Annotation of /MITgcm/tools/example_scripts/cg01/cg01_intel_test_mpi

#!/bin/bash
#
# o -N Job Name
#PBS -N eh3_intel
#
#PBS -q four-twelve
#
# o -l ask for 3 nodes, each with the attribute "p4".
#PBS -l nodes=2:p4
#
# o Where to write output
#PBS -e /cluster/home/edhill/err_intel
#PBS -o /cluster/home/edhill/out_intel
#
# o Export all my environment variables to the job
#PBS -V
#

VENDOR=intel
MF="mf_"$VENDOR
RUNIT="runit_"$VENDOR
cd ~edhill
HERE=`pwd`
cat $PBS_NODEFILE > $MF
NCPU=`wc -l $MF | awk '{print $1}'`
MPI="/usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/"$VENDOR"/bin/mpirun.ch_gm"
EXE="$MPI -machinefile $HERE/$MF --gm-kill 5 -v -np $NCPU ./mitgcmuv"

cat << EOF > $RUNIT
#!/bin/bash

$EXE

cp STDOUT.0000 output.txt

EOF
chmod a+x $RUNIT

COMMAND="$HERE/$RUNIT"

# cat << EOF > $HERE"/.cvspass"
# /1 :pserver:cvsanon@mitgcm.org:2401/u/gcmpack Ah<Zy=0=
# EOF
TDIR="/SCRATCH/s06/edhill/tmp_"$VENDOR
if test -e $TDIR ; then
    rm -rf $TDIR
fi
mkdir $TDIR
cd $TDIR
cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co MITgcm
#  cvs co MITgcm
cd MITgcm/verification
#OPTFILE="../tools/build_options/linux_ia32_"$VENDOR"+mpi_cg01"
OPTFILE="../tools/build_options/linux_ia32_ifc+mpi_cg01"
./testreport -mpi -of $OPTFILE -command $COMMAND -odir "cg01_"$VENDOR -a 'edhill@mitgcm.org'


1	edhill	1.1	#!/bin/bash
2			#
3			# o -N Job Name
4			#PBS -N eh3_intel
5			#
6	edhill	1.4	#PBS -q four-twelve
7			#
8	edhill	1.1	# o -l ask for 3 nodes, each with the attribute "p4".
9			#PBS -l nodes=2:p4
10			#
11			# o Where to write output
12			#PBS -e /cluster/home/edhill/err_intel
13			#PBS -o /cluster/home/edhill/out_intel
14			#
15			# o Export all my environment variables to the job
16			#PBS -V
17			#
18
19			VENDOR=intel
20			MF="mf_"$VENDOR
21			RUNIT="runit_"$VENDOR
22			cd ~edhill
23			HERE=`pwd`
24			cat $PBS_NODEFILE > $MF
25			NCPU=`wc -l $MF \| awk '{print $1}'`
26			MPI="/usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/"$VENDOR"/bin/mpirun.ch_gm"
27			EXE="$MPI -machinefile $HERE/$MF --gm-kill 5 -v -np $NCPU ./mitgcmuv"
28
29			cat << EOF > $RUNIT
30			#!/bin/bash
31
32			$EXE
33
34			cp STDOUT.0000 output.txt
35
36			EOF
37			chmod a+x $RUNIT
38
39			COMMAND="$HERE/$RUNIT"
40
41			# cat << EOF > $HERE"/.cvspass"
42			# /1 :pserver:cvsanon@mitgcm.org:2401/u/gcmpack Ah<Zy=0=
43			# EOF
44	edhill	1.3	TDIR="/SCRATCH/s06/edhill/tmp_"$VENDOR
45	edhill	1.1	if test -e $TDIR ; then
46			rm -rf $TDIR
47			fi
48			mkdir $TDIR
49			cd $TDIR
50			cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co MITgcm
51			# cvs co MITgcm
52			cd MITgcm/verification
53			#OPTFILE="../tools/build_options/linux_ia32_"$VENDOR"+mpi_cg01"
54			OPTFILE="../tools/build_options/linux_ia32_ifc+mpi_cg01"
55	jmc	1.2	./testreport -mpi -of $OPTFILE -command $COMMAND -odir "cg01_"$VENDOR -a 'edhill@mitgcm.org'
56	edhill	1.1
57