/[MITgcm]/MITgcm/pkg/dic/bio_export.F
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Contents of /MITgcm/pkg/dic/bio_export.F

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Revision 1.20 - (show annotations) (download)
Wed Dec 5 16:52:32 2007 UTC (16 years, 6 months ago) by dfer
Branch: MAIN
Changes since 1.19: +6 -10 lines
Cosmetic changes

1 C $Header: /u/gcmpack/MITgcm/pkg/dic/bio_export.F,v 1.19 2007/12/03 20:49:55 stephd Exp $
2 C $Name: $
3
4 #include "DIC_OPTIONS.h"
5 #include "GCHEM_OPTIONS.h"
6
7 CBOP
8 C !ROUTINE: BIO_EXPORT
9
10 C !INTERFACE: ==========================================================
11 SUBROUTINE BIO_EXPORT( PTR_PO4 ,
12 #ifdef ALLOW_FE
13 I PTR_FE,
14 #endif
15 I bioac,
16 I bi,bj,imin,imax,jmin,jmax,
17 I myIter,myTime,myThid)
18
19 c !DESCRIPTION:
20 C Calculate biological activity and export
21
22 C !USES: ===============================================================
23 IMPLICIT NONE
24 #include "SIZE.h"
25 #include "DYNVARS.h"
26 #include "EEPARAMS.h"
27 #include "PARAMS.h"
28 #include "GRID.h"
29 #include "DIC_ABIOTIC.h"
30 #include "DIC_BIOTIC.h"
31 #ifdef USE_QSW
32 #include "FFIELDS.h"
33 #endif
34
35 C !INPUT PARAMETERS: ===================================================
36 C myThid :: thread number
37 C myIter :: current timestep
38 C myTime :: current time
39 C PTR_PO4 :: phosphate tracer field
40 C PTR_FE :: iron tracer field
41 INTEGER myIter
42 _RL myTime
43 INTEGER myThid
44 _RL PTR_PO4(1-OLx:sNx+OLx,1-OLy:sNy+OLy,Nr)
45 #ifdef ALLOW_FE
46 _RL PTR_FE(1-OLx:sNx+OLx,1-OLy:sNy+OLy,Nr)
47 #endif
48 INTEGER imin, imax, jmin, jmax, bi, bj
49
50
51 C !OUTPUT PARAMETERS: ==================================================
52 C bioac :: biological productivity (will be split
53 C between export and dissolved pool)
54 _RL bioac(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR)
55
56 #ifdef ALLOW_PTRACERS
57 #ifdef DIC_BIOTIC
58
59 C !LOCAL VARIABLES: ====================================================
60 C i,j,k :: loop indices
61 INTEGER I,J,k
62 _RL sfac(1-OLy:sNy+OLy)
63 _RL lit, atten
64 _RL nutlimit
65 #ifdef AD_SAFE
66 _RL thx, thy, theps
67 #endif
68 CEOP
69
70
71 #ifndef READ_PAR
72 #ifndef USE_QSW
73 call insol(myTime,sfac,bj)
74 #endif
75 #endif
76 DO j=jmin,jmax
77 DO i=imin,imax
78 C Fortran-90
79 CRG C$TAF INIT bio_export = static, nlev
80 C FORTRAN-77 dynamic memory uses adstore adresto
81 CRG C$TAF INIT bio_export = memory
82 C FORTRAN-77 with know max of nlev
83 C$TAF INIT bio_export = static, 10
84 #ifdef READ_PAR
85 lit=PAR(i,j,bi,bj)
86 #elif (defined USE_QSW)
87 lit=-parfrac*Qsw(i,j,bi,bj)*maskC(i,j,1,bi,bj)
88 #else
89 lit=sfac(j)
90 #endif
91
92 IF ( .NOT. QSW_underice ) THEN
93 c if using Qsw but not seaice/thsice or coupled, then
94 c ice fraction needs to be taken into account
95 lit=lit*(1. _d 0 - FIce(i,j,bi,bj))
96 ENDIF
97 c
98 DO k=1,nlev
99 C$TAF STORE lit = bio_export
100 atten=(k0*drF(k)*hFacC(i,j,k,bi,bj)*.5 _d 0)
101 if (k.gt.1) atten=atten+(k0*drF(k-1)
102 & *hFacC(i,j,k-1,bi,bj)*.5 _d 0)
103 lit=lit*exp(-atten)
104 IF (lit.LT.0. _d 0.OR.lit.GT.350. _d 0) THEN
105 print*,'QQ lit', lit
106 ENDIF
107
108 #ifdef ALLOW_FE
109 #ifdef AD_SAFE
110 thx = PTR_PO4(i,j,k)/(PTR_PO4(i,j,k)+KPO4)
111 thy = PTR_FE(i,j,k)/(PTR_FE(i,j,k)+KFE)
112 theps = 1. _d -6
113 nutlimit= ( 1. _d 0 - tanh((thx-thy)/theps) ) * thx/2. _d 0
114 & +( 1. _d 0 + tanh((thx-thy)/theps) ) * thy/2. _d 0
115 #else
116 nutlimit= min(PTR_PO4(i,j,k)/(PTR_PO4(i,j,k)+KPO4),
117 & PTR_FE(i,j,k)/(PTR_FE(i,j,k)+KFE) )
118 #endif
119 #else
120 nutlimit= PTR_PO4(i,j,k)/(PTR_PO4(i,j,k)+KPO4)
121 #endif
122
123 bioac(i,j,k)=alpha(i,j,bi,bj)*
124 & lit/(lit+lit0)*maskC(i,j,k,bi,bj)*
125 & nutlimit
126 ENDDO
127 ENDDO
128 ENDDO
129 c
130 #endif
131 #endif
132 RETURN
133 END

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