Annotation of /MITgcm/tools/adjoint_options/adjoint_default

#!/bin/bash
#
#  $Header: /u/gcmpack/MITgcm/tools/adjoint_options/adjoint_default,v 1.32 2013/08/07 16:20:03 heimbach Exp $
#  $Name:  $

#  This AD option-file contains the default settings for the adjoint and
#  tangent-linear compilers.  If you need to change these settings,
#  please make a separate (local) copy of this file.

# TAMC=/data43/ralf/tamc/tamc
# TAF=~fastopt/bin/taf
# STAF=staf

TAF=staf
TAMC=tamc

AD_TAMC_FLAGS="-reverse -admark ad -i4 -r4 -l tamc_ad.log $AD_TAMC_FLAGS"
FTL_TAMC_FLAGS="-forward -ftlmark g_ -i4 -r4 -l tamc_ftl.log $FTL_TAMC_FLAGS"
SVD_TAMC_FLAGS="-reverse -forward -pure -i4 -r4 -l tamc_svd.log $SVD_TAMC_FLAGS"

AD_TAF_FLAGS="-reverse -server fastopt.net -i4 -r4 -intrinsic system,flush -l taf_ad.log $AD_TAF_FLAGS"
FTL_TAF_FLAGS="-forward -server fastopt.net -i4 -r4 -intrinsic system,flush -l taf_ftl.log $FTL_TAF_FLAGS"
SVD_TAF_FLAGS="-reverse -forward -pure -server fastopt.net -i4 -r4 -intrinsic system,flush -l taf_svd.log $SVD_TAF_FLAGS"

if test "x$MPI" != x ; then
  AD_TAF_FLAGS="$AD_TAF_FLAGS"' -include $(LOCAL_MPI_HEADERS) -I./mpi_headers/'
  FLT_TAF_FLAGS="$FLT_TAF_FLAGS"' -include $(LOCAL_MPI_HEADERS) -I./mpi_headers/'
  SVD_TAF_FLAGS="$SVD_TAF_FLAGS"' -include $(LOCAL_MPI_HEADERS) -I./mpi_headers/'
fi

DIFF_FLAGS="-toplevel 'the_main_loop'    \
            -input 'xx_theta_dummy       \
                    xx_salt_dummy        \
                    xx_tr1_dummy         \
                    xx_hflux_dummy       \
                    xx_sflux_dummy       \
                    xx_tauu_dummy        \
                    xx_tauv_dummy        \
                    xx_atemp_dummy       \
                    xx_aqh_dummy         \
                    xx_precip_dummy      \
                    xx_swflux_dummy      \
                    xx_swdown_dummy      \
                    xx_lwflux_dummy      \
                    xx_lwdown_dummy      \
                    xx_evap_dummy        \
                    xx_snowprecip_dummy  \
                    xx_apressure_dummy   \
                    xx_runoff_dummy      \
                    xx_uwind_dummy       \
                    xx_vwind_dummy       \
                    xx_obcsn_dummy       \
                    xx_obcss_dummy       \
                    xx_obcsw_dummy       \
                    xx_obcse_dummy       \
                    xx_sst_dummy         \
                    xx_sss_dummy         \
                    xx_depth_dummy       \
                    xx_diffkr_dummy      \
                    xx_kapgm_dummy       \
                    xx_kapredi_dummy     \
                    xx_bottomdrag_dummy  \
                    xx_efluxy_dummy      \
                    xx_efluxp_dummy      \
                    xx_edtaux_dummy      \
                    xx_edtauy_dummy      \
                    xx_uvel_dummy        \
                    xx_vvel_dummy        \
                    xx_etan_dummy        \
                    xx_gen2d_dummy       \
                    xx_gen3d_dummy       \
                    xx_genarr2d_dummy    \
                    xx_genarr3d_dummy    \
                    xx_gentim2d_dummy    \
                    xx_siarea_dummy      \
                    xx_siheff_dummy      \
                    xx_sihsnow_dummy     \
                    xx_shifwflx_dummy    \
                    xx_relaxsst_dummy    \
                    xx_relaxsss_dummy    \
                    xx_atemp_mean_dummy  \
                    xx_aqh_mean_dummy    \
                    xx_precip_mean_dummy \
                    xx_swdown_mean_dummy \
                    xx_uwind_mean_dummy  \
                    xx_vwind_mean_dummy' \
            -output 'fc'"

AD_TAMC_FLAGS="$AD_TAMC_FLAGS $DIFF_FLAGS"
AD_TAF_FLAGS="$AD_TAF_FLAGS   $DIFF_FLAGS"

FTL_TAMC_FLAGS="$FTL_TAMC_FLAGS $DIFF_FLAGS"
FTL_TAF_FLAGS="$FTL_TAF_FLAGS   $DIFF_FLAGS"

SVD_TAMC_FLAGS="$SVD_TAMC_FLAGS $DIFF_FLAGS"
SVD_TAF_FLAGS="$SVD_TAF_FLAGS   $DIFF_FLAGS"
1	edhill	1.2	#!/bin/bash
2			#
3	jmc	1.33	# $Header: /u/gcmpack/MITgcm/tools/adjoint_options/adjoint_default,v 1.32 2013/08/07 16:20:03 heimbach Exp $
4	edhill	1.2	# $Name: $
5
6	jmc	1.28	# This AD option-file contains the default settings for the adjoint and
7	edhill	1.2	# tangent-linear compilers. If you need to change these settings,
8			# please make a separate (local) copy of this file.
9
10	edhill	1.5	# TAMC=/data43/ralf/tamc/tamc
11			# TAF=~fastopt/bin/taf
12	edhill	1.2	# STAF=staf
13	edhill	1.5
14	heimbach	1.12	TAF=staf
15	edhill	1.5	TAMC=tamc
16	edhill	1.2
17	jmc	1.20	AD_TAMC_FLAGS="-reverse -admark ad -i4 -r4 -l tamc_ad.log $AD_TAMC_FLAGS"
18	jmc	1.33	FTL_TAMC_FLAGS="-forward -ftlmark g_ -i4 -r4 -l tamc_ftl.log $FTL_TAMC_FLAGS"
19			SVD_TAMC_FLAGS="-reverse -forward -pure -i4 -r4 -l tamc_svd.log $SVD_TAMC_FLAGS"
20
21	heimbach	1.32	AD_TAF_FLAGS="-reverse -server fastopt.net -i4 -r4 -intrinsic system,flush -l taf_ad.log $AD_TAF_FLAGS"
22			FTL_TAF_FLAGS="-forward -server fastopt.net -i4 -r4 -intrinsic system,flush -l taf_ftl.log $FTL_TAF_FLAGS"
23			SVD_TAF_FLAGS="-reverse -forward -pure -server fastopt.net -i4 -r4 -intrinsic system,flush -l taf_svd.log $SVD_TAF_FLAGS"
24	edhill	1.2
25	jmc	1.33	if test "x$MPI" != x ; then
26			AD_TAF_FLAGS="$AD_TAF_FLAGS"' -include $(LOCAL_MPI_HEADERS) -I./mpi_headers/'
27			FLT_TAF_FLAGS="$FLT_TAF_FLAGS"' -include $(LOCAL_MPI_HEADERS) -I./mpi_headers/'
28			SVD_TAF_FLAGS="$SVD_TAF_FLAGS"' -include $(LOCAL_MPI_HEADERS) -I./mpi_headers/'
29			fi
30
31	edhill	1.2	DIFF_FLAGS="-toplevel 'the_main_loop' \
32			-input 'xx_theta_dummy \
33			xx_salt_dummy \
34			xx_tr1_dummy \
35			xx_hflux_dummy \
36			xx_sflux_dummy \
37			xx_tauu_dummy \
38			xx_tauv_dummy \
39	heimbach	1.6	xx_atemp_dummy \
40			xx_aqh_dummy \
41	heimbach	1.8	xx_precip_dummy \
42	heimbach	1.9	xx_swflux_dummy \
43	heimbach	1.10	xx_swdown_dummy \
44	heimbach	1.13	xx_lwflux_dummy \
45			xx_lwdown_dummy \
46			xx_evap_dummy \
47			xx_snowprecip_dummy \
48			xx_apressure_dummy \
49			xx_runoff_dummy \
50	heimbach	1.6	xx_uwind_dummy \
51			xx_vwind_dummy \
52			xx_obcsn_dummy \
53			xx_obcss_dummy \
54			xx_obcsw_dummy \
55			xx_obcse_dummy \
56	edhill	1.2	xx_sst_dummy \
57			xx_sss_dummy \
58	heimbach	1.12	xx_depth_dummy \
59	edhill	1.2	xx_diffkr_dummy \
60			xx_kapgm_dummy \
61	mlosch	1.24	xx_kapredi_dummy \
62	gforget	1.18	xx_bottomdrag_dummy \
63	edhill	1.2	xx_efluxy_dummy \
64	heimbach	1.7	xx_efluxp_dummy \
65			xx_edtaux_dummy \
66			xx_edtauy_dummy \
67			xx_uvel_dummy \
68			xx_vvel_dummy \
69			xx_etan_dummy \
70	jmc	1.28	xx_gen2d_dummy \
71			xx_gen3d_dummy \
72	heimbach	1.29	xx_genarr2d_dummy \
73			xx_genarr3d_dummy \
74	heimbach	1.30	xx_gentim2d_dummy \
75	mlosch	1.24	xx_siarea_dummy \
76			xx_siheff_dummy \
77			xx_sihsnow_dummy \
78			xx_shifwflx_dummy \
79	heimbach	1.7	xx_relaxsst_dummy \
80	heimbach	1.27	xx_relaxsss_dummy \
81			xx_atemp_mean_dummy \
82			xx_aqh_mean_dummy \
83			xx_precip_mean_dummy \
84			xx_swdown_mean_dummy \
85			xx_uwind_mean_dummy \
86	jmc	1.28	xx_vwind_mean_dummy' \
87	edhill	1.2	-output 'fc'"
88
89			AD_TAMC_FLAGS="$AD_TAMC_FLAGS $DIFF_FLAGS"
90			AD_TAF_FLAGS="$AD_TAF_FLAGS $DIFF_FLAGS"
91
92			FTL_TAMC_FLAGS="$FTL_TAMC_FLAGS $DIFF_FLAGS"
93			FTL_TAF_FLAGS="$FTL_TAF_FLAGS $DIFF_FLAGS"
94
95			SVD_TAMC_FLAGS="$SVD_TAMC_FLAGS $DIFF_FLAGS"
96			SVD_TAF_FLAGS="$SVD_TAF_FLAGS $DIFF_FLAGS"