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#!/bin/bash |
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# |
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# o -N Job Name |
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#PBS -N eh3_pgi |
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# |
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#PBS -q four-twelve |
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# |
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# o -l ask for 3 nodes, each with the attribute "p4". |
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#PBS -l nodes=2:p4 |
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# |
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# o Where to write output |
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#PBS -e /cluster/home/edhill/err_pgi |
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#PBS -o /cluster/home/edhill/out_pgi |
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# |
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# o Export all my environment variables to the job |
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#PBS -V |
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# |
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|
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VENDOR=pgi |
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MF="mf_"$VENDOR |
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RUNIT="runit_"$VENDOR |
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cd ~edhill |
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HERE=`pwd` |
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cat $PBS_NODEFILE > $MF |
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NCPU=`wc -l $MF | awk '{print $1}'` |
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MPI="/usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/"$VENDOR"/bin/mpirun.ch_gm" |
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EXE="$MPI -machinefile $HERE/$MF --gm-kill 5 -v -np $NCPU ./mitgcmuv" |
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|
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cat << EOF > $RUNIT |
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#!/bin/bash |
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|
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$EXE |
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|
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#cp STDOUT.0000 output.txt |
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|
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EOF |
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chmod a+x $RUNIT |
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|
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COMMAND="$HERE/$RUNIT" |
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|
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# cat << EOF > $HERE"/.cvspass" |
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# /1 :pserver:cvsanon@mitgcm.org:2401/u/gcmpack Ah<Zy=0= |
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# EOF |
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TDIR="/SCRATCH/s06/edhill/tmp_"$VENDOR |
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if test -e $TDIR ; then |
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rm -rf $TDIR |
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fi |
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mkdir $TDIR |
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cd $TDIR |
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cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co MITgcm |
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# cvs co MITgcm |
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cd MITgcm/verification |
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OPTFILE="../tools/build_options/linux_ia32_pgf77+mpi_cg01" |
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./testreport -mpi -of $OPTFILE -command $COMMAND -odir "cg01_"$VENDOR -a 'edhill@mitgcm.org' |
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