Annotation of /MITgcm/tools/example_scripts/ACESgrid/itrda_gnu_test_mpi

#!/bin/bash
#
#PBS -q long
#PBS -N eh3_g77
#PBS -l nodes=2:ppn=1
#PBS -e /home/edhill/test_outp/eh3_gnu.stderr
#PBS -o /home/edhill/test_outp/eh3_gnu.stdout
#PBS -V
 
if test -f /etc/profile.d/modules.sh ; then
    . /etc/profile.d/modules.sh
fi
module add mpich/gnu

HERE='/home/edhill/test_outp'
cd $HERE

FC=g77
RUNIT=$HERE"/runit_"$FC
MF=$HERE"/mf_"$FC
cat $PBS_NODEFILE > $MF
NCPU=`wc -l $MF | awk '{print $1}'`
EXE="mpirun -machinefile $MF -v -np $NCPU ./mitgcmuv"

cat << EOF > $RUNIT
#!/bin/bash

$EXE

cp STDOUT.0000 output.txt

EOF
chmod a+x $RUNIT

# cat << EOF > $HERE"/.cvspass"
# /1 :pserver:cvsanon@mitgcm.org:2401/u/gcmpack Ah<Zy=0=
# EOF
umask 0022
TDIR="/net/ds-01/scratch-5/edhill/tmp_"$FC
if test -e $TDIR ; then
    rm -rf $TDIR
fi
mkdir $TDIR
cd $TDIR
cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co MITgcm > /dev/null 2>&1
#  cvs co MITgcm
/usr/bin/find $TDIR -type d | xargs chmod g+rxs
/usr/bin/find $TDIR -type f | xargs chmod g+r

cd MITgcm/verification
OPTFILE="../tools/build_options/linux_ia32_"$FC"+mpi_itrda"
# ./testreport -j 2 -mpi -of $OPTFILE -command $RUNIT -a 'edhill@mitgcm.org'
./testreport -j 2 -mpi -of $OPTFILE -command $RUNIT

1	edhill	1.1	#!/bin/bash
2			#
3	edhill	1.3	#PBS -q long
4	edhill	1.1	#PBS -N eh3_g77
5	edhill	1.5	#PBS -l nodes=2:ppn=1
6	edhill	1.1	#PBS -e /home/edhill/test_outp/eh3_gnu.stderr
7			#PBS -o /home/edhill/test_outp/eh3_gnu.stdout
8			#PBS -V
9
10			if test -f /etc/profile.d/modules.sh ; then
11			. /etc/profile.d/modules.sh
12			fi
13			module add mpich/gnu
14
15			HERE='/home/edhill/test_outp'
16			cd $HERE
17
18			FC=g77
19			RUNIT=$HERE"/runit_"$FC
20			MF=$HERE"/mf_"$FC
21	edhill	1.5	cat $PBS_NODEFILE > $MF
22	edhill	1.1	NCPU=`wc -l $MF \| awk '{print $1}'`
23			EXE="mpirun -machinefile $MF -v -np $NCPU ./mitgcmuv"
24
25			cat << EOF > $RUNIT
26			#!/bin/bash
27
28			$EXE
29
30			cp STDOUT.0000 output.txt
31
32			EOF
33			chmod a+x $RUNIT
34
35			# cat << EOF > $HERE"/.cvspass"
36			# /1 :pserver:cvsanon@mitgcm.org:2401/u/gcmpack Ah<Zy=0=
37			# EOF
38	edhill	1.5	umask 0022
39	edhill	1.2	TDIR="/net/ds-01/scratch-5/edhill/tmp_"$FC
40	edhill	1.1	if test -e $TDIR ; then
41			rm -rf $TDIR
42			fi
43			mkdir $TDIR
44			cd $TDIR
45			cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co MITgcm > /dev/null 2>&1
46			# cvs co MITgcm
47	edhill	1.5	/usr/bin/find $TDIR -type d \| xargs chmod g+rxs
48			/usr/bin/find $TDIR -type f \| xargs chmod g+r
49
50	edhill	1.1	cd MITgcm/verification
51			OPTFILE="../tools/build_options/linux_ia32_"$FC"+mpi_itrda"
52			# ./testreport -j 2 -mpi -of $OPTFILE -command $RUNIT -a 'edhill@mitgcm.org'
53			./testreport -j 2 -mpi -of $OPTFILE -command $RUNIT
54