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o fix the default for PTRACERS_dumpFreq (accidently set to taveFreq; interesting that nobody noticed, after all this meant no output by default )
o fix IO flag error introduced by me (EH3) and found by JMC
implement Implicit Vertical advection for pTracers
o collect all ptracers output in an new routine (PTRACERS_OUTPUT) that is called from DO_THE_MODEL_IO - rename PTRACERS_STATV_WRITE to PTRACERS_WRITE_TIMEAVE - introduce new parameter PTRACERS_dumpFreq (defaults to dumpFreq) - clean up PTRACERS_WRITE_TIMEAVE a little
o PTRACERS:
- rename GCHEM_MONITOR to PTRACERS_MONITOR and call it from MONITOR, so
that ALL experiments with ptracers enable can be checked. This makes
GCHEM_MONITOR obsolete.
- include a runtime parameter PTRACERS_monitorFreq that defaults to
monitorFreq
- set default PTRACERS_write_mdsio to false if PTRACERS_write_mnc is true
print out ptracers parameters
set a vertical profile of vertical diffusivity for each tracer (but not yet used !)
o remove all the *_ioinc flags and replace them with the single global outputTypesInclusive flag
allow to set a vertical profile of vertical diffusivity for T & S
o move useMNC and related runtime switches to PARAMS.h
o overhaul of IO so that we now have flags for MDSIO and/or MNC
- all verification tests compile and run with linux_ia32_g77
- defaults are compatible with current input files--nothing
should change if you were not previously using MNC
- MNC output has been added in numerous places (eg. timeave)
but there are still a few writes not yet do-able with MNC
(this is in progress)
- flags now allow for either/or/both use of MDSIO and MNC and
documentation will soon follow
- numerous small formatting cleanups for ProTeX
o first steps towards MNC-ification of PTRACERS - compiles and runs with linux_ia32_g77 - only outputs instantaneous tracer fields (so far!)
max number of passive tracers is now defined in PTRACERS_SIZE.h
o modifications to make FREEZE flux visible to pkg/kpp
- moved surfaceTendencyTice from pkg/seaice to main code
- FREEZE moved to FORWARD_STEP
- subroutine FREEZE now limits only surface temperature
this means new output.txt for global_ocean.90x40x15,
global_ocean.cs32x15, and global_with_exf, but note
that results for these three experiments remain
bit-identical to before if allowFreezing=.FALSE.
o added surface flux output variables to TIMEAVE_STATVARS
o time-averaged output for pkg/ptracers
I/O bug fixes
checkpoint51f_post
o Added on-the-fly spatial interpolation capability
"USE_EXF_INTERPOLATION" to pkg/exf.
This is a temporary Cartesian-grid hack until
the super-duper ESMF coupler becomes available.
Usage example is in verification/global_with_exf.
o Bug fix to pkg/ptracers, pkg/generic_advdiff/gad_calc_rhs.F,
and pkg/kpp/kpp_transport_ptr.F for dealing with tracer
non-local transport term.
Added PTRACERS package
This allows an arbitrary number of passive tracers to be integrated
forward simultaneously with the dynamicaly model.
+ Implemented so far:
- basic forward algorithm (time-stepping, advection, diffusion, convection)
- I/O and checkpointing
- GM/Redi *but* using the GM/Redi coefficient of Salt
+ Not implemented so far:
- KPP
- OBCS
+ No specific example supplied (yet) but global_ocean.90x40x15 has the
necessary data.ptracer file. Simply use -enable=ptracers and uncomment
line in data.pkg. PTRACER01 then reproduces Salt exactly.
+ This package is disabled by default since it increases storage.
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