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jmc |
1.1 |
#!/bin/bash |
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# |
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#PBS -q one |
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#PBS -N tst_ifc |
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#PBS -l nodes=1:ppn=6 |
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#PBS -e /data/jm_c/test_acesgrid/output/tst_ifc.stderr |
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#PBS -o /data/jm_c/test_acesgrid/output/tst_ifc.stdout |
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# $Header: /u/gcmpack/MITgcm/tools/example_scripts/ACESgrid/test_aces_adm_mpi,v 1.14 2013/09/23 15:44:19 jmc Exp $ |
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# $Name: $ |
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if test -f /etc/profile.d/modules.sh ; then |
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. /etc/profile.d/modules.sh |
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fi |
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# Note: added "ulimit -s unlimited" in file "~/.bashrc" |
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# to pass big test (the 2 fizhi-cs-* test & adjoint tests) with MPI |
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dNam='acesgrid' |
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TST_DIR="/data/jm_c/test_$dNam" |
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echo "start from TST_DIR='$TST_DIR' at: "`date` |
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umask 0022 |
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#- to get case insensitive "ls" (and order of tested experiments) |
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export LC_ALL="en_US.UTF-8" |
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HERE=$TST_DIR/output |
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sfx='ifc' |
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export MODULEPATH="/mit/jahn/usr/modulefiles:${MODULEPATH}" |
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module add intel |
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#- with mpich2, needs module torque to run |
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module add torque |
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OPTFILE="../tools/build_options/linux_amd64_ifort11" |
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options="-j 2 -MPI 6" |
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#- need this to get "staf": |
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#export PATH="$PATH:$HOME/bin" |
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dAlt=`date +%j` ; dAlt=`expr $dAlt % 2` |
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if [ $dAlt -eq 1 ] ; then options="$options -fast" ; fi |
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#- keep a copy of MPI_MFILE: |
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cp -p $PBS_NODEFILE $HERE"/mf_"$sfx |
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checkOut=1 |
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#options="$options -nc" ; checkOut=0 |
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#options="$options -q" ; checkOut=0 |
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addExp=0 |
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cvsArg="-d :pserver:cvsanon@mitgcm.org:/u/gcmpack" |
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gcmDIR="MITgcm_$sfx" |
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cd $TST_DIR |
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#- check for disk space: relative space (99%) or absolute (10.G): |
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#dsp=`df -P . | tail -1 | awk '{print $5}' | sed 's/%$//'` |
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#if [ $dsp -gt 99 ] ; then |
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dsp=`df -P . | tail -1 | awk '{print $4}'` |
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if [ $dsp -le 10000000 ] ; then |
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echo 'Not enough space on this disk => do not run testreport.' |
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df . |
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exit |
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fi |
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if [ $checkOut -eq 1 ] ; then |
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if test -d $gcmDIR/CVS ; then |
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#- remove previous output tar files and tar & remove previous output-dir |
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/bin/rm -f $gcmDIR/verification/??_${dNam}-${sfx}_????????_?.tar.gz |
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( cd $gcmDIR/verification |
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listD=`ls -1 -d ??_${dNam}-${sfx}_????????_? 2> /dev/null` |
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for dd in $listD |
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do |
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if test -d $dd ; then |
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tar -cf ${dd}".tar" $dd > /dev/null 2>&1 && gzip ${dd}".tar" && /bin/rm -rf $dd |
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RETVAL=$? |
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if test "x$RETVAL" != x0 ; then |
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echo "ERROR in tar+gzip prev outp-dir: $dd" |
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echo " on '"`hostname`"' (return val=$RETVAL) but continue" |
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fi |
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fi |
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done ) |
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( cd $gcmDIR/verification ; ../tools/do_tst_2+2 -clean ) |
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echo "cvs update of dir $gcmDIR :" |
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( cd $gcmDIR ; cvs -q $cvsArg update -P -d ) 2>&1 |
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RETVAL=$? |
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if test "x$RETVAL" != x0 ; then |
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echo "cvs update on '"`hostname`"' fail (return val=$RETVAL) => exit" |
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exit |
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fi |
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else |
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echo "no dir: $gcmDIR/CVS => try a fresh check-out" |
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checkOut=2 |
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fi |
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fi |
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if [ $checkOut -eq 2 ] ; then |
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if test -e $gcmDIR ; then |
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rm -rf $gcmDIR |
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fi |
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# cvs co MITgcm |
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cvs $cvsArg co -P -d $gcmDIR MITgcm > /dev/null 2>&1 |
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if [ $addExp -ge 1 ]; then |
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echo " add dir: offline_cheapaml (from Contrib:verification_other)" |
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( cd $gcmDIR/verification ; cvs $cvsArg co -P -d offline_cheapaml \ |
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MITgcm_contrib/verification_other/offline_cheapaml > /dev/null 2>&1 ) |
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fi |
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/usr/bin/find $gcmDIR -type d | xargs chmod g+rxs |
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/usr/bin/find $gcmDIR -type f | xargs chmod g+r |
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fi |
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#- change dir to $gcmDIR/verification dir: |
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if test -e $gcmDIR/verification ; then |
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if [ $checkOut -lt 2 ] ; then |
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echo " dir $gcmDIR/verification exist" ; fi |
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cd $gcmDIR/verification |
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else |
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echo "no dir: $gcmDIR/verification => exit" |
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exit |
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fi |
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SavD="$HOME/test_$dNam/send" |
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SEND="ssh login $SavD/mpack" |
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echo ./testreport $options -of $OPTFILE -odir ${dNam}-$sfx \ |
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-send \"$SEND\" -sd $SavD -a jmc@mitgcm.org |
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./testreport $options -of $OPTFILE -odir ${dNam}-$sfx \ |
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-send "$SEND" -sd $SavD -a jmc@mitgcm.org |
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echo '' |
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echo ../tools/do_tst_2+2 -mpi -o ${dNam}-$sfx \ |
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-send \"$SEND\" -sd $SavD -a jmc@mitgcm.org |
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../tools/do_tst_2+2 -mpi -o ${dNam}-$sfx \ |
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-send "$SEND" -sd $SavD -a jmc@mitgcm.org |
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