Annotation of /MITgcm/tools/build_options/linux_amd64_gfortran

#!/bin/bash

#  $Header: /u/gcmpack/MITgcm/tools/build_options/linux_amd64_gfortran,v 1.16 2011/12/02 15:19:38 mlosch Exp $
#  $Name:  $

# Build options for gfortran compiler (GNU) on Linux AMD64 platform
#
#  Tested with gcc-gfortran v4.1.x as shipped with Fedora Core 6,7,8
#         with gcc-gfortran v4.3.x as shipped with Fedora Core 9,10
#
# OpenMP : Tested on dickens with gcc-gfortran v4.3.2 as shipped with FC 10
#              on baudelaire with gcc-gfortran v4.4.5 as shipped with FC 13
#              on danton     with gcc-gfortran v4.5.1 as shipped with FC 14
#              on acesgrid   with gcc-gfortran v4.6.0 as shipped with FC 15
#
# MPI : Tested on acesgrid (Fedora Core 15), using:
#       module load gcc     (Version 4.6.0)
#   and with mpich1:
#       module load mvapich
#   or  with mpich2:
#       module load mvapich2
#   or  with openmpi:
#       module load openmpi
# and on baudelaire.csail.mit.edu (FC13), using:
#       export MPI_GCC_DIR=/srv/software/gcc/gcc-packages/gcc-4.4.5/mpich2/mpich2-1.3
#       export MPI_INC_DIR=$MPI_GCC_DIR/include
#       export PATH=$MPI_GCC_DIR/bin:$PATH

#-------
# run with OpenMP: needs to set environment var. OMP_NUM_THREADS
#    and generally, needs to increase the thread stack-size:
#   -  sh,bash:
#     > export OMP_NUM_THREADS=2
#     > export GOMP_STACKSIZE=400m
#   - csh,tcsh:
#     > setenv OMP_NUM_THREADS 2
#     > setenv GOMP_STACKSIZE 400m
#-------

if test "x$MPI" = xtrue ; then
  CC=${CC:=mpicc}
  FC=${FC:=mpif77}
  F90C=${F90C:=mpif90}
else
  CC=gcc
  FC=gfortran
  F90C=gfortran
fi

DEFINES='-DWORDLENGTH=4 -DNML_TERMINATOR'
CPP='cpp -traditional -P'
EXTENDED_SRC_FLAG='-ffixed-line-length-132'
F90FIXEDFORMAT='-ffixed-form'
GET_FC_VERSION="--version"
OMPFLAG='-fopenmp'

NOOPTFLAGS='-O0'
NOOPTFILES=''

# Requires gfortran from 2006 onwards for -fconvert=big-endian
FFLAGS="$FFLAGS -fconvert=big-endian -fimplicit-none"
# for big objects:
FFLAGS="$FFLAGS -fPIC"
#- might want to use '-fdefault-real-8' for fizhi pkg:
#FFLAGS="$FFLAGS -fdefault-real-8"

if test "x$IEEE" = x ; then     #- with optimisation:
   #- full optimisation
    FOPTIM='-O3 -funroll-loops'
    NOOPTFILES="$NOOPTFILES ini_masks_etc.F"
   #- can use -O2 (safe optimisation) to avoid Pb with some gcc version of -O3:
   #FOPTIM='-O2 -funroll-loops'
else
   # these may also be useful, but require specific gfortran versions:
   # -Wnonstd-intrinsics  for gfortran <= 4.3
   # -Wintrinsics-std     for gfortran >= 4.4
   # -Wno-tabs            for gfortran >= 4.3
    FFLAGS="$FFLAGS -Waliasing -Wampersand -Wsurprising -Wline-truncation"
   #- to get plenty of warnings: -Wall -Wextra (older form: -Wall -W) or:
   #FFLAGS="$FFLAGS -Wconversion -Wimplicit-interface -Wunused-labels"
  if test "x$DEVEL" = x ; then  #- no optimisation + IEEE :
    FOPTIM='-O0'
  else                          #- development/check options:
    FOPTIM='-O0 -g -fbounds-check'
    FOPTIM="$FOPTIM -ffpe-trap=invalid,zero,overflow -finit-real=inf"
  fi
fi

F90FLAGS=$FFLAGS
F90OPTIM=$FOPTIM
CFLAGS='-O0 -fPIC'

INCLUDEDIRS=''
INCLUDES=''
LIBS=''

if [ "x$NETCDF_ROOT" != x ] ; then
    INCLUDEDIR="${NETCDF_ROOT}/include"
    INCLUDES="-I${NETCDF_ROOT}/include"
    LIBDIR="${NETCDF_ROOT}/lib"
    LIBS="-L${NETCDF_ROOT}/lib"
elif [ "x$NETCDF_HOME" != x ]; then
    INCLUDEDIR="${NETCDF_HOME}/include"
    INCLUDES="-I${NETCDF_HOME}/include"
    LIBDIR="${NETCDF_HOME}/lib"
    LIBS="-L${NETCDF_HOME}/lib"
elif [ "x$NETCDF_INC" != x -a "x$NETCDF_LIB" != x ]; then
    NETCDF_INC=`echo $NETCDF_INC | sed 's/-I//g'`
    NETCDF_LIB=`echo $NETCDF_LIB | sed 's/-L//g'`
    INCLUDEDIR="${NETCDF_INC}"
    INCLUDES="-I${NETCDF_INC}"
    LIBDIR="${NETCDF_LIB}"
    LIBS="-L${NETCDF_LIB}"
elif [ "x$NETCDF_INCDIR" != x -a "x$NETCDF_LIBDIR" != x ]; then
    INCLUDEDIR="${NETCDF_INCDIR}"
    INCLUDES="-I${NETCDF_INCDIR}"
    LIBDIR="${NETCDF_LIBDIR}"
    LIBS="-L${NETCDF_LIBDIR}"
elif test -d /usr/include/netcdf-3 ; then
    INCLUDES='-I/usr/include/netcdf-3'
    LIBS='-L/usr/lib/netcdf-3 -L/usr/lib64/netcdf-3'
elif test -d /usr/include/netcdf ; then
    INCLUDES='-I/usr/include/netcdf'
elif test -d /usr/local/netcdf ; then
    INCLUDES='-I/usr/local/netcdf/include'
    LIBS='-L/usr/local/netcdf/lib'
elif test -d /usr/local/include/netcdf.inc ; then
    INCLUDES='-I/usr/local/include'
    LIBS='-L/usr/local/lib64'
elif test -d /usr/include/netcdf.inc ; then
    INCLUDES='-I/usr/include'
    LIBS='-L/usr/lib64'
fi

if [ -n "$MPI_INC_DIR" -a "x$MPI" = xtrue ] ; then
    INCLUDES="$INCLUDES -I$MPI_INC_DIR"
    INCLUDEDIRS="$INCLUDEDIRS $MPI_INC_DIR"
    MPIINCLUDEDIR="$MPI_INC_DIR"
    MPI_HEADER_FILES='mpif.h mpiof.h'
    MPI_HEADER_FILES_INC='./mpi_headers/mpif.h ./mpi_headers/mpiof.h'
fi
1	edhill	1.1	#!/bin/bash
2	jmc	1.7
3	jmc	1.17	# $Header: /u/gcmpack/MITgcm/tools/build_options/linux_amd64_gfortran,v 1.16 2011/12/02 15:19:38 mlosch Exp $
4	edhill	1.1	# $Name: $
5	jmc	1.7
6	jmc	1.14	# Build options for gfortran compiler (GNU) on Linux AMD64 platform
7			#
8	jmc	1.5	# Tested with gcc-gfortran v4.1.x as shipped with Fedora Core 6,7,8
9			# with gcc-gfortran v4.3.x as shipped with Fedora Core 9,10
10	jmc	1.14	#
11			# OpenMP : Tested on dickens with gcc-gfortran v4.3.2 as shipped with FC 10
12			# on baudelaire with gcc-gfortran v4.4.5 as shipped with FC 13
13			# on danton with gcc-gfortran v4.5.1 as shipped with FC 14
14			# on acesgrid with gcc-gfortran v4.6.0 as shipped with FC 15
15			#
16			# MPI : Tested on acesgrid (Fedora Core 15), using:
17			# module load gcc (Version 4.6.0)
18			# and with mpich1:
19			# module load mvapich
20			# or with mpich2:
21			# module load mvapich2
22			# or with openmpi:
23			# module load openmpi
24			# and on baudelaire.csail.mit.edu (FC13), using:
25			# export MPI_GCC_DIR=/srv/software/gcc/gcc-packages/gcc-4.4.5/mpich2/mpich2-1.3
26			# export MPI_INC_DIR=$MPI_GCC_DIR/include
27			# export PATH=$MPI_GCC_DIR/bin:$PATH
28	edhill	1.1
29	jmc	1.7	#-------
30	jmc	1.10	# run with OpenMP: needs to set environment var. OMP_NUM_THREADS
31	jmc	1.7	# and generally, needs to increase the thread stack-size:
32			# - sh,bash:
33			# > export OMP_NUM_THREADS=2
34			# > export GOMP_STACKSIZE=400m
35			# - csh,tcsh:
36			# > setenv OMP_NUM_THREADS 2
37			# > setenv GOMP_STACKSIZE 400m
38			#-------
39	edhill	1.1
40	jmc	1.14	if test "x$MPI" = xtrue ; then
41			CC=${CC:=mpicc}
42			FC=${FC:=mpif77}
43			F90C=${F90C:=mpif90}
44			else
45			CC=gcc
46			FC=gfortran
47			F90C=gfortran
48			fi
49
50	ce107	1.2	DEFINES='-DWORDLENGTH=4 -DNML_TERMINATOR'
51	jmc	1.14	CPP='cpp -traditional -P'
52	jmc	1.4	EXTENDED_SRC_FLAG='-ffixed-line-length-132'
53	utke	1.15	F90FIXEDFORMAT='-ffixed-form'
54	jmc	1.12	GET_FC_VERSION="--version"
55	jmc	1.7	OMPFLAG='-fopenmp'
56	edhill	1.1
57	jmc	1.14	NOOPTFLAGS='-O0'
58			NOOPTFILES=''
59	ce107	1.2
60			# Requires gfortran from 2006 onwards for -fconvert=big-endian
61			FFLAGS="$FFLAGS -fconvert=big-endian -fimplicit-none"
62	jmc	1.10	# for big objects:
63			FFLAGS="$FFLAGS -fPIC"
64	jmc	1.14	#- might want to use '-fdefault-real-8' for fizhi pkg:
65			#FFLAGS="$FFLAGS -fdefault-real-8"
66	ce107	1.2
67	jmc	1.14	if test "x$IEEE" = x ; then #- with optimisation:
68			#- full optimisation
69	ce107	1.3	FOPTIM='-O3 -funroll-loops'
70	jmc	1.14	NOOPTFILES="$NOOPTFILES ini_masks_etc.F"
71			#- can use -O2 (safe optimisation) to avoid Pb with some gcc version of -O3:
72			#FOPTIM='-O2 -funroll-loops'
73	edhill	1.1	else
74	jmc	1.14	# these may also be useful, but require specific gfortran versions:
75			# -Wnonstd-intrinsics for gfortran <= 4.3
76			# -Wintrinsics-std for gfortran >= 4.4
77			# -Wno-tabs for gfortran >= 4.3
78	jahn	1.6	FFLAGS="$FFLAGS -Waliasing -Wampersand -Wsurprising -Wline-truncation"
79	jmc	1.14	#- to get plenty of warnings: -Wall -Wextra (older form: -Wall -W) or:
80			#FFLAGS="$FFLAGS -Wconversion -Wimplicit-interface -Wunused-labels"
81			if test "x$DEVEL" = x ; then #- no optimisation + IEEE :
82			FOPTIM='-O0'
83			else #- development/check options:
84	jmc	1.17	FOPTIM='-O0 -g -fbounds-check'
85			FOPTIM="$FOPTIM -ffpe-trap=invalid,zero,overflow -finit-real=inf"
86	jmc	1.14	fi
87	edhill	1.1	fi
88	jmc	1.14
89	ce107	1.2	F90FLAGS=$FFLAGS
90			F90OPTIM=$FOPTIM
91	jmc	1.10	CFLAGS='-O0 -fPIC'
92	ce107	1.2
93	jmc	1.14	INCLUDEDIRS=''
94			INCLUDES=''
95			LIBS=''
96
97	ce107	1.2	if [ "x$NETCDF_ROOT" != x ] ; then
98			INCLUDEDIR="${NETCDF_ROOT}/include"
99			INCLUDES="-I${NETCDF_ROOT}/include"
100			LIBDIR="${NETCDF_ROOT}/lib"
101			LIBS="-L${NETCDF_ROOT}/lib"
102			elif [ "x$NETCDF_HOME" != x ]; then
103			INCLUDEDIR="${NETCDF_HOME}/include"
104			INCLUDES="-I${NETCDF_HOME}/include"
105			LIBDIR="${NETCDF_HOME}/lib"
106			LIBS="-L${NETCDF_HOME}/lib"
107			elif [ "x$NETCDF_INC" != x -a "x$NETCDF_LIB" != x ]; then
108			NETCDF_INC=`echo $NETCDF_INC \| sed 's/-I//g'`
109			NETCDF_LIB=`echo $NETCDF_LIB \| sed 's/-L//g'`
110			INCLUDEDIR="${NETCDF_INC}"
111			INCLUDES="-I${NETCDF_INC}"
112			LIBDIR="${NETCDF_LIB}"
113			LIBS="-L${NETCDF_LIB}"
114			elif [ "x$NETCDF_INCDIR" != x -a "x$NETCDF_LIBDIR" != x ]; then
115			INCLUDEDIR="${NETCDF_INCDIR}"
116			INCLUDES="-I${NETCDF_INCDIR}"
117			LIBDIR="${NETCDF_LIBDIR}"
118			LIBS="-L${NETCDF_LIBDIR}"
119			elif test -d /usr/include/netcdf-3 ; then
120	edhill	1.1	INCLUDES='-I/usr/include/netcdf-3'
121			LIBS='-L/usr/lib/netcdf-3 -L/usr/lib64/netcdf-3'
122			elif test -d /usr/include/netcdf ; then
123			INCLUDES='-I/usr/include/netcdf'
124			elif test -d /usr/local/netcdf ; then
125			INCLUDES='-I/usr/local/netcdf/include'
126			LIBS='-L/usr/local/netcdf/lib'
127	ce107	1.2	elif test -d /usr/local/include/netcdf.inc ; then
128			INCLUDES='-I/usr/local/include'
129			LIBS='-L/usr/local/lib64'
130	mlosch	1.16	elif test -d /usr/include/netcdf.inc ; then
131			INCLUDES='-I/usr/include'
132			LIBS='-L/usr/lib64'
133	edhill	1.1	fi
134	jmc	1.14
135			if [ -n "$MPI_INC_DIR" -a "x$MPI" = xtrue ] ; then
136			INCLUDES="$INCLUDES -I$MPI_INC_DIR"
137			INCLUDEDIRS="$INCLUDEDIRS $MPI_INC_DIR"
138			MPIINCLUDEDIR="$MPI_INC_DIR"
139			MPI_HEADER_FILES='mpif.h mpiof.h'
140			MPI_HEADER_FILES_INC='./mpi_headers/mpif.h ./mpi_headers/mpiof.h'
141			fi