--- MITgcm/tools/adjoint_options/adjoint_default	2007/10/12 01:32:37	1.15
+++ MITgcm/tools/adjoint_options/adjoint_default	2010/10/04 01:30:13	1.23
@@ -1,6 +1,6 @@
 #!/bin/bash
 #
-#  $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/adjoint_options/adjoint_default,v 1.15 2007/10/12 01:32:37 heimbach Exp $
+#  $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/adjoint_options/adjoint_default,v 1.23 2010/10/04 01:30:13 jmc Exp $
 #  $Name:  $
 #
 
@@ -15,12 +15,12 @@
 TAF=staf
 TAMC=tamc
 
-AD_TAMC_FLAGS='-reverse -admark ad -i4 -r4 -l tamc_ad.log'
-AD_TAF_FLAGS='-version 1.9.8 -z -reverse -admark ad -i4 -r4 -l taf_ad.log -flow taf_ad_flow.log -nonew_arg'
-FTL_TAMC_FLAGS='-forward -ftlmark g_ -i4 -r4 -l tamc_ftl.log'
-FTL_TAF_FLAGS='-z -forward -ftlmark g_ -i4 -r4 -l taf_ftl.log -flow taf_ftl_flow.log -nonew_arg'
-SVD_TAMC_FLAGS='-reverse -forward -pure -i4 -r4 -l tamc_svd.log'
-SVD_TAF_FLAGS='-z -reverse -forward -pure -i4 -r4 -l taf_svd.log -flow taf_flow.log -nonew_arg'
+AD_TAMC_FLAGS="-reverse -admark ad -i4 -r4 -l tamc_ad.log $AD_TAMC_FLAGS"
+AD_TAF_FLAGS="-v1 -reverse -admark ad -i4 -r4 -l taf_ad.log -flow taf_ad_flow.log $AD_TAF_FLAGS"
+FTL_TAMC_FLAGS="-forward -ftlmark g_ -i4 -r4 -l tamc_ftl.log $FTL_TAMC_FLAGS"
+FTL_TAF_FLAGS="-v1 -forward -ftlmark g_ -i4 -r4 -l taf_ftl.log -flow taf_ftl_flow.log $FTL_TAF_FLAGS"
+SVD_TAMC_FLAGS="-reverse -forward -pure -i4 -r4 -l tamc_svd.log $SVD_TAMC_FLAGS"
+SVD_TAF_FLAGS="-v1 -reverse -forward -pure -i4 -r4 -l taf_svd.log -flow taf_flow.log $SVD_TAF_FLAGS"
 
 DIFF_FLAGS="-toplevel 'the_main_loop'    \
             -input 'xx_theta_dummy       \
@@ -52,6 +52,8 @@
                     xx_depth_dummy       \
                     xx_diffkr_dummy      \
                     xx_kapgm_dummy       \
+                    xx_kapredi_dummy       \
+                    xx_bottomdrag_dummy  \
                     xx_efluxy_dummy      \
                     xx_efluxp_dummy      \
                     xx_edtaux_dummy      \