C $Header: /home/ubuntu/mnt/e9_copy/MITgcm/pkg/mnc/mnc_file.F,v 1.24 2008/06/20 20:36:58 utke Exp $ C $Name: $ #include "MNC_OPTIONS.h" C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 0 C !ROUTINE: MNC_FILE_CREATE C !INTERFACE: SUBROUTINE MNC_FILE_CREATE( I fname, I myThid ) C !DESCRIPTION: C Create a NetCDF file. C !USES: implicit none C !INPUT PARAMETERS: integer myThid character*(*) fname CEOP C !LOCAL VARIABLES: integer indf CALL MNC_FILE_OPEN(fname, 0, indf, myThid) RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 0 C !ROUTINE: MNC_FILE_OPEN C !INTERFACE: SUBROUTINE MNC_FILE_OPEN( I fname, I itype, O indf, I myThid ) C !DESCRIPTION: C Open or create a NetCDF file. C !USES: implicit none #include "MNC_COMMON.h" #include "EEPARAMS.h" #include "netcdf.inc" C !INPUT PARAMETERS: integer myThid,indf character*(*) fname integer itype C itype => [ 0=new | 1=append | 2=read-only ] CEOP C !LOCAL VARIABLES: integer n, err, fid, nf character*(MAX_LEN_MBUF) msgbuf C Functions integer ILNBLNK C Is the file already open? nf = ILNBLNK(fname) CALL MNC_GET_IND(MNC_MAX_FID, fname,mnc_f_names,indf,myThid) IF (indf .GT. 0) THEN write(msgbuf,'(3a)') 'MNC_FILE_OPEN ERROR: ''', fname(1:nf), & ''' is already open -- cannot open twice' CALL print_error(msgbuf, mythid) stop 'ABNORMAL END: package MNC' ENDIF write(msgbuf,'(3a)') 'opening ''', fname(1:nf), '''' IF (itype .EQ. 0) THEN C Create new file err = NF_CREATE(fname, NF_CLOBBER, fid) CALL MNC_HANDLE_ERR(err, msgbuf, myThid) ELSEIF (itype .EQ. 1) THEN C Append to existing file CALL MNC_FILE_READALL(fname, myThid) ELSE C Error write(msgbuf,'(a,i5,a)') 'MNC_FILE_OPEN ERROR: ''', itype, & ''' is not defined--should be: [0|1]' CALL print_error( msgbuf, mythid ) stop 'ABNORMAL END: S/R MNC_FILE_ADD_ATTR_STR' ENDIF CALL MNC_GET_NEXT_EMPTY_IND(MNC_MAX_FID, mnc_f_names, & 'mnc_f_names', indf, myThid) n = ILNBLNK(fname) mnc_f_names(indf)(1:n) = fname(1:n) mnc_f_info(indf,1) = 1 mnc_f_info(indf,2) = fid mnc_f_info(indf,3) = 0 mnc_fv_ids(indf,1) = 0 mnc_f_alld(indf,1) = 0 RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 0 C !ROUTINE: MNC_FILE_ADD_ATTR_STR C !INTERFACE: SUBROUTINE MNC_FILE_ADD_ATTR_STR( I fname, I atname, I sval, I myThid ) C !DESCRIPTION: C Add a character string attribute to a NetCDF file. C !USES: implicit none C !INPUT PARAMETERS: integer myThid character*(*) fname, atname, sval CEOP real*4 sZero sZero = 0. CALL MNC_FILE_ADD_ATTR_ANY(fname,atname, 1, & sval, 0, 0.0D0, sZero, 0, myThid ) RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 0 C !ROUTINE: MNC_FILE_ADD_ATTR_DBL C !INTERFACE: SUBROUTINE MNC_FILE_ADD_ATTR_DBL( I fname, I atname, I len, I dval, I myThid ) C !DESCRIPTION: C Add a double-precision real attribute to a NetCDF file. C !USES: implicit none C !INPUT PARAMETERS: integer myThid, len character*(*) fname, atname REAL*8 dval CEOP real*4 sZero sZero = 0. CALL MNC_FILE_ADD_ATTR_ANY(fname,atname, 2, & ' ', len, dval, sZero, 0, myThid ) RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 0 C !ROUTINE: MNC_FILE_ADD_ATTR_REAL C !INTERFACE: SUBROUTINE MNC_FILE_ADD_ATTR_REAL( I fname, I atname, I len, I rval, I myThid ) C !DESCRIPTION: C Add a single-precision real attribute to a NetCDF file. C !USES: implicit none C !INPUT PARAMETERS: integer myThid, len character*(*) fname, atname REAL*4 rval CEOP CALL MNC_FILE_ADD_ATTR_ANY(fname,atname, 3, & ' ', len, 0.0D0, rval, 0, myThid ) RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 0 C !ROUTINE: MNC_FILE_ADD_ATTR_INT C !INTERFACE: SUBROUTINE MNC_FILE_ADD_ATTR_INT( I fname, I atname, I len, I ival, I myThid ) C !DESCRIPTION: C Add an integer attribute to a NetCDF file. C !USES: implicit none C !INPUT PARAMETERS: integer myThid, len, ival character*(*) fname, atname CEOP real*4 sZero sZero = 0. CALL MNC_FILE_ADD_ATTR_ANY(fname,atname, 4, & ' ', len, 0.0D0, sZero, ival, myThid ) RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 1 C !ROUTINE: MNC_FILE_ADD_ATTR_ANY C !INTERFACE: SUBROUTINE MNC_FILE_ADD_ATTR_ANY( I fname, I atname, I atype, sv, len,dv,rv,iv, I myThid ) C !DESCRIPTION: C Add all attributes to a NetCDF file. C !USES: implicit none #include "MNC_COMMON.h" #include "EEPARAMS.h" #include "netcdf.inc" C !INPUT PARAMETERS: integer myThid, atype, len, iv character*(*) fname, atname, sv REAL*8 dv REAL*4 rv CEOP C !LOCAL VARIABLES: integer n, nf, err, fid, ind, n1, lens character*(MNC_MAX_CHAR) s1 character*(MAX_LEN_MBUF) msgbuf C Functions integer ILNBLNK C Verify that the file is open CALL MNC_GET_IND(MNC_MAX_FID, fname, mnc_f_names, ind, myThid) IF (ind .LT. 0) THEN nf = ILNBLNK( fname ) write(msgbuf,'(3a)') 'MNC ERROR: file ''', & fname(1:nf), ''' must be opened first' CALL print_error( msgbuf, mythid ) stop 'ABNORMAL END: S/R MNC_FILE_ADD_ATTR_INT' ENDIF fid = mnc_f_info(ind,2) C Enter define mode CALL MNC_FILE_REDEF(fname, myThid) s1(1:MNC_MAX_CHAR) = mnc_blank_name(1:MNC_MAX_CHAR) n1 = ILNBLNK(atname) s1(1:n1) = atname(1:n1) IF (atype .EQ. 1) THEN lens = ILNBLNK(sv) err = NF_PUT_ATT_TEXT(fid, NF_GLOBAL, s1, lens, sv) CALL MNC_HANDLE_ERR(err, & 'adding TEXT attribute in S/R MNC_FILE_ADD_ATTR_ANY', & myThid) ELSEIF (atype .EQ. 2) THEN err = NF_PUT_ATT_DOUBLE(fid, NF_GLOBAL, s1, NF_DOUBLE, len, dv) CALL MNC_HANDLE_ERR(err, & 'adding DOUBLE attribute in S/R MNC_FILE_ADD_ATTR_ANY', & myThid) ELSEIF (atype .EQ. 3) THEN err = NF_PUT_ATT_REAL(fid, NF_GLOBAL, s1, NF_FLOAT, len, rv) CALL MNC_HANDLE_ERR(err, & 'adding REAL attribute in S/R MNC_FILE_ADD_ATTR_ANY', & myThid) ELSEIF (atype .EQ. 4) THEN err = NF_PUT_ATT_INT(fid, NF_GLOBAL, s1, NF_INT, len, iv) CALL MNC_HANDLE_ERR(err, & 'adding INT attribute in S/R MNC_FILE_ADD_ATTR_ANY', & myThid) ELSE write(msgbuf,'(a,i10,a)') 'MNC ERROR: atype = ''', atype, & ''' is invalid--must be: [1-4]' n = ILNBLNK(msgbuf) CALL print_error(msgbuf(1:n), mythid) stop 'ABNORMAL END: S/R MNC_VAR_ADD_ATTR_ANY' ENDIF RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 1 C !ROUTINE: MNC_FILE_CLOSE C !INTERFACE: SUBROUTINE MNC_FILE_CLOSE( I fname, I myThid ) C !DESCRIPTION: C Close a NetCDF file. C !USES: implicit none #include "MNC_COMMON.h" #include "EEPARAMS.h" #include "netcdf.inc" C !INPUT PARAMETERS: integer myThid character*(*) fname CEOP C !LOCAL VARIABLES: integer i,j,k,n, err, fid, indf, nf character*(MAX_LEN_MBUF) msgbuf C Functions integer ILNBLNK nf = ILNBLNK(fname) C Check that the file is open CALL MNC_GET_IND(MNC_MAX_FID, fname, mnc_f_names, indf, myThid) IF (indf .LT. 1) THEN write(msgbuf,'(3a)') 'MNC Warning: file ''', fname(1:nf), & ''' is already closed' CALL print_error( msgbuf, mythid ) RETURN ENDIF fid = mnc_f_info(indf,2) err = NF_CLOSE(fid) write(msgbuf,'(3a)') ' cannot close file ''', fname(1:nf), '''' CALL MNC_HANDLE_ERR(err, msgbuf, myThid) C Clear all the info associated with this file C variables n = mnc_fv_ids(indf,1) IF (n .GE. 1) THEN DO i = 1,n j = 2 + 3*(i - 1) k = mnc_fv_ids(indf,j) mnc_v_names(k)(1:MNC_MAX_CHAR)=mnc_blank_name(1:MNC_MAX_CHAR) ENDDO DO i = 1,MNC_MAX_INFO mnc_fv_ids(indf,i) = 0 ENDDO ENDIF C dims n = mnc_f_alld(indf,1) mnc_f_alld(indf,1) = 0 DO i = 1,n j = mnc_f_alld(indf,i+1) mnc_d_ids(j) = 0 mnc_d_size(j) = 0 mnc_d_names(j)(1:MNC_MAX_CHAR) = mnc_blank_name(1:MNC_MAX_CHAR) mnc_f_alld(indf,i+1) = 0 ENDDO C grids n = mnc_f_info(indf,3) IF (n .GT. 0) THEN DO i = 1,n j = 4 + 3*(i - 1) k = mnc_f_info(indf,j) mnc_g_names(k)(1:MNC_MAX_CHAR)=mnc_blank_name(1:MNC_MAX_CHAR) ENDDO DO i = 1,MNC_MAX_INFO mnc_fd_ind(indf,i) = 0 mnc_f_info(indf,i) = 0 ENDDO ENDIF C file name DO i = 1,MNC_MAX_PATH mnc_f_names(indf)(i:i) = ' ' ENDDO RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 0 C !ROUTINE: MNC_FILE_CLOSE_ALL_MATCHING C !INTERFACE: SUBROUTINE MNC_FILE_CLOSE_ALL_MATCHING( I fname, I myThid ) C !DESCRIPTION: C Close all files matching a character string. C !USES: implicit none #include "MNC_COMMON.h" #include "EEPARAMS.h" #include "netcdf.inc" C !INPUT PARAMETERS: integer myThid character*(*) fname CEOP C !LOCAL VARIABLES: integer i,n C Functions integer ILNBLNK n = ILNBLNK(fname) DO i = 1,MNC_MAX_FID C Check that the file is open IF (fname(1:n) .EQ. mnc_f_names(i)(1:n)) THEN CALL MNC_FILE_CLOSE(mnc_f_names(i), myThid) ENDIF ENDDO RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 0 C !ROUTINE: MNC_FILE_CLOSE_ALL C !INTERFACE: SUBROUTINE MNC_FILE_CLOSE_ALL( I myThid ) C !DESCRIPTION: C Close all NetCDF files. C !USES: implicit none #include "MNC_COMMON.h" #include "EEPARAMS.h" #include "netcdf.inc" C !INPUT PARAMETERS: integer myThid CEOP C !LOCAL VARIABLES: integer i character*(MNC_MAX_PATH) bpath DO i = 1,MNC_MAX_PATH bpath(i:i) = ' ' ENDDO DO i = 1,MNC_MAX_FID C Check that the file is open IF (mnc_f_names(i)(1:MNC_MAX_PATH) & .NE. bpath(1:MNC_MAX_PATH)) THEN CALL MNC_FILE_CLOSE(mnc_f_names(i), myThid) ENDIF ENDDO RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 0 C !ROUTINE: MNC_FILE_REDEF C !INTERFACE: SUBROUTINE MNC_FILE_REDEF( I fname, I myThid ) C !DESCRIPTION: C Set the NetCDF file to DEFINE mode. C !USES: implicit none #include "MNC_COMMON.h" #include "EEPARAMS.h" #include "netcdf.inc" C !INPUT PARAMETERS: integer myThid character*(*) fname CEOP C !LOCAL VARIABLES: integer ind, fid, def, err, n character*(MAX_LEN_MBUF) msgbuf C Functions integer ILNBLNK C Verify that the file is open CALL MNC_GET_IND(MNC_MAX_FID, fname, mnc_f_names, ind, myThid) IF (ind .LT. 0) THEN n = ILNBLNK(fname) write(msgbuf,'(3a)') 'MNC ERROR: file ''', & fname(1:n), ''' must be opened first' CALL print_error( msgbuf, mythid ) stop 'ABNORMAL END: S/R MNC_FILE_REDEF' ENDIF def = mnc_f_info(ind,1) fid = mnc_f_info(ind,2) IF (def .NE. 1) THEN C Enter define mode err = NF_REDEF(fid) CALL MNC_HANDLE_ERR(err, & 'entering define mode in S/R MNC_FILE_REDEF', myThid) mnc_f_info(ind,1) = 1 ENDIF RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 0 C !ROUTINE: MNC_FILE_ENDDEF C !INTERFACE: SUBROUTINE MNC_FILE_ENDDEF( I fname, I myThid ) C !DESCRIPTION: C End DEFINE mode for a NetCDF file. C !USES: implicit none #include "MNC_COMMON.h" #include "EEPARAMS.h" #include "netcdf.inc" C !INPUT PARAMETERS: integer myThid character*(*) fname CEOP C !LOCAL VARIABLES: integer ind, fid, def, err, n character*(MAX_LEN_MBUF) msgbuf C Functions integer ILNBLNK C Verify that the file is open CALL MNC_GET_IND(MNC_MAX_FID, fname, mnc_f_names, ind, myThid) IF (ind .LT. 0) THEN n = ILNBLNK(fname) write(msgbuf,'(3a)') 'MNC ERROR: file ''', & fname(1:n), ''' must be opened first' CALL print_error( msgbuf, mythid ) stop 'ABNORMAL END: S/R MNC_FILE_REDEF' ENDIF def = mnc_f_info(ind,1) fid = mnc_f_info(ind,2) IF (def .NE. 2) THEN C Enter define mode err = NF_ENDDEF(fid) CALL MNC_HANDLE_ERR(err, & 'ending define mode in S/R MNC_FILE_ENDDEF', myThid) mnc_f_info(ind,1) = 2 ENDIF RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 1 C !ROUTINE: MNC_FILE_READALL C !INTERFACE: SUBROUTINE MNC_FILE_READALL( I fname, I myThid ) C !DESCRIPTION: C Try to open and read a NetCDF file. C !USES: implicit none #include "EEPARAMS.h" #include "netcdf.inc" C !INPUT PARAMETERS: integer myThid character*(*) fname CEOP C Functions integer IFNBLNK, ILNBLNK C Local Variables integer ierr, nff,nlf, indf character*(MAX_LEN_MBUF) msgbuf nff = IFNBLNK(fname) nlf = ILNBLNK(fname) CALL MNC_FILE_TRY_READ(fname, ierr, indf, myThid) write(msgbuf,'(3a)') 'MNC ERROR: cannot open file ''', & fname(nff:nlf), ''' for read/write access' CALL MNC_HANDLE_ERR(ierr, msgbuf, myThid) RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| CBOP 1 C !ROUTINE: MNC_FILE_TRY_READ C !INTERFACE: SUBROUTINE MNC_FILE_TRY_READ( I fname, O ierr, O indf, I myThid ) C !DESCRIPTION: C Try to open and read a NetCDF file. C !USES: implicit none #include "MNC_COMMON.h" #include "EEPARAMS.h" #include "netcdf.inc" C !INPUT PARAMETERS: integer myThid, ierr, indf character*(*) fname C !LOCAL VARIABLES: integer i,j,k, fid, err, ndim,nvar,ngat,unlimid integer dlen, id, xtype, nat, nff,nlf, iv integer ndv, did, ns,ne, n1,n2, indg, indv character*(MAX_LEN_MBUF) msgbuf character*(NF_MAX_NAME) name integer idlist(NF_MAX_VAR_DIMS) character*(MNC_MAX_CHAR) dnames(20) CEOP C Functions integer IFNBLNK, ILNBLNK C Open and save the filename and fID nff = IFNBLNK(fname) nlf = ILNBLNK(fname) err = NF_OPEN(fname, NF_WRITE, fid) ierr = NF_NOERR IF (err .NE. NF_NOERR) THEN ierr = err RETURN ENDIF CALL MNC_GET_NEXT_EMPTY_IND(MNC_MAX_FID, mnc_f_names, & 'mnc_f_names', indf, myThid) mnc_f_names(indf)(1:(nlf-nff+1)) = fname(nff:nlf) mnc_f_info(indf,2) = fid C Get the overall number of entities err = NF_INQ(fid, ndim, nvar, ngat, unlimid) write(msgbuf,'(4a)') 'MNC ERROR: cannot read number of dims', & ' in file ''', fname(nff:nlf), '''' CALL MNC_HANDLE_ERR(err, msgbuf, myThid) C Read each dimension and save the information DO id = 1,ndim err = NF_INQ_DIM(fid, id, name, dlen) write(msgbuf,'(2a,i5,3a)') 'MNC ERROR: cannot read dimension', & ' info for dim ''', id, ''' in file ''', & fname(nff:nlf), '''' CALL MNC_HANDLE_ERR(err, msgbuf, myThid) IF (id .EQ. unlimid) THEN dlen = -1 ENDIF ns = IFNBLNK(name) ne = ILNBLNK(name) CALL MNC_DIM_INIT_ALL(fname,name(ns:ne),dlen,'N', myThid) DO i = 1,mnc_f_alld(indf,1) j = mnc_f_alld(indf,i+1) n1 = IFNBLNK(mnc_d_names(j)) n2 = ILNBLNK(mnc_d_names(j)) IF (((ne-ns) .EQ. (n2-n1)) & .AND. (mnc_d_names(j)(ns:ne) .EQ. name(ns:ne))) THEN mnc_d_ids(j) = id goto 10 ENDIF ENDDO 10 CONTINUE ENDDO C Read and save each variable DO id = 1,nvar err = NF_INQ_VAR(fid, id, name, xtype, ndv, idlist, nat) write(msgbuf,'(2a,i5,3a)') 'MNC ERROR: cannot read variable', & ' info for variable ''', id, ''' in file ''', & fname(nff:nlf), '''' CALL MNC_HANDLE_ERR(err, msgbuf, myThid) n1 = IFNBLNK(name) n2 = ILNBLNK(name) C Create a grid for this variable DO i = 1,ndv did = idlist(i) dnames(i)(1:MNC_MAX_CHAR) = mnc_d_names(did)(1:MNC_MAX_CHAR) ENDDO CALL MNC_GRID_INIT_ALL(fname, name, ndv, dnames, indg, myThid) C Update the tables CALL MNC_GET_NEXT_EMPTY_IND(MNC_MAX_ID,mnc_v_names, & 'mnc_v_names', indv,myThid) mnc_v_names(indv)(1:(n2-n1+1)) = name(n1:n2) iv = 2 + 3*mnc_fv_ids(indf,1) mnc_fv_ids(indf,iv) = indv mnc_fv_ids(indf,iv+1) = id DO i = 1,mnc_f_info(indf,3) j = 4 + 3*(i-1) k = mnc_f_info(indf,j) IF (k .EQ. indg) THEN mnc_fv_ids(indf,iv+2) = j GOTO 20 ENDIF ENDDO 20 CONTINUE mnc_fv_ids(indf,1) = mnc_fv_ids(indf,1) + 1 ENDDO RETURN END C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----|