTIONS.h"
2127 edhill 1.54 if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
2128 edhill 1.12 echo " found CPP_OPTIONS=\"$try\""
2129     CPP_OPTIONS="$try"
2130 adcroft 1.52 # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
2131     for n in $names ; do
2132     test_for_package_in_cpp_options $CPP_OPTIONS $n
2133     done
2134     fi
2135     try="$i/CPP_EEOPTIONS.h"
2136 edhill 1.54 if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
2137 adcroft 1.52 echo " found CPP_EEOPTIONS=\"$try\""
2138     # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
2139     #**** not yet enabled ****
2140     # test_for_mpi_in_cpp_eeoptions $try
2141     #**** not yet enabled ****
2142     CPP_EEOPTIONS="$try"
2143 edhill 1.12 fi
2144     done
2145     if test "x$CPP_OPTIONS" = x ; then
2146     echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"
2147     exit 1
2148     fi
2149 edhill 1.1
2150 edhill 1.14 # Here, we build the list of files to be "run through" the adjoint
2151     # compiler.
2152     if test -f ./ad_files ; then
2153     rm -f ./ad_files
2154     fi
2155     echo " Creating the list of files for the adjoint compiler."
2156     for i in $SOURCEDIRS ; do
2157     list_files=`( cd $i && ls -1 *.list 2>/dev/null )`
2158     for j in $list_files ; do
2159     cat $i/$j >> ad_files
2160     done
2161     done
2162 edhill 1.121 if test ! "x"$FS = "x.f" ; then
2163 edhill 1.122 cat ad_files | sed -e "s/\.f/.$FS/g" > ad_files_f
2164 edhill 1.121 mv -f ad_files_f ad_files
2165     fi
2166 edhill 1.14
2167 edhill 1.2 echo
2168     echo "=== Creating the Makefile ==="
2169 edhill 1.1 echo " setting INCLUDES"
2170     for i in $INCLUDEDIRS ; do
2171 edhill 1.87 if test ! -d $i ; then
2172 edhill 1.1 echo "Warning: can't find INCLUDEDIRS=\"$i\""
2173     fi
2174     done
2175    
2176 ce107 1.139 if test ! "x$DIVA" = x ; then
2177 ce107 1.140 echo " Creating the pseudo-MPI include directory"
2178 ce107 1.139 INCLUDES="-I./mpi_headers $INCLUDES"
2179     rm -rf ./mpi_headers
2180     mkdir -p ./mpi_headers
2181    
2182     if test "x$MPIINCLUDEDIR" = x ; then
2183     if test "x$MPIHOME" = x ; then
2184     MPIHOME='/usr'
2185     fi
2186     MPIINCLUDEDIR='$MPIHOME/include'
2187     fi
2188    
2189     if test -r $MPIINCLUDEDIR/mpif.h ; then
2190     for i in $MPI_HEADER_FILES; do
2191     cp -p $MPIINCLUDEDIR/$i ./mpi_headers
2192     done
2193    
2194     perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h
2195     else
2196     echo " We cannot create a copy of mpif.h!"
2197     exit -1
2198     fi
2199     fi
2200    
2201 edhill 1.1 echo " Determining the list of source and include files"
2202     rm -rf .links.tmp
2203     mkdir .links.tmp
2204 edhill 1.142 touch .links.tmp/foo
2205     if test ! -r ".links.tmp/foo" ; then
2206     echo
2207     echo "ERROR : something is wrong with your directory permissions or"
2208     echo " your user file-creation mask (\"umask\") since creating a"
2209     echo " sub-dir, touch-ing a file within it, and then reading it is"
2210     echo " not working. Please try setting your umask to something"
2211     echo " sane such as:"
2212     echo
2213     echo " umask 0002"
2214     echo
2215     echo " and please verify that you have the proper permissions for"
2216     echo " creating sub-directories and then reading files created"
2217     echo " within them."
2218     echo
2219     exit 1
2220     fi
2221     rm -f .links.tmp/foo
2222 edhill 1.1 echo "# This section creates symbolic links" > srclinks.tmp
2223     echo "" >> srclinks.tmp
2224 edhill 1.71 printf 'SRCFILES = ' > srclist.inc
2225     printf 'CSRCFILES = ' > csrclist.inc
2226     printf 'F90SRCFILES = ' > f90srclist.inc
2227     printf 'HEADERFILES = ' > hlist.inc
2228     printf 'AD_FLOW_FILES = ' > ad_flow_files.inc
2229 adcroft 1.9 alldirs="$SOURCEDIRS $INCLUDEDIRS ."
2230 edhill 1.1 for d in $alldirs ; do
2231     deplist=
2232 edhill 1.14 sfiles=`( cd $d; echo *.[h,c,F] *.flow )`
2233 cnh 1.3 sfiles=`( echo $sfiles; cd $d; echo *.F90 )`
2234 edhill 1.1 for sf in $sfiles ; do
2235     if test ! -r ".links.tmp/$sf" ; then
2236     if test -f "$d/$sf" ; then
2237 edhill 1.131 ignore_f=f
2238 adcroft 1.44 case $d/$sf in
2239     ./$PACKAGES_DOT_H)
2240 edhill 1.141 ignore_f=t
2241 adcroft 1.44 ;;
2242     ./AD_CONFIG.h)
2243 edhill 1.141 ignore_f=t
2244 adcroft 1.44 ;;
2245     ./FC_NAMEMANGLE.h)
2246 edhill 1.141 ignore_f=t
2247 adcroft 1.44 ;;
2248 edhill 1.98 ./BUILD_INFO.h)
2249 edhill 1.141 ignore_f=t
2250     ;;
2251     ./EMBEDDED_FILES.h)
2252     ignore_f=t
2253 edhill 1.98 ;;
2254 adcroft 1.44 *)
2255 edhill 1.131 # For the local directory *ONLY*,
2256     # ignore all soft-links
2257     if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then
2258     ignore_f=t
2259     else
2260     touch .links.tmp/$sf
2261     deplist="$deplist $sf"
2262     fi
2263 adcroft 1.44 ;;
2264     esac
2265 edhill 1.131 if test "x$ignore_f" = xf ; then
2266     extn=`echo $sf | $AWK -F. '{print $NF}'`
2267     case $extn in
2268     F)
2269     echo " \\" >> srclist.inc
2270     printf " $sf" >> srclist.inc
2271     ;;
2272     F90)
2273     echo " \\" >> f90srclist.inc
2274     printf " $sf" >> f90srclist.inc
2275     ;;
2276     c)
2277     echo " \\" >> csrclist.inc
2278     printf " $sf" >> csrclist.inc
2279     ;;
2280     h)
2281     echo " \\" >> hlist.inc
2282     printf " $sf" >> hlist.inc
2283     ;;
2284     flow)
2285     echo " \\" >> ad_flow_files.inc
2286     printf " $sf" >> ad_flow_files.inc
2287     ;;
2288     esac
2289     fi
2290 edhill 1.1 fi
2291     fi
2292     done
2293     if test "x$deplist" != x ; then
2294 edhill 1.2 echo "" >> srclinks.tmp
2295     echo "# These files are linked from $d" >> srclinks.tmp
2296 edhill 1.1 echo "$deplist :" >> srclinks.tmp
2297 edhill 1.2 printf "\t\$(LN) %s/\$@ \$@\n" $d >> srclinks.tmp
2298 edhill 1.1 fi
2299     done
2300     rm -rf .links.tmp
2301     echo "" >> srclist.inc
2302     echo "" >> csrclist.inc
2303 cnh 1.3 echo "" >> f90srclist.inc
2304 edhill 1.1 echo "" >> hlist.inc
2305 edhill 1.14 echo "" >> ad_flow_files.inc
2306 edhill 1.1
2307 edhill 1.88 if test -f $MAKEFILE ; then
2308 edhill 1.1 mv -f $MAKEFILE "$MAKEFILE.bak"
2309     fi
2310     echo " Writing makefile: $MAKEFILE"
2311     echo "# Multithreaded + multi-processing makefile for:" > $MAKEFILE
2312     echo "# $MACHINE" >> $MAKEFILE
2313     echo "# This makefile was generated automatically on" >> $MAKEFILE
2314     echo "# $THISDATE" >> $MAKEFILE
2315     echo "# by the command:" >> $MAKEFILE
2316 edhill 1.73 echo "# $0 $G2ARGS" >> $MAKEFILE
2317 edhill 1.1 echo "# executed by:" >> $MAKEFILE
2318 edhill 1.97 echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
2319 edhill 1.21
2320     EXE_AD=$EXECUTABLE"_ad"
2321     EXE_FTL=$EXECUTABLE"_ftl"
2322     EXE_SVD=$EXECUTABLE"_svd"
2323    
2324 edhill 1.1 cat >>$MAKEFILE <<EOF
2325 edhill 1.53 #
2326     # OPTFILE="$OPTFILE"
2327 edhill 1.1 #
2328     # BUILDDIR : Directory where object files are written
2329     # SOURCEDIRS : Directories containing the source (.F) files
2330     # INCLUDEDIRS : Directories containing the header-source (.h) files
2331     # EXEDIR : Directory where executable that is generated is written
2332     # EXECUTABLE : Full path of executable binary
2333     #
2334     # CPP : C-preprocessor command
2335     # INCLUDES : Directories searched for header files
2336     # DEFINES : Macro definitions for CPP
2337     # MAKEDEPEND : Dependency generator
2338     # KPP : Special preprocessor command (specific to platform)
2339     # KFLAGS : Flags for KPP
2340     # FC : Fortran compiler command
2341     # FFLAGS : Configuration/debugging options for FC
2342     # FOPTIM : Optimization options for FC
2343     # LINK : Command for link editor program
2344     # LIBS : Library flags /or/ additional optimization/debugging flags
2345    
2346     ROOTDIR = ${ROOTDIR}
2347     BUILDDIR = ${BUILDDIR}
2348     SOURCEDIRS = ${SOURCEDIRS}
2349     INCLUDEDIRS = ${INCLUDEDIRS}
2350     EXEDIR = ${EXEDIR}
2351     EXECUTABLE = \$(EXEDIR)/${EXECUTABLE}
2352     TOOLSDIR = ${TOOLSDIR}
2353    
2354 edhill 1.14 #eh3 new defines for the adjoint work
2355     AUTODIFF = ${ROOTDIR}/pkg/autodiff
2356 edhill 1.21 EXE_AD = ${EXE_AD}
2357     EXE_FTL = ${EXE_FTL}
2358     EXE_SVD = ${EXE_SVD}
2359 edhill 1.14
2360 adcroft 1.44 ENABLED_PACKAGES = ${ENABLED_PACKAGES}
2361     DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2362    
2363 adcroft 1.52 # These files are created by Makefile
2364 edhill 1.97 SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
2365 edhill 1.141 EOF
2366 adcroft 1.52
2367 edhill 1.141 if test "x$EMBED_SRC" = xt ; then
2368     echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE
2369     else
2370     echo "EMBEDDED_FILES = " >>$MAKEFILE
2371     fi
2372 edhill 1.1
2373 edhill 1.141 # Note: figure out some way to add Hyades JAM libraries here
2374 edhill 1.1 cat >>$MAKEFILE <<EOF
2375     # Unix ln (link)
2376     LN = ${LN}
2377     # C preprocessor
2378     CPP = cat \$< | ${S64} | ${CPP}
2379     # Dependency generator
2380     MAKEDEPEND = ${MAKEDEPEND}
2381     # Special preprocessor (KAP on DECs, FPP on Crays)
2382     KPP = ${KPP}
2383     # Fortran compiler
2384 edhill 1.94 FC = ${FC}
2385 cnh 1.3 # Fortran compiler
2386     F90C = ${F90C}
2387 edhill 1.92 # C compiler
2388     CC = ${CC}
2389 edhill 1.1 # Link editor
2390 edhill 1.70 LINK = ${LINK} ${LDADD}
2391 edhill 1.1
2392     # Defines for CPP
2393     DEFINES = ${DEFINES}
2394     # Includes for CPP
2395     INCLUDES = ${INCLUDES}
2396     # Flags for KPP
2397     KFLAGS1 = ${KFLAGS1}
2398     KFLAGS2 = ${KFLAGS2}
2399     # Optim./debug for FC
2400     FFLAGS = ${FFLAGS}
2401     FOPTIM = ${FOPTIM}
2402 cnh 1.3 # Optim./debug for FC
2403     F90FLAGS = ${F90FLAGS}
2404     F90OPTIM = ${F90OPTIM}
2405 edhill 1.1 # Flags for CC
2406     CFLAGS = ${CFLAGS}
2407     # Files that should not be optimized
2408     NOOPTFILES = ${NOOPTFILES}
2409     NOOPTFLAGS = ${NOOPTFLAGS}
2410     # Flags and libraries needed for linking
2411 edhill 1.107 LIBS = ${LIBS}
2412 cnh 1.3 # Name of the Mekfile
2413     MAKEFILE=${MAKEFILE}
2414 edhill 1.1
2415     EOF
2416    
2417 edhill 1.14 cat srclist.inc >> $MAKEFILE
2418     cat csrclist.inc >> $MAKEFILE
2419     cat f90srclist.inc >> $MAKEFILE
2420     cat hlist.inc >> $MAKEFILE
2421     cat ad_flow_files.inc >> $MAKEFILE
2422 edhill 1.75 echo >> $MAKEFILE
2423 edhill 1.76 echo 'F77FILES = $(SRCFILES:.F=.'$FS')' >> $MAKEFILE
2424 heimbach 1.127 echo 'F90FILES = $(F90SRCFILES:.F90=.'$FS90')' >> $MAKEFILE
2425 edhill 1.76 echo 'OBJFILES = $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE
2426 edhill 1.75 echo >> $MAKEFILE
2427     echo '.SUFFIXES:' >> $MAKEFILE
2428 adcroft 1.83 echo '.SUFFIXES: .o .'$FS' .p .F .c .'$FS90' .F90' >> $MAKEFILE
2429 cnh 1.3 rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc
2430 edhill 1.14 rm -f ad_flow_files.inc
2431 edhill 1.1
2432     cat >>$MAKEFILE <<EOF
2433    
2434     all: \$(EXECUTABLE)
2435 edhill 1.141 \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES) \$(EMBEDDED_FILES)
2436 adcroft 1.44 @echo Creating \$@ ...
2437 edhill 1.1 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2438     depend:
2439     @make links
2440 edhill 1.76 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(SRCFILES)
2441 adcroft 1.44 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2442 edhill 1.72 -rm -f makedepend.out
2443 edhill 1.1
2444 cnh 1.132 lib: libmitgcmuv.a
2445    
2446     libmitgcmuv.a: \$(OBJFILES)
2447     ar rcv libmitgcmuv.a \$(OBJFILES)
2448    
2449 adcroft 1.52 links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
2450 edhill 1.1
2451 cnh 1.3 small_f: \$(F77FILES) \$(F90FILES)
2452 edhill 1.1
2453     output.txt: \$(EXECUTABLE)
2454     @printf 'running ... '
2455     @\$(EXECUTABLE) > \$@
2456    
2457     clean:
2458 edhill 1.76 -rm -rf *.o *.$FS *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
2459 edhill 1.1 Clean:
2460     @make clean
2461     @make cleanlinks
2462 adcroft 1.52 -rm -f \$(SPECIAL_FILES)
2463 jmc 1.145 -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak
2464 edhill 1.1 CLEAN:
2465     @make Clean
2466     -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2467     -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2468     -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2469 edhill 1.144 -rm -f \$(EXECUTABLE) *.txt STD* *diagnostics.log datetime
2470     -rm -rf mnc_test_*
2471 edhill 1.1
2472 edhill 1.18 #eh3 Makefile: makefile
2473 edhill 1.1 makefile:
2474 edhill 1.73 $THIS_SCRIPT $G2ARGS
2475 edhill 1.1 cleanlinks:
2476     -find . -type l -exec rm {} \;
2477    
2478 edhill 1.97 # Special targets (SPECIAL_FILES) which are create by make
2479 adcroft 1.44 ${PACKAGES_DOT_H}:
2480     @echo Creating \$@ ...
2481 edhill 1.71 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
2482 adcroft 1.44 AD_CONFIG.h:
2483     @echo Creating \$@ ...
2484 edhill 1.71 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
2485 adcroft 1.52 FC_NAMEMANGLE.h:
2486     @echo Creating \$@ ...
2487     echo "$FC_NAMEMANGLE" > \$@
2488 adcroft 1.44
2489 edhill 1.97 BUILD_INFO.h:
2490     @echo Creating \$@ ...
2491     EOF
2492    
2493     test ! "x$THISVER" = x && echo " -echo \"#define THISVER '$THISVER'\" > \$@" >> $MAKEFILE
2494     test ! "x$THISUSER" = x && echo " -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2495     test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2496     test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2497    
2498 edhill 1.141 if test "x$EMBED_SRC" = xt ; then
2499     cat >>$MAKEFILE <<EOF
2500    
2501     decode_files.o : EMBEDDED_FILES.h
2502    
2503     ## \$(F77FILES)
2504     all_fF.tar.gz : \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2505     @echo Creating \$@ ...
2506     -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2507     -rm -f all_fF.tar.gz
2508     -gzip all_fF.tar
2509    
2510     EMBEDDED_FILES.h : all_fF.tar.gz
2511     @echo Creating \$@ ...
2512     -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
2513    
2514     EOF
2515     fi
2516    
2517 edhill 1.97 cat >>$MAKEFILE <<EOF
2518    
2519 edhill 1.76 # The normal chain of rules is ( .F - .$FS - .o )
2520    
2521 edhill 1.101 ## This nullifies any default implicit rules concerning these two file types:
2522     ## %.o : %.F
2523 edhill 1.76
2524     .F.$FS:
2525 edhill 1.1 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2526 edhill 1.76 .$FS.o:
2527 edhill 1.1 \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2528 edhill 1.76 .F90.$FS90:
2529 cnh 1.3 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2530 edhill 1.76 .$FS90.o:
2531 cnh 1.3 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2532 edhill 1.1 .c.o:
2533 ce107 1.139 \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
2534 edhill 1.1
2535 edhill 1.76 # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2536     .F.p:
2537 edhill 1.1 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2538 edhill 1.76 .p.$FS:
2539 edhill 1.1 \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
2540 edhill 1.14
2541     #=========================================
2542     #=== Automatic Differentiation Rules ===
2543    
2544     TAMC = ${TAMC}
2545     TAF = ${TAF}
2546    
2547 edhill 1.17 TAF_EXTRA = ${TAF_EXTRA}
2548     TAMC_EXTRA = ${TAMC_EXTRA}
2549    
2550 edhill 1.14 EOF
2551    
2552     ad_vars="AD_TAMC_FLAGS AD_TAF_FLAGS"
2553     ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF_FLAGS"
2554     ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
2555     for i in $ad_vars ; do
2556     name=$i
2557     t1="t2=\$"`echo $i`
2558     eval $t1
2559     printf "%-20s = " $name >> $MAKEFILE
2560     echo $t2 >> $MAKEFILE
2561     done
2562    
2563     echo " Add the source list for AD code generation"
2564     echo >> $MAKEFILE
2565 edhill 1.71 printf "AD_FILES = " >> $MAKEFILE
2566 edhill 1.14 AD_FILES=`cat ad_files`
2567     for i in $AD_FILES ; do
2568     echo " \\" >> $MAKEFILE
2569 edhill 1.71 printf " $i" >> $MAKEFILE
2570 edhill 1.14 done
2571     echo >> $MAKEFILE
2572 edhill 1.21 rm -f ad_files
2573 edhill 1.14
2574     cat >>$MAKEFILE <<EOF
2575    
2576 edhill 1.16 # ... AD ...
2577 edhill 1.23 adall: ad_taf
2578 edhill 1.121 adtaf: ad_taf_output.$FS
2579     adtamc: ad_tamc_output.$FS
2580 edhill 1.21
2581 edhill 1.121 ad_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2582 edhill 1.71 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2583 edhill 1.23 cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2584 adcroft 1.44 -rm -f ad_config.template
2585 edhill 1.22 @make \$(F77FILES)
2586     @make \$(AD_FLOW_FILES)
2587 edhill 1.121 cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.$FS
2588 edhill 1.22
2589 edhill 1.121 ad_taf_output.$FS: ad_input_code.$FS
2590     \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2591     cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2592 heimbach 1.37
2593     adtafonly:
2594 edhill 1.121 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2595     cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2596 edhill 1.14
2597     ad_taf: ad_taf_output.o \$(OBJFILES)
2598 edhill 1.21 \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2599 edhill 1.14
2600 edhill 1.121 ad_tamc_output.$FS: ad_input_code.$FS
2601     \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
2602     cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
2603 edhill 1.14
2604     ad_tamc: ad_tamc_output.o \$(OBJFILES)
2605 edhill 1.21 \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
2606 edhill 1.14
2607 heimbach 1.105 adonlyfwd:
2608 edhill 1.106 patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
2609 heimbach 1.105
2610     adtrick:
2611 edhill 1.106 patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
2612 edhill 1.14
2613 edhill 1.19 # ... FTL ...
2614 edhill 1.23 ftlall: ftl_taf
2615 edhill 1.121 ftltaf: ftl_taf_output.$FS
2616     ftltamc: ftl_tamc_output.$FS
2617 edhill 1.21
2618 edhill 1.121 ftl_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2619 edhill 1.71 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2620 edhill 1.23 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2621 adcroft 1.44 -rm -f ftl_config.template
2622 edhill 1.23 @make \$(F77FILES)
2623 edhill 1.22 @make \$(AD_FLOW_FILES)
2624 edhill 1.121 cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
2625 edhill 1.22
2626 edhill 1.121 ftl_taf_output.$FS: ftl_input_code.$FS
2627     \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2628     cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2629 edhill 1.14
2630 heimbach 1.40 ftltafonly:
2631 edhill 1.121 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2632     cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2633 heimbach 1.40
2634 edhill 1.19 ftl_taf: ftl_taf_output.o \$(OBJFILES)
2635 edhill 1.21 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
2636 edhill 1.14
2637 edhill 1.121 ftl_tamc_output.$FS: ftl_input_code.$FS
2638     \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
2639     cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
2640 edhill 1.16
2641 edhill 1.19 ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
2642 edhill 1.21 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
2643 edhill 1.16
2644    
2645     # ... SVD ...
2646 edhill 1.121 svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
2647 heimbach 1.109 @echo "--->>> Only ran TAF to generate SVD code! <<<---"
2648     @echo "--->>> Do make svdall afterwards to compile. <<<---"
2649     svdall: svd_touch svd_taf
2650 edhill 1.16
2651 heimbach 1.109 svd_taf: \$(OBJFILES)
2652 heimbach 1.40 \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
2653 edhill 1.14
2654 heimbach 1.109 @echo "--->>> Only COMPILE svd code! <<<---"
2655     @echo "--->>> Assumes you previously <<<---"
2656     @echo "--->>> did make svdtaf <<<---"
2657    
2658     svd_touch:
2659     @echo "--->>> Only COMPILE svd code! <<<---"
2660     @echo "--->>> Assumes you previously <<<---"
2661     @echo "--->>> did make svdtaf <<<---"
2662 edhill 1.121 touch ad_taf_output.$FS ftl_taf_output.$FS
2663     \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
2664     \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
2665 heimbach 1.109 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2666     cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2667     -rm -f ftl_config.template
2668 edhill 1.14
2669     #=========================================
2670 edhill 1.1
2671     EOF
2672 edhill 1.7
2673     if test "x$EXEHOOK" != x ; then
2674     printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE
2675     fi
2676 edhill 1.1
2677     echo " Making list of \"exceptions\" that need \".p\" files"
2678     for i in $KPPFILES ; do
2679     base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
2680     RETVAL=$?
2681     if test "x$RETVAL" != x0 ; then
2682     echo "Error: unable to add file \"$i\" to the exceptions list"
2683     fi
2684 edhill 1.76 echo "$base.$FS: $base.p" >> $MAKEFILE
2685 edhill 1.1 done
2686    
2687     echo " Making list of NOOPTFILES"
2688     for i in $NOOPTFILES ; do
2689     base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
2690     RETVAL=$?
2691     if test "x$RETVAL" != x0 ; then
2692     echo "Error: unable to add file \"$i\" to the exceptions list"
2693     fi
2694 edhill 1.76 echo "$base.o: $base.$FS" >> $MAKEFILE
2695 edhill 1.2 printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE
2696 edhill 1.1 done
2697    
2698     echo " Add rules for links"
2699     cat srclinks.tmp >> $MAKEFILE
2700     rm -f srclinks.tmp
2701    
2702     echo " Adding makedepend marker"
2703 edhill 1.2 printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE
2704 edhill 1.1
2705 edhill 1.2 printf "\n=== Done ===\n"
2706 adcroft 1.47
2707     # Create special header files
2708 edhill 1.71 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
2709 adcroft 1.47 if test ! -f $PACKAGES_DOT_H ; then
2710     mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
2711     else
2712 edhill 1.61 cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
2713 adcroft 1.47 RETVAL=$?
2714     if test "x$RETVAL" = x0 ; then
2715     rm -f $PACKAGES_DOT_H".tmp"
2716     else
2717     mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"
2718     mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
2719     fi
2720     fi
2721     if test ! -f AD_CONFIG.h ; then
2722 edhill 1.71 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
2723 adcroft 1.47 fi
2724 edhill 1.5
2725    
2726     # Write the "state" for future records
2727     if test "x$DUMPSTATE" != xf ; then
2728 edhill 1.71 printf "" > genmake_state
2729 edhill 1.5 for i in $gm_state ; do
2730     t1="t2=\$$i"
2731     eval $t1
2732 edhill 1.12 echo "$i='$t2'" >> genmake_state
2733 edhill 1.5 done
2734     fi

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