Contents of /MITgcm/tools/example_scripts/cg01/cg01_g77_test_mpi

#!/bin/bash
#
# o -N Job Name
#PBS -N eh3_g77
#
#PBS -q four-twelve
#
# o -l ask for 3 nodes, each with the attribute "p4".
#PBS -l nodes=2:p4
#
# o Where to write output
#PBS -e /cluster/home/edhill/err_g77
#PBS -o /cluster/home/edhill/out_g77
#
# o Export all my environment variables to the job
#PBS -V
#

VENDOR=g77
MF="mf_"$VENDOR
RUNIT="runit_"$VENDOR
cd ~edhill
HERE=`pwd`
cat $PBS_NODEFILE > $MF
NCPU=`wc -l $MF | awk '{print $1}'`
MPI="/usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/"$VENDOR"/bin/mpirun.ch_gm"
EXE="$MPI -machinefile $HERE/$MF --gm-kill 5 -v -np $NCPU ./mitgcmuv"

cat << EOF > $RUNIT
#!/bin/bash

$EXE

cp STDOUT.0000 output.txt

EOF
chmod a+x $RUNIT

COMMAND="$HERE/$RUNIT"

# cat << EOF > $HERE"/.cvspass"
# /1 :pserver:cvsanon@mitgcm.org:2401/u/gcmpack Ah<Zy=0=
# EOF
TDIR="/SCRATCH/s06/edhill/tmp_"$VENDOR
if test -e $TDIR ; then
    rm -rf $TDIR
fi
mkdir $TDIR
cd $TDIR
cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co MITgcm
#  cvs co MITgcm
cd MITgcm/verification
OPTFILE="../tools/build_options/linux_ia32_"$VENDOR"+mpi_cg01"
./testreport -mpi -of $OPTFILE -command $COMMAND -odir "cg01_"$VENDOR -a 'edhill@mitgcm.org'
1	#!/bin/bash
2	#
3	# o -N Job Name
4	#PBS -N eh3_g77
5	#
6	#PBS -q four-twelve
7	#
8	# o -l ask for 3 nodes, each with the attribute "p4".
9	#PBS -l nodes=2:p4
10	#
11	# o Where to write output
12	#PBS -e /cluster/home/edhill/err_g77
13	#PBS -o /cluster/home/edhill/out_g77
14	#
15	# o Export all my environment variables to the job
16	#PBS -V
17	#
18
19	VENDOR=g77
20	MF="mf_"$VENDOR
21	RUNIT="runit_"$VENDOR
22	cd ~edhill
23	HERE=`pwd`
24	cat $PBS_NODEFILE > $MF
25	NCPU=`wc -l $MF \| awk '{print $1}'`
26	MPI="/usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/"$VENDOR"/bin/mpirun.ch_gm"
27	EXE="$MPI -machinefile $HERE/$MF --gm-kill 5 -v -np $NCPU ./mitgcmuv"
28
29	cat << EOF > $RUNIT
30	#!/bin/bash
31
32	$EXE
33
34	cp STDOUT.0000 output.txt
35
36	EOF
37	chmod a+x $RUNIT
38
39	COMMAND="$HERE/$RUNIT"
40
41	# cat << EOF > $HERE"/.cvspass"
42	# /1 :pserver:cvsanon@mitgcm.org:2401/u/gcmpack Ah<Zy=0=
43	# EOF
44	TDIR="/SCRATCH/s06/edhill/tmp_"$VENDOR
45	if test -e $TDIR ; then
46	rm -rf $TDIR
47	fi
48	mkdir $TDIR
49	cd $TDIR
50	cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co MITgcm
51	# cvs co MITgcm
52	cd MITgcm/verification
53	OPTFILE="../tools/build_options/linux_ia32_"$VENDOR"+mpi_cg01"
54	./testreport -mpi -of $OPTFILE -command $COMMAND -odir "cg01_"$VENDOR -a 'edhill@mitgcm.org'