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#! /usr/bin/env bash |
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|
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# $Header: /u/gcmpack/MITgcm/tools/example_scripts/ACESgrid/aces_test_all,v 1.14 2010/04/01 15:46:03 jmc Exp $ |
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# $Name: $ |
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|
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# action =2 : submit test jobs ; =1 : get jobs output ; =3 : do both |
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case $1 in |
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'-subOnly') action=2 ; shift ;; |
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'-getOnly') action=1 ; shift ;; |
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'-sub+get') action=3 ; shift ;; |
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*) action=3 ;; |
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esac |
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#echo "action= $action , Arg= $# " |
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|
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echo -n '-- Starting: ' |
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date |
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start=`date +%Y%m%d` |
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|
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if test $# = 0 |
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then |
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tst_list='gnu ifc pgi adm mp2 mth tuv' |
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else |
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tst_list=$* |
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fi |
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|
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. /etc/profile.d/modules.sh |
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module list > ~/tmp/.module_list 2>&1 |
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|
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# QSUB="/usr/local/bin/qsub" |
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# QSTAT="/usr/local/bin/qstat" |
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QSUB=qsub |
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QSTAT=qstat |
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TST_DIR="/home/jmc/test_ACES" |
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MPACK="MITgcm_tools/mpack-1.6/mpack" |
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SUB_DIR="MITgcm_tools/example_scripts/ACESgrid" |
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|
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LOG_FIL="$TST_DIR/output/tst_all.log" |
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rm -f $LOG_FIL |
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|
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cd $TST_DIR |
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|
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nbtst=0 |
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for i in $tst_list |
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do |
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sfx=`echo ${i}"_mpi" | sed 's/mth_mpi/ifc_mth/' | sed 's/tuv_mpi/op64_tuv/' | sed 's/mp2_mpi/mp2_mth/'` |
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if test -f $SUB_DIR/aces_test_$sfx ; then |
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JOB="tst_"$i |
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job_exist=`$QSTAT -a | grep $USER | grep $JOB | wc -l` |
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if [ $action -ge 2 ] ; then |
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#-- to submit job |
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if test "x_$job_exist" = x_0 ; then |
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$QSUB $SUB_DIR/aces_test_$sfx |
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eval M_$i='submitted' |
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nbtst=`expr $nbtst + 1` |
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else |
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echo $JOB |
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$QSTAT -a | grep $USER | grep $JOB |
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echo 'job already exist => skip this test' |
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eval M_$i='skipped' |
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fi |
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else |
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#-- to get outp back: |
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if test "x_$job_exist" = x_0 ; then |
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echo -n 'did not find any job: ' |
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echo $JOB |
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eval M_$i='skipped' |
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else |
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echo -n 'found a job: ' |
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echo $JOB |
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$QSTAT -a | grep $USER | grep $JOB |
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eval M_$i='submitted' |
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nbtst=`expr $nbtst + 1` |
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fi |
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fi |
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else |
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echo 'no file:' aces_test_$sfx 'to submit' |
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eval M_$i='skipped' |
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fi |
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done |
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|
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if test $action = 2 ; then |
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count=0 |
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else |
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#date_str=`date +%Y%m%d`"_0" |
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|
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MPACKDIR=`dirname $MPACK` |
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#- build the mpack utility (from build_mpack in testreport): |
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( cd $MPACKDIR && ./configure && make ) > TTT.build_mpack.$$ 2>&1 |
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RETVAL=$? |
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if test "x$RETVAL" != x0 ; then |
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echo |
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echo "Error building the mpack tools at: $MPACK_DIR" |
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if test -x $MPACK ; then |
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HAVE_MPACK=t |
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echo " use (old ?) executable:" ; ls -l $MPACK |
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else |
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HAVE_MPACK=f |
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fi |
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else |
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if test -x $MPACK ; then |
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rm -f TTT.build_mpack.$$ |
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HAVE_MPACK=t |
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echo " building mpack: OK" |
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else |
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echo " $MPACK not executable" |
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HAVE_MPACK=f |
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fi |
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fi |
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echo |
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|
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count=$nbtst |
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fi |
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|
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#- when it's done, retrieve output and send e-mail |
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minutes=0 ; freq=10 |
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fsec=`expr $freq \* 60` |
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echo "Check every $freq mn for $count test(s) to finish" | tee -a $LOG_FIL |
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echo "- start at :" `date` | tee -a $LOG_FIL |
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while test $count != 0 ; do |
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|
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sleep $fsec |
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minutes=$(( $minutes + $freq )) |
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|
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for i in $tst_list ; do |
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|
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eval comm=\$M_$i |
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if test $comm = 'submitted' ; then |
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JOB="tst_"$i |
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ready_to_send=`$QSTAT -a | grep $USER | grep $JOB | wc -l` |
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|
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if test "x_$ready_to_send" = x_0 ; then |
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run_dir=${TST_DIR}"/MITgcm_"$i"/verification" |
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#- results output: |
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tdir=`ls -1 -t $run_dir | grep -v tr_out | grep '^tr_aces' | head -1` |
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if test "x$tdir" != x ; then |
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#- check this is the right output |
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chk=`echo $tdir | grep -c $start` |
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if test $chk = '0' ; then |
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curday=`date +%Y%m%d` |
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chk=`echo $tdir | grep -c $curday` |
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fi |
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if test $chk = '0' ; then |
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echo "tdir='$tdir'" | tee -a $LOG_FIL |
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echo "Output do not match, no email sent for $i" | tee -a $LOG_FIL |
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else |
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rm -f "/tmp/tr_aces-"$i".tar.gz" |
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( cd $run_dir ; tar -czf "/tmp/tr_aces-"$i".tar.gz" ./$tdir ) |
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if test "x$HAVE_MPACK" = xt ; then |
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$MPACK -s MITgcm-test -m 3555000 "/tmp/tr_aces-"$i".tar.gz" jmc@mitgcm.org |
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echo "Email sent for $i at: " `date` | tee -a $LOG_FIL |
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else |
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echo " no email sent for $i (no mpack)" | tee -a $LOG_FIL |
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fi |
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fi |
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else |
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echo " no output found for $i" | tee -a $LOG_FIL |
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fi |
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#- restart output: |
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tdir=`ls -1 -t $run_dir | grep -v tr_out | grep '^rs_aces' | head -1` |
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if test "x$tdir" != x ; then |
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#- check this is the right output |
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chk=`echo $tdir | grep -c $start` |
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if test $chk = '0' ; then |
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curday=`date +%Y%m%d` |
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chk=`echo $tdir | grep -c $curday` |
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fi |
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if test $chk = '0' ; then |
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echo "tdir='$tdir'" | tee -a $LOG_FIL |
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echo "Restart output do not match, no email sent for $i" | tee -a $LOG_FIL |
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else |
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rm -f "/tmp/rs_aces-"$i".tar.gz" |
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( cd $run_dir ; tar -czf "/tmp/rs_aces-"$i".tar.gz" ./$tdir ) |
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if test "x$HAVE_MPACK" = xt ; then |
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$MPACK -s MITgcm-test -m 3555000 "/tmp/rs_aces-"$i".tar.gz" jmc@mitgcm.org |
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echo "Email sent for $i restart:" `date` | tee -a $LOG_FIL |
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else |
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echo " no email sent for $i restart (no mpack)" | tee -a $LOG_FIL |
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fi |
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fi |
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else |
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echo " no restart output for $i" | tee -a $LOG_FIL |
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fi |
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#- record successful sending |
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eval M_$i=done |
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count=`expr $count - 1` |
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chmod 644 output/tst_$i.std* |
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fi |
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fi |
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done |
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|
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# "long" queue is 24hrs = 24*60min = 1440min |
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if test $minutes -gt 2160 ; then |
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hrs=$(( $minutes / 60 )); |
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echo "Time expired after $minutes minutes ($hrs hours)" |
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echo ' ' $count '/' $nbtst 'tests not yet finished' |
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exit 1 |
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fi |
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|
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done |
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|
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echo "Retrieving $nbtst tests finish :" `date` | tee -a $LOG_FIL |
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exit 0 |
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