| 1 |
jmc |
1.2 |
#! /usr/bin/env bash |
| 2 |
jmc |
1.1 |
|
| 3 |
jmc |
1.14 |
# $Header: /u/gcmpack/MITgcm/tools/do_tst_2+2,v 1.13 2011/05/19 13:18:43 jmc Exp $ |
| 4 |
jmc |
1.1 |
# $Name: $ |
| 5 |
|
|
|
| 6 |
|
|
usage() |
| 7 |
|
|
{ |
| 8 |
|
|
echo "Usage: `basename $0` [OPTIONS]" |
| 9 |
|
|
echo " -> perform test 2+2=4 for several experiments" |
| 10 |
|
|
echo "" |
| 11 |
|
|
echo "where possible OPTIONS are:" |
| 12 |
|
|
echo " -help : print usage" |
| 13 |
|
|
echo " -t LIST_EXP : only check experiments in LIST_EXP" |
| 14 |
|
|
echo " -skd LIST_EXP : skip experiments in LIST_EXP" |
| 15 |
jmc |
1.3 |
echo " -exe COMMAND : use COMMAND to run the tests" |
| 16 |
|
|
echo " -mpi : run the tests using MPI" |
| 17 |
jmc |
1.10 |
echo " -mf STRING :(MPI) file with list of possible machines to run on" |
| 18 |
jmc |
1.2 |
echo " -o STRING : used to build output directory name" |
| 19 |
jmc |
1.1 |
echo " (DEF=\"hostname\")" |
| 20 |
jmc |
1.2 |
echo " -a,-A STRING : email address to send output to" |
| 21 |
jmc |
1.1 |
echo " (DEF=\"\" no email is sent)" |
| 22 |
jmc |
1.2 |
echo " (-A: + save each log file)" |
| 23 |
jmc |
1.1 |
echo " -clean : clean output & reset" |
| 24 |
|
|
exit |
| 25 |
|
|
} |
| 26 |
|
|
|
| 27 |
|
|
CLEAN=0 |
| 28 |
|
|
TESTDIRS= |
| 29 |
|
|
SKIPDIRS= |
| 30 |
jmc |
1.3 |
SCRIPT='../tools/tst_2+2' |
| 31 |
jmc |
1.13 |
LOGFILE='tst_2+2_out.log' |
| 32 |
jmc |
1.5 |
scrArg='All' |
| 33 |
jmc |
1.3 |
COMMAND= |
| 34 |
|
|
mpi=0 |
| 35 |
jmc |
1.10 |
MPI_MFILE= |
| 36 |
jmc |
1.4 |
OUTDIR=`hostname | sed 's/\..*$//'` |
| 37 |
jmc |
1.2 |
SAVELOG=0 |
| 38 |
jmc |
1.1 |
ADDRESS= |
| 39 |
|
|
MPACK="../tools/mpack-1.6/mpack" |
| 40 |
|
|
here=`pwd` |
| 41 |
|
|
yy= |
| 42 |
|
|
for xx |
| 43 |
|
|
do |
| 44 |
|
|
if test -n "$yy"; then |
| 45 |
|
|
eval "$yy=\$xx" |
| 46 |
|
|
yy= |
| 47 |
|
|
else |
| 48 |
|
|
case $xx in |
| 49 |
|
|
-help ) usage ;; |
| 50 |
|
|
-clean) CLEAN=1 ;; |
| 51 |
|
|
-t ) yy=TESTDIRS ;; |
| 52 |
|
|
-skd ) yy=SKIPDIRS ;; |
| 53 |
jmc |
1.3 |
-exe ) yy=COMMAND ;; |
| 54 |
|
|
-mpi ) mpi=1 ;; |
| 55 |
jmc |
1.10 |
-mf ) yy=MPI_MFILE ;; |
| 56 |
jmc |
1.1 |
-a ) yy=ADDRESS ;; |
| 57 |
jmc |
1.2 |
-A ) yy=ADDRESS ; SAVELOG=1 ;; |
| 58 |
jmc |
1.1 |
-o ) yy=OUTDIR ;; |
| 59 |
|
|
*) echo "Error: unrecognized option: "$xx ; usage ; exit ;; |
| 60 |
|
|
esac |
| 61 |
|
|
fi |
| 62 |
|
|
done |
| 63 |
|
|
#------------------------ |
| 64 |
|
|
|
| 65 |
jmc |
1.2 |
if test "x$TESTDIRS" = x ; then TESTDIRS=`ls ` ; fi |
| 66 |
jmc |
1.1 |
LIST="" |
| 67 |
|
|
for xx in $TESTDIRS |
| 68 |
|
|
do |
| 69 |
|
|
yy=`echo $SKIPDIRS | grep -c $xx` |
| 70 |
|
|
if test $yy = 0 ; then |
| 71 |
jmc |
1.2 |
if test -f $xx/results/output.txt ; then |
| 72 |
jmc |
1.1 |
LIST=${LIST}" "$xx |
| 73 |
|
|
# else |
| 74 |
|
|
# echo ""; echo -n " -- skip \"$xx\" (not a directory !)" |
| 75 |
|
|
fi |
| 76 |
|
|
# else |
| 77 |
|
|
# echo ""; echo -n " -- skip \"$xx\" (excluded)" |
| 78 |
|
|
fi |
| 79 |
|
|
done |
| 80 |
|
|
|
| 81 |
|
|
if test -x $SCRIPT ; then |
| 82 |
|
|
echo "run script '$SCRIPT' for experiment in:" |
| 83 |
|
|
echo " $LIST" |
| 84 |
jmc |
1.2 |
yy=`echo $SCRIPT | grep -c '^\/'` |
| 85 |
jmc |
1.1 |
if test $yy = 0 ; then SCRIPT="../../$SCRIPT" ; fi |
| 86 |
|
|
else |
| 87 |
|
|
echo "ERROR: script '$SCRIPT' not found or not executable" |
| 88 |
|
|
exit |
| 89 |
|
|
fi |
| 90 |
|
|
echo "" |
| 91 |
|
|
#------------------------ |
| 92 |
|
|
|
| 93 |
|
|
if test $CLEAN = 1 ; then |
| 94 |
|
|
for xx in $LIST |
| 95 |
|
|
do |
| 96 |
|
|
listD='run '`(cd $xx/results ; ls output.*.txt 2> /dev/null | sed 's/^output\./tr_run./g' | sed 's/\.txt$//g' )` |
| 97 |
|
|
for yy in $listD |
| 98 |
|
|
do |
| 99 |
jmc |
1.2 |
if test -r $xx/$yy/data.tst ; then |
| 100 |
jmc |
1.1 |
echo "clean dir:" $xx/$yy |
| 101 |
jmc |
1.2 |
cd $xx/$yy |
| 102 |
jmc |
1.12 |
echo ' ' >> $LOGFILE |
| 103 |
|
|
echo $SCRIPT 4 >> $LOGFILE |
| 104 |
|
|
$SCRIPT 4 >> $LOGFILE 2>&1 |
| 105 |
jmc |
1.1 |
cd $here |
| 106 |
|
|
fi |
| 107 |
|
|
done |
| 108 |
|
|
done |
| 109 |
|
|
exit |
| 110 |
|
|
fi |
| 111 |
|
|
#------------------------ |
| 112 |
|
|
# Create a uniquely named directory to store results |
| 113 |
jmc |
1.10 |
CMDLINE=$0 |
| 114 |
|
|
for xx in "$@" ; do nw=`echo $xx | wc -w` |
| 115 |
|
|
if test $nw = '1' ; then CMDLINE="$CMDLINE $xx" |
| 116 |
|
|
else CMDLINE="$CMDLINE '$xx'" ; fi |
| 117 |
|
|
done |
| 118 |
|
|
#for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done |
| 119 |
jmc |
1.14 |
DATE='' |
| 120 |
|
|
if test -f tr_out.txt ; then |
| 121 |
|
|
# try to use the date corresponding to 'Start time:' in file "tr_out.txt" : |
| 122 |
|
|
sTime=`grep '^Start time: ' tr_out.txt 2>/dev/null | sed 's/Start time: //'` |
| 123 |
|
|
if test "x$sTime" != x ; then DATE=`date -d "$sTime" "+%Y%m%d" 2>/dev/null` ; fi |
| 124 |
|
|
fi |
| 125 |
|
|
# otherwise, use current date: |
| 126 |
|
|
if test "x$DATE" = x ; then DATE=`date +%Y%m%d`; fi |
| 127 |
jmc |
1.1 |
BASE="rs_"$OUTDIR"_"$DATE"_" |
| 128 |
|
|
xx=0 |
| 129 |
|
|
DRESULTS="$BASE$xx" |
| 130 |
|
|
while test -e $DRESULTS ; do |
| 131 |
|
|
xx=$(( $xx + 1 )) |
| 132 |
|
|
DRESULTS="$BASE$xx" |
| 133 |
|
|
done |
| 134 |
|
|
mkdir $DRESULTS |
| 135 |
|
|
out=$? |
| 136 |
|
|
if test "x$out" != x0 ; then |
| 137 |
|
|
echo "ERROR: Can't create results directory \"./$DRESULTS\"" |
| 138 |
|
|
exit 1 |
| 139 |
|
|
fi |
| 140 |
|
|
SUMMARY="$DRESULTS/summary.txt" |
| 141 |
|
|
OPTFILE= |
| 142 |
|
|
|
| 143 |
|
|
printf "Start time: " > $SUMMARY |
| 144 |
|
|
date >> $SUMMARY |
| 145 |
jmc |
1.10 |
echo 'run:' $CMDLINE >> $SUMMARY |
| 146 |
jmc |
1.1 |
if test -f tr_out.txt ; then |
| 147 |
|
|
echo ' using output from:' >> $SUMMARY |
| 148 |
jmc |
1.11 |
sed -n '2,/^ OPTFILE=/ p' tr_out.txt >> $SUMMARY |
| 149 |
jmc |
1.1 |
echo >> $SUMMARY |
| 150 |
|
|
fi |
| 151 |
|
|
echo 'test 2+2=4 summary :' >> $SUMMARY |
| 152 |
|
|
echo >> $SUMMARY |
| 153 |
|
|
echo 'P. Run Result experiment' >> $SUMMARY |
| 154 |
|
|
echo ' 1 2 3' >> $SUMMARY |
| 155 |
|
|
|
| 156 |
jmc |
1.3 |
#-- For MPI test: |
| 157 |
jmc |
1.10 |
LOC_MFILE='tr_mpi_mfile' |
| 158 |
jmc |
1.3 |
RUNOUTP="output.txt" |
| 159 |
|
|
if [ $mpi -ge 1 ] ; then |
| 160 |
|
|
SCRIPT="$SCRIPT -mpi" |
| 161 |
|
|
RUNOUTP="STDOUT.0000" |
| 162 |
|
|
fi |
| 163 |
|
|
|
| 164 |
jmc |
1.1 |
for xx in $LIST |
| 165 |
|
|
do |
| 166 |
|
|
echo ============================================================================== |
| 167 |
jmc |
1.10 |
if [ $mpi -le 0 ] ; then |
| 168 |
|
|
rCommand=$COMMAND |
| 169 |
|
|
else |
| 170 |
|
|
LOC_NPROC=2 |
| 171 |
jmc |
1.8 |
mpi_size=$xx/build/SIZE.h.mpi |
| 172 |
|
|
if test -f $mpi_size ; then |
| 173 |
|
|
px=`grep '^ & *nPx *=' $mpi_size | sed 's/^ & *nPx *= *//' | sed 's/, *$//'` |
| 174 |
|
|
py=`grep '^ & *nPy *=' $mpi_size | sed 's/^ & *nPy *= *//' | sed 's/, *$//'` |
| 175 |
|
|
pp=`expr $px \* $py` > /dev/null 2>&1 ; out=$? |
| 176 |
jmc |
1.10 |
if test "x$out" = x0 ; then LOC_NPROC=$pp ; fi |
| 177 |
|
|
fi |
| 178 |
|
|
rCommand=`echo $COMMAND | sed "s/ TR_NPROC / $LOC_NPROC /"` |
| 179 |
|
|
if test "x$MPI_MFILE" != x ; then |
| 180 |
|
|
#- create new MPI machine-file with the right number of Procs |
| 181 |
|
|
rm -f $LOC_MFILE |
| 182 |
|
|
cat $MPI_MFILE | sort | uniq | head -$LOC_NPROC > $LOC_MFILE |
| 183 |
|
|
nl=`wc -l $LOC_MFILE | awk '{print $1}'` |
| 184 |
|
|
if [ $nl -lt $LOC_NPROC ] ; then |
| 185 |
|
|
rm -f $LOC_MFILE |
| 186 |
|
|
cat $MPI_MFILE | head -$LOC_NPROC > $LOC_MFILE |
| 187 |
|
|
fi |
| 188 |
|
|
rCommand=`echo $rCommand | sed "s/ TR_MFILE / ..\/..\/$LOC_MFILE /"` |
| 189 |
jmc |
1.8 |
fi |
| 190 |
|
|
fi |
| 191 |
jmc |
1.10 |
|
| 192 |
jmc |
1.1 |
listD='run '`(cd $xx/results ; ls output.*.txt 2> /dev/null | sed 's/^output\./tr_run./g' | sed 's/\.txt$//g' )` |
| 193 |
|
|
for yy in $listD |
| 194 |
|
|
do |
| 195 |
jmc |
1.3 |
if test -f $xx/$yy/$RUNOUTP ; then |
| 196 |
jmc |
1.1 |
if test "x$OPTFILE" = x -a -f $xx/build/Makefile ; then |
| 197 |
|
|
comm=`grep '^# OPTFILE=' $xx/build/Makefile 2>/dev/null | head -1 | sed 's/^# //'` |
| 198 |
|
|
echo "from '$xx/build/Makefile', extract:" > $DRESULTS/genmake_state |
| 199 |
jmc |
1.6 |
sed -n '/^# executed by:/,+1 p' $xx/build/Makefile >> $DRESULTS/genmake_state |
| 200 |
jmc |
1.7 |
echo " $comm" >> $DRESULTS/genmake_state |
| 201 |
jmc |
1.1 |
eval $comm |
| 202 |
jmc |
1.7 |
gmkLog=$xx/build/genmake.log |
| 203 |
|
|
grep '^Get compiler version using:' $gmkLog > /dev/null 2>&1 |
| 204 |
|
|
out=$? |
| 205 |
|
|
if test "x$out" = x0 ; then |
| 206 |
|
|
echo "from '$gmkLog', extract compiler version:" >> $DRESULTS/genmake_state |
| 207 |
|
|
sed -n '/Get compiler version/,/<-- compiler version/p' $gmkLog \ |
| 208 |
|
|
| grep -v '^... compiler version ' > tr_vers.tmp_log |
| 209 |
|
|
sed -n '1,/^$/p' tr_vers.tmp_log | sed '/^$/d' | sed 's/^./ &/' \ |
| 210 |
|
|
>> $DRESULTS/genmake_state |
| 211 |
|
|
rm -f tr_vers.tmp_log |
| 212 |
|
|
fi |
| 213 |
jmc |
1.1 |
fi |
| 214 |
jmc |
1.2 |
if test $yy = 'run' ; then nam=$xx |
| 215 |
jmc |
1.1 |
else nam=$xx`echo $yy | sed 's/tr_run//'` ; fi |
| 216 |
|
|
echo -n "Entering $xx/$yy :" |
| 217 |
|
|
cd $xx/$yy |
| 218 |
jmc |
1.12 |
pwd > $LOGFILE |
| 219 |
jmc |
1.3 |
if test "x$COMMAND" = x ; then |
| 220 |
jmc |
1.12 |
echo $SCRIPT $scrArg >> $LOGFILE ; echo ' ' >> $LOGFILE |
| 221 |
|
|
$SCRIPT $scrArg >> $LOGFILE 2>&1 |
| 222 |
jmc |
1.3 |
out=$? |
| 223 |
|
|
else |
| 224 |
jmc |
1.12 |
echo "$SCRIPT $scrArg -command \"$rCommand\"" >> $LOGFILE |
| 225 |
|
|
echo ' ' >> $LOGFILE |
| 226 |
|
|
$SCRIPT $scrArg -command "$rCommand" >> $LOGFILE 2>&1 |
| 227 |
jmc |
1.3 |
out=$? |
| 228 |
|
|
fi |
| 229 |
jmc |
1.1 |
case $out in |
| 230 |
|
|
0 ) echo ' pass test 2+2=4' |
| 231 |
|
|
echo "Y Y Y Y pass <- $nam" >> ../../$SUMMARY ;; |
| 232 |
|
|
4|5) echo "Y Y Y Y FAIL ($out) - $nam" >> ../../$SUMMARY ;; |
| 233 |
|
|
3 ) echo "Y Y Y N FAIL ($out) - $nam" >> ../../$SUMMARY ;; |
| 234 |
|
|
2 ) echo "Y Y N N FAIL ($out) - $nam" >> ../../$SUMMARY ;; |
| 235 |
|
|
1 ) echo "Y N N N FAIL ($out) - $nam" >> ../../$SUMMARY ;; |
| 236 |
|
|
* ) echo "N N N N FAIL ($out) - $nam" >> ../../$SUMMARY ;; |
| 237 |
|
|
esac |
| 238 |
jmc |
1.2 |
if test $out != '0' ; then |
| 239 |
jmc |
1.1 |
echo " test 2+2=4 FAIL (exit $out)" |
| 240 |
|
|
echo " " |
| 241 |
jmc |
1.12 |
tail -5 $LOGFILE |
| 242 |
jmc |
1.1 |
echo " " |
| 243 |
jmc |
1.12 |
cp -p $LOGFILE ../../$DRESULTS/$nam.log |
| 244 |
jmc |
1.2 |
elif test $SAVELOG = 1 ; then |
| 245 |
jmc |
1.12 |
cp -p $LOGFILE ../../$DRESULTS/$nam.log |
| 246 |
jmc |
1.1 |
fi |
| 247 |
|
|
cd $here |
| 248 |
|
|
fi |
| 249 |
|
|
done |
| 250 |
jmc |
1.10 |
if test "x$mpi" != x0 -a "x$MPI_MFILE" != x ; then rm -f $LOC_MFILE ; fi |
| 251 |
jmc |
1.1 |
done |
| 252 |
|
|
printf "End time: " >> $SUMMARY |
| 253 |
|
|
date >> $SUMMARY |
| 254 |
|
|
|
| 255 |
|
|
# If address was supplied and mpack exist, then send email using mpack. |
| 256 |
|
|
if test "x$ADDRESS" != xNONE -a "x$ADDRESS" != x ; then |
| 257 |
|
|
if test -x $MPACK ; then |
| 258 |
|
|
tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \ |
| 259 |
|
|
&& gzip $DRESULTS".tar" \ |
| 260 |
|
|
&& $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESS |
| 261 |
|
|
out=$? |
| 262 |
|
|
if test "x$out" != x0 ; then |
| 263 |
|
|
echo |
| 264 |
|
|
echo "Warning: The tar, gzip, & mpack step failed. Please send email" |
| 265 |
|
|
echo " to <MITgcm-support@mitgcm.org> for help. You may copy the " |
| 266 |
|
|
echo " summary of results from the directory \"$DRESULTS\"." |
| 267 |
|
|
echo |
| 268 |
|
|
else |
| 269 |
|
|
echo |
| 270 |
|
|
echo "An email containing results was sent to the following address:" |
| 271 |
|
|
echo " \"$ADDRESS\"" |
| 272 |
|
|
echo |
| 273 |
|
|
fi |
| 274 |
|
|
test -f $DRESULTS".tar" && rm -f $DRESULTS".tar" |
| 275 |
|
|
test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz" |
| 276 |
|
|
else |
| 277 |
|
|
echo "Warning: $MPACK is not executable => no email was sent" |
| 278 |
|
|
echo |
| 279 |
|
|
fi |
| 280 |
|
|
fi |
| 281 |
|
|
|
| 282 |
|
|
# save output and remove output Dir (if no address was provided) |
| 283 |
|
|
# note: to keep the output Dir without sending email, use option "-a NONE" |
| 284 |
|
|
if test -f tst_2+2_out.txt ; then mv -f tst_2+2_out.txt tst_2+2_out.old ; fi |
| 285 |
|
|
cp -p $SUMMARY tst_2+2_out.txt |
| 286 |
|
|
if test "x$ADDRESS" = x ; then |
| 287 |
|
|
rm -rf $DRESULTS |
| 288 |
|
|
fi |
| 289 |
|
|
|
Parent Directory
| 
Revision Log
| 
Revision Graph