/[MITgcm]/MITgcm/pkg/dic/dic_biotic_param.F
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Annotation of /MITgcm/pkg/dic/dic_biotic_param.F

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Revision 1.2 - (hide annotations) (download)
Thu Oct 9 04:19:19 2003 UTC (20 years, 8 months ago) by edhill
Branch: MAIN
CVS Tags: checkpoint51k_post, checkpoint51l_post, checkpoint52e_pre, checkpoint51o_pre, checkpoint52e_post, checkpoint51n_pre, checkpoint52d_pre, checkpoint51q_post, branch-netcdf, checkpoint51r_post, checkpoint52b_pre, checkpoint51i_post, checkpoint51l_pre, checkpoint51o_post, checkpoint52, checkpoint52d_post, checkpoint52a_post, checkpoint52f_post, checkpoint52c_post, ecco_c52_e35, checkpoint52a_pre, checkpoint52b_post, checkpoint51m_post, checkpoint51t_post, checkpoint52i_post, checkpoint51p_post, checkpoint51n_post, checkpoint52i_pre, checkpoint51u_post, checkpoint52h_pre, checkpoint52f_pre, hrcube_1, hrcube_2, hrcube_3, checkpoint51s_post
Branch point for: branch-nonh, netcdf-sm0, tg2-branch, checkpoint51n_branch
Changes since 1.1: +1 -1 lines 
 o first check-in for the "branch-genmake2" merge
 o verification suite as run on shelley (gcc 3.2.2):

Wed Oct  8 23:42:29 EDT 2003
                T           S           U           V
G D M    c        m  s        m  s        m  s        m  s
E p a R  g  m  m  e  .  m  m  e  .  m  m  e  .  m  m  e  .
N n k u  2  i  a  a  d  i  a  a  d  i  a  a  d  i  a  a  d
2 d e n  d  n  x  n  .  n  x  n  .  n  x  n  .  n  x  n  .

OPTFILE=NONE

Y Y Y Y 13 16 16 16  0 16 16 16 16 16 16 16 16 13 12  0  0 pass  adjustment.128x64x1
Y Y Y Y 16 16 16 16  0 16 16 16 16 16 16  0  0 16 16  0  0 pass  adjustment.cs-32x32x1
Y Y Y Y 16 16 16 16  0 16 16 16 16 16 16 22  0 16 16 22  0 pass  adjust_nlfs.cs-32x32x1
Y Y Y Y -- 13 13 16 16 13 13 13 13 16 16 16 16 16 16 16 16 N/O   advect_cs
Y Y Y Y -- 22 16 16 16 16 16 16 13 16 16 16 16 16 16 16 16 N/O   advect_xy
Y Y Y Y -- 13 16 13 16 16 16 16 16 16 16 22 16 16 16 16 16 N/O   advect_xz
Y Y Y Y 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 pass  aim.5l_cs
Y Y Y Y 14 16 16 16 16 16 16 16 16 13 16 16 16 16 16 13 16 pass  aim.5l_Equatorial_Channel
Y Y Y Y 16 16 16 16 16 16 16 16 16 16 16 13 16 16 13 13 16 pass  aim.5l_LatLon
Y Y Y Y 13 16 16 16 16 16 16 16 16 16 13 12 13 13 16 13 16 pass  exp0
Y Y Y Y 14 16 16 16 16 16 16 16 22 16 16 16 13 16 16 22 16 pass  exp1
Y Y Y Y 13 13 16 13 16 16 16 16 16 13 13 16 16 13 13 13 13 pass  exp2
Y Y Y Y 16 16 16 16 16 16 16 16 22 16 16 16 16 16 16 16 16 pass  exp4
Y Y Y Y 16 16 16 16 16 16 16 16 16 16 16 22 16 16 16 22 16 pass  exp5
Y Y Y Y 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 16 pass  front_relax
Y Y Y Y 14 16 16 13 13 16 16 13 13 16 13 13 16 12 13 13 16 pass  global_ocean.90x40x15
Y Y Y Y 10 16 16 13 13 16 13 16 16 13 13 13 13 16 16 13 16 FAIL  global_ocean.cs32x15
Y Y Y Y  6 11 12 13 13 12 13 16 13  9  9  9  9 10  9  9 11 FAIL  global_ocean_pressure
Y Y Y Y 14 16 16 13 16 16 16 13 13 13 13 13 16 12 16 13 16 pass  global_with_exf
Y Y Y Y 14 16 16 16 16 16 16 16 16 11 13 22 13 16 16  9 16 pass  hs94.128x64x5
Y Y Y Y 13 16 16 16 16 16 16 16 16 11 16 16 16 13 16 22 13 pass  hs94.1x64x5
Y Y Y Y 14 16 16 16 16 16 16 16 16 13 16 13 13 16 16 22 13 pass  hs94.cs-32x32x5
Y Y Y Y 10 10 16 13 13 16 16 16 22 16 13 13 13 13 13 22 13 FAIL  ideal_2D_oce
Y Y Y Y  8 16 16 16 16 16 16 16 16 13 13  8 16 16 16 16 16 FAIL  internal_wave
Y Y Y Y 14 16 16 16 16 16 16 16 16 13 13 22 13 13 13 22 16 pass  inverted_barometer
Y Y Y Y 12 16 16 16 16 16 16 16 16 16 13 12 13 13 13 13 13 FAIL  lab_sea
Y Y Y Y 11 16 16 16 16 16 16 16 13 13 13 12 13 16 13 12 13 FAIL  natl_box
Y Y Y Y 16 16 16 16 16 16 16 16 22 16 16 16 16 16 16 16 16 pass  plume_on_slope
Y Y Y Y 13 16 16 16 16 13 16 16 16 16 16 16 16 13 16 16 16 pass  solid-body.cs-32x32x1
1 stephd 1.1
2 edhill 1.2 #include "DIC_OPTIONS.h"
3 stephd 1.1 #include "GCHEM_OPTIONS.h"
4    
5     CStartOfInterface
6     SUBROUTINE DIC_BIOTIC_PARAM( myThid )
7     C /==========================================================\
8     C | SUBROUTINE DIC_BIOTIC_PARAM |
9     C | o Set parameters needed for |
10     C | o Abiotic Carbon (DIC) and biotic |
11     C |==========================================================|
12     C \==========================================================/
13     IMPLICIT NONE
14    
15     C === Global variables ===
16     #include "SIZE.h"
17     #include "EEPARAMS.h"
18     #include "PARAMS.h"
19     #include "GRID.h"
20     #include "DYNVARS.h"
21     #ifdef DIC_BIOTIC
22     #include "DIC_BIOTIC.h"
23     #endif
24    
25     C == Routine arguments ==
26     C myThid - Number of this instance of INI_TR1
27     INTEGER myThid
28     CEndOfInterface
29    
30     C == Local variables ==
31     INTEGER i,j,k,bi,bj
32    
33     #ifdef DIC_BIOTIC
34    
35    
36     C fraction of new production going to DOP
37     DOPfraction = 0.67
38     C DOP remineralization rate (s)
39     KDOPRemin = 1.0/(0.5*360.*86400.)
40     C remin power law coeff
41     Kremin = 0.9
42     C critical depth (m)
43     zcrit = 50.0
44     nlev=10
45     ccritical oxygen level (mol m-3)
46     O2crit = 4.0d-3
47     C set stoichiometric ratios
48     R_op = -170.0
49     R_cp = 117.0
50     R_np = 16.0
51     R_fep= 0.000468
52     C set scale depth for CaCO3 remineralization (m)
53     zca = 3500.0
54     cn parameters for light/nutrient limited bioac
55     k0=0.02 !light attentuation coefficient
56     lit0=30 ! half saturation light constant (W/m2)
57     Kpo4 = 5.d-4 ! half saturation phosphate constant (mol/m3)
58     Kfe = 0.00000012 ! half saturation fe constant (mol/m3)
59     Kfe = 1.2e-7 ! half saturation fe constant (mol/m3)
60     c iron chemisty values
61     alpfe = 0.01 ! solubility of aeolian fe
62     c KScav = 0.19/(360.*86400.) ! scavenging rate QQ
63     c ligand_stab= 1.d8 ! ligand-fre iron stability constant (m3/mol)
64     c ligand_tot = 0.000001 ! total free ligand (mol/m3)
65     c
66     c
67     c control variables
68     KScav = 0.19/(360.*86400.) ! iron scavenging rate QQ
69     ligand_stab= 1.d8 ! ligand-free iron stability constant (m3/mol)
70     ligand_tot = 0.000001 ! total free ligand (mol/m3)
71     DO bj = myByLo(myThid), myByHi(myThid)
72     DO bi = myBxLo(myThid), myBxHi(myThid)
73     DO j=1-Oly,sNy+Oly
74     DO i=1-Olx,sNx+Olx
75     C timescape for biological activity
76     alpha(i,j,bi,bj)= 2d-3/(24*60*60*360)
77     C set inorganic/organic carbon rain ratio
78     rain_ratio(i,j,bi,bj)=0.07
79     ENDDO
80     ENDDO
81     ENDDO
82     ENDDO
83    
84     #endif
85    
86     RETURN
87     END
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