/[MITgcm]/MITgcm/tools/example_scripts/ACESgrid/aces_test_ifc_mpi
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revision 1.20 by jmc, Thu Sep 8 13:39:59 2011 UTC revision 1.29 by jmc, Tue Aug 20 18:53:11 2013 UTC
# Line 3  Line 3 
3  #PBS -q four-twelve  #PBS -q four-twelve
4  #PBS -N tst_ifc  #PBS -N tst_ifc
5  #PBS -l nodes=3:ppn=2  #PBS -l nodes=3:ppn=2
6  #PBS -e /home/jmc/test_ACES/output/tst_ifc.stderr  #PBS -e /home/jmc/test_aces/output/tst_ifc.stderr
7  #PBS -o /home/jmc/test_ACES/output/tst_ifc.stdout  #PBS -o /home/jmc/test_aces/output/tst_ifc.stdout
8    
9  # $Header$  # $Header$
10  # $Name$  # $Name$
# Line 17  fi Line 17  fi
17  # Note: added "ulimit -s unlimited" in file "~/.bashrc"  # Note: added "ulimit -s unlimited" in file "~/.bashrc"
18  # to pass big test (the 2 fizhi-cs-* test & adjoint tests) with MPI  # to pass big test (the 2 fizhi-cs-* test & adjoint tests) with MPI
19    
20    dNam='aces'
21    TST_DIR="$HOME/test_$dNam"
22    echo "start from TST_DIR='$TST_DIR' at: "`date`
23    
24  umask 0022  umask 0022
25  #- to get case insensitive "ls" (and order of tested experiments)  #- to get case insensitive "ls" (and order of tested experiments)
26  export LC_ALL="en_US.UTF-8"  export LC_ALL="en_US.UTF-8"
27    
 TST_DIR="/home/jmc/test_ACES"  
28  HERE=$TST_DIR/output  HERE=$TST_DIR/output
 #cd $HERE  
   
29  sfx='ifc'  sfx='ifc'
30   module add mpich/intel   module add mpich/intel
31   module add netcdf/3.6.1/icc   module add netcdf/3.6.1/icc
# Line 37  sfx='ifc' Line 38  sfx='ifc'
38  #- keep a copy of MPI_MFILE:  #- keep a copy of MPI_MFILE:
39  cp -p $PBS_NODEFILE $HERE"/mf_"$sfx  cp -p $PBS_NODEFILE $HERE"/mf_"$sfx
40    
41  checkOut=1  checkOut=1 ; #options="$options -do"
42  #options="$options -nc" ; checkOut=0  #options="$options -nc" ; checkOut=0
43  #options="$options -q"  ; checkOut=0  #options="$options -q"  ; checkOut=0
44    
45    addExp=0
46    cvsArg="-d :pserver:cvsanon@mitgcm.org:/u/gcmpack"
47  gcmDIR="MITgcm_$sfx"  gcmDIR="MITgcm_$sfx"
48  cd $TST_DIR  cd $TST_DIR
49  #- check for disk space:  #- check for disk space: relative space (99%) or absolute (1.G):
50  dsp=`df -P . | tail -1 | awk '{print $5}' | sed 's/%$//'`  #dsp=`df -P . | tail -1 | awk '{print $5}' | sed 's/%$//'`
51  if [ $dsp -gt 99 ] ; then  #if [ $dsp -gt 99 ] ; then
52    dsp=`df -P . | tail -1 | awk '{print $4}'`
53    if [ $dsp -le 1000000 ] ; then
54    echo 'Not enough space on this disk => do not run testreport.'    echo 'Not enough space on this disk => do not run testreport.'
55    df .    df .
56    exit    exit
57  fi  fi
58  if [ $checkOut -eq 1 ] ; then  if [ $checkOut -eq 1 ] ; then
59    if test -d $gcmDIR/CVS ; then    if test -d $gcmDIR/CVS ; then
60      /bin/rm -rf $gcmDIR/verification/??_aces-${sfx}_????????_?  #- remove previous output tar files and tar & remove previous output-dir
61        /bin/rm -f $gcmDIR/verification/??_${dNam}-${sfx}_????????_?.tar.gz
62        ( cd $gcmDIR/verification
63          listD=`ls -1 -d ??_${dNam}-${sfx}_????????_? 2> /dev/null`
64          for dd in $listD
65          do
66            if test -d $dd ; then
67              tar -cf ${dd}".tar" $dd > /dev/null 2>&1 && gzip ${dd}".tar" && /bin/rm -rf $dd
68              RETVAL=$?
69              if test "x$RETVAL" != x0 ; then
70                 echo "ERROR in tar+gzip prev outp-dir: $dd"
71                 echo " on '"`hostname`"' (return val=$RETVAL) but continue"
72              fi
73            fi
74          done )
75      ( cd $gcmDIR/verification ; ../tools/do_tst_2+2 -clean )      ( cd $gcmDIR/verification ; ../tools/do_tst_2+2 -clean )
76    #- clean-up previous TAF output temp dir (generated on old system like here)
77    #   ( cd $gcmDIR/verification ; /bin/rm -rf  */build/PaxHeaders.[0-9]* )
78      echo "cvs update of dir $gcmDIR :"      echo "cvs update of dir $gcmDIR :"
79      ( cd $gcmDIR ; cvs -q -d :pserver:cvsanon@mitgcm.org:/u/gcmpack update -P -d ) 2>&1      ( cd $gcmDIR ; cvs -q $cvsArg update -P -d ) 2>&1
80      RETVAL=$?      RETVAL=$?
81      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
82         echo "cvs update on '"`hostname`"' fail (return val=$RETVAL) => exit"         echo "cvs update on '"`hostname`"' fail (return val=$RETVAL) => exit"
# Line 71  if [ $checkOut -eq 2 ] ; then Line 92  if [ $checkOut -eq 2 ] ; then
92       rm -rf $gcmDIR       rm -rf $gcmDIR
93    fi    fi
94  # cvs co MITgcm  # cvs co MITgcm
95    cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co -P -d $gcmDIR MITgcm > /dev/null 2>&1    cvs $cvsArg co -P -d $gcmDIR MITgcm > /dev/null 2>&1
96      if [ $addExp -ge 1 ]; then
97       echo " add dir: offline_cheapaml (from Contrib:verification_other)"
98       ( cd $gcmDIR/verification ; cvs $cvsArg co -P -d offline_cheapaml \
99                      MITgcm_contrib/verification_other/offline_cheapaml > /dev/null 2>&1 )
100      fi
101    /usr/bin/find $gcmDIR -type d | xargs chmod g+rxs    /usr/bin/find $gcmDIR -type d | xargs chmod g+rxs
102    /usr/bin/find $gcmDIR -type f | xargs chmod g+r    /usr/bin/find $gcmDIR -type f | xargs chmod g+r
103  fi  fi
# Line 86  else Line 112  else
112    exit    exit
113  fi  fi
114    
115  echo ./testreport $options -of $OPTFILE -command \"$EXE\" -odir aces-$sfx  SavD="$HOME/test_$dNam/send"
116  ./testreport $options -of $OPTFILE -command "$EXE" -odir aces-$sfx  SEND="ssh geo $SavD/mpack"
117    
118    echo ./testreport $options -of $OPTFILE -command \"$EXE\" -odir ${dNam}-$sfx \
119      -send \"$SEND\" -sd $SavD -a jmc@mitgcm.org
120    ./testreport $options -of $OPTFILE -command "$EXE" -odir ${dNam}-$sfx \
121      -send "$SEND" -sd $SavD -a jmc@mitgcm.org
122    
123  echo ''  echo ''
124  echo ../tools/do_tst_2+2 -mpi -mf $PBS_NODEFILE -exe \"$EXE\" -o aces-$sfx -a NONE  #echo ../tools/do_tst_2+2 -mpi -mf $PBS_NODEFILE -exe \"$EXE\" -o ${dNam}-$sfx -a NONE
125  ../tools/do_tst_2+2 -mpi -mf $PBS_NODEFILE -exe "$EXE" -o aces-$sfx -a NONE  #../tools/do_tst_2+2 -mpi -mf $PBS_NODEFILE -exe "$EXE" -o ${dNam}-$sfx -a NONE
126    echo ../tools/do_tst_2+2 -mpi -mf $PBS_NODEFILE -exe \"$EXE\" -o ${dNam}-$sfx \
127      -send \"$SEND\" -sd $SavD -a jmc@mitgcm.org
128    ../tools/do_tst_2+2 -mpi -mf $PBS_NODEFILE -exe "$EXE" -o ${dNam}-$sfx \
129      -send "$SEND" -sd $SavD -a jmc@mitgcm.org
130    
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