| 1 |
#!/bin/bash |
| 2 |
# |
| 3 |
#PBS -q four |
| 4 |
#PBS -N tst_pgi |
| 5 |
#PBS -l nodes=1:ppn=6 |
| 6 |
#PBS -e /mit/jm_c/test_acesgrid/output/tst_pgi.stderr |
| 7 |
#PBS -o /mit/jm_c/test_acesgrid/output/tst_pgi.stdout |
| 8 |
|
| 9 |
# $Header: /u/gcmpack/MITgcm/tools/example_scripts/ACESgrid/test_aces_pgi_mpi,v 1.2 2011/08/16 16:49:01 jmc Exp $ |
| 10 |
# $Name: $ |
| 11 |
|
| 12 |
if test -f /etc/profile.d/modules.sh ; then |
| 13 |
. /etc/profile.d/modules.sh |
| 14 |
fi |
| 15 |
# Note: added "ulimit -s unlimited" in file "~/.bashrc" |
| 16 |
# to pass big test (the 2 fizhi-cs-* test & adjoint tests) with MPI |
| 17 |
|
| 18 |
umask 0022 |
| 19 |
#- to get case insensitive "ls" (and order of tested experiments) |
| 20 |
export LC_ALL="en_US.UTF-8" |
| 21 |
|
| 22 |
#TST_DIR="/home/jmc/test_ACES" |
| 23 |
TST_DIR="/mit/jm_c/test_acesgrid" |
| 24 |
HERE=$TST_DIR/output |
| 25 |
#cd $HERE |
| 26 |
|
| 27 |
sfx='pgi' |
| 28 |
module add pgi |
| 29 |
module add mvapich2 |
| 30 |
OPTFILE="../tools/build_options/linux_amd64_pgf77+mpi" |
| 31 |
#options="-j 2 -MPI 6 -mf $PBS_NODEFILE" |
| 32 |
#EXE="mpirun -machinefile TR_MFILE -v -np TR_NPROC ./mitgcmuv" |
| 33 |
options="-j 2 -MPI 6" |
| 34 |
EXE="mpirun -v -np TR_NPROC ./mitgcmuv" |
| 35 |
|
| 36 |
#- keep a copy of MPI_MFILE: |
| 37 |
cp -p $PBS_NODEFILE $HERE"/mf_"$sfx |
| 38 |
|
| 39 |
checkOut=1 |
| 40 |
#options="$options -nc" ; checkOut=0 |
| 41 |
#options="$options -q" ; checkOut=0 |
| 42 |
|
| 43 |
gcmDIR="MITgcm_$sfx" |
| 44 |
cd $TST_DIR |
| 45 |
#- check for disk space: |
| 46 |
dsp=`df -P . | tail -1 | awk '{print $5}' | sed 's/%$//'` |
| 47 |
if [ $dsp -gt 99 ] ; then |
| 48 |
echo 'Not enough space on this disk => do not run testreport.' |
| 49 |
df . |
| 50 |
exit |
| 51 |
fi |
| 52 |
if [ $checkOut -eq 1 ] ; then |
| 53 |
if test -d $gcmDIR/CVS ; then |
| 54 |
/bin/rm -rf $gcmDIR/verification/??_acesgrid-${sfx}_????????_? |
| 55 |
( cd $gcmDIR/verification ; ../tools/do_tst_2+2 -clean ) |
| 56 |
echo "cvs update of dir $gcmDIR :" |
| 57 |
( cd $gcmDIR ; cvs -q -d :pserver:cvsanon@mitgcm.org:/u/gcmpack update -P -d ) 2>&1 |
| 58 |
RETVAL=$? |
| 59 |
if test "x$RETVAL" != x0 ; then |
| 60 |
echo " cvs update fail (return val=$RETVAL) => exit" |
| 61 |
exit |
| 62 |
fi |
| 63 |
else |
| 64 |
echo "no dir: $gcmDIR/CVS => try a fresh check-out" |
| 65 |
checkOut=2 |
| 66 |
fi |
| 67 |
fi |
| 68 |
if [ $checkOut -eq 2 ] ; then |
| 69 |
if test -e $gcmDIR ; then |
| 70 |
rm -rf $gcmDIR |
| 71 |
fi |
| 72 |
# cvs co MITgcm |
| 73 |
cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co -P -d $gcmDIR MITgcm > /dev/null 2>&1 |
| 74 |
/usr/bin/find $gcmDIR -type d | xargs chmod g+rxs |
| 75 |
/usr/bin/find $gcmDIR -type f | xargs chmod g+r |
| 76 |
fi |
| 77 |
|
| 78 |
#- change dir to $gcmDIR/verification dir: |
| 79 |
if test -e $gcmDIR/verification ; then |
| 80 |
if [ $checkOut -lt 2 ] ; then |
| 81 |
echo " dir $gcmDIR/verification exist" ; fi |
| 82 |
cd $gcmDIR/verification |
| 83 |
else |
| 84 |
echo "no dir $gcmDIR/verification => exit" |
| 85 |
exit |
| 86 |
fi |
| 87 |
|
| 88 |
# avoid hanging in fizhi-cs-32x32x40 (due to I/O problems with g77) |
| 89 |
echo ./testreport $options -of $OPTFILE -command \"$EXE\" -odir acesgrid-$sfx \ |
| 90 |
-skd fizhi-cs-32x32x40 |
| 91 |
./testreport $options -of $OPTFILE -command "$EXE" -odir acesgrid-$sfx \ |
| 92 |
-skd fizhi-cs-32x32x40 |
| 93 |
|
| 94 |
echo '' |
| 95 |
#echo ../tools/do_tst_2+2 -mpi -mf $PBS_NODEFILE -exe \"$EXE\" -o acesgrid-$sfx -a NONE |
| 96 |
#../tools/do_tst_2+2 -mpi -mf $PBS_NODEFILE -exe "$EXE" -o acesgrid-$sfx -a NONE |
| 97 |
echo ../tools/do_tst_2+2 -mpi -exe \"$EXE\" -o acesgrid-$sfx -a NONE |
| 98 |
../tools/do_tst_2+2 -mpi -exe "$EXE" -o acesgrid-$sfx -a NONE |
Parent Directory
| 
Revision Log
| 
Revision Graph