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jmc |
1.1 |
#! /usr/bin/env bash |
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jmc |
1.4 |
# $Header: /u/gcmpack/MITgcm/tools/example_scripts/csail/test_baudelaire,v 1.3 2010/11/03 19:44:49 jmc Exp $ |
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jmc |
1.1 |
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# Ed Hill |
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# Test script for MITgcm that should work on most of the csail.mit.edu |
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# Linux machines. |
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# defaults |
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#export PATH="$PATH:/usr/local/bin" |
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if [ -d ~/bin ]; then export PATH=$PATH:~/bin ; fi |
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#- to get case insensitive "ls" (and order of tested experiments) |
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export LC_ALL="en_US.UTF-8" |
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# Turn off stack limit for FIZHI & AD-tests |
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ulimit -s unlimited |
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jmc |
1.4 |
# MPI test (for now, only with gfortran) |
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#if test $MPI = 1 ; then |
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export MPI_GCC_DIR=/srv/software/gcc/gcc-packages/gcc-4.4.5/mpich2/mpich2-1.3 |
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export MPI_INC_DIR=$MPI_GCC_DIR/include |
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export PATH="$PATH:$MPI_GCC_DIR/bin" |
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#fi |
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jmc |
1.1 |
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#- method to acces CVS: |
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# export CVSROOT='/u/gcmpack' |
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# export CVSROOT=':ext:@mitgcm.org:/u/gcmpack' |
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# export CVS_RSH='ssh' ; cvs co -P MITgcm > /dev/null |
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# cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co -P MITgcm > /dev/null |
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cmdCVS='cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack' |
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cmdCVS='cvs -d /u/gcmpack' |
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TESTDIR="/scratch/jmc/test_"`hostname -s` |
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jmc |
1.3 |
MC=13 |
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jmc |
1.1 |
checkOut=1 |
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sepDir=1 |
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option= |
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jmc |
1.4 |
tst_list='g7a adm mpa g77 gfo+rs mth mp2+rs mpi ifc' |
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jmc |
1.1 |
#tst_list='g77 adm gfo ifc mth pgi+rs' |
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jmc |
1.2 |
#tst_list='g77 gfo+rs mth' |
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jmc |
1.1 |
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#option="-nc" ; checkOut=0 |
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#option="-q" ; checkOut=0 |
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TODAY=`date +%d` |
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tdir=$TESTDIR |
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if test $checkOut = '0' ; then |
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if test -e $tdir/MITgcm/CVS ; then |
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echo $tdir/MITgcm/CVS 'exist' |
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echo -n "Update the MITgcm code using: $cmdCVS ..." |
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cd $tdir/MITgcm |
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if test $sepDir = 1 ; then |
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$cmdCVS update -P -d > /dev/null |
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else |
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$cmdCVS update -P -d |
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fi |
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echo " done" |
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else |
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echo -n $tdir/MITgcm 'missing ; ' |
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checkOut=1 |
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fi |
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fi |
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if test $checkOut = '1' ; then |
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if test -e $tdir ; then |
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echo -n "Removing working copy: $tdir/MITgcm ..." |
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test -e $tdir/MITgcm && rm -rf $tdir/MITgcm |
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else |
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echo -n "Creating a working dir: $tdir ..." |
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mkdir $tdir |
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fi |
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echo " done" |
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echo -n "Downloading the MITgcm code using: $cmdCVS ..." |
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cd $tdir |
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$cmdCVS co -P MITgcm > /dev/null |
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echo " done" |
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else |
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cd $tdir |
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fi |
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#------------------------------------------------------------------------ |
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firstTst=`echo $tst_list | awk '{print $1}'` |
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last_Tst=`echo $tst_list | awk '{print $NF}'` |
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for tt in $tst_list |
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do |
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echo "================================================================" |
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typ=`echo $tt | sed 's/+rs//'` |
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#- check day and time: |
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curDay=`date +%d` ; curHour=`date +%H` |
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if [ $curDay -ne $TODAY ] ; then |
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date ; echo "day is over => skip test $typ" |
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continue |
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fi |
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if [ $curHour -ge 18 ] ; then |
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date ; echo "too late to run test $typ" |
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continue |
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fi |
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#- clean-up old output files |
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rm -f $tdir/output_${typ}* |
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if test $sepDir = 1 ; then |
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new_dir="MITgcm_$typ" |
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if test -d $new_dir/CVS -a $checkOut = '0' ; then |
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pushd $new_dir |
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echo -n "Update the MITgcm code using: $cmdCVS ..." |
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$cmdCVS update -P -d |
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echo " done" |
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else |
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test -e $new_dir && rm -rf $new_dir |
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mkdir $new_dir |
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pushd $new_dir |
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cp -ra ../MITgcm/* . |
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fi |
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else |
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pushd MITgcm |
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fi |
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cd verification |
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jmc |
1.4 |
MPI=0 |
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jmc |
1.1 |
case $typ in |
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jmc |
1.4 |
'g77'|'g7a') OPTFILE='../tools/build_options/linux_amd64_g77' ;; |
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'gfo'|'adm'|'mth') OPTFILE='../tools/build_options/linux_amd64_gfortran' ;; |
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'ifc') OPTFILE='../tools/build_options/linux_amd64_ifort11' ;; |
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'pgi') OPTFILE='../tools/build_options/linux_amd64_pgf77' ;; |
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'mpa'|'mpi'|'mp2') OPTFILE='../tools/build_options/linux_amd64_gfortran+mpi_generic' |
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MPI=1 ;; |
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*) OPTFILE= ;; |
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jmc |
1.1 |
esac |
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jmc |
1.4 |
if test $typ = 'mth' -o $typ = 'mp2' ; then |
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export GOMP_STACKSIZE=400m |
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fi |
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if test $MPI = 1 ; then |
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export MPI_INC_DIR=$MPI_GCC_DIR/include |
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EXE="mpirun -np 2 ./mitgcmuv" |
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fi |
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jmc |
1.1 |
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if test $sepDir = 0 -a $checkOut = '1' -a $tt = $firstTst ; then |
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#-- cleaning: |
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echo "======================" |
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echo "Cleaning test directories:" |
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cmdCLN="./testreport -clean" |
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echo " clean dir running: $cmdCLN" |
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$cmdCLN > /dev/null 2>&1 |
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echo "======================" |
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echo |
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fi |
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if test $typ = 'g77' |
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then |
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jmc |
1.4 |
echo -n "Running testreport using:" |
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jmc |
1.1 |
comm="./testreport -a jmc@mitgcm.org" |
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jmc |
1.3 |
# comm="$comm -match $MC" |
| 153 |
jmc |
1.1 |
if test "x$OPTFILE" != x ; then |
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comm="$comm -of=$OPTFILE" |
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fi |
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jmc |
1.4 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
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comm="$comm -mpi -command \"\$EXE\"" |
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else echo '' ; fi |
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jmc |
1.1 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
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jmc |
1.4 |
echo " \"eval $comm\"" |
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jmc |
1.1 |
echo "======================" |
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jmc |
1.4 |
eval $comm > $tdir/output_$typ 2>&1 |
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jmc |
1.1 |
tail -100 $tdir/output_$typ |
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echo |
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fi |
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if test $typ = 'gfo' |
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then |
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jmc |
1.4 |
echo -n "Running testreport using:" |
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jmc |
1.1 |
comm="./testreport -a jmc@mitgcm.org" |
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jmc |
1.3 |
comm="$comm -match $MC" |
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jmc |
1.2 |
if test "x$OPTFILE" != x ; then |
| 175 |
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comm="$comm -of=$OPTFILE" |
| 176 |
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fi |
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jmc |
1.4 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 178 |
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comm="$comm -mpi -command \"\$EXE\"" |
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else echo '' ; fi |
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jmc |
1.2 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
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jmc |
1.4 |
echo " \"eval $comm\"" |
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jmc |
1.2 |
echo "======================" |
| 183 |
jmc |
1.4 |
eval $comm > $tdir/output_$typ 2>&1 |
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jmc |
1.2 |
tail -100 $tdir/output_$typ |
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echo |
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fi |
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| 189 |
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if test $typ = 'g7a' |
| 190 |
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then |
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| 192 |
jmc |
1.4 |
echo -n "Running testreport using:" |
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jmc |
1.2 |
comm="./testreport -adm -a jmc@mitgcm.org" |
| 194 |
jmc |
1.3 |
# comm="$comm -match $MC" |
| 195 |
jmc |
1.1 |
if test "x$OPTFILE" != x ; then |
| 196 |
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comm="$comm -of=$OPTFILE" |
| 197 |
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fi |
| 198 |
jmc |
1.4 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 199 |
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comm="$comm -mpi -command \"\$EXE\"" |
| 200 |
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else echo '' ; fi |
| 201 |
jmc |
1.1 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 202 |
jmc |
1.4 |
echo " \"eval $comm\"" |
| 203 |
jmc |
1.1 |
echo "======================" |
| 204 |
jmc |
1.4 |
eval $comm > $tdir/output_$typ 2>&1 |
| 205 |
jmc |
1.2 |
tail -60 $tdir/output_$typ |
| 206 |
jmc |
1.1 |
echo |
| 207 |
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| 208 |
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fi |
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| 210 |
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if test $typ = 'adm' |
| 211 |
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then |
| 212 |
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| 213 |
jmc |
1.4 |
echo -n "Running testreport using:" |
| 214 |
jmc |
1.1 |
comm="./testreport -adm -a jmc@mitgcm.org" |
| 215 |
jmc |
1.3 |
comm="$comm -match $MC" |
| 216 |
jmc |
1.1 |
if test "x$OPTFILE" != x ; then |
| 217 |
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comm="$comm -of=$OPTFILE" |
| 218 |
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fi |
| 219 |
jmc |
1.4 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 220 |
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comm="$comm -mpi -command \"\$EXE\"" |
| 221 |
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else echo '' ; fi |
| 222 |
jmc |
1.1 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 223 |
jmc |
1.4 |
echo " \"eval $comm\"" |
| 224 |
jmc |
1.1 |
echo "======================" |
| 225 |
jmc |
1.4 |
eval $comm > $tdir/output_$typ 2>&1 |
| 226 |
jmc |
1.1 |
tail -60 $tdir/output_$typ |
| 227 |
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echo |
| 228 |
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| 229 |
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fi |
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| 231 |
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if test $typ = 'ifc' |
| 232 |
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then |
| 233 |
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| 234 |
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source /srv/software/intel/intel-11.1.073/bin/ifortvars.sh intel64 |
| 235 |
jmc |
1.4 |
echo -n "Running testreport using:" |
| 236 |
jmc |
1.1 |
comm="./testreport -a jmc@mitgcm.org" |
| 237 |
jmc |
1.3 |
# comm="$comm -match $MC" |
| 238 |
jmc |
1.1 |
if test "x$OPTFILE" != x ; then |
| 239 |
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comm="$comm -of=$OPTFILE" |
| 240 |
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fi |
| 241 |
jmc |
1.4 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 242 |
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comm="$comm -mpi -command \"\$EXE\"" |
| 243 |
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else echo '' ; fi |
| 244 |
jmc |
1.1 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 245 |
jmc |
1.4 |
echo " \"eval $comm\"" |
| 246 |
jmc |
1.1 |
echo "======================" |
| 247 |
jmc |
1.4 |
eval $comm > $tdir/output_$typ 2>&1 |
| 248 |
jmc |
1.1 |
tail -100 $tdir/output_$typ |
| 249 |
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echo |
| 250 |
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| 251 |
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fi |
| 252 |
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| 253 |
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if test $typ = 'mth' |
| 254 |
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then |
| 255 |
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| 256 |
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export OMP_NUM_THREADS=2 |
| 257 |
jmc |
1.4 |
echo -n "Running testreport using:" |
| 258 |
jmc |
1.1 |
comm="./testreport -mth -a jmc@mitgcm.org" |
| 259 |
jmc |
1.3 |
comm="$comm -match $MC" |
| 260 |
jmc |
1.1 |
if test "x$OPTFILE" != x ; then |
| 261 |
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comm="$comm -of=$OPTFILE" |
| 262 |
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fi |
| 263 |
jmc |
1.4 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 264 |
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comm="$comm -mpi -command \"\$EXE\"" |
| 265 |
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else echo '' ; fi |
| 266 |
jmc |
1.1 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 267 |
jmc |
1.4 |
echo " \"eval $comm\"" |
| 268 |
jmc |
1.1 |
echo "======================" |
| 269 |
jmc |
1.4 |
eval $comm > $tdir/output_$typ 2>&1 |
| 270 |
jmc |
1.1 |
tail -100 $tdir/output_$typ |
| 271 |
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echo |
| 272 |
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| 273 |
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fi |
| 274 |
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| 275 |
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if test $typ = 'pgi' |
| 276 |
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then |
| 277 |
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| 278 |
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export PGI=/srv/software/pgi/pgi-10.9 |
| 279 |
jmc |
1.4 |
export PATH="$PATH:$PGI/linux86-64/10.9/bin" |
| 280 |
jmc |
1.1 |
export LM_LICENSE_FILE=$PGI/license.dat |
| 281 |
jmc |
1.4 |
echo -n "Running testreport using:" |
| 282 |
jmc |
1.3 |
comm="./testreport -a jmc@mitgcm.org" |
| 283 |
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# comm="$comm -match $MC" |
| 284 |
jmc |
1.1 |
#comm="$comm -skd tutorial_advection_in_gyre" |
| 285 |
|
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if test "x$OPTFILE" != x ; then |
| 286 |
|
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comm="$comm -of=$OPTFILE" |
| 287 |
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fi |
| 288 |
jmc |
1.4 |
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 289 |
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comm="$comm -mpi -command \"\$EXE\"" |
| 290 |
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else echo '' ; fi |
| 291 |
jmc |
1.1 |
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 292 |
jmc |
1.4 |
echo " \"eval $comm\"" |
| 293 |
jmc |
1.1 |
echo "======================" |
| 294 |
jmc |
1.4 |
eval $comm > $tdir/output_$typ 2>&1 |
| 295 |
jmc |
1.3 |
tail -100 $tdir/output_${typ} |
| 296 |
jmc |
1.1 |
echo |
| 297 |
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| 298 |
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fi |
| 299 |
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| 300 |
jmc |
1.4 |
#-- MPI tests --- |
| 301 |
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if test $typ = 'mpa' |
| 302 |
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then |
| 303 |
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| 304 |
|
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EXE="mpirun -np 2 ./mitgcmuv_ad" |
| 305 |
|
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echo -n "Running testreport using:" |
| 306 |
|
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comm="./testreport -adm -a jmc@mitgcm.org" |
| 307 |
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comm="$comm -match $MC" |
| 308 |
|
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if test "x$OPTFILE" != x ; then |
| 309 |
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comm="$comm -of=$OPTFILE" |
| 310 |
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fi |
| 311 |
|
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if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 312 |
|
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comm="$comm -mpi -command \"\$EXE\"" |
| 313 |
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else echo '' ; fi |
| 314 |
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if test "x$option" != x ; then comm="$comm $option" ; fi |
| 315 |
|
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echo " \"eval $comm\"" |
| 316 |
|
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echo "======================" |
| 317 |
|
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eval $comm > $tdir/output_$typ 2>&1 |
| 318 |
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tail -60 $tdir/output_$typ |
| 319 |
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echo |
| 320 |
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| 321 |
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fi |
| 322 |
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| 323 |
|
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if test $typ = 'mpi' |
| 324 |
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then |
| 325 |
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| 326 |
|
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echo -n "Running testreport using:" |
| 327 |
|
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comm="./testreport -a jmc@mitgcm.org" |
| 328 |
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comm="$comm -match $MC" |
| 329 |
|
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if test "x$OPTFILE" != x ; then |
| 330 |
|
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comm="$comm -of=$OPTFILE" |
| 331 |
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fi |
| 332 |
|
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if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 333 |
|
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comm="$comm -mpi -command \"\$EXE\"" |
| 334 |
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else echo '' ; fi |
| 335 |
|
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if test "x$option" != x ; then comm="$comm $option" ; fi |
| 336 |
|
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echo " \"eval $comm\"" |
| 337 |
|
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echo "======================" |
| 338 |
|
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eval $comm > $tdir/output_$typ 2>&1 |
| 339 |
|
|
tail -100 $tdir/output_$typ |
| 340 |
|
|
echo |
| 341 |
|
|
|
| 342 |
|
|
fi |
| 343 |
|
|
|
| 344 |
|
|
if test $typ = 'mp2' |
| 345 |
|
|
then |
| 346 |
|
|
|
| 347 |
|
|
export OMP_NUM_THREADS=2 |
| 348 |
|
|
echo -n "Running testreport using:" |
| 349 |
|
|
comm="./testreport -mth -a jmc@mitgcm.org" |
| 350 |
|
|
comm="$comm -match $MC" |
| 351 |
|
|
if test "x$OPTFILE" != x ; then |
| 352 |
|
|
comm="$comm -of=$OPTFILE" |
| 353 |
|
|
fi |
| 354 |
|
|
if test $MPI = 1 ; then echo " (EXE='$EXE')" |
| 355 |
|
|
comm="$comm -mpi -command \"\$EXE\"" |
| 356 |
|
|
else echo '' ; fi |
| 357 |
|
|
if test "x$option" != x ; then comm="$comm $option" ; fi |
| 358 |
|
|
echo " \"eval $comm\"" |
| 359 |
|
|
echo "======================" |
| 360 |
|
|
eval $comm > $tdir/output_$typ 2>&1 |
| 361 |
|
|
tail -100 $tdir/output_$typ |
| 362 |
|
|
echo |
| 363 |
|
|
|
| 364 |
|
|
fi |
| 365 |
|
|
|
| 366 |
jmc |
1.1 |
#-- also test restart (test 2+2=4) |
| 367 |
|
|
if test $tt != $typ |
| 368 |
|
|
then |
| 369 |
|
|
echo "testing restart using:" |
| 370 |
|
|
comm="../tools/do_tst_2+2 -a jmc@mitgcm.org" |
| 371 |
jmc |
1.4 |
if test $MPI = 1 ; then |
| 372 |
|
|
echo " \"$comm -mpi -exe $EXE\"" |
| 373 |
|
|
echo "======================" |
| 374 |
|
|
$comm -mpi -exe "$EXE" > $tdir/output_2+2 2>&1 |
| 375 |
|
|
else |
| 376 |
|
|
echo " \"$comm\"" |
| 377 |
|
|
echo "======================" |
| 378 |
|
|
$comm > $tdir/output_2+2 2>&1 |
| 379 |
|
|
fi |
| 380 |
jmc |
1.1 |
#tail -100 $tdir/output_2+2 |
| 381 |
|
|
echo ; cat tst_2+2_out.txt |
| 382 |
|
|
echo |
| 383 |
|
|
fi |
| 384 |
|
|
export OMP_NUM_THREADS=1 |
| 385 |
|
|
|
| 386 |
|
|
if test $sepDir = 0 ; then |
| 387 |
|
|
#-- cleaning: |
| 388 |
|
|
echo "======================" |
| 389 |
|
|
echo "Cleaning test directories:" |
| 390 |
|
|
if test $tt != $typ ; then |
| 391 |
|
|
cmdCLN="../tools/do_tst_2+2 -clean" |
| 392 |
|
|
echo " clean tst_2+2 running: $cmdCLN" |
| 393 |
|
|
$cmdCLN >> $tdir/output_2+2 2>&1 |
| 394 |
|
|
fi |
| 395 |
|
|
if test $tt != $last_Tst ; then |
| 396 |
|
|
cmdCLN="./testreport -clean" |
| 397 |
|
|
echo " clean dir running: $cmdCLN" |
| 398 |
|
|
$cmdCLN > /dev/null 2>&1 |
| 399 |
|
|
fi |
| 400 |
|
|
echo "======================" |
| 401 |
|
|
echo |
| 402 |
|
|
fi |
| 403 |
|
|
popd |
| 404 |
|
|
|
| 405 |
|
|
done |
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