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Revision 1.144 - (hide annotations) (download)
Sat Mar 11 02:53:48 2006 UTC (13 years, 8 months ago) by edhill
Branch: MAIN
CVS Tags: checkpoint58c_post, checkpoint58b_post
Changes since 1.143: +4 -3 lines
do a better job of cleanup with "make CLEAN"

1 edhill 1.86 #! /usr/bin/env bash
2 edhill 1.1 #
3 edhill 1.144 # $Header: /u/gcmpack/MITgcm/tools/genmake2,v 1.143 2006/02/14 16:21:09 edhill Exp $
4 edhill 1.1 #
5     # Makefile generator for MITgcm UV codes
6     # created by cnh 03/98
7     # adapted by aja 06/98
8     # modified by aja 01/00
9     # rewritten in bash by eh3 08/03
10    
11 edhill 1.12 # Search for particular CPP #cmds associated with packages
12     # usage: test_for_package_in_cpp_options CPP_file package_name
13     test_for_package_in_cpp_options() {
14     cpp_options=$1
15     pkg=$2
16 adcroft 1.52 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg" || exit 99
17     test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg" || exit 99
18     test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg" || exit 99
19     test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg" || exit 99
20     }
21    
22     # Search for particular CPP #cmds associated with MPI
23     # usage: test_for_mpi_in_cpp_eeoptions CPP_file
24     test_for_mpi_in_cpp_eeoptions() {
25     cpp_options=$1
26     test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI" || exit 99
27     test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI" || exit 99
28     test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI" || exit 99
29     test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI" || exit 99
30     }
31    
32     # Search for particular string in a file. Return 1 if detected, 0 if not
33     # usage: test_for_string_in_file file string
34     test_for_string_in_file() {
35     file=$1
36     strng=$2
37     grep -i "$strng" $file > /dev/null 2>&1
38 edhill 1.12 RETVAL=$?
39     if test "x${RETVAL}" = x0 ; then
40 edhill 1.71 printf "Error: In $file there is an illegal line: "
41 adcroft 1.52 grep -i "$strng" $file
42     return 1
43 edhill 1.12 fi
44 adcroft 1.52 return 0
45 edhill 1.12 }
46    
47     # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to
48     # the package list.
49     expand_pkg_groups() {
50     new_packages=
51     PKG_GROUPS=$ROOTDIR"/pkg/pkg_groups"
52     if test -r $PKG_GROUPS ; then
53     cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp
54 edhill 1.15 cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp
55 edhill 1.12 matched=0
56     for i in $PACKAGES ; do
57     line=`grep "^ *$i" ./p2.tmp`
58     RETVAL=$?
59     if test "x$RETVAL" = x0 ; then
60     matched=1
61 edhill 1.15 replace=`echo $line | $AWK '{ $1=""; $2=""; print $0 }'`
62 edhill 1.12 echo " replacing \"$i\" with: $replace"
63     new_packages="$new_packages $replace"
64     else
65     new_packages="$new_packages $i"
66     fi
67     done
68     PACKAGES=$new_packages
69     rm -f ./p[1,2].tmp
70 adcroft 1.74 return $matched
71 edhill 1.12 else
72     echo "Warning: can't read package groups definition file: $PKG_GROUPS"
73     fi
74     }
75 edhill 1.1
76 edhill 1.75 # Check for broken environments (eg. cygwin, MacOSX w/HFS+) that
77     # cannot distinguish [*.F/*.F90] from [*.f/*.f90] files.
78     check_for_broken_Ff() {
79 edhill 1.76 # Do we have defaults for $FS and/or $FS90 ?
80     tfs=f
81     tfs9=f90
82     if test "x$FS" != x ; then
83     tfs="$FS"
84     fi
85     if test "x$FS90" != x ; then
86     tfs9="$FS90"
87     fi
88    
89 edhill 1.75 # First check the ability to create a *.F/.f pair.
90 edhill 1.76 cat <<EOF >> genmake_hello.F
91 edhill 1.75 program hello
92     write(*,*) 'hi'
93     stop
94     end
95     EOF
96 edhill 1.76 cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1
97 edhill 1.75 RETVAL=$?
98     if test "x$RETVAL" != x0 ; then
99 edhill 1.76 if test "x$FS" = x ; then
100 edhill 1.77 FS='for'
101     FS90='fr9'
102 edhill 1.76 check_for_broken_Ff
103     else
104     cat <<EOF 2>&1
105     ERROR: Your file system cannot distinguish between *.F and *.f files
106     (fails the "cp" test) and this program cannot find a suitable
107     replacement extension. Please try a different build environment or
108     contact the <MITgcm-support@mitgcm.org> list for help.
109    
110     EOF
111     exit -1
112     fi
113 edhill 1.75 return
114     fi
115 edhill 1.76 rm -f genmake_hello.*
116 edhill 1.75
117 edhill 1.76 # Check the ability of ${MAKE} and ${LN} to use the current set
118     # of extensions.
119     cat <<EOF >> genmake_hello.F
120     program hello
121     write(*,*) 'hi'
122     stop
123     end
124     EOF
125 edhill 1.119 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
126     cat <<EOF >> $MAKEFILE
127 edhill 1.75 .SUFFIXES:
128 edhill 1.101 .SUFFIXES: .$tfs .F
129     .F.$tfs:
130     $LN \$< \$@
131 edhill 1.75 EOF
132 edhill 1.76 $MAKE "genmake_hello."$tfs > /dev/null 2>&1
133 edhill 1.75 RETVAL=$?
134 edhill 1.88 if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then
135 edhill 1.76 if test "x$FS" = x ; then
136 edhill 1.77 FS='for'
137     FS90='fr9'
138 edhill 1.76 check_for_broken_Ff
139     else
140     cat <<EOF 2>&1
141     ERROR: Your file system cannot distinguish between *.F and *.f files
142     (fails the "make/ln" test) and this program cannot find a suitable
143     replacement extension. Please try a different build environment or
144     contact the <MITgcm-support@mitgcm.org> list for help.
145    
146     EOF
147     exit -1
148     return
149     fi
150 edhill 1.75 fi
151 edhill 1.119 rm -f genmake_hello.* $MAKEFILE
152     test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
153 edhill 1.75
154 edhill 1.76 # If we make it here, use the extensions
155     FS=$tfs
156     FS90=$tfs9
157     return
158 edhill 1.75 }
159    
160    
161 edhill 1.84 look_for_makedepend() {
162 adcroft 1.33
163 edhill 1.69 # The "original" makedepend is part of the Imake system that is
164     # most often distributed with XFree86 or with an XFree86 source
165     # package. As a result, many machines (eg. generic Linux) do not
166     # have a system-default "makedepend" available. For those
167     # systems, we have two fall-back options:
168     #
169     # 1) a makedepend implementation shipped with the cyrus-imapd
170     # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
171     #
172     # 2) a known-buggy xmakedpend shell script
173     #
174     # So the choices are, in order:
175     #
176     # 1) use the user-specified program
177     # 2) use a system-wide default
178     # 3) locally build and use the cyrus implementation
179     # 4) fall back to the buggy local xmakedpend script
180     #
181 adcroft 1.33 if test "x${MAKEDEPEND}" = x ; then
182 edhill 1.85 which makedepend > /dev/null 2>&1
183     RV0=$?
184 edhill 1.119 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
185     # echo 'MAKEFILE="'$MAKEFILE'"'
186     cat <<EOF >> $MAKEFILE
187     # THIS IS A TEST MAKEFILE GENERATED BY "genmake2"
188     #
189     # Some "makedepend" implementations will die if they cannot
190     # find a Makefile -- so this file is here to gives them an
191     # empty one to find and parse.
192     EOF
193 edhill 1.85 cat <<EOF >> genmake_tc.f
194 edhill 1.77 program test
195     write(*,*) 'test'
196     stop
197     end
198     EOF
199 edhill 1.85 makedepend genmake_tc.f > /dev/null 2>&1
200 mlosch 1.120 RV1=$?
201 edhill 1.119 test -f $MAKEFILE && rm -f $MAKEFILE
202     test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
203 edhill 1.85 if test "x${RV0}${RV1}" = x00 ; then
204     MAKEDEPEND=makedepend
205     else
206     echo " a system-default makedepend was not found."
207    
208     # Try to build the cyrus implementation
209 edhill 1.90 build_cyrus_makedepend
210 edhill 1.85 RETVAL=$?
211 edhill 1.90 if test "x$RETVAL" != x0 ; then
212 edhill 1.85 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
213     fi
214     rm -f ./genmake_cy_md
215     fi
216 edhill 1.90 else
217     # echo "MAKEDEPEND=${MAKEDEPEND}"
218     echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1
219     RETVAL=$?
220     if test x"$RETVAL" = x0 ; then
221     build_cyrus_makedepend
222     fi
223 edhill 1.1 fi
224 edhill 1.84 }
225    
226    
227 edhill 1.90 build_cyrus_makedepend() {
228     rm -f ./genmake_cy_md
229     (
230     cd $ROOTDIR/tools/cyrus-imapd-makedepend \
231     && ./configure > /dev/null 2>&1 \
232     && make > /dev/null 2>&1
233     if test -x ./makedepend.exe ; then
234     $LN ./makedepend.exe ./makedepend
235     fi
236     ./makedepend ifparser.c > /dev/null 2>&1 \
237     && echo "true"
238     ) > ./genmake_cy_md
239     grep true ./genmake_cy_md > /dev/null 2>&1
240     RETVAL=$?
241     rm -f ./genmake_cy_md
242     if test "x$RETVAL" = x0 ; then
243     MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
244     return 0
245     else
246     echo "WARNING: unable to build cyrus-imapd-makedepend"
247     return 1
248     fi
249     }
250    
251 edhill 1.141
252     build_embed_encode()
253     {
254     printf " building the embed-encode utility... "
255     if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then
256     if test ! -d "$ROOTDIR/tools/embed_encode" ; then
257     echo
258     echo " Error: can't locate \"$ROOTDIR/tools/embed_encode\""
259     echo
260     EMBED_SRC=f
261     return 1
262     fi
263     clist="cc gcc c89 $CC"
264     for ic in $clist ; do
265     comm="$ic -o encode_files encode_files.c"
266     ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1
267     RETVAL=$?
268     if test "x$RETVAL" = x0 ; then
269     echo "OK"
270     DEFINES="$DEFINES -DHAVE_EMBED_SRC"
271     return 0
272     fi
273     done
274     echo
275     echo " Error: unable to build $ROOTDIR/embed_encode/encode_files"
276     echo " so it has been disabled"
277     echo
278     EMBED_SRC=f
279     return 1
280     fi
281     echo "OK"
282     DEFINES="$DEFINES -DHAVE_EMBED_SRC"
283     }
284    
285    
286 edhill 1.84 # Guess possible config options for this host
287     find_possible_configs() {
288    
289     tmp1=`uname`"_"`uname -m`
290     tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
291     tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
292     tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
293     tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
294     tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'`
295     PLATFORM=$tmp3
296     echo $PLATFORM | grep cygwin > /dev/null 2>&1 && PLATFORM=cygwin_ia32
297     OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
298     echo " The platform appears to be: $PLATFORM"
299    
300     echo "test" > test
301     ln -s ./test link
302     RETVAL=$?
303     if test "x${RETVAL}" = x0 ; then
304     LN="ln -s"
305     else
306     echo "Error: \"ln -s\" does not appear to work on this system!"
307     echo " For help, please contact <MITgcm-support@mitgcm.org>."
308     exit 1
309     fi
310     rm -f test link
311    
312     if test "x$CPP" = x ; then
313     CPP="cpp -traditional -P"
314     fi
315    
316     look_for_makedepend
317 edhill 1.1
318 edhill 1.91 #================================================================
319     # look for possible C compilers
320     tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc"
321     p_CC=
322     for c in $tmp ; do
323     rm -f ./genmake_hello.c ./genmake_hello
324     cat >> genmake_hello.c << EOF
325     #include <stdio.h>
326     int main(int argc, char **argv) {
327     printf("Hello!\n");
328     return 0;
329     }
330     EOF
331     $c -o genmake_hello genmake_hello.c > /dev/null 2>&1
332     RETVAL=$?
333     if test "x${RETVAL}" = x0 ; then
334     p_CC="$p_CC $c"
335     fi
336     done
337     rm -f ./genmake_hello.c ./genmake_hello
338     if test "x${p_CC}" = x ; then
339     cat 1>&2 <<EOF
340    
341     Error: No C compilers were found in your path. Please specify one using:
342    
343     1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
344     2) the CC or MITGCM_CC environment variables.
345    
346     EOF
347     exit 1
348     else
349     echo " The possible C compilers found in your path are:"
350     echo " "$p_CC
351     if test "x$CC" = x ; then
352     CC=`echo $p_CC | $AWK '{print $1}'`
353     echo " Setting C compiler to: "$CC
354     fi
355     fi
356    
357     #================================================================
358     # look for possible FORTRAN compilers
359 edhill 1.123 tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95 gfortran"
360 edhill 1.1 p_FC=
361 edhill 1.11 for c in $tmp ; do
362     rm -f ./hello.f ./hello
363     cat >> hello.f <<EOF
364     program hello
365     do i=1,3
366     print *, 'hello world : ', i
367     enddo
368     end
369     EOF
370     $c -o hello hello.f > /dev/null 2>&1
371 edhill 1.1 RETVAL=$?
372     if test "x${RETVAL}" = x0 ; then
373     p_FC="$p_FC $c"
374     fi
375     done
376 edhill 1.21 rm -f ./hello.f ./hello
377 edhill 1.1 if test "x${p_FC}" = x ; then
378 edhill 1.11 cat 1>&2 <<EOF
379    
380     Error: No Fortran compilers were found in your path. Please specify one using:
381    
382     1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
383     2) a command-line option (eg. "-fc NAME"), or
384 edhill 1.91 3) the FC or MITGCM_FC environment variables.
385 edhill 1.11
386     EOF
387     exit 1
388 edhill 1.1 else
389 edhill 1.11 echo " The possible FORTRAN compilers found in your path are:"
390     echo " "$p_FC
391 edhill 1.136 fi
392    
393     # Use the first of the compilers found in the current PATH
394     # that has a correctly-named optfile
395     if test "x$OPTFILE" = x -a "x$FC" = x ; then
396     for i in $p_FC ; do
397     OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
398     if test -r $OPTFILE ; then
399     echo " Setting OPTFILE to: "$OPTFILE
400     break
401     fi
402     done
403 edhill 1.1 fi
404    
405 adcroft 1.67 if test "x$OPTFILE" = x ; then
406     OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
407     if test ! -r $OPTFILE ; then
408     echo " I looked for the file "$OPTFILE" but did not find it"
409     fi
410     fi
411     # echo " The options file: $p_OF"
412     # echo " appears to match so we'll use it."
413     # for i in $p_FC ; do
414     #p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
415     #if test -r $p_OF ; then
416     # OPTFILE=$p_OF
417     # echo " The options file: $p_OF"
418     # echo " appears to match so we'll use it."
419     # break
420     #fi
421     # done
422 edhill 1.11 if test "x$OPTFILE" = x ; then
423     cat 1>&2 <<EOF
424    
425     Error: No options file was found in: $ROOTDIR/tools/build_options/
426     that matches this platform ("$PLATFORM") and the compilers found in
427     your path. Please specify an "optfile" using:
428    
429     1) the command line (eg. "-optfile=path/to/OPTFILE"), or
430     2) the MITGCM_OF environment variable.
431    
432     If you need help, please contact the developers at <MITgcm-support@mitgcm.org>.
433    
434 edhill 1.1 EOF
435 edhill 1.11 exit 1
436 edhill 1.1 fi
437 edhill 1.11
438     # # look for possible MPI libraries
439     # mpi_libs=
440     # mpi_fort=`which mpif77 2>/dev/null`
441     # RETVAL=$?
442     # if test "x${RETVAL}" = x0 ; then
443     # cat >>test.f <<EOF
444     # PROGRAM HELLO
445     # DO 10, I=1,10
446     # PRINT *,'Hello World'
447     # 10 CONTINUE
448     # STOP
449     # END
450     # EOF
451     # eval "$mpi_fort -showme test.f > out"
452     # RETVAL=$?
453     # if test "x${RETVAL}" = x0 ; then
454     # a=`cat out`
455     # for i in $a ; do
456     # case $i in
457     # -*)
458     # mpi_libs="$mpi_libs $i" ;;
459     # esac
460     # done
461     # echo "The MPI libs appear to be:"
462     # echo " "$mpi_libs
463     # fi
464     # rm -f test.f out
465     # fi
466 edhill 1.1
467     }
468    
469     # Parse the package dependency information
470     get_pdepend_list() {
471    
472     # strip the comments and then convert the dependency file into
473     # two arrays: PNAME, DNAME
474     cat $1 | sed -e 's/#.*$//g' \
475 edhill 1.15 | $AWK 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \
476 edhill 1.1 > ./.pd_tmp
477 edhill 1.34 . ./.pd_tmp
478 edhill 1.1 rm -f ./.pd_tmp
479    
480 edhill 1.71 printf "PNAME = "${}
481 edhill 1.1 }
482    
483    
484     # Explain usage
485     usage() {
486 edhill 1.41 cat <<EOF
487    
488     Usage: "$0" [OPTIONS]
489     where [OPTIONS] can be:
490    
491     -help | --help | -h | --h
492     Print this help message and exit.
493 edhill 1.79
494     -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
495     -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
496     Use "NAME" as the adoptfile. By default, the file at
497     "tools/adjoint_options/adjoint_default" will be used.
498 edhill 1.41
499     -nooptfile | --nooptfile
500     -optfile NAME | --optfile NAME | -of NAME | --of NAME
501     -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
502     Use "NAME" as the optfile. By default, an attempt will be
503     made to find an appropriate "standard" optfile in the
504     tools/build_options/ directory.
505    
506     -pdepend NAME | --pdepend NAME
507     -pdepend=NAME | --pdepend=NAME
508     Get package dependency information from "NAME".
509    
510     -pdefault NAME | --pdefault NAME
511     -pdefault=NAME | --pdefault=NAME
512     Get the default package list from "NAME".
513    
514     -make NAME | -m NAME
515     --make=NAME | -m=NAME
516     Use "NAME" for the MAKE program. The default is "make" but
517     many platforms, "gmake" is the preferred choice.
518    
519     -makefile NAME | -mf NAME
520     --makefile=NAME | -mf=NAME
521     Call the makefile "NAME". The default is "Makefile".
522    
523 edhill 1.69 -makedepend NAME | -md NAME
524     --makedepend=NAME | -md=NAME
525     Use "NAME" for the MAKEDEPEND program.
526    
527 edhill 1.41 -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
528     -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
529     Specify the location of the MITgcm ROOTDIR as "NAME".
530     By default, genamke will try to find the location by
531     looking in parent directories (up to the 5th parent).
532    
533     -mods NAME | --mods NAME | -mo NAME | --mo NAME
534     -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME
535     Here, "NAME" specifies a list of directories that are
536     used for additional source code. Files found in the
537     "mods list" are given preference over files of the same
538     name found elsewhere.
539    
540     -disable NAME | --disable NAME
541     -disable=NAME | --disable=NAME
542     Here "NAME" specifies a list of packages that we don't
543     want to use. If this violates package dependencies,
544     genamke will exit with an error message.
545    
546     -enable NAME | --enable NAME
547     -enable=NAME | --enable=NAME
548     Here "NAME" specifies a list of packages that we wish
549     to specifically enable. If this violates package
550     dependencies, genamke will exit with an error message.
551    
552     -standarddirs NAME | --standarddirs NAME
553     -standarddirs=NAME | --standarddirs=NAME
554     Here, "NAME" specifies a list of directories to be
555     used as the "standard" code.
556    
557     -fortran NAME | --fortran NAME | -fc NAME | --fc NAME
558     -fc=NAME | --fc=NAME
559     Use "NAME" as the fortran compiler. By default, genmake
560     will search for a working compiler by trying a list of
561     "usual suspects" such as g77, f77, etc.
562    
563 edhill 1.91 -cc NAME | --cc NAME | -cc=NAME | --cc=NAME
564     Use "NAME" as the C compiler. By default, genmake
565     will search for a working compiler by trying a list of
566     "usual suspects" such as gcc, c89, cc, etc.
567    
568 edhill 1.41 -[no]ieee | --[no]ieee
569     Do or don't use IEEE numerics. Note that this option
570     *only* works if it is supported by the OPTFILE that
571     is being used.
572    
573 edhill 1.143 -ignoretime | -ignore_time | --ignoretime | --ignore_time
574     Ignore all the "wall clock" routines entirely. This will
575     not in any way hurt the model results -- it simply means
576     that the code that checks how long the model spends in
577     various routines will give junk values.
578    
579 ce107 1.126 -ts | --ts
580     Produce timing information per timestep
581 ce107 1.139 -papis | --papis
582     Produce summary MFlop/s with PAPI per timestep
583     -foolad | --foolad
584     Fool the AD code generator
585     -papi | --papi
586     Performance analysis with PAPI
587     -hpmt | --hpmt
588     Performance analysis with the HPM Toolkit
589    
590     -gsl | --gsl
591     Use GSL to control floating point rounding and precision
592 ce107 1.126
593 adcroft 1.67 -mpi | --mpi
594     Include MPI header files and link to MPI libraries
595     -mpi=PATH | --mpi=PATH
596     Include MPI header files and link to MPI libraries using MPI_ROOT
597 edhill 1.95 set to PATH. i.e. Include files from \$PATH/include, link to libraries
598     from \$PATH/lib and use binaries from \$PATH/bin.
599 adcroft 1.67
600 edhill 1.141 -es | --es | -embed-source | --embed-source
601     Embed a tarball containing the full source code
602     (including the Makefile, etc.) used to build the
603     executable [off by default]
604    
605 edhill 1.71 -bash NAME
606     Explicitly specify the Bourne or BASH shell to use
607    
608 edhill 1.41 While it is most often a single word, the "NAME" variables specified
609     above can in many cases be a space-delimited string such as:
610    
611     --enable pkg1 --enable 'pkg1 pkg2' --enable 'pkg1 pkg2 pkg3'
612     -mods=dir1 -mods='dir1' -mods='dir1 dir2 dir3'
613     -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'
614    
615     which, depending upon your shell, may need to be single-quoted.
616    
617     For more detailed genmake documentation, please see:
618    
619     http://mitgcm.org/devel_HOWTO/
620    
621     EOF
622    
623 edhill 1.1 exit 1
624     }
625    
626 edhill 1.31 # Build a CPP macro to automate calling C routines from FORTRAN
627     get_fortran_c_namemangling() {
628 edhill 1.89
629     #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\""
630     if test ! "x$FC_NAMEMANGLE" = x ; then
631     return 0
632     fi
633    
634 edhill 1.31 default_nm="#define FC_NAMEMANGLE(X) X ## _"
635    
636     cat > genmake_test.c <<EOF
637     void tcall( char * string ) { tsub( string ); }
638     EOF
639 edhill 1.39 $MAKE genmake_test.o >> genmake_warnings 2>&1
640 edhill 1.31 RETVAL=$?
641     if test "x$RETVAL" != x0 ; then
642     FC_NAMEMANGLE=$default_nm
643 edhill 1.39 cat <<EOF>> genmake_errors
644    
645     WARNING: C test compile fails
646     WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
647     WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
648     EOF
649 edhill 1.31 return 1
650     fi
651 edhill 1.91 c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
652 edhill 1.31 RETVAL=$?
653     if test "x$RETVAL" != x0 ; then
654     FC_NAMEMANGLE=$default_nm
655 edhill 1.39 cat <<EOF>> genmake_warnings
656    
657     WARNING: The "nm" command failed.
658     WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
659     WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
660     EOF
661 edhill 1.31 return 1
662     fi
663 edhill 1.118 cat > genmake_tcomp.$FS <<EOF
664 edhill 1.31 subroutine tcall( string )
665     character*(*) string
666     call tsub( string )
667     end
668     EOF
669 edhill 1.134 $FC $FFLAGS -c genmake_tcomp.$FS >> genmake_warnings 2>&1
670 edhill 1.31 RETVAL=$?
671     if test "x$RETVAL" != x0 ; then
672     FC_NAMEMANGLE=$default_nm
673 edhill 1.39 cat <<EOF>> genmake_warnings
674    
675     WARNING: FORTRAN test compile fails -- please see "genmake_errors"
676     WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
677     WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
678     EOF
679 edhill 1.31 return 1
680     fi
681 edhill 1.91 f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
682 edhill 1.31 RETVAL=$?
683     if test "x$RETVAL" != x0 ; then
684     FC_NAMEMANGLE=$default_nm
685 edhill 1.39 cat <<EOF>> genmake_warnings
686    
687     WARNING: The "nm" command failed.
688     WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
689     WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
690     EOF
691 edhill 1.31 return 1
692     fi
693    
694     c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
695     f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
696     c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
697     f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
698    
699     nmangle="X"
700     if test "x$c_a" != "x$f_a" ; then
701     comm="echo x$f_a | sed -e 's|x$c_a||'"
702     a=`eval $comm`
703     nmangle="$a ## $nmangle"
704     fi
705     if test "x$c_b" != "x$f_b" ; then
706     comm="echo x$f_b | sed -e 's|x$c_b||'"
707     b=`eval $comm`
708     nmangle="$nmangle ## $b"
709     fi
710    
711     FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) $nmangle"
712 edhill 1.32
713     # cleanup the testing files
714     rm -f genmake_tcomp.* genmake_test.*
715 edhill 1.31 }
716 edhill 1.1
717 edhill 1.39
718     check_HAVE_CLOC() {
719     get_fortran_c_namemangling
720     cat <<EOF > genmake_tc_1.c
721     $FC_NAMEMANGLE
722     #include <stdio.h>
723     #include <stdlib.h>
724     #include <unistd.h>
725     #include <assert.h>
726     #include <sys/time.h>
727     void FC_NAMEMANGLE(cloc) ( double *curtim )
728     {
729     struct timeval tv1;
730     gettimeofday(&tv1 , (void *)NULL );
731     *curtim = (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6);
732     *curtim = *curtim/1.E6;
733     }
734     EOF
735 edhill 1.118 make genmake_tc_1.o >> genmake_warnings 2>&1
736 edhill 1.39 RET_C=$?
737 edhill 1.118 cat <<EOF > genmake_tc_2.$FS
738 edhill 1.39 program hello
739 edhill 1.129 REAL*8 wtime
740 edhill 1.39 external cloc
741     call cloc(wtime)
742     print *," HELLO WORLD", wtime
743 edhill 1.128 end
744 edhill 1.39 EOF
745 edhill 1.118 $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1
746 edhill 1.39 RET_F=$?
747 edhill 1.118 test -x ./genmake_tc && ./genmake_tc >> genmake_warnings 2>&1
748 edhill 1.39 RETVAL=$?
749     if test "x$RETVAL" = x0 ; then
750     HAVE_CLOC=t
751     DEFINES="$DEFINES -DHAVE_CLOC"
752     fi
753     rm -f genmake_tc*
754     }
755    
756    
757 edhill 1.137 check_HAVE_SIGREG() {
758     get_fortran_c_namemangling
759     cat <<EOF > genmake_tc_1.c
760     $FC_NAMEMANGLE
761     #include <stdlib.h>
762     #include <stdio.h>
763     #include <signal.h>
764     #include <errno.h>
765     #include <ucontext.h>
766    
767     int * ip;
768    
769     static void killhandler(
770     unsigned int sn, siginfo_t si, struct ucontext *sc )
771     {
772     *ip = *ip + 1;
773     return;
774     }
775    
776     void FC_NAMEMANGLE(sigreg) (int * aip)
777     {
778 edhill 1.138 struct sigaction s;
779 edhill 1.137 ip = aip;
780     s.sa_flags = SA_SIGINFO;
781     s.sa_sigaction = (void *)killhandler;
782     if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) {
783     printf("Sigaction returned error = %d\n", errno);
784     exit(0);
785     }
786     return;
787     }
788     EOF
789     make genmake_tc_1.o >> genmake_warnings 2>&1
790     RET_C=$?
791     cat <<EOF > genmake_tc_2.$FS
792     program hello
793     integer anint
794     common /iv/ anint
795     external sigreg
796     call sigreg(anint)
797     end
798     EOF
799     echo >> genmake_warnings
800     echo "running: check_HAVE_SIGREG()" >> genmake_warnings
801     cat genmake_tc_2.$FS >> genmake_warnings
802     COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
803     echo $COMM >> genmake_warnings
804     $COMM >> genmake_warnings 2>&1
805     RETVAL=$?
806     if test "x$RETVAL" = x0 ; then
807     HAVE_SIGREG=t
808     DEFINES="$DEFINES -DHAVE_SIGREG"
809     fi
810     rm -f genmake_tc*
811     }
812    
813    
814 edhill 1.130 check_HAVE_SETRLSTK() {
815     get_fortran_c_namemangling
816     cat <<EOF > genmake_tc_1.c
817     $FC_NAMEMANGLE
818     #include <sys/time.h>
819     #include <sys/resource.h>
820     #include <unistd.h>
821     void FC_NAMEMANGLE(setrlstk) ()
822     {
823     struct rlimit rls;
824     rls.rlim_cur = RLIM_INFINITY;
825     rls.rlim_max = RLIM_INFINITY;
826     setrlimit(RLIMIT_STACK, &rls);
827     return;
828     }
829     EOF
830     make genmake_tc_1.o >> genmake_warnings 2>&1
831     RET_C=$?
832     cat <<EOF > genmake_tc_2.$FS
833     program hello
834     external setrlstk
835     call setrlstk()
836     end
837     EOF
838 edhill 1.135 echo >> genmake_warnings
839     echo "running: check_HAVE_SETRLSTK()" >> genmake_warnings
840     cat genmake_tc_2.$FS >> genmake_warnings
841     COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
842     echo $COMM >> genmake_warnings
843     $COMM >> genmake_warnings 2>&1
844 edhill 1.130 RETVAL=$?
845     if test "x$RETVAL" = x0 ; then
846     HAVE_SETRLSTK=t
847     DEFINES="$DEFINES -DHAVE_SETRLSTK"
848     fi
849     rm -f genmake_tc*
850     }
851    
852    
853 edhill 1.108 check_HAVE_STAT() {
854     get_fortran_c_namemangling
855     cat <<EOF > genmake_tc_1.c
856     $FC_NAMEMANGLE
857     #include <stdio.h>
858     #include <stdlib.h>
859     #include <unistd.h>
860     #include <sys/stat.h>
861     #include <sys/types.h>
862     void FC_NAMEMANGLE(tfsize) ( int *nbyte )
863     {
864     char name[512];
865     struct stat astat;
866    
867     name[0] = 'a'; name[1] = '\0';
868     if (! stat(name, &astat))
869     *nbyte = (int)(astat.st_size);
870     else
871     *nbyte = -1;
872     }
873     EOF
874     make genmake_tc_1.o >> genmake_tc.log 2>&1
875     RET_C=$?
876 edhill 1.118 cat <<EOF > genmake_tc_2.$FS
877 edhill 1.108 program hello
878     integer nbyte
879     call tfsize(nbyte)
880     print *," HELLO WORLD", nbyte
881 edhill 1.128 end
882 edhill 1.108 EOF
883 edhill 1.135 echo >> genmake_warnings
884     echo "running: check_HAVE_STAT()" >> genmake_warnings
885     cat genmake_tc_2.$FS >> genmake_warnings
886     COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
887     echo $COMM >> genmake_warnings
888     $COMM >> genmake_tc.log 2>&1
889 edhill 1.108 RETVAL=$?
890     if test "x$RETVAL" = x0 ; then
891     HAVE_STAT=t
892     DEFINES="$DEFINES -DHAVE_STAT"
893     fi
894     rm -f genmake_tc*
895     }
896    
897    
898 edhill 1.60 check_netcdf_libs() {
899 edhill 1.113 if test ! "x$SKIP_NETCDF_CHECK" = x ; then
900     return
901     fi
902 edhill 1.135 echo >> genmake_warnings
903     echo "running: check_netcdf_libs()" >> genmake_warnings
904 edhill 1.117 cat <<EOF > genmake_tnc.F
905 edhill 1.60 program fgennc
906     #include "netcdf.inc"
907 edhill 1.113 EOF
908     if test ! "x$MPI" = x ; then
909 edhill 1.117 echo '#include "mpif.h"' >> genmake_tnc.F
910 edhill 1.113 fi
911 edhill 1.117 cat <<EOF >> genmake_tnc.F
912 edhill 1.60 integer iret, ncid, xid
913     iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
914     IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
915     iret = nf_def_dim(ncid, 'X', 11, xid)
916     IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
917     iret = nf_close(ncid)
918     IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
919     end
920     EOF
921 edhill 1.135 echo "=== genmake_tnc.F ===" > genmake_tnc.log
922     cat genmake_tnc.F >> genmake_tnc.log
923     echo "=== genmake_tnc.F ===" >> genmake_tnc.log
924 edhill 1.111 RET_CPP=f
925 edhill 1.135 COMM="$CPP $DEFINES $INCLUDES genmake_tnc.F"
926     echo "$COMM" >> genmake_tnc.log
927     $COMM > genmake_tnc.$FS 2>/dev/null && RET_CPP=t
928 edhill 1.111 if test "x$RET_CPP" = xf ; then
929     echo " WARNING: CPP failed to pre-process the netcdf test." \
930 edhill 1.133 >> genmake_tnc.log
931 edhill 1.111 echo " Please check that \$INCLUDES is properly set." \
932 edhill 1.133 >> genmake_tnc.log
933 edhill 1.111 fi
934 edhill 1.135 echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
935     echo " && $LINK -o genmake_tnc.o $LIBS" >> genmake_tnc.log
936 edhill 1.117 $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
937 edhill 1.96 && $LINK -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
938 edhill 1.60 RET_COMPILE=$?
939 edhill 1.135 cat genmake_tnc.log >> genmake_warnings
940 edhill 1.99
941     #EH3 Remove test program execution for machines that either disallow
942     #EH3 execution or cannot support it (eg. cross-compilers)
943     #EH3
944     #EH3 test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1
945     #EH3 RETVAL=$?
946     #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
947    
948     if test "x$RET_COMPILE" = x0 ; then
949 edhill 1.60 HAVE_NETCDF=t
950     else
951 edhill 1.66 # try again with "-lnetcdf" added to the libs
952 edhill 1.135 echo "try again with added '-lnetcdf'" > genmake_tnc.log
953 edhill 1.133 echo "$CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS \ " >> genmake_tnc.log
954     echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
955     echo " && $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
956 edhill 1.117 $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null \
957     && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
958 edhill 1.99 && $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
959 edhill 1.66 RET_COMPILE=$?
960 edhill 1.135 cat genmake_tnc.log >> genmake_warnings
961 edhill 1.99 if test "x$RET_COMPILE" = x0 ; then
962 edhill 1.66 LIBS="$LIBS -lnetcdf"
963     HAVE_NETCDF=t
964     fi
965 edhill 1.60 fi
966     rm -f genmake_tnc*
967     }
968    
969    
970 adcroft 1.67
971     ###############################################################################
972     # Sequential part of script starts here
973     ###############################################################################
974    
975 edhill 1.1 # Set defaults here
976 edhill 1.5 COMMANDL="$0 $@"
977    
978 edhill 1.1 PLATFORM=
979     LN=
980     S64=
981     KPP=
982 edhill 1.114 #FC=
983 edhill 1.93 #CC=gcc
984 edhill 1.114 #CPP=
985 edhill 1.1 LINK=
986 edhill 1.31 DEFINES=
987 edhill 1.1 PACKAGES=
988     ENABLE=
989     DISABLE=
990 edhill 1.119 # MAKEFILE=
991     # MAKEDEPEND=
992 edhill 1.1 PDEPEND=
993 edhill 1.11 DUMPSTATE=t
994 edhill 1.1 PDEFAULT=
995     OPTFILE=
996 edhill 1.111 INCLUDES="-I. $INCLUDES"
997 edhill 1.1 FFLAGS=
998     FOPTIM=
999     CFLAGS=
1000     KFLAGS1=
1001     KFLAGS2=
1002 edhill 1.70 #LDADD=
1003 edhill 1.1 LIBS=
1004     KPPFILES=
1005     NOOPTFILES=
1006     NOOPTFLAGS=
1007 adcroft 1.67 MPI=
1008     MPIPATH=
1009 ce107 1.126 TS=
1010 ce107 1.139 PAPIS=
1011     FOOLAD=
1012     PAPI=
1013     HPMT=
1014     GSL=
1015 edhill 1.131 HAVE_TEST_L=
1016 edhill 1.1
1017 edhill 1.124 # DEFINES checked by test compilation or command-line
1018 edhill 1.29 HAVE_SYSTEM=
1019     HAVE_FDATE=
1020     FC_NAMEMANGLE=
1021 edhill 1.39 HAVE_CLOC=
1022 edhill 1.130 HAVE_SETRLSTK=
1023 edhill 1.108 HAVE_STAT=
1024 edhill 1.60 HAVE_NETCDF=
1025 cnh 1.81 HAVE_ETIME=
1026 edhill 1.124 IGNORE_TIME=
1027 edhill 1.29
1028 edhill 1.1 MODS=
1029     TOOLSDIR=
1030     SOURCEDIRS=
1031     INCLUDEDIRS=
1032 edhill 1.57 STANDARDDIRS="USE_THE_DEFAULT"
1033 edhill 1.1
1034 edhill 1.73 G2ARGS=
1035 edhill 1.71 BASH=
1036 edhill 1.1 PWD=`pwd`
1037 edhill 1.114 test "x$MAKE" = x && MAKE=make
1038     test "x$AWK" = x && AWK=awk
1039 edhill 1.141 EMBED_SRC=
1040 edhill 1.97 THISHOST=`hostname`
1041 edhill 1.1 THISCWD=`pwd`
1042     THISDATE=`date`
1043 edhill 1.97 THISUSER=`echo $USER`
1044     THISVER=
1045 edhill 1.1 MACHINE=`uname -a`
1046 edhill 1.7 EXECUTABLE=
1047     EXEHOOK=
1048     EXEDIR=
1049 edhill 1.12 PACKAGES_CONF=
1050     IEEE=
1051     if test "x$MITGCM_IEEE" != x ; then
1052     IEEE=$MITGCM_IEEE
1053     fi
1054 edhill 1.76 FS=
1055     FS90=
1056 edhill 1.1
1057 edhill 1.14 AUTODIFF_PKG_USED=f
1058     AD_OPTFILE=
1059 edhill 1.17 TAF=
1060     AD_TAF_FLAGS=
1061     FTL_TAF_FLAGS=
1062     SVD_TAF_FLAGS=
1063     TAF_EXTRA=
1064     TAMC=
1065     AD_TAMC_FLAGS=
1066     FTL_TAF_FLAGS=
1067     SVD_TAMC_FLAGS=
1068     TAMC_EXTRA=
1069    
1070 edhill 1.14
1071 edhill 1.5 # The following state can be set directly by command-line switches
1072 edhill 1.41 gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
1073 ce107 1.139 gm_s2="FC CPP IEEE TS PAPIS PAPI HPMT GSL MPI JAM DUMPSTATE STANDARDDIRS"
1074 edhill 1.5
1075     # The following state is not directly set by command-line switches
1076     gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
1077     gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
1078 edhill 1.97 gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"
1079 edhill 1.12 gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
1080 cnh 1.81 gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"
1081 edhill 1.5
1082 edhill 1.14 # The following are all related to adjoint/tangent-linear stuff
1083 edhill 1.29 gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
1084     gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"
1085     gm_s12="TAF_EXTRA TAMC_EXTRA"
1086 edhill 1.14
1087 edhill 1.29 gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7"
1088     gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"
1089 edhill 1.5
1090 edhill 1.41 cat <<EOF
1091    
1092     GENMAKE :
1093    
1094     A program for GENerating MAKEfiles for the MITgcm project. For a
1095     quick list of options, use "genmake -h" or for more detail see:
1096    
1097     http://mitgcm.org/devel_HOWTO/
1098    
1099     EOF
1100 edhill 1.5
1101 edhill 1.2 echo "=== Processing options files and arguments ==="
1102 edhill 1.12 gm_local="genmake_local"
1103     for i in . $MODS ; do
1104     if test -r $i/$gm_local ; then
1105 edhill 1.34 . $i/$gm_local
1106 edhill 1.12 break
1107     fi
1108     done
1109 edhill 1.71 printf " getting local config information: "
1110 edhill 1.88 if test -f $gm_local ; then
1111 edhill 1.1 echo "using $gm_local"
1112 edhill 1.34 . $gm_local
1113 edhill 1.2 # echo "DISABLE=$DISABLE"
1114     # echo "ENABLE=$ENABLE"
1115 edhill 1.1 else
1116     echo "none found"
1117     fi
1118    
1119 edhill 1.103 #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
1120 edhill 1.2 #OPTIONS=
1121     #n=0
1122     #for i ; do
1123     # echo "$i $n"
1124     # setvar="OPTIONS[$n]='$i'"
1125     # # echo " $setvar"
1126     # eval "$setvar"
1127     # n=$(( $n + 1 ))
1128     #done
1129     #parse_options
1130     ac_prev=
1131 edhill 1.102 for ac_option in "$@" ; do
1132 edhill 1.2
1133 edhill 1.73 G2ARGS="$G2ARGS \"$ac_option\""
1134    
1135 edhill 1.2 # If the previous option needs an argument, assign it.
1136     if test -n "$ac_prev"; then
1137     eval "$ac_prev=\$ac_option"
1138     ac_prev=
1139     continue
1140     fi
1141    
1142     ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
1143    
1144     case $ac_option in
1145    
1146     -help | --help | -h | --h)
1147     usage ;;
1148    
1149     -nooptfile | --nooptfile)
1150     OPTFILE="NONE" ;;
1151     -optfile | --optfile | -of | --of)
1152 edhill 1.4 ac_prev=OPTFILE ;;
1153 edhill 1.2 -optfile=* | --optfile=* | -of=* | --of=*)
1154     OPTFILE=$ac_optarg ;;
1155    
1156 edhill 1.50 -adoptfile | --adoptfile | -adof | --adof)
1157 edhill 1.14 ac_prev=AD_OPTFILE ;;
1158     -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
1159     AD_OPTFILE=$ac_optarg ;;
1160    
1161 edhill 1.2 -pdepend | --pdepend)
1162 edhill 1.4 ac_prev=PDEPEND ;;
1163 edhill 1.2 -pdepend=* | --pdepend=*)
1164     PDEPEND=$ac_optarg ;;
1165    
1166     -pdefault | --pdefault)
1167 edhill 1.4 ac_prev=PDEFAULT ;;
1168 edhill 1.2 -pdefault=* | --pdefault=*)
1169     PDEFAULT=$ac_optarg ;;
1170    
1171 edhill 1.6 -make | --make | -m | --m)
1172     ac_prev=MAKE ;;
1173     -make=* | --make=* | -m=* | --m=*)
1174     MAKE=$ac_optarg ;;
1175 edhill 1.69
1176 edhill 1.71 -bash | --bash)
1177     ac_prev=BASH ;;
1178     -bash=* | --bash=*)
1179     BASH=$ac_optarg ;;
1180    
1181 edhill 1.69 -makedepend | --makedepend | -md | --md)
1182     ac_prev=MAKEDEPEND ;;
1183     -makedepend=* | --makedepend=* | -md=* | --md=*)
1184     MAKEDEPEND=$ac_optarg ;;
1185 edhill 1.6
1186     -makefile | --makefile | -ma | --ma)
1187 edhill 1.4 ac_prev=MAKEFILE ;;
1188 edhill 1.6 -makefile=* | --makefile=* | -ma=* | --ma=*)
1189 edhill 1.2 MAKEFILE=$ac_optarg ;;
1190    
1191 edhill 1.41 -platform | --platform | -pl | --pl | -platform=* | --platform=* | -pl=* | --pl=*)
1192     echo "ERROR: The platform option has been removed. Please specify"
1193     echo " the build options using the \"optfile\" mechanism."
1194     echo
1195     usage
1196     ;;
1197 edhill 1.2
1198     -rootdir | --rootdir | -rd | --rd)
1199 edhill 1.4 ac_prev=ROOTDIR ;;
1200 edhill 1.2 -rootdir=* | --rootdir=* | -rd=* | --rd=*)
1201     ROOTDIR=$ac_optarg ;;
1202    
1203     -mods | --mods | -mo | --mo)
1204 edhill 1.4 ac_prev=MODS ;;
1205 edhill 1.2 -mods=* | --mods=* | -mo=* | --mo=*)
1206     MODS=$ac_optarg ;;
1207    
1208     -disable | --disable)
1209 edhill 1.4 ac_prev=DISABLE ;;
1210 edhill 1.2 -disable=* | --disable=*)
1211     DISABLE=$ac_optarg ;;
1212    
1213     -enable | --enable)
1214 edhill 1.4 ac_prev=ENABLE ;;
1215 edhill 1.2 -enable=* | --enable=*)
1216     ENABLE=$ac_optarg ;;
1217    
1218 edhill 1.12 -standarddirs | --standarddirs)
1219     ac_prev=STANDARDDIRS ;;
1220     -standarddirs=* | --standarddirs=*)
1221     STANDARDDIRS=$ac_optarg ;;
1222    
1223 edhill 1.2 # -cpp | --cpp)
1224     # ac_prev=cpp ;;
1225     # -cpp=* | --cpp=*)
1226     # CPP=$ac_optarg ;;
1227 edhill 1.91
1228     -cc | --cc)
1229     ac_prev=CC ;;
1230     -cc=* | --cc=*)
1231     CC=$ac_optarg ;;
1232    
1233 edhill 1.2 -fortran | --fortran | -fc | --fc)
1234 edhill 1.4 ac_prev=FC ;;
1235 edhill 1.2 -fc=* | --fc=*)
1236     FC=$ac_optarg ;;
1237    
1238 edhill 1.76 -fs | --fs)
1239     ac_prev=FS ;;
1240     -fs=* | --fs=*)
1241     FS=$ac_optarg ;;
1242    
1243     -fs90 | --fs90)
1244     ac_prev=FS90 ;;
1245     -fs90=* | --fs90=*)
1246     FS90=$ac_optarg ;;
1247    
1248 edhill 1.2 -ieee | --ieee)
1249 edhill 1.12 IEEE=true ;;
1250 edhill 1.2 -noieee | --noieee)
1251 edhill 1.12 IEEE= ;;
1252 adcroft 1.67
1253 ce107 1.126 -ts | --ts)
1254     TS=true ;;
1255 ce107 1.139 -papis | --papis)
1256     PAPIS=true ;;
1257     -foolad | --foolad)
1258     FOOLAD=true ;;
1259     -papi | --papi)
1260     PAPI=true ;;
1261     -hpmt | --hpmt)
1262     HPMT=true ;;
1263    
1264     -gsl | --gsl)
1265     GSL=true ;;
1266 ce107 1.126
1267 adcroft 1.67 -mpi | --mpi)
1268     MPI=true ;;
1269     -mpi=* | --mpi=*)
1270     MPIPATH=$ac_optarg
1271     MPI=true ;;
1272 edhill 1.2
1273 edhill 1.41 # -jam | --jam)
1274     # JAM=1 ;;
1275     # -nojam | --nojam)
1276     # JAM=0 ;;
1277 edhill 1.2
1278 edhill 1.5 -ds | --ds)
1279     DUMPSTATE=t ;;
1280    
1281 edhill 1.17 -taf_extra | --taf_extra)
1282     ac_prev=TAF_EXTRA ;;
1283     -taf_extra=* | --taf_extra=*)
1284     TAF_EXTRA=$ac_optarg ;;
1285    
1286     -tamc_extra | --tamc_extra)
1287     ac_prev=TAMC_EXTRA ;;
1288     -tamc_extra=* | --tamc_extra=*)
1289     TAMC_EXTRA=$ac_optarg ;;
1290 edhill 1.124
1291     -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1292     IGNORE_TIME="-DIGNORE_TIME" ;;
1293 edhill 1.17
1294 edhill 1.141 -es | --es | -embed-source | --embed-source)
1295     EMBED_SRC=t ;;
1296    
1297 edhill 1.2 -*)
1298     echo "Error: unrecognized option: "$ac_option
1299     usage
1300     ;;
1301    
1302     *)
1303     echo "Error: unrecognized argument: "$ac_option
1304     usage
1305     ;;
1306    
1307     esac
1308    
1309 edhill 1.1 done
1310    
1311 edhill 1.119
1312 edhill 1.12 if test -f ./.genmakerc ; then
1313     echo
1314     echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
1315     echo " file. This file format is no longer supported. Please see:"
1316     echo
1317     echo " http://mitgcm.org/devel_HOWTO/"
1318     echo
1319     echo " for directions on how to setup and use the new \"genmake2\" input"
1320     echo " files and send an email to MITgcm-support@mitgcm.org if you want help."
1321     echo
1322     fi
1323    
1324 edhill 1.97 # Find the MITgcm ${ROOTDIR}
1325 edhill 1.11 if test "x${ROOTDIR}" = x ; then
1326 edhill 1.112 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1327 edhill 1.87 if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then
1328 edhill 1.11 ROOTDIR=".."
1329     else
1330     for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
1331     if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
1332     ROOTDIR=$d
1333 edhill 1.71 printf "Warning: ROOTDIR was not specified but there appears to be"
1334 edhill 1.11 echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."
1335     break
1336     fi
1337     done
1338     fi
1339     fi
1340     if test "x${ROOTDIR}" = x ; then
1341     echo "Error: Cannot determine ROOTDIR for MITgcm code."
1342     echo " Please specify a ROOTDIR using either an options "
1343     echo " file or a command-line option."
1344     exit 1
1345     fi
1346     if test ! -d ${ROOTDIR} ; then
1347     echo "Error: the specified ROOTDIR (\"$ROOTDIR\") does not exist!"
1348     exit 1
1349     fi
1350    
1351 edhill 1.97 # Find the MITgcm ${THISVER}
1352     if test -f "${ROOTDIR}/doc/tag-index" ; then
1353 edhill 1.125 THISVER=`grep '^checkpoint' ${ROOTDIR}/doc/tag-index | head -1`
1354 edhill 1.97 fi
1355    
1356 edhill 1.119 if test "x$MAKEFILE" = x ; then
1357     MAKEFILE="Makefile"
1358     fi
1359    
1360 edhill 1.1 echo " getting OPTFILE information: "
1361     if test "x${OPTFILE}" = x ; then
1362 edhill 1.11 if test "x$MITGCM_OF" = x ; then
1363     echo "Warning: no OPTFILE specified so we'll look for possible settings"
1364     printf "\n=== Searching for possible settings for OPTFILE ===\n"
1365     find_possible_configs
1366 edhill 1.1 else
1367 edhill 1.11 OPTFILE=$MITGCM_OF
1368     fi
1369     fi
1370     if test "x$OPTFILE" != xNONE ; then
1371     if test -f "$OPTFILE" -a -r "$OPTFILE" ; then
1372     echo " using OPTFILE=\"$OPTFILE\""
1373 edhill 1.34 . "$OPTFILE"
1374 edhill 1.11 RETVAL=$?
1375     if test "x$RETVAL" != x0 ; then
1376 edhill 1.71 printf "Error: failed to source OPTFILE \"$OPTFILE\""
1377 edhill 1.11 echo "--please check that variable syntax is bash-compatible"
1378 edhill 1.1 exit 1
1379     fi
1380 edhill 1.11 if test "x$DUMPSTATE" != xf ; then
1381 edhill 1.12 cp -f $OPTFILE "genmake_optfile"
1382 edhill 1.11 fi
1383     else
1384     echo "Error: can't read OPTFILE=\"$OPTFILE\""
1385     exit 1
1386 edhill 1.1 fi
1387     fi
1388 edhill 1.8
1389 edhill 1.14 echo " getting AD_OPTFILE information: "
1390     if test "x${AD_OPTFILE}" = x ; then
1391     if test "x$MITGCM_AD_OF" = x ; then
1392     AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default
1393     else
1394     AD_OPTFILE=$MITGCM_AD_OF
1395     fi
1396     fi
1397     if test "x${AD_OPTFILE}" != xNONE ; then
1398     if test -f "$AD_OPTFILE" -a -r "$AD_OPTFILE" ; then
1399     echo " using AD_OPTFILE=\"$AD_OPTFILE\""
1400 edhill 1.34 . "$AD_OPTFILE"
1401 edhill 1.14 RETVAL=$?
1402     if test "x$RETVAL" != x0 ; then
1403 edhill 1.71 printf "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
1404 edhill 1.14 echo "--please check that variable syntax is bash-compatible"
1405     exit 1
1406     fi
1407     if test "x$DUMPSTATE" != xf ; then
1408     cp -f $AD_OPTFILE "genmake_ad_optfile"
1409     fi
1410     else
1411     echo "Error: can't read AD_OPTFILE=\"$AD_OPTFILE\""
1412     exit 1
1413     fi
1414     fi
1415    
1416 edhill 1.119 #====================================================================
1417     # Set default values if not set by the optfile
1418     #
1419 edhill 1.91 # Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined. If not,
1420 edhill 1.39 # either set defaults or complain and abort!
1421 edhill 1.71 if test ! "x$BASH" = x ; then
1422     # add a trailing space so that it works within the Makefile syntax (see below)
1423     BASH="$BASH "
1424     fi
1425 edhill 1.8 if test "x$FC" = x ; then
1426     cat <<EOF 1>&2
1427    
1428     Error: no Fortran compiler: please specify using one of the following:
1429     1) within the options file ("FC=...") as specified by "-of=OPTFILE"
1430     2) the "-fc=XXX" command-line option
1431 edhill 1.12 3) the "./genmake_local" file
1432 edhill 1.8 EOF
1433     exit 1
1434     fi
1435 edhill 1.91 if test "x$CC" = x ; then
1436 edhill 1.93 CC=cc
1437     # cat <<EOF 1>&2
1438     # Error: no C compiler: please specify using one of the following:
1439     # 1) within the options file ("CC=...") as specified by "-of=OPTFILE"
1440     # 2) the "-cc=XXX" command-line option
1441     # 3) the "./genmake_local" file
1442     # EOF
1443     # exit 1
1444 edhill 1.91 fi
1445 edhill 1.8 if test "x$LINK" = x ; then
1446     LINK=$FC
1447     fi
1448 edhill 1.39 if test "x$MAKE" = x ; then
1449     MAKE="make"
1450     fi
1451 edhill 1.63 if test "x$CPP" = x ; then
1452     CPP=cpp
1453     fi
1454     #EH3 === UGLY ===
1455 edhill 1.76 # The following is an ugly little hack to check for $CPP in /lib/ and
1456     # it should eventually be replaced with a more general function that
1457 edhill 1.63 # searches a combo of the user's path and a list of "usual suspects"
1458     # to find the correct location for binaries such as $CPP.
1459     for i in " " "/lib/" ; do
1460     echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
1461     done
1462     #EH3 === UGLY ===
1463 edhill 1.13 echo "#define A a" | $CPP > test_cpp 2>&1
1464 edhill 1.11 RETVAL=$?
1465     if test "x$RETVAL" != x0 ; then
1466 edhill 1.8 cat <<EOF 1>&2
1467    
1468 edhill 1.11 Error: C pre-processor "$CPP" failed the test case: please specify using:
1469    
1470 edhill 1.8 1) within the options file ("CPP=...") as specified by "-of=OPTFILE"
1471 edhill 1.12 2) the "./genmake_local" file
1472 edhill 1.30 3) with the CPP environment variable
1473 edhill 1.11
1474 edhill 1.8 EOF
1475     exit 1
1476 edhill 1.11 else
1477     rm -f test_cpp
1478 edhill 1.8 fi
1479 edhill 1.84 look_for_makedepend
1480 edhill 1.35 if test "x$LN" = x ; then
1481     LN="ln -s"
1482     fi
1483     echo "test" > genmake_test_ln
1484     $LN genmake_test_ln genmake_tlink
1485     RETVAL=$?
1486     if test "x$RETVAL" != x0 ; then
1487     cat <<EOF 1>&2
1488 edhill 1.29
1489 edhill 1.35 Error: The command "ln -s" failed -- please specify a working soft-link
1490     command in the optfile.
1491    
1492     EOF
1493     exit 1
1494     fi
1495 edhill 1.131 test -L genmake_tlink > /dev/null 2>&1
1496     RETVAL=$?
1497     if test "x$RETVAL" = x0 ; then
1498     HAVE_TEST_L=t
1499     fi
1500 edhill 1.35 rm -f genmake_test_ln genmake_tlink
1501 edhill 1.77
1502     # Check for broken *.F/*.f handling and fix if possible
1503     check_for_broken_Ff
1504 edhill 1.29
1505 adcroft 1.67 if test ! "x$MPI" = x ; then
1506     echo " Turning on MPI cpp macros"
1507 adcroft 1.68 DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1508 adcroft 1.67 fi
1509 edhill 1.39
1510 ce107 1.126 if test ! "x$TS" = x ; then
1511     echo " Turning on timing per timestep"
1512 ce107 1.139 if test ! "x$FOOLAD" = x ; then
1513     DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP"
1514     else
1515     DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1516     fi
1517     fi
1518     if test ! "x$PAPIS" = x ; then
1519     echo " Turning on PAPI flop summary per timestep"
1520     echo " Please make sure PAPIINC, PAPILIB are defined"
1521     if test ! "x$FOOLAD" = x ; then
1522     DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP"
1523     else
1524     DEFINES="$DEFINES -DUSE_PAPI_FLOPS"
1525     fi
1526     INCLUDES="$INCLUDES $PAPIINC"
1527     LIBS="$LIBS $PAPILIB"
1528     fi
1529     if test ! "x$PAPI" = x ; then
1530     if test ! "x$PAPIS" = x ; then
1531     echo " PAPI performance analysis and flop summary per timestep cannot co-exist!"
1532     echo " Sticking with PAPI flop summary per timestep!"
1533     else
1534     echo " Turning on performance analysis with PAPI"
1535     echo " Please make sure PAPIINC, PAPILIB are defined"
1536     DEFINES="$DEFINES -DUSE_PAPI"
1537     INCLUDES="$INCLUDES $PAPIINC"
1538     LIBS="$LIBS $PAPILIB"
1539     fi
1540     fi
1541     if test ! "x$HPMT" = x ; then
1542     if test ! "x$PAPI" = x ; then
1543     echo " PAPI and the HPM Toolkit cannot co-exist!"
1544     echo " Sticking with PAPI!"
1545     else
1546     echo " Turning on performance analysis with the HPM Toolkit"
1547     echo " Please make sure HPMTINC, HPMTLIB are defined"
1548     DEFINES="$DEFINES -DUSE_LIBHPM"
1549     INCLUDES="$INCLUDES $HPMTINC"
1550     LIBS="$LIBS $HPMTLIB"
1551     fi
1552     fi
1553     if test ! "x$GSL" = x ; then
1554     echo " Turning on use of GSL to control floating point calculations"
1555     echo " Please make sure GSLINC, GSLLIB are defined"
1556     DEFINES="$DEFINES -DUSE_GSL_IEEE"
1557     INCLUDES="$INCLUDES $GSLINC"
1558     LIBS="$LIBS $GSLLIB"
1559 ce107 1.126 fi
1560    
1561 edhill 1.29 printf "\n=== Checking system libraries ===\n"
1562 edhill 1.71 printf " Do we have the system() command using $FC... "
1563 edhill 1.118 cat > genmake_tcomp.$FS <<EOF
1564 edhill 1.29 program hello
1565     call system('echo hi')
1566     end
1567     EOF
1568 edhill 1.134 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1569 edhill 1.29 RETVAL=$?
1570     if test "x$RETVAL" = x0 ; then
1571     HAVE_SYSTEM=t
1572     DEFINES="$DEFINES -DHAVE_SYSTEM"
1573     echo "yes"
1574     else
1575     HAVE_SYSTEM=
1576     echo "no"
1577     fi
1578     rm -f genmake_tcomp*
1579    
1580 edhill 1.71 printf " Do we have the fdate() command using $FC... "
1581 edhill 1.118 cat > genmake_tcomp.$FS <<EOF
1582 edhill 1.29 program hello
1583 edhill 1.129 CHARACTER*(128) string
1584 edhill 1.29 string = ' '
1585     call fdate( string )
1586     print *, string
1587     end
1588     EOF
1589 edhill 1.134 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1590 edhill 1.29 RETVAL=$?
1591     if test "x$RETVAL" = x0 ; then
1592     HAVE_FDATE=t
1593     DEFINES="$DEFINES -DHAVE_FDATE"
1594     echo "yes"
1595     else
1596     HAVE_FDATE=
1597     echo "no"
1598     fi
1599     rm -f genmake_tcomp*
1600    
1601 cnh 1.81 printf " Do we have the etime() command using $FC... "
1602 edhill 1.118 cat > genmake_tcomp.$FS <<EOF
1603 cnh 1.81 program hello
1604 cnh 1.82 REAL*4 ACTUAL, TARRAY(2)
1605     EXTERNAL ETIME
1606     REAL*4 ETIME
1607     actual = etime( tarray )
1608 cnh 1.81 print *, tarray
1609     end
1610     EOF
1611 edhill 1.134 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1612 cnh 1.81 RETVAL=$?
1613     if test "x$RETVAL" = x0 ; then
1614     HAVE_ETIME=t
1615     DEFINES="$DEFINES -DHAVE_ETIME"
1616     echo "yes"
1617     else
1618     HAVE_ETIME=
1619     echo "no"
1620     fi
1621     rm -f genmake_tcomp*
1622    
1623 edhill 1.71 printf " Can we call simple C routines (here, \"cloc()\") using $FC... "
1624 edhill 1.39 check_HAVE_CLOC
1625     if test "x$HAVE_CLOC" != x ; then
1626     echo "yes"
1627     else
1628     echo "no"
1629 edhill 1.141 if test "x$EMBED_SRC" = xt ; then
1630     echo " WARNING: you requested file embedding but it has"
1631     echo " been disabled since C code cannot be called"
1632     EMBED_SRC=
1633     fi
1634 edhill 1.29 fi
1635 edhill 1.39 rm -f genmake_t*
1636 edhill 1.29
1637 edhill 1.130 printf " Can we unlimit the stack size using $FC... "
1638     check_HAVE_SETRLSTK
1639     if test "x$HAVE_SETRLSTK" != x ; then
1640     echo "yes"
1641     else
1642     echo "no"
1643     fi
1644     rm -f genmake_t*
1645    
1646 edhill 1.137 printf " Can we register a signal handler using $FC... "
1647     check_HAVE_SIGREG
1648     if test "x$HAVE_SIGREG" != x ; then
1649     echo "yes"
1650     else
1651     echo "no"
1652     fi
1653     rm -f genmake_t*
1654    
1655 edhill 1.108 printf " Can we use stat() through C calls... "
1656     check_HAVE_STAT
1657     if test "x$HAVE_STAT" != x ; then
1658     echo "yes"
1659     else
1660     echo "no"
1661     fi
1662     rm -f genmake_t*
1663    
1664 edhill 1.71 printf " Can we create NetCDF-enabled binaries... "
1665 edhill 1.60 check_netcdf_libs
1666     if test "x$HAVE_NETCDF" != x ; then
1667     echo "yes"
1668     else
1669     echo "no"
1670     fi
1671 edhill 1.124 DEFINES="$DEFINES $IGNORE_TIME"
1672 edhill 1.8
1673 edhill 1.141 if test "x$EMBED_SRC" = xt ; then
1674     build_embed_encode
1675     fi
1676     if test "x$EMBED_SRC" = xt ; then
1677     ENABLE="$ENABLE embed_files"
1678     fi
1679    
1680    
1681 edhill 1.2 printf "\n=== Setting defaults ===\n"
1682 edhill 1.71 printf " Adding MODS directories: "
1683 edhill 1.1 for d in $MODS ; do
1684     if test ! -d $d ; then
1685 edhill 1.2 echo
1686     echo "Error: MODS directory \"$d\" not found!"
1687 edhill 1.1 exit 1
1688     else
1689 edhill 1.71 printf " $d"
1690 edhill 1.1 SOURCEDIRS="$SOURCEDIRS $d"
1691     INCLUDEDIRS="$INCLUDEDIRS $d"
1692     fi
1693     done
1694     echo
1695    
1696     if test "x${PLATFORM}" = x ; then
1697     PLATFORM=$p_PLATFORM
1698     fi
1699    
1700     if test "x${EXEDIR}" = x ; then
1701 edhill 1.112 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1702 edhill 1.87 if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1703 edhill 1.1 EXEDIR=../exe
1704     else
1705     EXEDIR=.
1706     fi
1707     fi
1708     if test ! -d ${EXEDIR} ; then
1709     echo "Error: the specified EXEDIR (\"$EXEDIR\") does not exist!"
1710     exit 1
1711     fi
1712    
1713     if test "x${TOOLSDIR}" = x ; then
1714     TOOLSDIR="$ROOTDIR/tools"
1715     fi
1716     if test ! -d ${TOOLSDIR} ; then
1717 cnh 1.65 echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1718 edhill 1.1 exit 1
1719     fi
1720 edhill 1.11 if test "x$S64" = x ; then
1721 edhill 1.104 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1722     RETVAL=$?
1723     if test "x${RETVAL}" = x0 ; then
1724     S64='$(TOOLSDIR)/set64bitConst.sh'
1725     else
1726     echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1727     RETVAL=$?
1728     if test "x${RETVAL}" = x0 ; then
1729     S64='$(TOOLSDIR)/set64bitConst.csh'
1730     else
1731     cat <<EOF
1732    
1733     ERROR: neither of the two default scripts:
1734    
1735     ${TOOLSDIR}/set64bitConst.sh
1736     ${TOOLSDIR}/set64bitConst.csh
1737    
1738     are working so please check paths or specify (with \$S64) a
1739     working version of this script.
1740    
1741     EOF
1742     exit 1
1743     fi
1744     fi
1745 edhill 1.11 fi
1746 adcroft 1.44 THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1747 edhill 1.1
1748     EXECUTABLE=${EXECUTABLE:-mitgcmuv}
1749    
1750     # We have a special set of source files in eesupp/src which are
1751     # generated from some template source files. We'll make them first so
1752     # they appear as regular source code
1753     if test -r $ROOTDIR"/eesupp/src/Makefile" ; then
1754     echo " Making source files in eesupp from templates"
1755 edhill 1.36 ( cd $ROOTDIR"/eesupp/src/" && $MAKE ) > make_eesupp.errors 2>&1
1756 edhill 1.1 RETVAL=$?
1757 edhill 1.2 if test "x${RETVAL}" = x0 ; then
1758 edhill 1.1 rm -f make_eesupp.errors
1759     else
1760     echo "Error: problem encountered while building source files in eesupp:"
1761 edhill 1.62 cat make_eesupp.errors 1>&2
1762 edhill 1.1 exit 1
1763 afe 1.58 fi
1764     fi
1765    
1766     #same for exch2
1767     if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then
1768     echo " Making source files in exch2 from templates"
1769     ( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1
1770     RETVAL=$?
1771     if test "x${RETVAL}" = x0 ; then
1772     rm -f make_exch2.errors
1773     else
1774 edhill 1.59 echo "Error: problem encountered while building source files in exch2:"
1775 edhill 1.62 cat make_exch2.errors 1>&2
1776 afe 1.58 exit 1
1777 edhill 1.1 fi
1778     fi
1779    
1780 edhill 1.2 printf "\n=== Determining package settings ===\n"
1781 edhill 1.1 if test "x${PDEPEND}" = x ; then
1782     tmp=$ROOTDIR"/pkg/pkg_depend"
1783     if test -r $tmp ; then
1784     PDEPEND=$tmp
1785     else
1786     echo "Warning: No package dependency information was specified."
1787     echo " Please check that ROOTDIR/pkg/pkg_depend exists."
1788     fi
1789     else
1790     if test ! -r ${PDEPEND} ; then
1791     echo "Error: can't read package dependency info from PDEPEND=\"$PDEPEND\""
1792     exit 1
1793     fi
1794     fi
1795     echo " getting package dependency info from $PDEPEND"
1796     # Strip the comments and then convert the dependency file into
1797     # two arrays: PNAME, DNAME
1798     cat $PDEPEND | sed -e 's/#.*$//g' \
1799 edhill 1.15 | $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \
1800 edhill 1.1 > ./.pd_tmp
1801     RETVAL=$?
1802     if test ! "x${RETVAL}" = x0 ; then
1803     echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\""
1804     exit 1
1805     fi
1806 edhill 1.34 . ./.pd_tmp
1807 edhill 1.1 rm -f ./.pd_tmp
1808    
1809 edhill 1.12 # Search for default packages. Note that a "$ROOTDIR/pkg/pkg_groups"
1810     # file should eventually be added so that, for convenience, one can
1811     # specify groups of packages using names like "ocean" and "atmosphere".
1812 edhill 1.41 echo " checking default package list: "
1813 edhill 1.1 if test "x${PDEFAULT}" = x ; then
1814 edhill 1.12 for i in "." $MODS ; do
1815     if test -r $i"/packages.conf" ; then
1816     PDEFAULT=$i"/packages.conf"
1817     break
1818     fi
1819     done
1820     fi
1821     if test "x${PDEFAULT}" = x ; then
1822 edhill 1.1 PDEFAULT="$ROOTDIR/pkg/pkg_default"
1823     fi
1824     if test "x${PDEFAULT}" = xNONE ; then
1825 edhill 1.41 echo " default packages file disabled"
1826 edhill 1.1 else
1827     if test ! -r $PDEFAULT ; then
1828     echo "Warning: can't read default packages from PDEFAULT=\"$PDEFAULT\""
1829     else
1830 edhill 1.41 echo " using PDEFAULT=\"$PDEFAULT\""
1831 edhill 1.1 # Strip the comments and add all the names
1832 edhill 1.15 def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1833 edhill 1.1 RETVAL=$?
1834     if test "x${RETVAL}" != x0 ; then
1835 edhill 1.71 printf "Error: can't parse default package list "
1836 edhill 1.1 echo "-- please check PDEFAULT=\"$PDEFAULT\""
1837     exit 1
1838     fi
1839     for i in $def ; do
1840     PACKAGES="$PACKAGES $i"
1841     done
1842 edhill 1.12 echo " before group expansion packages are: $PACKAGES"
1843 edhill 1.87 RET=1
1844     while test $RET = 1 ; do expand_pkg_groups; RET=$?; done
1845 edhill 1.12 echo " after group expansion packages are: $PACKAGES"
1846 edhill 1.1 fi
1847     fi
1848    
1849     echo " applying DISABLE settings"
1850 adcroft 1.74 for i in $PACKAGES ; do
1851     echo $i >> ./.tmp_pack
1852     done
1853     for i in `grep "-" ./.tmp_pack` ; do
1854     j=`echo $i | sed 's/[-]//'`
1855     DISABLE="$DISABLE $j"
1856     done
1857 edhill 1.1 pack=
1858     for p in $PACKAGES ; do
1859     addit="t"
1860     for d in $DISABLE ; do
1861     if test "x$p" = "x$d" ; then
1862     addit="f"
1863     fi
1864     done
1865     if test "x$addit" = xt ; then
1866     pack="$pack $p"
1867     fi
1868     done
1869     PACKAGES="$pack"
1870     echo " applying ENABLE settings"
1871 edhill 1.12 echo "" > ./.tmp_pack
1872 edhill 1.1 PACKAGES="$PACKAGES $ENABLE"
1873 adcroft 1.74 # Test if each explicitly referenced package exists
1874 edhill 1.1 for i in $PACKAGES ; do
1875 adcroft 1.74 j=`echo $i | sed 's/[-+]//'`
1876     if test ! -d "$ROOTDIR/pkg/$j" ; then
1877 edhill 1.1 echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\""
1878 adcroft 1.74 exit 1
1879 edhill 1.1 fi
1880     echo $i >> ./.tmp_pack
1881     done
1882     PACKAGES=
1883 adcroft 1.74 for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do
1884 edhill 1.1 PACKAGES="$PACKAGES $i"
1885     done
1886 adcroft 1.74 rm -f ./.tmp_pack
1887 edhill 1.1 echo " packages are: $PACKAGES"
1888    
1889 edhill 1.100 # Check availability of NetCDF and then either build the MNC template
1890     # files or delete mnc from the list of available packages.
1891     echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1892     RETVAL=$?
1893     if test "x$RETVAL" = x0 ; then
1894     if test "x$HAVE_NETCDF" != xt ; then
1895     cat <<EOF
1896    
1897     *********************************************************************
1898     WARNING: the "mnc" package was enabled but tests failed to compile
1899     NetCDF applications. Please check that:
1900    
1901     1) NetCDF is correctly installed for this compiler and
1902     2) the LIBS variable (within the "optfile") specifies the correct
1903     NetCDF library to link against.
1904    
1905     Due to this failure, the "mnc" package is now DISABLED.
1906     *********************************************************************
1907    
1908     EOF
1909     PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
1910     DISABLE="$DISABLE mnc"
1911     else
1912 edhill 1.110 ( cd $ROOTDIR"/pkg/mnc" && $MAKE testclean && $MAKE templates ) > make_mnc.errors 2>&1
1913 edhill 1.100 RETVAL=$?
1914     if test "x${RETVAL}" = x0 ; then
1915     rm -f make_mnc.errors
1916     else
1917     echo "Error: problem encountered while building source files in pkg/mnc:"
1918     cat make_mnc.errors 1>&2
1919     exit 1
1920     fi
1921     fi
1922     fi
1923    
1924 edhill 1.1 echo " applying package dependency rules"
1925     ck=
1926     while test "x$ck" != xtt ; do
1927     i=0
1928 edhill 1.2 # rtot=${#PNAME[@]}
1929     rtot=$nname
1930 edhill 1.1 while test $i -lt $rtot ; do
1931    
1932     # Is $pname in the current $PACKAGES list?
1933 edhill 1.2 # pname=${PNAME[$i]}
1934     tmp="pname=\"\$PNAME_$i\""
1935     eval $tmp
1936 edhill 1.1 pin="f"
1937     for p in $PACKAGES ; do
1938     if test "x$p" = "x$pname" ; then
1939     pin="t"
1940     fi
1941     done
1942    
1943     # Is the DNAME entry a (+) or (-) rule ?
1944 edhill 1.2 tmp="dname=\"\$DNAME_$i\""
1945     eval $tmp
1946 edhill 1.1 plus="-"
1947 edhill 1.2 echo $dname | grep '^+' > /dev/null 2>&1
1948 edhill 1.1 RETVAL=$?
1949     if test "x$RETVAL" = x0 ; then
1950     plus="+"
1951     fi
1952    
1953     # Is $dname in the current $PACKAGES list?
1954 edhill 1.2 dname=`echo $dname | sed -e 's/^[+-]//'`
1955 edhill 1.1 din="f"
1956     for p in $PACKAGES ; do
1957     if test "x$p" = "x$dname" ; then
1958     din="t"
1959     fi
1960     done
1961    
1962     # Do we need to add $dname according to the dependency rules?
1963     if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then
1964     in_dis="f"
1965     for dis in $DISABLE ; do
1966     if test "x$dis" = "x$dname" ; then
1967     in_dis="t"
1968     fi
1969     done
1970     if test "x$in_dis" = xt ; then
1971     echo "Error: can't satisfy package dependencies:"
1972     echo " \"$dname\" is required by the dependency rules"
1973     echo " but is disallowed by the DISABLE settings"
1974     exit 1
1975     else
1976     PACKAGES="$PACKAGES $dname"
1977     ck=
1978     fi
1979     fi
1980    
1981     # Do we need to get rid of $dname according to the dependency rules?
1982     if test "x$pin" = xt -a "x$plus" = "x-" -a "x$din" = xt; then
1983     echo "Error: can't satisfy package dependencies:"
1984     echo " \"$pname\" was requested but is disallowed by"
1985     echo " the dependency rules for \"$dname\""
1986     exit 1
1987     fi
1988 edhill 1.87 i=`echo "$i + 1" | bc -l`
1989     #i=$(( $i + 1 ))
1990 edhill 1.1 done
1991     ck=$ck"t"
1992     done
1993     echo " packages are: $PACKAGES"
1994     for i in $PACKAGES ; do
1995     adr="$ROOTDIR/pkg/$i"
1996     if test -d $adr ; then
1997     SOURCEDIRS="$SOURCEDIRS $adr"
1998     INCLUDEDIRS="$INCLUDEDIRS $adr"
1999 edhill 1.14 if test "x$i" = xautodiff ; then
2000     AUTODIFF_PKG_USED=t
2001     fi
2002 edhill 1.1 else
2003     echo "Error: the directory \"$adr\" for package $i doesn't exist"
2004     exit 1
2005     fi
2006     done
2007    
2008 edhill 1.12 # Create a list of #define and #undef to enable/disable packages
2009     PACKAGES_DOT_H=PACKAGES_CONFIG.h
2010 edhill 1.1 # The following UGLY HACK sets multiple "#undef"s and it needs to go
2011     # away. On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h
2012     # file would eventually be split up so that all package-related #define
2013     # statements could be separated and handled only by genmake.
2014     names=`ls -1 "$ROOTDIR/pkg"`
2015     all_pack=
2016 adcroft 1.44 DISABLED_PACKAGES=
2017 edhill 1.1 for n in $names ; do
2018     if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then
2019     has_pack="f"
2020     for pack in $PACKAGES ; do
2021     if test "x$pack" = "x$n" ; then
2022     has_pack="t"
2023     break
2024     fi
2025     done
2026     if test "x$has_pack" = xf ; then
2027 edhill 1.116 undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2028 adcroft 1.44 DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
2029 edhill 1.1 fi
2030     fi
2031     done
2032 adcroft 1.44 ENABLED_PACKAGES=
2033 edhill 1.1 for i in $PACKAGES ; do
2034 edhill 1.116 def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2035 adcroft 1.44 ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
2036 edhill 1.12 #eh3 DEFINES="$DEFINES -D$def"
2037 edhill 1.1
2038     #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2039     case $i in
2040     aim_v23)
2041 adcroft 1.46 ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
2042 jmc 1.55 echo "Warning: ALLOW_AIM is set to enable aim_v23."
2043 edhill 1.1 ;;
2044     esac
2045     #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2046    
2047     done
2048    
2049     echo " Adding STANDARDDIRS"
2050     BUILDDIR=${BUILDDIR:-.}
2051 edhill 1.57 if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
2052 edhill 1.12 STANDARDDIRS="eesupp model"
2053     fi
2054 edhill 1.57 if test "x$STANDARDDIRS" != x ; then
2055     for d in $STANDARDDIRS ; do
2056     adr="$ROOTDIR/$d/src"
2057     if test ! -d $adr ; then
2058     echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2059     echo " is correct and that you correctly specified the STANDARDDIRS option"
2060     exit 1
2061     else
2062     SOURCEDIRS="$SOURCEDIRS $adr"
2063     fi
2064     adr="$ROOTDIR/$d/inc"
2065     if test ! -d $adr ; then
2066     echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2067     echo " is correct and that you correctly specified the STANDARDDIRS option"
2068     exit 1
2069     else
2070     INCLUDEDIRS="$INCLUDEDIRS $adr"
2071     fi
2072     done
2073     fi
2074 edhill 1.1
2075 adcroft 1.52 echo " Searching for *OPTIONS.h files in order to warn about the presence"
2076     echo " of \"#define \"-type statements that are no longer allowed:"
2077 edhill 1.12 CPP_OPTIONS=
2078 adcroft 1.52 CPP_EEOPTIONS=
2079 edhill 1.12 spaths=". $INCLUDEDIRS"
2080 adcroft 1.52 names=`ls -1 "$ROOTDIR/pkg"`
2081 edhill 1.12 for i in $spaths ; do
2082     try="$i/CPP_OPTIONS.h"
2083 edhill 1.54 if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
2084 edhill 1.12 echo " found CPP_OPTIONS=\"$try\""
2085     CPP_OPTIONS="$try"
2086 adcroft 1.52 # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
2087     for n in $names ; do
2088     test_for_package_in_cpp_options $CPP_OPTIONS $n
2089     done
2090     fi
2091     try="$i/CPP_EEOPTIONS.h"
2092 edhill 1.54 if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
2093 adcroft 1.52 echo " found CPP_EEOPTIONS=\"$try\""
2094     # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
2095     #**** not yet enabled ****
2096     # test_for_mpi_in_cpp_eeoptions $try
2097     #**** not yet enabled ****
2098     CPP_EEOPTIONS="$try"
2099 edhill 1.12 fi
2100     done
2101     if test "x$CPP_OPTIONS" = x ; then
2102     echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"
2103     exit 1
2104     fi
2105 edhill 1.1
2106 edhill 1.14 # Here, we build the list of files to be "run through" the adjoint
2107     # compiler.
2108     if test -f ./ad_files ; then
2109     rm -f ./ad_files
2110     fi
2111     echo " Creating the list of files for the adjoint compiler."
2112     for i in $SOURCEDIRS ; do
2113     list_files=`( cd $i && ls -1 *.list 2>/dev/null )`
2114     for j in $list_files ; do
2115     cat $i/$j >> ad_files
2116     done
2117     done
2118 edhill 1.121 if test ! "x"$FS = "x.f" ; then
2119 edhill 1.122 cat ad_files | sed -e "s/\.f/.$FS/g" > ad_files_f
2120 edhill 1.121 mv -f ad_files_f ad_files
2121     fi
2122 edhill 1.14
2123 edhill 1.2 echo
2124     echo "=== Creating the Makefile ==="
2125 edhill 1.1 echo " setting INCLUDES"
2126     for i in $INCLUDEDIRS ; do
2127 edhill 1.87 if test ! -d $i ; then
2128 edhill 1.1 echo "Warning: can't find INCLUDEDIRS=\"$i\""
2129     fi
2130     done
2131    
2132 ce107 1.139 if test ! "x$DIVA" = x ; then
2133 ce107 1.140 echo " Creating the pseudo-MPI include directory"
2134 ce107 1.139 INCLUDES="-I./mpi_headers $INCLUDES"
2135     rm -rf ./mpi_headers
2136     mkdir -p ./mpi_headers
2137    
2138     if test "x$MPIINCLUDEDIR" = x ; then
2139     if test "x$MPIHOME" = x ; then
2140     MPIHOME='/usr'
2141     fi
2142     MPIINCLUDEDIR='$MPIHOME/include'
2143     fi
2144    
2145     if test -r $MPIINCLUDEDIR/mpif.h ; then
2146     for i in $MPI_HEADER_FILES; do
2147     cp -p $MPIINCLUDEDIR/$i ./mpi_headers
2148     done
2149    
2150     perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h
2151     else
2152     echo " We cannot create a copy of mpif.h!"
2153     exit -1
2154     fi
2155     fi
2156    
2157 edhill 1.1 echo " Determining the list of source and include files"
2158     rm -rf .links.tmp
2159     mkdir .links.tmp
2160 edhill 1.142 touch .links.tmp/foo
2161     if test ! -r ".links.tmp/foo" ; then
2162     echo
2163     echo "ERROR : something is wrong with your directory permissions or"
2164     echo " your user file-creation mask (\"umask\") since creating a"
2165     echo " sub-dir, touch-ing a file within it, and then reading it is"
2166     echo " not working. Please try setting your umask to something"
2167     echo " sane such as:"
2168     echo
2169     echo " umask 0002"
2170     echo
2171     echo " and please verify that you have the proper permissions for"
2172     echo " creating sub-directories and then reading files created"
2173     echo " within them."
2174     echo
2175     exit 1
2176     fi
2177     rm -f .links.tmp/foo
2178 edhill 1.1 echo "# This section creates symbolic links" > srclinks.tmp
2179     echo "" >> srclinks.tmp
2180 edhill 1.71 printf 'SRCFILES = ' > srclist.inc
2181     printf 'CSRCFILES = ' > csrclist.inc
2182     printf 'F90SRCFILES = ' > f90srclist.inc
2183     printf 'HEADERFILES = ' > hlist.inc
2184     printf 'AD_FLOW_FILES = ' > ad_flow_files.inc
2185 adcroft 1.9 alldirs="$SOURCEDIRS $INCLUDEDIRS ."
2186 edhill 1.1 for d in $alldirs ; do
2187     deplist=
2188 edhill 1.14 sfiles=`( cd $d; echo *.[h,c,F] *.flow )`
2189 cnh 1.3 sfiles=`( echo $sfiles; cd $d; echo *.F90 )`
2190 edhill 1.1 for sf in $sfiles ; do
2191     if test ! -r ".links.tmp/$sf" ; then
2192     if test -f "$d/$sf" ; then
2193 edhill 1.131 ignore_f=f
2194 adcroft 1.44 case $d/$sf in
2195     ./$PACKAGES_DOT_H)
2196 edhill 1.141 ignore_f=t
2197 adcroft 1.44 ;;
2198     ./AD_CONFIG.h)
2199 edhill 1.141 ignore_f=t
2200 adcroft 1.44 ;;
2201     ./FC_NAMEMANGLE.h)
2202 edhill 1.141 ignore_f=t
2203 adcroft 1.44 ;;
2204 edhill 1.98 ./BUILD_INFO.h)
2205 edhill 1.141 ignore_f=t
2206     ;;
2207     ./EMBEDDED_FILES.h)
2208     ignore_f=t
2209 edhill 1.98 ;;
2210 adcroft 1.44 *)
2211 edhill 1.131 # For the local directory *ONLY*,
2212     # ignore all soft-links
2213     if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then
2214     ignore_f=t
2215     else
2216     touch .links.tmp/$sf
2217     deplist="$deplist $sf"
2218     fi
2219 adcroft 1.44 ;;
2220     esac
2221 edhill 1.131 if test "x$ignore_f" = xf ; then
2222     extn=`echo $sf | $AWK -F. '{print $NF}'`
2223     case $extn in
2224     F)
2225     echo " \\" >> srclist.inc
2226     printf " $sf" >> srclist.inc
2227     ;;
2228     F90)
2229     echo " \\" >> f90srclist.inc
2230     printf " $sf" >> f90srclist.inc
2231     ;;
2232     c)
2233     echo " \\" >> csrclist.inc
2234     printf " $sf" >> csrclist.inc
2235     ;;
2236     h)
2237     echo " \\" >> hlist.inc
2238     printf " $sf" >> hlist.inc
2239     ;;
2240     flow)
2241     echo " \\" >> ad_flow_files.inc
2242     printf " $sf" >> ad_flow_files.inc
2243     ;;
2244     esac
2245     fi
2246 edhill 1.1 fi
2247     fi
2248     done
2249     if test "x$deplist" != x ; then
2250 edhill 1.2 echo "" >> srclinks.tmp
2251     echo "# These files are linked from $d" >> srclinks.tmp
2252 edhill 1.1 echo "$deplist :" >> srclinks.tmp
2253 edhill 1.2 printf "\t\$(LN) %s/\$@ \$@\n" $d >> srclinks.tmp
2254 edhill 1.1 fi
2255     done
2256     rm -rf .links.tmp
2257     echo "" >> srclist.inc
2258     echo "" >> csrclist.inc
2259 cnh 1.3 echo "" >> f90srclist.inc
2260 edhill 1.1 echo "" >> hlist.inc
2261 edhill 1.14 echo "" >> ad_flow_files.inc
2262 edhill 1.1
2263 edhill 1.88 if test -f $MAKEFILE ; then
2264 edhill 1.1 mv -f $MAKEFILE "$MAKEFILE.bak"
2265     fi
2266     echo " Writing makefile: $MAKEFILE"
2267     echo "# Multithreaded + multi-processing makefile for:" > $MAKEFILE
2268     echo "# $MACHINE" >> $MAKEFILE
2269     echo "# This makefile was generated automatically on" >> $MAKEFILE
2270     echo "# $THISDATE" >> $MAKEFILE
2271     echo "# by the command:" >> $MAKEFILE
2272 edhill 1.73 echo "# $0 $G2ARGS" >> $MAKEFILE
2273 edhill 1.1 echo "# executed by:" >> $MAKEFILE
2274 edhill 1.97 echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
2275 edhill 1.21
2276     EXE_AD=$EXECUTABLE"_ad"
2277     EXE_FTL=$EXECUTABLE"_ftl"
2278     EXE_SVD=$EXECUTABLE"_svd"
2279    
2280 edhill 1.1 cat >>$MAKEFILE <<EOF
2281 edhill 1.53 #
2282     # OPTFILE="$OPTFILE"
2283 edhill 1.1 #
2284     # BUILDDIR : Directory where object files are written
2285     # SOURCEDIRS : Directories containing the source (.F) files
2286     # INCLUDEDIRS : Directories containing the header-source (.h) files
2287     # EXEDIR : Directory where executable that is generated is written
2288     # EXECUTABLE : Full path of executable binary
2289     #
2290     # CPP : C-preprocessor command
2291     # INCLUDES : Directories searched for header files
2292     # DEFINES : Macro definitions for CPP
2293     # MAKEDEPEND : Dependency generator
2294     # KPP : Special preprocessor command (specific to platform)
2295     # KFLAGS : Flags for KPP
2296     # FC : Fortran compiler command
2297     # FFLAGS : Configuration/debugging options for FC
2298     # FOPTIM : Optimization options for FC
2299     # LINK : Command for link editor program
2300     # LIBS : Library flags /or/ additional optimization/debugging flags
2301    
2302     ROOTDIR = ${ROOTDIR}
2303     BUILDDIR = ${BUILDDIR}
2304     SOURCEDIRS = ${SOURCEDIRS}
2305     INCLUDEDIRS = ${INCLUDEDIRS}
2306     EXEDIR = ${EXEDIR}
2307     EXECUTABLE = \$(EXEDIR)/${EXECUTABLE}
2308     TOOLSDIR = ${TOOLSDIR}
2309    
2310 edhill 1.14 #eh3 new defines for the adjoint work
2311     AUTODIFF = ${ROOTDIR}/pkg/autodiff
2312 edhill 1.21 EXE_AD = ${EXE_AD}
2313     EXE_FTL = ${EXE_FTL}
2314     EXE_SVD = ${EXE_SVD}
2315 edhill 1.14
2316 adcroft 1.44 ENABLED_PACKAGES = ${ENABLED_PACKAGES}
2317     DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2318    
2319 adcroft 1.52 # These files are created by Makefile
2320 edhill 1.97 SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
2321 edhill 1.141 EOF
2322 adcroft 1.52
2323 edhill 1.141 if test "x$EMBED_SRC" = xt ; then
2324     echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE
2325     else
2326     echo "EMBEDDED_FILES = " >>$MAKEFILE
2327     fi
2328 edhill 1.1
2329 edhill 1.141 # Note: figure out some way to add Hyades JAM libraries here
2330 edhill 1.1 cat >>$MAKEFILE <<EOF
2331     # Unix ln (link)
2332     LN = ${LN}
2333     # C preprocessor
2334     CPP = cat \$< | ${S64} | ${CPP}
2335     # Dependency generator
2336     MAKEDEPEND = ${MAKEDEPEND}
2337     # Special preprocessor (KAP on DECs, FPP on Crays)
2338     KPP = ${KPP}
2339     # Fortran compiler
2340 edhill 1.94 FC = ${FC}
2341 cnh 1.3 # Fortran compiler
2342     F90C = ${F90C}
2343 edhill 1.92 # C compiler
2344     CC = ${CC}
2345 edhill 1.1 # Link editor
2346 edhill 1.70 LINK = ${LINK} ${LDADD}
2347 edhill 1.1
2348     # Defines for CPP
2349     DEFINES = ${DEFINES}
2350     # Includes for CPP
2351     INCLUDES = ${INCLUDES}
2352     # Flags for KPP
2353     KFLAGS1 = ${KFLAGS1}
2354     KFLAGS2 = ${KFLAGS2}
2355     # Optim./debug for FC
2356     FFLAGS = ${FFLAGS}
2357     FOPTIM = ${FOPTIM}
2358 cnh 1.3 # Optim./debug for FC
2359     F90FLAGS = ${F90FLAGS}
2360     F90OPTIM = ${F90OPTIM}
2361 edhill 1.1 # Flags for CC
2362     CFLAGS = ${CFLAGS}
2363     # Files that should not be optimized
2364     NOOPTFILES = ${NOOPTFILES}
2365     NOOPTFLAGS = ${NOOPTFLAGS}
2366     # Flags and libraries needed for linking
2367 edhill 1.107 LIBS = ${LIBS}
2368 cnh 1.3 # Name of the Mekfile
2369     MAKEFILE=${MAKEFILE}
2370 edhill 1.1
2371     EOF
2372    
2373 edhill 1.14 cat srclist.inc >> $MAKEFILE
2374     cat csrclist.inc >> $MAKEFILE
2375     cat f90srclist.inc >> $MAKEFILE
2376     cat hlist.inc >> $MAKEFILE
2377     cat ad_flow_files.inc >> $MAKEFILE
2378 edhill 1.75 echo >> $MAKEFILE
2379 edhill 1.76 echo 'F77FILES = $(SRCFILES:.F=.'$FS')' >> $MAKEFILE
2380 heimbach 1.127 echo 'F90FILES = $(F90SRCFILES:.F90=.'$FS90')' >> $MAKEFILE
2381 edhill 1.76 echo 'OBJFILES = $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE
2382 edhill 1.75 echo >> $MAKEFILE
2383     echo '.SUFFIXES:' >> $MAKEFILE
2384 adcroft 1.83 echo '.SUFFIXES: .o .'$FS' .p .F .c .'$FS90' .F90' >> $MAKEFILE
2385 cnh 1.3 rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc
2386 edhill 1.14 rm -f ad_flow_files.inc
2387 edhill 1.1
2388     cat >>$MAKEFILE <<EOF
2389    
2390     all: \$(EXECUTABLE)
2391 edhill 1.141 \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES) \$(EMBEDDED_FILES)
2392 adcroft 1.44 @echo Creating \$@ ...
2393 edhill 1.1 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2394     depend:
2395     @make links
2396 edhill 1.76 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(SRCFILES)
2397 adcroft 1.44 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2398 edhill 1.72 -rm -f makedepend.out
2399 edhill 1.1
2400 cnh 1.132 lib: libmitgcmuv.a
2401    
2402     libmitgcmuv.a: \$(OBJFILES)
2403     ar rcv libmitgcmuv.a \$(OBJFILES)
2404    
2405 adcroft 1.52 links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
2406 edhill 1.1
2407 cnh 1.3 small_f: \$(F77FILES) \$(F90FILES)
2408 edhill 1.1
2409     output.txt: \$(EXECUTABLE)
2410     @printf 'running ... '
2411     @\$(EXECUTABLE) > \$@
2412    
2413     clean:
2414 edhill 1.76 -rm -rf *.o *.$FS *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
2415 edhill 1.1 Clean:
2416     @make clean
2417     @make cleanlinks
2418 adcroft 1.52 -rm -f \$(SPECIAL_FILES)
2419 edhill 1.144 -rm -f genmake* make.log run.log *.bak
2420 edhill 1.1 CLEAN:
2421     @make Clean
2422     -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2423     -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2424     -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2425 edhill 1.144 -rm -f \$(EXECUTABLE) *.txt STD* *diagnostics.log datetime
2426     -rm -rf mnc_test_*
2427 edhill 1.1
2428 edhill 1.18 #eh3 Makefile: makefile
2429 edhill 1.1 makefile:
2430 edhill 1.73 $THIS_SCRIPT $G2ARGS
2431 edhill 1.1 cleanlinks:
2432     -find . -type l -exec rm {} \;
2433    
2434 edhill 1.97 # Special targets (SPECIAL_FILES) which are create by make
2435 adcroft 1.44 ${PACKAGES_DOT_H}:
2436     @echo Creating \$@ ...
2437 edhill 1.71 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
2438 adcroft 1.44 AD_CONFIG.h:
2439     @echo Creating \$@ ...
2440 edhill 1.71 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
2441 adcroft 1.52 FC_NAMEMANGLE.h:
2442     @echo Creating \$@ ...
2443     echo "$FC_NAMEMANGLE" > \$@
2444 adcroft 1.44
2445 edhill 1.97 BUILD_INFO.h:
2446     @echo Creating \$@ ...
2447     EOF
2448    
2449     test ! "x$THISVER" = x && echo " -echo \"#define THISVER '$THISVER'\" > \$@" >> $MAKEFILE
2450     test ! "x$THISUSER" = x && echo " -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2451     test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2452     test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2453    
2454 edhill 1.141 if test "x$EMBED_SRC" = xt ; then
2455     cat >>$MAKEFILE <<EOF
2456    
2457     decode_files.o : EMBEDDED_FILES.h
2458    
2459     ## \$(F77FILES)
2460     all_fF.tar.gz : \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2461     @echo Creating \$@ ...
2462     -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2463     -rm -f all_fF.tar.gz
2464     -gzip all_fF.tar
2465    
2466     EMBEDDED_FILES.h : all_fF.tar.gz
2467     @echo Creating \$@ ...
2468     -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
2469    
2470     EOF
2471     fi
2472    
2473 edhill 1.97 cat >>$MAKEFILE <<EOF
2474    
2475 edhill 1.76 # The normal chain of rules is ( .F - .$FS - .o )
2476    
2477 edhill 1.101 ## This nullifies any default implicit rules concerning these two file types:
2478     ## %.o : %.F
2479 edhill 1.76
2480     .F.$FS:
2481 edhill 1.1 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2482 edhill 1.76 .$FS.o:
2483 edhill 1.1 \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2484 edhill 1.76 .F90.$FS90:
2485 cnh 1.3 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2486 edhill 1.76 .$FS90.o:
2487 cnh 1.3 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2488 edhill 1.1 .c.o:
2489 ce107 1.139 \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
2490 edhill 1.1
2491 edhill 1.76 # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2492     .F.p:
2493 edhill 1.1 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2494 edhill 1.76 .p.$FS:
2495 edhill 1.1 \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
2496 edhill 1.14
2497     #=========================================
2498     #=== Automatic Differentiation Rules ===
2499    
2500     TAMC = ${TAMC}
2501     TAF = ${TAF}
2502    
2503 edhill 1.17 TAF_EXTRA = ${TAF_EXTRA}
2504     TAMC_EXTRA = ${TAMC_EXTRA}
2505    
2506 edhill 1.14 EOF
2507    
2508     ad_vars="AD_TAMC_FLAGS AD_TAF_FLAGS"
2509     ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF_FLAGS"
2510     ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
2511     for i in $ad_vars ; do
2512     name=$i
2513     t1="t2=\$"`echo $i`
2514     eval $t1
2515     printf "%-20s = " $name >> $MAKEFILE
2516     echo $t2 >> $MAKEFILE
2517     done
2518    
2519     echo " Add the source list for AD code generation"
2520     echo >> $MAKEFILE
2521 edhill 1.71 printf "AD_FILES = " >> $MAKEFILE
2522 edhill 1.14 AD_FILES=`cat ad_files`
2523     for i in $AD_FILES ; do
2524     echo " \\" >> $MAKEFILE
2525 edhill 1.71 printf " $i" >> $MAKEFILE
2526 edhill 1.14 done
2527     echo >> $MAKEFILE
2528 edhill 1.21 rm -f ad_files
2529 edhill 1.14
2530     cat >>$MAKEFILE <<EOF
2531    
2532 edhill 1.16 # ... AD ...
2533 edhill 1.23 adall: ad_taf
2534 edhill 1.121 adtaf: ad_taf_output.$FS
2535     adtamc: ad_tamc_output.$FS
2536 edhill 1.21
2537 edhill 1.121 ad_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2538 edhill 1.71 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2539 edhill 1.23 cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2540 adcroft 1.44 -rm -f ad_config.template
2541 edhill 1.22 @make \$(F77FILES)
2542     @make \$(AD_FLOW_FILES)
2543 edhill 1.121 cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.$FS
2544 edhill 1.22
2545 edhill 1.121 ad_taf_output.$FS: ad_input_code.$FS
2546     \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2547     cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2548 heimbach 1.37
2549     adtafonly:
2550 edhill 1.121 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2551     cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2552 edhill 1.14
2553     ad_taf: ad_taf_output.o \$(OBJFILES)
2554 edhill 1.21 \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2555 edhill 1.14
2556 edhill 1.121 ad_tamc_output.$FS: ad_input_code.$FS
2557     \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
2558     cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
2559 edhill 1.14
2560     ad_tamc: ad_tamc_output.o \$(OBJFILES)
2561 edhill 1.21 \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
2562 edhill 1.14
2563 heimbach 1.105 adonlyfwd:
2564 edhill 1.106 patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
2565 heimbach 1.105
2566     adtrick:
2567 edhill 1.106 patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
2568 edhill 1.14
2569 edhill 1.19 # ... FTL ...
2570 edhill 1.23 ftlall: ftl_taf
2571 edhill 1.121 ftltaf: ftl_taf_output.$FS
2572     ftltamc: ftl_tamc_output.$FS
2573 edhill 1.21
2574 edhill 1.121 ftl_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2575 edhill 1.71 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2576 edhill 1.23 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2577 adcroft 1.44 -rm -f ftl_config.template
2578 edhill 1.23 @make \$(F77FILES)
2579 edhill 1.22 @make \$(AD_FLOW_FILES)
2580 edhill 1.121 cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
2581 edhill 1.22
2582 edhill 1.121 ftl_taf_output.$FS: ftl_input_code.$FS
2583     \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2584     cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2585 edhill 1.14
2586 heimbach 1.40 ftltafonly:
2587 edhill 1.121 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2588     cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2589 heimbach 1.40
2590 edhill 1.19 ftl_taf: ftl_taf_output.o \$(OBJFILES)
2591 edhill 1.21 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
2592 edhill 1.14
2593 edhill 1.121 ftl_tamc_output.$FS: ftl_input_code.$FS
2594     \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
2595     cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
2596 edhill 1.16
2597 edhill 1.19 ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
2598 edhill 1.21 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
2599 edhill 1.16
2600    
2601     # ... SVD ...
2602 edhill 1.121 svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
2603 heimbach 1.109 @echo "--->>> Only ran TAF to generate SVD code! <<<---"
2604     @echo "--->>> Do make svdall afterwards to compile. <<<---"
2605     svdall: svd_touch svd_taf
2606 edhill 1.16
2607 heimbach 1.109 svd_taf: \$(OBJFILES)
2608 heimbach 1.40 \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
2609 edhill 1.14
2610 heimbach 1.109 @echo "--->>> Only COMPILE svd code! <<<---"
2611     @echo "--->>> Assumes you previously <<<---"
2612     @echo "--->>> did make svdtaf <<<---"
2613    
2614     svd_touch:
2615     @echo "--->>> Only COMPILE svd code! <<<---"
2616     @echo "--->>> Assumes you previously <<<---"
2617     @echo "--->>> did make svdtaf <<<---"
2618 edhill 1.121 touch ad_taf_output.$FS ftl_taf_output.$FS
2619     \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
2620     \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
2621 heimbach 1.109 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2622     cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2623     -rm -f ftl_config.template
2624 edhill 1.14
2625     #=========================================
2626 edhill 1.1
2627     EOF
2628 edhill 1.7
2629     if test "x$EXEHOOK" != x ; then
2630     printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE
2631     fi
2632 edhill 1.1
2633     echo " Making list of \"exceptions\" that need \".p\" files"
2634     for i in $KPPFILES ; do
2635     base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
2636     RETVAL=$?
2637     if test "x$RETVAL" != x0 ; then
2638     echo "Error: unable to add file \"$i\" to the exceptions list"
2639     fi
2640 edhill 1.76 echo "$base.$FS: $base.p" >> $MAKEFILE
2641 edhill 1.1 done
2642    
2643     echo " Making list of NOOPTFILES"
2644     for i in $NOOPTFILES ; do
2645     base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
2646     RETVAL=$?
2647     if test "x$RETVAL" != x0 ; then
2648     echo "Error: unable to add file \"$i\" to the exceptions list"
2649     fi
2650 edhill 1.76 echo "$base.o: $base.$FS" >> $MAKEFILE
2651 edhill 1.2 printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE
2652 edhill 1.1 done
2653    
2654     echo " Add rules for links"
2655     cat srclinks.tmp >> $MAKEFILE
2656     rm -f srclinks.tmp
2657    
2658     echo " Adding makedepend marker"
2659 edhill 1.2 printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE
2660 edhill 1.1
2661 edhill 1.2 printf "\n=== Done ===\n"
2662 adcroft 1.47
2663     # Create special header files
2664 edhill 1.71 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
2665 adcroft 1.47 if test ! -f $PACKAGES_DOT_H ; then
2666     mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
2667     else
2668 edhill 1.61 cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
2669 adcroft 1.47 RETVAL=$?
2670     if test "x$RETVAL" = x0 ; then
2671     rm -f $PACKAGES_DOT_H".tmp"
2672     else
2673     mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"
2674     mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
2675     fi
2676     fi
2677     if test ! -f AD_CONFIG.h ; then
2678 edhill 1.71 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
2679 adcroft 1.47 fi
2680 edhill 1.5
2681    
2682     # Write the "state" for future records
2683     if test "x$DUMPSTATE" != xf ; then
2684 edhill 1.71 printf "" > genmake_state
2685 edhill 1.5 for i in $gm_state ; do
2686     t1="t2=\$$i"
2687     eval $t1
2688 edhill 1.12 echo "$i='$t2'" >> genmake_state
2689 edhill 1.5 done
2690     fi

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