| 1 |
#!/bin/bash |
| 2 |
# |
| 3 |
#PBS -q one |
| 4 |
#PBS -N tst_ifc |
| 5 |
#PBS -l nodes=1:ppn=6 |
| 6 |
#PBS -e /mit/jm_c/test_acesgrid/output/tst_ifc.stderr |
| 7 |
#PBS -o /mit/jm_c/test_acesgrid/output/tst_ifc.stdout |
| 8 |
|
| 9 |
# $Header: /u/gcmpack/MITgcm/tools/example_scripts/ACESgrid/test_aces_ifc_mpi,v 1.12 2015/02/25 14:52:47 jmc Exp $ |
| 10 |
# $Name: $ |
| 11 |
|
| 12 |
if test -f /etc/profile.d/modules.sh ; then |
| 13 |
. /etc/profile.d/modules.sh |
| 14 |
fi |
| 15 |
# Note: added "ulimit -s unlimited" in file "~/.bashrc" |
| 16 |
# to pass big test (the 2 fizhi-cs-* test & adjoint tests) with MPI |
| 17 |
|
| 18 |
umask 0022 |
| 19 |
#- to get case insensitive "ls" (and order of tested experiments) |
| 20 |
export LC_ALL="en_US.UTF-8" |
| 21 |
echo " running on: "`hostname` |
| 22 |
|
| 23 |
dNam='acesgrid' |
| 24 |
HERE="$HOME/test_$dNam" |
| 25 |
OUTP="$HERE/output"; SavD="$HERE/send" |
| 26 |
SEND="ssh login $SavD/mpack" |
| 27 |
TST_DIR="/scratch/jm_c/test_$dNam" |
| 28 |
|
| 29 |
if test -d $TST_DIR ; then |
| 30 |
echo "start from TST_DIR='$TST_DIR' at: "`date` |
| 31 |
else |
| 32 |
if test ! -d /scratch/jm_c ; then mkdir /scratch/jm_c ; fi |
| 33 |
if test ! -d $TST_DIR ; then mkdir $TST_DIR ; fi |
| 34 |
if test ! -d $TST_DIR ; then |
| 35 |
echo "ERROR: Can't create directory \"$TST_DIR\"" |
| 36 |
exit 1 |
| 37 |
fi |
| 38 |
echo "start in new dir TST_DIR='$TST_DIR' at: "`date` |
| 39 |
fi |
| 40 |
|
| 41 |
sfx='ifc' |
| 42 |
addExp='global_ocean.gm_k3d global_ocean.gm_res' |
| 43 |
export MODULEPATH="/mit/jahn/usr/modulefiles:${MODULEPATH}" |
| 44 |
module add intel/2013.0.079 |
| 45 |
OPTFILE="../tools/build_options/linux_amd64_ifort11" |
| 46 |
options="-j 2 -MPI 6" |
| 47 |
#- need this to get "staf": |
| 48 |
export PATH="$PATH:$HOME/bin" |
| 49 |
|
| 50 |
dInWeek=`date +%a` |
| 51 |
#if test "x$dInWeek" = xSun ; then options="$options -fast" ; fi |
| 52 |
|
| 53 |
checkOut=2 |
| 54 |
#options="$options -nc" ; checkOut=1 |
| 55 |
#options="$options -q" ; checkOut=0 |
| 56 |
|
| 57 |
#- keep a copy of MPI_MFILE: |
| 58 |
cp -p $PBS_NODEFILE $OUTP"/mf_"$sfx |
| 59 |
|
| 60 |
cvsArg="-d :pserver:cvsanon@mitgcm.org:/u/gcmpack" |
| 61 |
gcmDIR="MITgcm_$sfx" |
| 62 |
cd $TST_DIR |
| 63 |
#- check for disk space: relative space (99%) or absolute (10.G): |
| 64 |
dsp=`df -P . | tail -1 | awk '{print $5}' | sed 's/%$//'` |
| 65 |
if [ $dsp -gt 99 ] ; then |
| 66 |
#dsp=`df -P . | tail -1 | awk '{print $4}'` |
| 67 |
#if [ $dsp -le 100000000 ] ; then |
| 68 |
echo 'Not enough space on this disk => do not run testreport.' |
| 69 |
df . |
| 70 |
exit |
| 71 |
fi |
| 72 |
if [ $checkOut -eq 1 ] ; then |
| 73 |
if test -d $gcmDIR/CVS ; then |
| 74 |
#- remove previous output tar files and tar & remove previous output-dir |
| 75 |
/bin/rm -f $gcmDIR/verification/??_${dNam}-${sfx}_????????_?.tar.gz |
| 76 |
( cd $gcmDIR/verification |
| 77 |
listD=`ls -1 -d ??_${dNam}-${sfx}_????????_? 2> /dev/null` |
| 78 |
for dd in $listD |
| 79 |
do |
| 80 |
if test -d $dd ; then |
| 81 |
tar -cf ${dd}".tar" $dd > /dev/null 2>&1 && gzip ${dd}".tar" && /bin/rm -rf $dd |
| 82 |
RETVAL=$? |
| 83 |
if test "x$RETVAL" != x0 ; then |
| 84 |
echo "ERROR in tar+gzip prev outp-dir: $dd" |
| 85 |
echo " on '"`hostname`"' (return val=$RETVAL) but continue" |
| 86 |
fi |
| 87 |
fi |
| 88 |
done ) |
| 89 |
( cd $gcmDIR/verification ; ../tools/do_tst_2+2 -clean ) |
| 90 |
echo ' remove all Makefile_syntax and do "cvs update -P -d"' |
| 91 |
( cd $gcmDIR/verification ; rm -f */build/Makefile_syntax ) |
| 92 |
# echo "cvs update of dir $gcmDIR :" |
| 93 |
( cd $gcmDIR ; cvs -q $cvsArg update -P -d ) |
| 94 |
RETVAL=$? |
| 95 |
if test "x$RETVAL" != x0 ; then |
| 96 |
echo "cvs update on '"`hostname`"' fail (return val=$RETVAL) => exit" |
| 97 |
exit |
| 98 |
fi |
| 99 |
else |
| 100 |
echo "no dir: $gcmDIR/CVS => try a fresh check-out" |
| 101 |
checkOut=2 |
| 102 |
fi |
| 103 |
fi |
| 104 |
if [ $checkOut -eq 2 ] ; then |
| 105 |
if test -e $gcmDIR ; then |
| 106 |
rm -rf $gcmDIR |
| 107 |
fi |
| 108 |
# cvs co MITgcm |
| 109 |
cvs $cvsArg co -P -d $gcmDIR MITgcm > /dev/null |
| 110 |
RETVAL=$? |
| 111 |
if test "x$RETVAL" != x0 ; then |
| 112 |
echo "cvs co on '"`hostname`"' fail (return val=$RETVAL) => exit" |
| 113 |
exit |
| 114 |
fi |
| 115 |
if test -d $gcmDIR/verification ; then |
| 116 |
for exp2add in $addExp ; do |
| 117 |
echo " add dir: $exp2add (from Contrib:verification_other)" |
| 118 |
( cd $gcmDIR/verification ; cvs $cvsArg co -P -d $exp2add \ |
| 119 |
MITgcm_contrib/verification_other/$exp2add > /dev/null ) |
| 120 |
done |
| 121 |
/usr/bin/find $gcmDIR -type d | xargs chmod g+rxs |
| 122 |
/usr/bin/find $gcmDIR -type f | xargs chmod g+r |
| 123 |
fi |
| 124 |
fi |
| 125 |
|
| 126 |
#- change dir to $gcmDIR/verification dir: |
| 127 |
if test -e $gcmDIR/verification ; then |
| 128 |
if [ $checkOut -lt 2 ] ; then |
| 129 |
echo " dir $gcmDIR/verification exist" ; fi |
| 130 |
cd $gcmDIR/verification |
| 131 |
else |
| 132 |
echo "no dir: $gcmDIR/verification => exit" |
| 133 |
exit |
| 134 |
fi |
| 135 |
|
| 136 |
if test "x$dInWeek" = xSun ; then |
| 137 |
options="$options -fast" |
| 138 |
|
| 139 |
echo ./testreport $options -of $OPTFILE -odir ${dNam}-$sfx \ |
| 140 |
-send \"$SEND\" -sd $SavD -a jmc@mitgcm.org |
| 141 |
./testreport $options -of $OPTFILE -odir ${dNam}-$sfx \ |
| 142 |
-send "$SEND" -sd $SavD -a jmc@mitgcm.org |
| 143 |
|
| 144 |
echo '' |
| 145 |
echo ../tools/do_tst_2+2 -mpi -o ${dNam}-$sfx \ |
| 146 |
-send \"$SEND\" -sd $SavD -a jmc@mitgcm.org |
| 147 |
../tools/do_tst_2+2 -mpi -o ${dNam}-$sfx \ |
| 148 |
-send "$SEND" -sd $SavD -a jmc@mitgcm.org |
| 149 |
|
| 150 |
else |
| 151 |
options="$options -devel" |
| 152 |
|
| 153 |
echo ./testreport $options -of $OPTFILE \ |
| 154 |
-repl_mk do_make_syntax.sh -obj -dd |
| 155 |
./testreport $options -of $OPTFILE \ |
| 156 |
-repl_mk do_make_syntax.sh -obj -dd 2>&1 |
| 157 |
|
| 158 |
echo '' |
| 159 |
echo ./testreport $options -of $OPTFILE -odir ${dNam}-$sfx \ |
| 160 |
-q -send \"$SEND\" -sd $SavD -a jmc@mitgcm.org |
| 161 |
./testreport $options -of $OPTFILE -odir ${dNam}-$sfx \ |
| 162 |
-q -send "$SEND" -sd $SavD -a jmc@mitgcm.org |
| 163 |
|
| 164 |
echo '' |
| 165 |
echo ../tools/do_tst_2+2 -mpi -o ${dNam}-$sfx \ |
| 166 |
-send \"$SEND\" -sd $SavD -a jmc@mitgcm.org |
| 167 |
../tools/do_tst_2+2 -mpi -o ${dNam}-$sfx \ |
| 168 |
-send "$SEND" -sd $SavD -a jmc@mitgcm.org |
| 169 |
|
| 170 |
fi |
Parent Directory
| 
Revision Log
| 
Revision Graph