#!/bin/bash

# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/example_scripts/ACESgrid/Attic/aces_check_mp2,v 1.1 2011/11/07 15:36:21 jmc Exp $
# $Name:  $

sfx='mp2'
#EXE="mpiexec -pernode -comm pmi -np $NCPU ./mitgcmuv"
longChk=300
shortChk=60
pNam='mpiexec'
uNam=$USER
HERE=`pwd`
pLog="kill_$sfx.log"

echo "start $0 from $HERE at:" `date` "by user: $uNam"
#uNam='jmc' ; HERE='/home/jmc/test_ACES/output' ; cd $HERE

while test ! -f stop_check_$sfx
do
  # check for defunct proc
  nZ=`ps -f -u $uNam | grep $pNam | grep '<defunct>' | wc -l`
  if [ $nZ -ge 1 ] ; then
    echo "found $nZ $pNam zombie processes at:" `date`
    listZ=`ps -f -u $uNam | grep $pNam | grep '<defunct>' | awk '{print $2}'`
    sleep $shortChk
    for p1Z in $listZ ; do
      p2Z=`ps -f -p $p1Z | grep '<defunct>' | awk '{print $2}'`
      if test "x$p2Z" = "x$p1Z" ; then
        #-- report to permanent log file
        date >> $pLog ; uname -a >> $pLog
        ps -f -p $p1Z | tee -a $pLog
        ppZ=`ps -f -p $p1Z | grep $pNam | awk '{print $3}'`
#--- version-1 : try to kill parent of Zombie proc
        echo " try to kill parent proc: $ppZ at:" `date` | tee -a $pLog
        kill -9 $ppZ
        out=$?
        echo " return code: $out" | tee -a $pLog
#--- version-2 : try to kill other pNam child proc from same parent
#       echo " list of $pNam proc at:" `date`
#       ps -f -u $uNam | grep $pNam
#       listP=`ps -f -u $uNam | grep $pNam | awk '{print $2 "p" $3}'`
#       echo " try to kill proc from same parent=$ppZ" | tee -a $pLog
#       ps -f -p $ppZ
#      #echo " listP='$listP'"
#       for xx in $listP
#       do
#         pc=`echo $xx | sed 's/p/ /' | awk '{print $1}'`
#         pp=`echo $xx | sed 's/p/ /' | awk '{print $2}'`
#        #echo " xx='$xx' ; child=$pc ; parent=$pp"
#         if test "x$pp" = "x$ppZ" -a "x$pc" != "x$p1Z" ; then
#           ps -f -p $pc | tee -a $pLog
#           echo " killing proc: $pc" | tee -a $pLog
#           kill -9 $ppZ
#           out=$?
#           echo " return code: $out" | tee -a $pLog
#         fi
#       done
#---
        echo " list of remaining $pNam proc:" | tee -a $pLog
        ps -f -u $uNam | grep $pNam | tee -a $pLog
        echo '--------------------' >> $pLog
      else
        echo " proc: $p1Z no more Zombie at:" `date`
      fi
    done
    nZ=`ps -f -u $uNam | grep $pNam | grep '<defunct>' | wc -l`
    echo " $nZ $pNam zombie process remain at:" `date`
    echo '--------------------'
  fi
  sleep $longChk
done
ls -l stop_check_$sfx
exit