#! /usr/bin/env bash # $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/example_scripts/csail/test_baudelaire,v 1.10 2012/06/27 18:55:31 jmc Exp $ # Test script for MITgcm that should work on most of the csail.mit.edu # Linux machines. # defaults #export PATH="$PATH:/usr/local/bin" if [ -d ~/bin ]; then export PATH=$PATH:~/bin ; fi #- to get case insensitive "ls" (and order of tested experiments) export LC_ALL="en_US.UTF-8" # Turn off stack limit for FIZHI & AD-tests ulimit -s unlimited # MPI test (for now, only with gfortran) export MPI_GCC_DIR=/srv/software/gcc/gcc-packages/gcc-4.4.5/mpich2/mpich2-1.3 export MPI_INC_DIR=$MPI_GCC_DIR/include export PATH="$PATH:$MPI_GCC_DIR/bin" #- method to acces CVS: # export CVSROOT='/u/gcmpack' # export CVSROOT=':ext:@mitgcm.org:/u/gcmpack' # export CVS_RSH='ssh' ; cvs co -P MITgcm > /dev/null # cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co -P MITgcm > /dev/null cmdCVS='cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack' cmdCVS='cvs -d /u/gcmpack' TESTDIR="/scratch/jmc/test_"`hostname -s` MC=13 checkOut=1 sepDir=1 option= tst_list='g7a adm mpa g77 gfo+rs mth mp2+rs mpi ifc' #tst_list='g77 adm gfo ifc mth pgi+rs' #tst_list='adm gfo+rs mth' #option="-nc" ; checkOut=0 #option="-q" ; checkOut=0 TODAY=`date +%d` tdir=$TESTDIR if test $checkOut = '0' ; then if test -e $tdir/MITgcm/CVS ; then echo $tdir/MITgcm/CVS 'exist' echo -n "Update the MITgcm code using: $cmdCVS ..." cd $tdir/MITgcm if test $sepDir = 1 ; then $cmdCVS update -P -d > /dev/null else $cmdCVS update -P -d fi echo " done" else echo -n $tdir/MITgcm 'missing ; ' checkOut=1 fi fi if test $checkOut = '1' ; then if test -e $tdir ; then echo -n "Removing working copy: $tdir/MITgcm ..." test -e $tdir/MITgcm && rm -rf $tdir/MITgcm else echo -n "Creating a working dir: $tdir ..." mkdir $tdir fi echo " done" echo -n "Downloading the MITgcm code using: $cmdCVS ..." cd $tdir $cmdCVS co -P MITgcm > /dev/null echo " done" else cd $tdir fi #------------------------------------------------------------------------ firstTst=`echo $tst_list | awk '{print $1}'` last_Tst=`echo $tst_list | awk '{print $NF}'` for tt in $tst_list do echo "================================================================" typ=`echo $tt | sed 's/+rs//'` #- check day and time: curDay=`date +%d` ; curHour=`date +%H` if [ $curDay -ne $TODAY ] ; then date ; echo "day is over => skip test $typ" continue fi if [ $curHour -ge 18 ] ; then date ; echo "too late to run test $typ" continue fi #- clean-up old output files rm -f $tdir/output_${typ}* if test $sepDir = 1 ; then new_dir="MITgcm_$typ" if test -d $new_dir/CVS -a $checkOut = '0' ; then pushd $new_dir echo -n "Update the MITgcm code using: $cmdCVS ..." $cmdCVS update -P -d echo " done" else test -e $new_dir && rm -rf $new_dir mkdir $new_dir pushd $new_dir cp -ra ../MITgcm/* . fi else pushd MITgcm fi cd verification #-- set the testreport command: nbl='-100' comm="./testreport" if test $typ = 'g7a' -o $typ = 'adm' -o $typ = 'mpa' ; then nbl='-60' comm="$comm -adm" elif test $typ = 'mth' -o $typ = 'mp2' ; then export GOMP_STACKSIZE=400m export OMP_NUM_THREADS=2 comm="$comm -mth" fi comm="$comm -a jmc@mitgcm.org" #-- set the optfile (+ mpi & match-precision) MPI=0 case $typ in 'g77'|'g7a') OPTFILE='../tools/build_options/linux_amd64_g77' ;; 'gfo'|'adm'|'mth') OPTFILE='../tools/build_options/linux_amd64_gfortran' comm="$comm -match $MC -devel" ;; 'ifc') OPTFILE='../tools/build_options/linux_amd64_ifort11' ;; 'pgi') OPTFILE='../tools/build_options/linux_amd64_pgf77' ;; 'mpa'|'mpi'|'mp2') OPTFILE='../tools/build_options/linux_amd64_gfortran' comm="$comm -match $MC -devel" ; MPI=6 ;; *) OPTFILE= ;; esac #-- set MPI command: if test $MPI != 0 ; then if test $typ = 'mp2' ; then MPI=3 ; fi if test $typ = 'mpa' ; then EXE="mpirun -np TR_NPROC ./mitgcmuv_ad" else EXE="mpirun -np TR_NPROC ./mitgcmuv" fi fi #-- set specific Env Vars: if test $typ = 'ifc' ; then source /srv/software/intel/intel-11.1.073/bin/ifortvars.sh intel64 fi if test $typ = 'pgi' ; then #listT='fizhi-cs-32x32x40 fizhi-cs-aqualev20' export PGI=/srv/software/pgi/pgi-10.9 export PATH="$PATH:$PGI/linux86-64/10.9/bin" export LM_LICENSE_FILE=$PGI/license.dat fi basename $OPTFILE | grep gfortran > /dev/null 2>&1 ; retv=$? ; GFORTRAN_OPTFILE=f ; if test $retv == 0 ; then GFORTRAN_OPTFILE='t' ; fi export GFORTRAN_OPTFILE if test $sepDir = 0 -a $checkOut = '1' -a $tt = $firstTst ; then #-- cleaning: echo "======================" echo "Cleaning test directories:" cmdCLN="./testreport -clean" echo " clean dir running: $cmdCLN" $cmdCLN > /dev/null 2>&1 echo "======================" echo fi #-- run the testreport command: echo -n "Running testreport using:" if test "x$OPTFILE" != x ; then comm="$comm -of=$OPTFILE" fi if test $MPI = 0 ; then echo '' else echo " (EXE='$EXE')" comm="$comm -MPI $MPI -command \"\$EXE\"" fi if test "x$option" != x ; then comm="$comm $option" ; fi #if test $typ = 'pgi' ; then comm="$comm -t \"\$listT\"" ; fi echo " \"eval $comm\"" echo "======================" eval $comm > $tdir/output_$typ 2>&1 tail $nbl $tdir/output_$typ echo #-- also test restart (test 2+2=4) if test $tt != $typ then echo "testing restart using:" comm="../tools/do_tst_2+2 -a jmc@mitgcm.org" if test $MPI = 0 ; then echo " \"$comm\"" echo "======================" $comm > $tdir/output_2+2 2>&1 else echo " \"$comm -mpi -exe $EXE\"" echo "======================" $comm -mpi -exe "$EXE" > $tdir/output_2+2 2>&1 fi #tail $nbl $tdir/output_2+2 echo ; cat tst_2+2_out.txt echo fi export OMP_NUM_THREADS=1 if test $sepDir = 0 ; then #-- cleaning: echo "======================" echo "Cleaning test directories:" if test $tt != $typ ; then cmdCLN="../tools/do_tst_2+2 -clean" echo " clean tst_2+2 running: $cmdCLN" $cmdCLN >> $tdir/output_2+2 2>&1 fi if test $tt != $last_Tst ; then cmdCLN="./testreport -clean" echo " clean dir running: $cmdCLN" $cmdCLN > /dev/null 2>&1 fi echo "======================" echo fi popd done