| 1 |
#! /usr/bin/env bash |
| 2 |
|
| 3 |
# $Header: /u/gcmpack/MITgcm/tools/example_scripts/csail/test_baudelaire,v 1.3 2010/11/03 19:44:49 jmc Exp $ |
| 4 |
|
| 5 |
# Ed Hill |
| 6 |
|
| 7 |
# Test script for MITgcm that should work on most of the csail.mit.edu |
| 8 |
# Linux machines. |
| 9 |
|
| 10 |
# defaults |
| 11 |
#export PATH="$PATH:/usr/local/bin" |
| 12 |
if [ -d ~/bin ]; then export PATH=$PATH:~/bin ; fi |
| 13 |
#- to get case insensitive "ls" (and order of tested experiments) |
| 14 |
export LC_ALL="en_US.UTF-8" |
| 15 |
# Turn off stack limit for FIZHI & AD-tests |
| 16 |
ulimit -s unlimited |
| 17 |
# MPI test (for now, only with gfortran) |
| 18 |
#if test $MPI = 1 ; then |
| 19 |
export MPI_GCC_DIR=/srv/software/gcc/gcc-packages/gcc-4.4.5/mpich2/mpich2-1.3 |
| 20 |
export MPI_INC_DIR=$MPI_GCC_DIR/include |
| 21 |
export PATH="$PATH:$MPI_GCC_DIR/bin" |
| 22 |
#fi |
| 23 |
|
| 24 |
#- method to acces CVS: |
| 25 |
# export CVSROOT='/u/gcmpack' |
| 26 |
# export CVSROOT=':ext:@mitgcm.org:/u/gcmpack' |
| 27 |
# export CVS_RSH='ssh' ; cvs co -P MITgcm > /dev/null |
| 28 |
# cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co -P MITgcm > /dev/null |
| 29 |
cmdCVS='cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack' |
| 30 |
cmdCVS='cvs -d /u/gcmpack' |
| 31 |
|
| 32 |
TESTDIR="/scratch/jmc/test_"`hostname -s` |
| 33 |
MC=13 |
| 34 |
checkOut=1 |
| 35 |
sepDir=1 |
| 36 |
option= |
| 37 |
tst_list='g7a adm mpa g77 gfo+rs mth mp2+rs mpi ifc' |
| 38 |
#tst_list='g77 adm gfo ifc mth pgi+rs' |
| 39 |
#tst_list='g77 gfo+rs mth' |
| 40 |
|
| 41 |
#option="-nc" ; checkOut=0 |
| 42 |
#option="-q" ; checkOut=0 |
| 43 |
|
| 44 |
TODAY=`date +%d` |
| 45 |
tdir=$TESTDIR |
| 46 |
if test $checkOut = '0' ; then |
| 47 |
if test -e $tdir/MITgcm/CVS ; then |
| 48 |
echo $tdir/MITgcm/CVS 'exist' |
| 49 |
echo -n "Update the MITgcm code using: $cmdCVS ..." |
| 50 |
cd $tdir/MITgcm |
| 51 |
if test $sepDir = 1 ; then |
| 52 |
$cmdCVS update -P -d > /dev/null |
| 53 |
else |
| 54 |
$cmdCVS update -P -d |
| 55 |
fi |
| 56 |
echo " done" |
| 57 |
else |
| 58 |
echo -n $tdir/MITgcm 'missing ; ' |
| 59 |
checkOut=1 |
| 60 |
fi |
| 61 |
fi |
| 62 |
if test $checkOut = '1' ; then |
| 63 |
if test -e $tdir ; then |
| 64 |
echo -n "Removing working copy: $tdir/MITgcm ..." |
| 65 |
test -e $tdir/MITgcm && rm -rf $tdir/MITgcm |
| 66 |
else |
| 67 |
echo -n "Creating a working dir: $tdir ..." |
| 68 |
mkdir $tdir |
| 69 |
fi |
| 70 |
echo " done" |
| 71 |
echo -n "Downloading the MITgcm code using: $cmdCVS ..." |
| 72 |
cd $tdir |
| 73 |
$cmdCVS co -P MITgcm > /dev/null |
| 74 |
echo " done" |
| 75 |
else |
| 76 |
cd $tdir |
| 77 |
fi |
| 78 |
|
| 79 |
#------------------------------------------------------------------------ |
| 80 |
|
| 81 |
firstTst=`echo $tst_list | awk '{print $1}'` |
| 82 |
last_Tst=`echo $tst_list | awk '{print $NF}'` |
| 83 |
for tt in $tst_list |
| 84 |
do |
| 85 |
|
| 86 |
echo "================================================================" |
| 87 |
typ=`echo $tt | sed 's/+rs//'` |
| 88 |
#- check day and time: |
| 89 |
curDay=`date +%d` ; curHour=`date +%H` |
| 90 |
if [ $curDay -ne $TODAY ] ; then |
| 91 |
date ; echo "day is over => skip test $typ" |
| 92 |
continue |
| 93 |
fi |
| 94 |
if [ $curHour -ge 18 ] ; then |
| 95 |
date ; echo "too late to run test $typ" |
| 96 |
continue |
| 97 |
fi |
| 98 |
#- clean-up old output files |
| 99 |
rm -f $tdir/output_${typ}* |
| 100 |
if test $sepDir = 1 ; then |
| 101 |
new_dir="MITgcm_$typ" |
| 102 |
if test -d $new_dir/CVS -a $checkOut = '0' ; then |
| 103 |
pushd $new_dir |
| 104 |
echo -n "Update the MITgcm code using: $cmdCVS ..." |
| 105 |
$cmdCVS update -P -d |
| 106 |
echo " done" |
| 107 |
else |
| 108 |
test -e $new_dir && rm -rf $new_dir |
| 109 |
mkdir $new_dir |
| 110 |
pushd $new_dir |
| 111 |
cp -ra ../MITgcm/* . |
| 112 |
fi |
| 113 |
else |
| 114 |
pushd MITgcm |
| 115 |
fi |
| 116 |
cd verification |
| 117 |
|
| 118 |
MPI=0 |
| 119 |
case $typ in |
| 120 |
'g77'|'g7a') OPTFILE='../tools/build_options/linux_amd64_g77' ;; |
| 121 |
'gfo'|'adm'|'mth') OPTFILE='../tools/build_options/linux_amd64_gfortran' ;; |
| 122 |
'ifc') OPTFILE='../tools/build_options/linux_amd64_ifort11' ;; |
| 123 |
'pgi') OPTFILE='../tools/build_options/linux_amd64_pgf77' ;; |
| 124 |
'mpa'|'mpi'|'mp2') OPTFILE='../tools/build_options/linux_amd64_gfortran+mpi_generic' |
| 125 |
MPI=1 ;; |
| 126 |
*) OPTFILE= ;; |
| 127 |
esac |
| 128 |
if test $typ = 'mth' -o $typ = 'mp2' ; then |
| 129 |
export GOMP_STACKSIZE=400m |
| 130 |
fi |
| 131 |
if test $MPI = 1 ; then |
| 132 |
export MPI_INC_DIR=$MPI_GCC_DIR/include |
| 133 |
EXE="mpirun -np 2 ./mitgcmuv" |
| 134 |
fi |
| 135 |
|
| 136 |
if test $sepDir = 0 -a $checkOut = '1' -a $tt = $firstTst ; then |
| 137 |
#-- cleaning: |
| 138 |
echo "======================" |
| 139 |
echo "Cleaning test directories:" |
| 140 |
cmdCLN="./testreport -clean" |
| 141 |
echo " clean dir running: $cmdCLN" |
| 142 |
$cmdCLN > /dev/null 2>&1 |
| 143 |
echo "======================" |
| 144 |
echo |
| 145 |
fi |
| 146 |
|
| 147 |
if test $typ = 'g77' |
| 148 |
then |
| 149 |
|
| 150 |
echo -n "Running testreport using:" |
| 151 |
comm="./testreport -a jmc@mitgcm.org" |
| 152 |
# comm="$comm -match $MC" |
| 153 |
if test "x$OPTFILE" != x ; then |
| 154 |
comm="$comm -of=$OPTFILE" |
| 155 |
fi |
| 156 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 157 |
comm="$comm -mpi -command \"\$EXE\"" |
| 158 |
else echo '' ; fi |
| 159 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 160 |
echo " \"eval $comm\"" |
| 161 |
echo "======================" |
| 162 |
eval $comm > $tdir/output_$typ 2>&1 |
| 163 |
tail -100 $tdir/output_$typ |
| 164 |
echo |
| 165 |
|
| 166 |
fi |
| 167 |
|
| 168 |
if test $typ = 'gfo' |
| 169 |
then |
| 170 |
|
| 171 |
echo -n "Running testreport using:" |
| 172 |
comm="./testreport -a jmc@mitgcm.org" |
| 173 |
comm="$comm -match $MC" |
| 174 |
if test "x$OPTFILE" != x ; then |
| 175 |
comm="$comm -of=$OPTFILE" |
| 176 |
fi |
| 177 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 178 |
comm="$comm -mpi -command \"\$EXE\"" |
| 179 |
else echo '' ; fi |
| 180 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 181 |
echo " \"eval $comm\"" |
| 182 |
echo "======================" |
| 183 |
eval $comm > $tdir/output_$typ 2>&1 |
| 184 |
tail -100 $tdir/output_$typ |
| 185 |
echo |
| 186 |
|
| 187 |
fi |
| 188 |
|
| 189 |
if test $typ = 'g7a' |
| 190 |
then |
| 191 |
|
| 192 |
echo -n "Running testreport using:" |
| 193 |
comm="./testreport -adm -a jmc@mitgcm.org" |
| 194 |
# comm="$comm -match $MC" |
| 195 |
if test "x$OPTFILE" != x ; then |
| 196 |
comm="$comm -of=$OPTFILE" |
| 197 |
fi |
| 198 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 199 |
comm="$comm -mpi -command \"\$EXE\"" |
| 200 |
else echo '' ; fi |
| 201 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 202 |
echo " \"eval $comm\"" |
| 203 |
echo "======================" |
| 204 |
eval $comm > $tdir/output_$typ 2>&1 |
| 205 |
tail -60 $tdir/output_$typ |
| 206 |
echo |
| 207 |
|
| 208 |
fi |
| 209 |
|
| 210 |
if test $typ = 'adm' |
| 211 |
then |
| 212 |
|
| 213 |
echo -n "Running testreport using:" |
| 214 |
comm="./testreport -adm -a jmc@mitgcm.org" |
| 215 |
comm="$comm -match $MC" |
| 216 |
if test "x$OPTFILE" != x ; then |
| 217 |
comm="$comm -of=$OPTFILE" |
| 218 |
fi |
| 219 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 220 |
comm="$comm -mpi -command \"\$EXE\"" |
| 221 |
else echo '' ; fi |
| 222 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 223 |
echo " \"eval $comm\"" |
| 224 |
echo "======================" |
| 225 |
eval $comm > $tdir/output_$typ 2>&1 |
| 226 |
tail -60 $tdir/output_$typ |
| 227 |
echo |
| 228 |
|
| 229 |
fi |
| 230 |
|
| 231 |
if test $typ = 'ifc' |
| 232 |
then |
| 233 |
|
| 234 |
source /srv/software/intel/intel-11.1.073/bin/ifortvars.sh intel64 |
| 235 |
echo -n "Running testreport using:" |
| 236 |
comm="./testreport -a jmc@mitgcm.org" |
| 237 |
# comm="$comm -match $MC" |
| 238 |
if test "x$OPTFILE" != x ; then |
| 239 |
comm="$comm -of=$OPTFILE" |
| 240 |
fi |
| 241 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 242 |
comm="$comm -mpi -command \"\$EXE\"" |
| 243 |
else echo '' ; fi |
| 244 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 245 |
echo " \"eval $comm\"" |
| 246 |
echo "======================" |
| 247 |
eval $comm > $tdir/output_$typ 2>&1 |
| 248 |
tail -100 $tdir/output_$typ |
| 249 |
echo |
| 250 |
|
| 251 |
fi |
| 252 |
|
| 253 |
if test $typ = 'mth' |
| 254 |
then |
| 255 |
|
| 256 |
export OMP_NUM_THREADS=2 |
| 257 |
echo -n "Running testreport using:" |
| 258 |
comm="./testreport -mth -a jmc@mitgcm.org" |
| 259 |
comm="$comm -match $MC" |
| 260 |
if test "x$OPTFILE" != x ; then |
| 261 |
comm="$comm -of=$OPTFILE" |
| 262 |
fi |
| 263 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 264 |
comm="$comm -mpi -command \"\$EXE\"" |
| 265 |
else echo '' ; fi |
| 266 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 267 |
echo " \"eval $comm\"" |
| 268 |
echo "======================" |
| 269 |
eval $comm > $tdir/output_$typ 2>&1 |
| 270 |
tail -100 $tdir/output_$typ |
| 271 |
echo |
| 272 |
|
| 273 |
fi |
| 274 |
|
| 275 |
if test $typ = 'pgi' |
| 276 |
then |
| 277 |
|
| 278 |
export PGI=/srv/software/pgi/pgi-10.9 |
| 279 |
export PATH="$PATH:$PGI/linux86-64/10.9/bin" |
| 280 |
export LM_LICENSE_FILE=$PGI/license.dat |
| 281 |
echo -n "Running testreport using:" |
| 282 |
comm="./testreport -a jmc@mitgcm.org" |
| 283 |
# comm="$comm -match $MC" |
| 284 |
#comm="$comm -skd tutorial_advection_in_gyre" |
| 285 |
if test "x$OPTFILE" != x ; then |
| 286 |
comm="$comm -of=$OPTFILE" |
| 287 |
fi |
| 288 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 289 |
comm="$comm -mpi -command \"\$EXE\"" |
| 290 |
else echo '' ; fi |
| 291 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 292 |
echo " \"eval $comm\"" |
| 293 |
echo "======================" |
| 294 |
eval $comm > $tdir/output_$typ 2>&1 |
| 295 |
tail -100 $tdir/output_${typ} |
| 296 |
echo |
| 297 |
|
| 298 |
fi |
| 299 |
|
| 300 |
#-- MPI tests --- |
| 301 |
if test $typ = 'mpa' |
| 302 |
then |
| 303 |
|
| 304 |
EXE="mpirun -np 2 ./mitgcmuv_ad" |
| 305 |
echo -n "Running testreport using:" |
| 306 |
comm="./testreport -adm -a jmc@mitgcm.org" |
| 307 |
comm="$comm -match $MC" |
| 308 |
if test "x$OPTFILE" != x ; then |
| 309 |
comm="$comm -of=$OPTFILE" |
| 310 |
fi |
| 311 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 312 |
comm="$comm -mpi -command \"\$EXE\"" |
| 313 |
else echo '' ; fi |
| 314 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 315 |
echo " \"eval $comm\"" |
| 316 |
echo "======================" |
| 317 |
eval $comm > $tdir/output_$typ 2>&1 |
| 318 |
tail -60 $tdir/output_$typ |
| 319 |
echo |
| 320 |
|
| 321 |
fi |
| 322 |
|
| 323 |
if test $typ = 'mpi' |
| 324 |
then |
| 325 |
|
| 326 |
echo -n "Running testreport using:" |
| 327 |
comm="./testreport -a jmc@mitgcm.org" |
| 328 |
comm="$comm -match $MC" |
| 329 |
if test "x$OPTFILE" != x ; then |
| 330 |
comm="$comm -of=$OPTFILE" |
| 331 |
fi |
| 332 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 333 |
comm="$comm -mpi -command \"\$EXE\"" |
| 334 |
else echo '' ; fi |
| 335 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 336 |
echo " \"eval $comm\"" |
| 337 |
echo "======================" |
| 338 |
eval $comm > $tdir/output_$typ 2>&1 |
| 339 |
tail -100 $tdir/output_$typ |
| 340 |
echo |
| 341 |
|
| 342 |
fi |
| 343 |
|
| 344 |
if test $typ = 'mp2' |
| 345 |
then |
| 346 |
|
| 347 |
export OMP_NUM_THREADS=2 |
| 348 |
echo -n "Running testreport using:" |
| 349 |
comm="./testreport -mth -a jmc@mitgcm.org" |
| 350 |
comm="$comm -match $MC" |
| 351 |
if test "x$OPTFILE" != x ; then |
| 352 |
comm="$comm -of=$OPTFILE" |
| 353 |
fi |
| 354 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 355 |
comm="$comm -mpi -command \"\$EXE\"" |
| 356 |
else echo '' ; fi |
| 357 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 358 |
echo " \"eval $comm\"" |
| 359 |
echo "======================" |
| 360 |
eval $comm > $tdir/output_$typ 2>&1 |
| 361 |
tail -100 $tdir/output_$typ |
| 362 |
echo |
| 363 |
|
| 364 |
fi |
| 365 |
|
| 366 |
#-- also test restart (test 2+2=4) |
| 367 |
if test $tt != $typ |
| 368 |
then |
| 369 |
echo "testing restart using:" |
| 370 |
comm="../tools/do_tst_2+2 -a jmc@mitgcm.org" |
| 371 |
if test $MPI = 1 ; then |
| 372 |
echo " \"$comm -mpi -exe $EXE\"" |
| 373 |
echo "======================" |
| 374 |
$comm -mpi -exe "$EXE" > $tdir/output_2+2 2>&1 |
| 375 |
else |
| 376 |
echo " \"$comm\"" |
| 377 |
echo "======================" |
| 378 |
$comm > $tdir/output_2+2 2>&1 |
| 379 |
fi |
| 380 |
#tail -100 $tdir/output_2+2 |
| 381 |
echo ; cat tst_2+2_out.txt |
| 382 |
echo |
| 383 |
fi |
| 384 |
export OMP_NUM_THREADS=1 |
| 385 |
|
| 386 |
if test $sepDir = 0 ; then |
| 387 |
#-- cleaning: |
| 388 |
echo "======================" |
| 389 |
echo "Cleaning test directories:" |
| 390 |
if test $tt != $typ ; then |
| 391 |
cmdCLN="../tools/do_tst_2+2 -clean" |
| 392 |
echo " clean tst_2+2 running: $cmdCLN" |
| 393 |
$cmdCLN >> $tdir/output_2+2 2>&1 |
| 394 |
fi |
| 395 |
if test $tt != $last_Tst ; then |
| 396 |
cmdCLN="./testreport -clean" |
| 397 |
echo " clean dir running: $cmdCLN" |
| 398 |
$cmdCLN > /dev/null 2>&1 |
| 399 |
fi |
| 400 |
echo "======================" |
| 401 |
echo |
| 402 |
fi |
| 403 |
popd |
| 404 |
|
| 405 |
done |
Parent Directory
| 
Revision Log
| 
Revision Graph