/[MITgcm]/MITgcm/pkg/mnc/README.txt
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Contents of /MITgcm/pkg/mnc/README.txt

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Revision 1.5 - (show annotations) (download)
Thu Jan 8 07:24:47 2004 UTC (20 years, 4 months ago) by edhill
Branch: MAIN
CVS Tags: checkpoint52f_post, checkpoint52f_pre
Changes since 1.4: +14 -8 lines
File MIME type: text/plain
 o numerous bug fixes
 o the tests now exercise most of the "MNC_*" API

1
2 API Discussions:
3 ================
4
5 As discussed in our group meeting of 2003-12-17 (AJA, CNH, JMC, AM,
6 PH, EH3), the NetCDF interface should resemble the following FORTRAN
7 subroutines:
8
9 1) "stubs" of the form: MNC_WV_[G|L]2D_R[S|L] ()
10
11 2) MNC_INIT_VGRID( 'V_GRID_TYPE', nx, ny, nz, zc, zg )
12 1 1
13
14 3) MNC_INIT_HGRID( 'H_GRID_TYPE', nx, ny, xc, yc, xg, yg )
15
16 4) MNC_INIT_VAR( 'file', 'Vname', 'Vunits', 'H_GTYPE', 'V_GTYPE', PREC, FillVal )
17
18 5) MNC_WRITE_VAR( 'file', 'Vname', var, bi, bj, myThid )
19
20 This is a reasonable start but its inflexible since it isn't easily
21 generalized to grids with dimensions other than [2,3,4] or grids with
22 non-horizontal orientations (eg. vertical slices).
23
24
25 Generalizing what we would like to write as "variables defined on 1-D
26 to n-D grids", one can imagine a small number of objects containing
27 all the relevant information:
28
29 a dimension: [ name, size, units ]
30 a grid: [ name, 1+ dim-ref ]
31 a variable: [ name, units, *1* grid-ref, data ]
32 an attribute: [ name, units, data ]
33 a NetCDF file: [ name, 0+ attr, 0+ grid-ref, 0+ var-ref ]
34
35 which can then be manipulated (created, associated, destroyed, etc.)
36 using a simple interface such as:
37
38 MNC_INIT( myThid )
39
40 MNC_FILE_CREATE( myThid, fname )
41 MNC_FILE_OPEN( myThid, fname, itype )
42 MNC_FILE_ADD_ATTR_STR( myThid, fname, atname, sval )
43 MNC_FILE_ADD_ATTR_DBL( myThid, fname, atname, len, dval )
44 MNC_FILE_ADD_ATTR_REAL(myThid, fname, atname, len, rval )
45 MNC_FILE_ADD_ATTR_INT( myThid, fname, atname, len, ival )
46 MNC_FILE_ADD_ATTR_ANY( myThid, fname, atname, atype, cs,len,dv,rv,iv )
47 ...
48 MNC_FILE_READ_HEADER( myThid, fname )
49
50 MNC_DIM_INIT( myThid, dname, dunits, dlen )
51 MNC_DIM_REMOVE( myThid, dname )
52
53 MNC_GRID_INIT( myThid, fname, gname, ndim, dnames )
54 MNC_GRID_SET_LL( myThid, fname, gname, type, lats, lons )
55
56 MNC_VAR_INIT_DBL( myThid, fname, gname, vname, units )
57 MNC_VAR_INIT_REAL( myThid, fname, gname, vname, units )
58 MNC_VAR_INIT_INT( myThid, fname, gname, vname, units )
59 MNC_VAR_INIT_ANY( myThid, fname, gname, vname, units, type )
60 MNC_VAR_ADD_ATTR_STR( myThid, fname, vname, atname, nv, sval )
61 MNC_VAR_ADD_ATTR_DBL( myThid, fname, vname, atname, nv, dval )
62 MNC_VAR_ADD_ATTR_REAL( myThid, fname, vname, atname, nv, rval )
63 MNC_VAR_ADD_ATTR_INT( myThid, fname, vname, atname, nv, ival )
64 MNC_VAR_ADD_ATTR_ANY( myThid, fname, vname, atname, atype, cs,len,dv,rv,iv )
65 MNC_VAR_WRITE_DBL( myThid, fname, vname, var )
66 MNC_VAR_WRITE_REAL( myThid, fname, vname, var )
67 MNC_VAR_WRITE_INT( myThid, fname, vname, var )
68 MNC_VAR_WRITE_ANY( myThid, fname, vname, vtype, dv, rv, iv )
69 ...
70 MNC_VAR_READ( myThid, fname, vname, var )
71
72 MNC_FILE_CLOSE( myThid, fname )
73
74 The above interface is powerful yet easy to use (easier than the
75 entire NetCDF interface) since it helps the user keep track of the
76 associations between files, "grids", variables, and dimensions.
77
78
79 To-Do:
80 ======
81
82 1) CNH pointed out that grid interpolation needs to be handled
83 "on-the-fly" since pre-processing would result in overly large
84 input files. We need an interpolation API...

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