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o add a sequence number to the output file names in preparation for automatic handling of the 2GB NetCDF file size limitation
o overhaul of IO so that we now have flags for MDSIO and/or MNC - all verification tests compile and run with linux_ia32_g77 - defaults are compatible with current input files--nothing should change if you were not previously using MNC - MNC output has been added in numerous places (eg. timeave) but there are still a few writes not yet do-able with MNC (this is in progress) - flags now allow for either/or/both use of MDSIO and MNC and documentation will soon follow - numerous small formatting cleanups for ProTeX
o add header info to both the NetCDF output and the model stdout - requested by Steph
Unnecessary dependence on DYNVARS.h
o more comments for the api_reference (protex)
o new "poster children" for the API reference: - generic_advdiff - mnc
o edit all MNC subroutines so that myThid is the _last_ argument
o small bug-fix on the bi,bj indicies o add some exch2 info to the global attributes
o minor fixes for mnc with exch2 - tested with global_ocean.cs32x15
o fix indexing error in mnc_cw_readwrite.template o add function calls to initialise_fixed.F and write_state.F o add global attributes for w2/exch2
o getting closer to a usable MNC package through the "cw" layer: - numerous bug fixes - global attributes added - improved handling of the unlimited dimension - "cw" can handle variables with up to 7 dimensions - added list of pre-defined grid types
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