| 1 |
#!/bin/bash |
| 2 |
# |
| 3 |
#PBS -q four-twelve |
| 4 |
#PBS -N tst_adm |
| 5 |
#PBS -l nodes=2:ppn=2 |
| 6 |
#PBS -e /home/jmc/test_ACES/output/tst_adm.stderr |
| 7 |
#PBS -o /home/jmc/test_ACES/output/tst_adm.stdout |
| 8 |
|
| 9 |
# $Header: /u/gcmpack/MITgcm/tools/example_scripts/ACESgrid/aces_test_adm_mpi,v 1.4 2009/06/16 21:32:22 jmc Exp $ |
| 10 |
# $Name: $ |
| 11 |
|
| 12 |
# ACES-grid PBS-batch script for Adjoint MPI test using ifort (default=v8) & mpich |
| 13 |
|
| 14 |
if test -f /etc/profile.d/modules.sh ; then |
| 15 |
. /etc/profile.d/modules.sh |
| 16 |
fi |
| 17 |
# Note: added "ulimit -s unlimited" in file "~/.bashrc" |
| 18 |
# to pass big test (the 2 fizhi-cs-* test & adjoint tests) with MPI |
| 19 |
|
| 20 |
umask 0022 |
| 21 |
#- to get case insensitive "ls" (and order of tested experiments) |
| 22 |
export LC_ALL="en_US.UTF-8" |
| 23 |
|
| 24 |
TST_DIR="/home/jmc/test_ACES/gcm_tests" |
| 25 |
HERE='/home/jmc/test_ACES/output' |
| 26 |
#cd $HERE |
| 27 |
|
| 28 |
sfx='adm' |
| 29 |
module add mpich/intel |
| 30 |
module add netcdf/3.6.1/icc |
| 31 |
export MPI_INC_DIR='/usr/local/pkg/mpich/mpich-intel/include/' |
| 32 |
OPTFILE="../tools/build_options/linux_ia32_ifort+mpi_aces" |
| 33 |
#OPTFILE="$HERE/linux_ia32_ifort+mpi_aces" |
| 34 |
options='-adm -mpi -match 10' |
| 35 |
#- need this to get "staf": |
| 36 |
export PATH="$PATH:$HOME/bin" |
| 37 |
|
| 38 |
checkOut=1 |
| 39 |
#options="$options -nc" ; checkOut=0 |
| 40 |
#options="$options -q" ; checkOut=0 |
| 41 |
|
| 42 |
MF=$HERE"/mf_"$sfx |
| 43 |
cat $PBS_NODEFILE | sort | uniq > $MF |
| 44 |
NCPU=`wc -l $MF | awk '{print $1}'` |
| 45 |
EXE="mpirun -machinefile $MF -v -np $NCPU ./mitgcmuv_ad" |
| 46 |
|
| 47 |
gcmDIR="MITgcm_$sfx" |
| 48 |
cd $TST_DIR |
| 49 |
#- check for disk space: |
| 50 |
dsp=`df . | tail -1 | awk '{print $5}' | sed 's/%$//'` |
| 51 |
if [ $dsp -gt 99 ] ; then |
| 52 |
echo 'Not enough space on this disk => do not run testreport.' |
| 53 |
df . |
| 54 |
exit |
| 55 |
fi |
| 56 |
if [ $checkOut -eq 1 ] ; then |
| 57 |
if test -d $gcmDIR/CVS ; then |
| 58 |
echo "cvs update of dir $gcmDIR :" |
| 59 |
( cd $gcmDIR ; cvs -q -d :pserver:cvsanon@mitgcm.org:/u/gcmpack update -P -d ) |
| 60 |
/bin/rm -rf $gcmDIR/verification/tr_aces-${sfx}_????????_? |
| 61 |
else |
| 62 |
echo "no dir: $gcmDIR/CVS => try a fresh check-out" |
| 63 |
checkOut=2 |
| 64 |
fi |
| 65 |
fi |
| 66 |
if [ $checkOut -eq 2 ] ; then |
| 67 |
if test -e $gcmDIR ; then |
| 68 |
rm -rf $gcmDIR |
| 69 |
fi |
| 70 |
cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co -P -d $gcmDIR MITgcm > /dev/null 2>&1 |
| 71 |
# cvs co MITgcm |
| 72 |
/usr/bin/find $gcmDIR -type d | xargs chmod g+rxs |
| 73 |
/usr/bin/find $gcmDIR -type f | xargs chmod g+r |
| 74 |
else |
| 75 |
if test -e $gcmDIR/verification ; then |
| 76 |
echo "dir $gcmDIR/verification exist" |
| 77 |
else |
| 78 |
echo "no dir $gcmDIR/verification => exit" |
| 79 |
exit |
| 80 |
fi |
| 81 |
fi |
| 82 |
|
| 83 |
cd $gcmDIR/verification |
| 84 |
echo ./testreport $options -of $OPTFILE -command \"$EXE\" -odir aces-$sfx |
| 85 |
./testreport $options -of $OPTFILE -command "$EXE" -odir aces-$sfx |
Parent Directory
| 
Revision Log
| 
Revision Graph