1 |
#!/bin/bash |
2 |
# |
3 |
#PBS -q four-twelve |
4 |
#PBS -N tst_tuv |
5 |
#PBS -l nodes=1:ppn=2 |
6 |
#PBS -e /home/jmc/test_aces/output/tst_tuv.stderr |
7 |
#PBS -o /home/jmc/test_aces/output/tst_tuv.stdout |
8 |
|
9 |
# $Header: /u/gcmpack/MITgcm/tools/example_scripts/ACESgrid/aces_test_op64_tuv,v 1.25 2013/08/12 19:29:12 jmc Exp $ |
10 |
# $Name: $ |
11 |
|
12 |
# ACES-grid PBS-batch script: test using open64 + "Trap Un-initialised Var." option |
13 |
|
14 |
if test -f /etc/profile.d/modules.sh ; then |
15 |
. /etc/profile.d/modules.sh |
16 |
fi |
17 |
# Note: added "ulimit -s unlimited" in file "~/.bashrc" |
18 |
# to pass big test (the 2 fizhi-cs-* test & adjoint tests) with MPI |
19 |
|
20 |
dNam='aces' |
21 |
TST_DIR="$HOME/test_$dNam" |
22 |
echo "start from TST_DIR='$TST_DIR' at: "`date` |
23 |
|
24 |
umask 0022 |
25 |
#- to get case insensitive "ls" (and order of tested experiments) |
26 |
export LC_ALL="en_US.UTF-8" |
27 |
|
28 |
HERE=$TST_DIR/output |
29 |
sfx='tuv' |
30 |
module add open64 |
31 |
export NETCDF_ROOT='/usr/local/pkg/netcdf/netcdf-3.5.1/g77' |
32 |
OPTFILE="../tools/build_options/linux_ia32_open64" |
33 |
options='-j 2 -devel -gsl' |
34 |
export GSL_IEEE_MODE=double-precision,mask-underflow,mask-denormalized |
35 |
|
36 |
#- keep a copy of MPI_MFILE: |
37 |
cp -p $PBS_NODEFILE $HERE"/mf_"$sfx |
38 |
|
39 |
checkOut=1 ; options="$options -do" |
40 |
#options="$options -nc" ; checkOut=0 |
41 |
#options="$options -q" ; checkOut=0 |
42 |
|
43 |
addExp=0 |
44 |
cvsArg="-d :pserver:cvsanon@mitgcm.org:/u/gcmpack" |
45 |
gcmDIR="MITgcm_$sfx" |
46 |
cd $TST_DIR |
47 |
#- check for disk space: relative space (99%) or absolute (1.G): |
48 |
#dsp=`df -P . | tail -1 | awk '{print $5}' | sed 's/%$//'` |
49 |
#if [ $dsp -gt 99 ] ; then |
50 |
dsp=`df -P . | tail -1 | awk '{print $4}'` |
51 |
if [ $dsp -le 1000000 ] ; then |
52 |
echo 'Not enough space on this disk => do not run testreport.' |
53 |
df . |
54 |
exit |
55 |
fi |
56 |
if [ $checkOut -eq 1 ] ; then |
57 |
if test -d $gcmDIR/CVS ; then |
58 |
#- remove previous output tar files and tar & remove previous output-dir |
59 |
/bin/rm -f $gcmDIR/verification/??_${dNam}-${sfx}_????????_?.tar.gz |
60 |
( cd $gcmDIR/verification |
61 |
listD=`ls -1 -d ??_${dNam}-${sfx}_????????_? 2> /dev/null` |
62 |
for dd in $listD |
63 |
do |
64 |
if test -d $dd ; then |
65 |
tar -cf ${dd}".tar" $dd > /dev/null 2>&1 && gzip ${dd}".tar" && /bin/rm -rf $dd |
66 |
RETVAL=$? |
67 |
if test "x$RETVAL" != x0 ; then |
68 |
echo "ERROR in tar+gzip prev outp-dir: $dd" |
69 |
echo " on '"`hostname`"' (return val=$RETVAL) but continue" |
70 |
fi |
71 |
fi |
72 |
done ) |
73 |
# ( cd $gcmDIR/verification ; ../tools/do_tst_2+2 -clean ) |
74 |
#- clean-up previous TAF output temp dir (generated on old system like here) |
75 |
# ( cd $gcmDIR/verification ; /bin/rm -rf */build/PaxHeaders.[0-9]* ) |
76 |
echo "cvs update of dir $gcmDIR :" |
77 |
( cd $gcmDIR ; cvs -q $cvsArg update -P -d ) 2>&1 |
78 |
RETVAL=$? |
79 |
if test "x$RETVAL" != x0 ; then |
80 |
echo "cvs update on '"`hostname`"' fail (return val=$RETVAL) => exit" |
81 |
exit |
82 |
fi |
83 |
else |
84 |
echo "no dir: $gcmDIR/CVS => try a fresh check-out" |
85 |
checkOut=2 |
86 |
fi |
87 |
fi |
88 |
if [ $checkOut -eq 2 ] ; then |
89 |
if test -e $gcmDIR ; then |
90 |
rm -rf $gcmDIR |
91 |
fi |
92 |
# cvs co MITgcm |
93 |
cvs $cvsArg co -P -d $gcmDIR MITgcm > /dev/null 2>&1 |
94 |
if [ $addExp -ge 1 ]; then |
95 |
echo " add dir: offline_cheapaml (from Contrib:verification_other)" |
96 |
( cd $gcmDIR/verification ; cvs $cvsArg co -P -d offline_cheapaml \ |
97 |
MITgcm_contrib/verification_other/offline_cheapaml > /dev/null 2>&1 ) |
98 |
fi |
99 |
/usr/bin/find $gcmDIR -type d | xargs chmod g+rxs |
100 |
/usr/bin/find $gcmDIR -type f | xargs chmod g+r |
101 |
fi |
102 |
|
103 |
#- change dir to $gcmDIR/verification dir: |
104 |
if test -e $gcmDIR/verification ; then |
105 |
if [ $checkOut -lt 2 ] ; then |
106 |
echo " dir $gcmDIR/verification exist" ; fi |
107 |
cd $gcmDIR/verification |
108 |
else |
109 |
echo "no dir: $gcmDIR/verification => exit" |
110 |
exit |
111 |
fi |
112 |
|
113 |
SavD="$HOME/test_$dNam/send" |
114 |
SEND="ssh geo $SavD/mpack" |
115 |
|
116 |
echo ./testreport $options -of $OPTFILE -odir ${dNam}-$sfx \ |
117 |
-send \"$SEND\" -sd $SavD -a jmc@mitgcm.org |
118 |
./testreport $options -of $OPTFILE -odir ${dNam}-$sfx \ |
119 |
-send "$SEND" -sd $SavD -a jmc@mitgcm.org |
120 |
|
121 |
#echo -n 'run ./testreport -clean ...' |
122 |
#./testreport -clean > /dev/null 2>&1 |
123 |
#echo -n ' done at: ' ; date |