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Revision 1.17 - (view) (download) (annotate) - [select for diffs]
Wed Aug 22 00:40:56 2012 UTC (11 years, 9 months ago) by jmc
Branch: MAIN
CVS Tags: HEAD, checkpoint63s, checkpoint64, checkpoint64a, checkpoint64b, checkpoint64c, checkpoint64d, checkpoint64e, checkpoint64f, checkpoint64g, checkpoint64h, checkpoint64i, checkpoint64j, checkpoint64k, checkpoint64l, checkpoint64m, checkpoint64n, checkpoint64o, checkpoint64p, checkpoint64q, checkpoint64r, checkpoint64s, checkpoint64t, checkpoint64u, checkpoint64v, checkpoint64w, checkpoint64x, checkpoint64y, checkpoint64z, checkpoint65, checkpoint65a, checkpoint65b, checkpoint65c, checkpoint65d, checkpoint65e, checkpoint65f, checkpoint65g, checkpoint65h, checkpoint65i, checkpoint65j, checkpoint65k, checkpoint65l, checkpoint65m, checkpoint65n, checkpoint65o, checkpoint65p, checkpoint65q, checkpoint65r, checkpoint65s, checkpoint65t, checkpoint65u, checkpoint65v, checkpoint65w, checkpoint65x, checkpoint65y, checkpoint65z, checkpoint66a, checkpoint66b, checkpoint66c, checkpoint66d, checkpoint66e, checkpoint66f, checkpoint66g, checkpoint66h, checkpoint66i, checkpoint66j, checkpoint66k, checkpoint66l, checkpoint66m, checkpoint66n, checkpoint66o
Changes since 1.16: +11 -2 lines
Diff to previous 1.16 , to selected 1.13 
move full initialisation of freefe array from dic_biotic_forcing.F to fe_chem.F:
 - more logical (output arg. array of S/R FE_CHEM is defined everywhere)
 - prevents TAF to drop the initialisation in TLM code
Revision 1.16 - (view) (download) (annotate) - [select for diffs]
Tue Apr 13 03:06:14 2010 UTC (14 years, 1 month ago) by jmc
Branch: MAIN
CVS Tags: checkpoint62e, checkpoint62f, checkpoint62g, checkpoint62h, checkpoint62i, checkpoint62j, checkpoint62k, checkpoint62l, checkpoint62m, checkpoint62n, checkpoint62o, checkpoint62p, checkpoint62q, checkpoint62r, checkpoint62s, checkpoint62t, checkpoint62u, checkpoint62v, checkpoint62w, checkpoint62x, checkpoint62y, checkpoint62z, checkpoint63, checkpoint63a, checkpoint63b, checkpoint63c, checkpoint63d, checkpoint63e, checkpoint63f, checkpoint63g, checkpoint63h, checkpoint63i, checkpoint63j, checkpoint63k, checkpoint63l, checkpoint63m, checkpoint63n, checkpoint63o, checkpoint63p, checkpoint63q, checkpoint63r
Changes since 1.15: +59 -57 lines
Diff to previous 1.15 , to selected 1.13 
fix for multi-tile (nSx*nSy > 1) set-up.
Revision 1.15 - (view) (download) (annotate) - [select for diffs]
Mon Jun 23 22:26:32 2008 UTC (15 years, 11 months ago) by stephd
Branch: MAIN
CVS Tags: checkpoint61, checkpoint61a, checkpoint61b, checkpoint61c, checkpoint61d, checkpoint61e, checkpoint61f, checkpoint61g, checkpoint61h, checkpoint61i, checkpoint61j, checkpoint61k, checkpoint61l, checkpoint61m, checkpoint61n, checkpoint61o, checkpoint61p, checkpoint61q, checkpoint61r, checkpoint61s, checkpoint61t, checkpoint61u, checkpoint61v, checkpoint61w, checkpoint61x, checkpoint61y, checkpoint61z, checkpoint62, checkpoint62a, checkpoint62b, checkpoint62c, checkpoint62d
Changes since 1.14: +2 -2 lines
Diff to previous 1.14 , to selected 1.13 
o correct bug - which was losing iron!
Revision 1.14 - (view) (download) (annotate) - [select for diffs]
Fri Apr 18 19:32:12 2008 UTC (16 years, 1 month ago) by stephd
Branch: MAIN
CVS Tags: checkpoint59q, checkpoint59r, checkpoint60
Changes since 1.13: +2 -2 lines
Diff to previous 1.13 
o correct _d 0 syntax
Revision 1.13 - (view) (download) (annotate) - [selected]
Mon Apr 7 20:31:16 2008 UTC (16 years, 1 month ago) by dfer
Branch: MAIN
CVS Tags: checkpoint59p
Changes since 1.12: +1 -2 lines
Diff to previous 1.12 
Moving dic options to DIC_OPTIONS.h
Revision 1.12 - (view) (download) (annotate) - [select for diffs]
Fri Apr 4 21:37:06 2008 UTC (16 years, 1 month ago) by dfer
Branch: MAIN
Changes since 1.11: +2 -2 lines
Diff to previous 1.11 , to selected 1.13 
Merging DIC_ABIOTIC.h and DIC_BIOTIC.h
Revision 1.11 - (view) (download) (annotate) - [select for diffs]
Thu Dec 6 22:24:34 2007 UTC (16 years, 5 months ago) by stephd
Branch: MAIN
CVS Tags: checkpoint59l, checkpoint59m, checkpoint59n, checkpoint59o
Changes since 1.10: +15 -5 lines
Diff to previous 1.10 , to selected 1.13 
o don't allow negative biological activity (even if the nutrients have
  become negative). Need new GCHEM_OPTIONS.h macro: #define DIC_NO_NEG.
Revision 1.10 - (view) (download) (annotate) - [select for diffs]
Fri Oct 26 21:08:13 2007 UTC (16 years, 7 months ago) by dfer
Branch: MAIN
CVS Tags: checkpoint59j, checkpoint59k
Changes since 1.9: +11 -10 lines
Diff to previous 1.9 , to selected 1.13 
Add tons of "_d 0" (which changes the outputs)
Revision 1.9 - (view) (download) (annotate) - [select for diffs]
Tue Nov 28 21:16:03 2006 UTC (17 years, 6 months ago) by stephd
Branch: MAIN
CVS Tags: checkpoint58s_post, checkpoint58t_post, checkpoint58u_post, checkpoint58v_post, checkpoint58w_post, checkpoint58x_post, checkpoint58y_post, checkpoint59, checkpoint59a, checkpoint59b, checkpoint59c, checkpoint59d, checkpoint59e, checkpoint59f, checkpoint59g, checkpoint59h, checkpoint59i
Changes since 1.8: +14 -3 lines
Diff to previous 1.8 , to selected 1.13 
o changes to make dic code more adjoint friendly:
      - standardize how tracers are passed from dic_biotic_forcing to
        other subroutines
      - add a tanh function to take the place of min(x,y) in bio_export.F
        and fe_chem.F.
Revision 1.8 - (view) (download) (annotate) - [select for diffs]
Fri Dec 16 21:07:53 2005 UTC (18 years, 5 months ago) by stephd
Branch: MAIN
CVS Tags: checkpoint57z_post, checkpoint58, checkpoint58a_post, checkpoint58b_post, checkpoint58c_post, checkpoint58d_post, checkpoint58e_post, checkpoint58f_post, checkpoint58g_post, checkpoint58h_post, checkpoint58i_post, checkpoint58j_post, checkpoint58k_post, checkpoint58l_post, checkpoint58m_post, checkpoint58n_post, checkpoint58o_post, checkpoint58p_post, checkpoint58q_post, checkpoint58r_post
Changes since 1.7: +3 -3 lines
Diff to previous 1.7 , to selected 1.13 
o dic code now does no calculations on the overlap regions
Revision 1.7 - (view) (download) (annotate) - [select for diffs]
Mon Dec 12 19:07:36 2005 UTC (18 years, 5 months ago) by stephd
Branch: MAIN
Changes since 1.6: +3 -3 lines
Diff to previous 1.6 , to selected 1.13 
o carbon coefficients were calculated in overlap regions -- now corrected
Revision 1.6 - (view) (download) (annotate) - [select for diffs]
Thu Oct 13 16:25:12 2005 UTC (18 years, 7 months ago) by stephd
Branch: MAIN
CVS Tags: checkpoint57v_post, checkpoint57w_post, checkpoint57x_post, checkpoint57y_post, checkpoint57y_pre
Changes since 1.5: +5 -1 lines
Diff to previous 1.5 , to selected 1.13 
o add additional switches MINFE - to limit amount of free iron
                          READ_PAR - reads PAR from file, rather
                             than using insol.F
Revision 1.5 - (view) (download) (annotate) - [select for diffs]
Mon Oct 18 16:01:13 2004 UTC (19 years, 7 months ago) by jmc
Branch: MAIN
CVS Tags: checkpint57u_post, checkpoint55h_post, checkpoint55i_post, checkpoint55j_post, checkpoint56, checkpoint56a_post, checkpoint56b_post, checkpoint56c_post, checkpoint57, checkpoint57a_post, checkpoint57a_pre, checkpoint57b_post, checkpoint57c_post, checkpoint57c_pre, checkpoint57d_post, checkpoint57e_post, checkpoint57f_post, checkpoint57f_pre, checkpoint57g_post, checkpoint57g_pre, checkpoint57h_done, checkpoint57h_post, checkpoint57h_pre, checkpoint57i_post, checkpoint57j_post, checkpoint57k_post, checkpoint57l_post, checkpoint57m_post, checkpoint57n_post, checkpoint57o_post, checkpoint57p_post, checkpoint57q_post, checkpoint57r_post, checkpoint57s_post, checkpoint57t_post, eckpoint57e_pre
Changes since 1.4: +3 -3 lines
Diff to previous 1.4 , to selected 1.13 
ifort does not want to compile empty file
Revision 1.4 - (view) (download) (annotate) - [select for diffs]
Tue Jul 13 18:03:31 2004 UTC (19 years, 10 months ago) by jmc
Branch: MAIN
CVS Tags: checkpoint54c_post, checkpoint54d_post, checkpoint54e_post, checkpoint54f_post, checkpoint55, checkpoint55a_post, checkpoint55b_post, checkpoint55c_post, checkpoint55d_post, checkpoint55d_pre, checkpoint55e_post, checkpoint55f_post, checkpoint55g_post
Changes since 1.3: +4 -0 lines
Diff to previous 1.3 , to selected 1.13 
max number of passive tracers is now defined in PTRACERS_SIZE.h
Revision 1.3 - (view) (download) (annotate) - [select for diffs]
Thu Oct 9 04:19:19 2003 UTC (20 years, 7 months ago) by edhill
Branch: MAIN
CVS Tags: branch-netcdf, checkpoint51i_post, checkpoint51k_post, checkpoint51l_post, checkpoint51l_pre, checkpoint51m_post, checkpoint51n_post, checkpoint51n_pre, checkpoint51o_post, checkpoint51o_pre, checkpoint51p_post, checkpoint51q_post, checkpoint51r_post, checkpoint51s_post, checkpoint51t_post, checkpoint51u_post, checkpoint52, checkpoint52a_post, checkpoint52a_pre, checkpoint52b_post, checkpoint52b_pre, checkpoint52c_post, checkpoint52d_post, checkpoint52d_pre, checkpoint52e_post, checkpoint52e_pre, checkpoint52f_post, checkpoint52f_pre, checkpoint52h_pre, checkpoint52i_post, checkpoint52i_pre, checkpoint52j_post, checkpoint52j_pre, checkpoint52k_post, checkpoint52l_post, checkpoint52l_pre, checkpoint52m_post, checkpoint52n_post, checkpoint53, checkpoint53a_post, checkpoint53b_post, checkpoint53b_pre, checkpoint53c_post, checkpoint53d_post, checkpoint53d_pre, checkpoint53f_post, checkpoint53g_post, checkpoint54, checkpoint54a_post, checkpoint54a_pre, checkpoint54b_post, ecco_c52_e35, hrcube4, hrcube5, hrcube_1, hrcube_2, hrcube_3
Branch point for: branch-nonh, checkpoint51n_branch, netcdf-sm0, tg2-branch
Changes since 1.2: +1 -1 lines
Diff to previous 1.2 , to selected 1.13 
 o first check-in for the "branch-genmake2" merge
 o verification suite as run on shelley (gcc 3.2.2):

Wed Oct  8 23:42:29 EDT 2003
                T           S           U           V
G D M    c        m  s        m  s        m  s        m  s
E p a R  g  m  m  e  .  m  m  e  .  m  m  e  .  m  m  e  .
N n k u  2  i  a  a  d  i  a  a  d  i  a  a  d  i  a  a  d
2 d e n  d  n  x  n  .  n  x  n  .  n  x  n  .  n  x  n  .

OPTFILE=NONE

Y Y Y Y 13 16 16 16  0 16 16 16 16 16 16 16 16 13 12  0  0 pass  adjustment.128x64x1
Y Y Y Y 16 16 16 16  0 16 16 16 16 16 16  0  0 16 16  0  0 pass  adjustment.cs-32x32x1
Y Y Y Y 16 16 16 16  0 16 16 16 16 16 16 22  0 16 16 22  0 pass  adjust_nlfs.cs-32x32x1
Y Y Y Y -- 13 13 16 16 13 13 13 13 16 16 16 16 16 16 16 16 N/O   advect_cs
Y Y Y Y -- 22 16 16 16 16 16 16 13 16 16 16 16 16 16 16 16 N/O   advect_xy
Y Y Y Y -- 13 16 13 16 16 16 16 16 16 16 22 16 16 16 16 16 N/O   advect_xz
Y Y Y Y 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 pass  aim.5l_cs
Y Y Y Y 14 16 16 16 16 16 16 16 16 13 16 16 16 16 16 13 16 pass  aim.5l_Equatorial_Channel
Y Y Y Y 16 16 16 16 16 16 16 16 16 16 16 13 16 16 13 13 16 pass  aim.5l_LatLon
Y Y Y Y 13 16 16 16 16 16 16 16 16 16 13 12 13 13 16 13 16 pass  exp0
Y Y Y Y 14 16 16 16 16 16 16 16 22 16 16 16 13 16 16 22 16 pass  exp1
Y Y Y Y 13 13 16 13 16 16 16 16 16 13 13 16 16 13 13 13 13 pass  exp2
Y Y Y Y 16 16 16 16 16 16 16 16 22 16 16 16 16 16 16 16 16 pass  exp4
Y Y Y Y 16 16 16 16 16 16 16 16 16 16 16 22 16 16 16 22 16 pass  exp5
Y Y Y Y 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 pass  front_relax
Y Y Y Y 14 16 16 13 13 16 16 13 13 16 13 13 16 12 13 13 16 pass  global_ocean.90x40x15
Y Y Y Y 10 16 16 13 13 16 13 16 16 13 13 13 13 16 16 13 16 FAIL  global_ocean.cs32x15
Y Y Y Y  6 11 12 13 13 12 13 16 13  9  9  9  9 10  9  9 11 FAIL  global_ocean_pressure
Y Y Y Y 14 16 16 13 16 16 16 13 13 13 13 13 16 12 16 13 16 pass  global_with_exf
Y Y Y Y 14 16 16 16 16 16 16 16 16 11 13 22 13 16 16  9 16 pass  hs94.128x64x5
Y Y Y Y 13 16 16 16 16 16 16 16 16 11 16 16 16 13 16 22 13 pass  hs94.1x64x5
Y Y Y Y 14 16 16 16 16 16 16 16 16 13 16 13 13 16 16 22 13 pass  hs94.cs-32x32x5
Y Y Y Y 10 10 16 13 13 16 16 16 22 16 13 13 13 13 13 22 13 FAIL  ideal_2D_oce
Y Y Y Y  8 16 16 16 16 16 16 16 16 13 13  8 16 16 16 16 16 FAIL  internal_wave
Y Y Y Y 14 16 16 16 16 16 16 16 16 13 13 22 13 13 13 22 16 pass  inverted_barometer
Y Y Y Y 12 16 16 16 16 16 16 16 16 16 13 12 13 13 13 13 13 FAIL  lab_sea
Y Y Y Y 11 16 16 16 16 16 16 16 13 13 13 12 13 16 13 12 13 FAIL  natl_box
Y Y Y Y 16 16 16 16 16 16 16 16 22 16 16 16 16 16 16 16 16 pass  plume_on_slope
Y Y Y Y 13 16 16 16 16 13 16 16 16 16 16 16 16 13 16 16 16 pass  solid-body.cs-32x32x1
Revision 1.2 - (view) (download) (annotate) - [select for diffs]
Mon Oct 6 20:11:10 2003 UTC (20 years, 7 months ago) by stephd
Branch: MAIN
CVS Tags: checkpoint51h_pre, checkpoint51i_pre, checkpoint51j_post
Changes since 1.1: +2 -1 lines
Diff to previous 1.1 , to selected 1.13 
changes to keep current with gchem pkg, and to be adjointable
Revision 1.1 - (view) (download) (annotate) - [select for diffs]
Wed Jun 25 21:00:36 2003 UTC (20 years, 11 months ago) by stephd
Branch: MAIN
CVS Tags: branchpoint-genmake2, checkpoint51a_post, checkpoint51b_post, checkpoint51b_pre, checkpoint51c_post, checkpoint51d_post, checkpoint51e_post, checkpoint51f_post, checkpoint51f_pre, checkpoint51g_post
Branch point for: branch-genmake2
Diff to selected 1.13 
initial checking in biogeochemistry packages

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