/[MITgcm]/MITgcm/pkg/diagnostics/diagnostics_out.F
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revision 1.39 by mlosch, Tue May 27 08:37:19 2008 UTC revision 1.49 by jmc, Mon Jun 6 15:42:58 2011 UTC
# Line 8  CBOP 0 Line 8  CBOP 0
8  C     !ROUTINE: DIAGNOSTICS_OUT  C     !ROUTINE: DIAGNOSTICS_OUT
9    
10  C     !INTERFACE:  C     !INTERFACE:
11        SUBROUTINE  DIAGNOSTICS_OUT(        SUBROUTINE DIAGNOSTICS_OUT(
12       I     listId,       I     listId,
13       I     myIter,       I     myIter,
14       I     myTime,       I     myTime,
# Line 38  C     myThid  :: my Thread Id number Line 38  C     myThid  :: my Thread Id number
38        INTEGER listId, myIter, myThid        INTEGER listId, myIter, myThid
39  CEOP  CEOP
40    
41    C     !FUNCTIONS:
42          INTEGER ILNBLNK
43          EXTERNAL ILNBLNK
44    #ifdef ALLOW_FIZHI
45          _RL   getcon
46          EXTERNAL getcon
47    #endif
48    
49  C     !LOCAL VARIABLES:  C     !LOCAL VARIABLES:
50  C     i,j,k :: loop indices  C     i,j,k :: loop indices
51    C     bi,bj :: tile indices
52  C     lm    :: loop index (averageCycle)  C     lm    :: loop index (averageCycle)
53  C     md    :: field number in the list "listId".  C     md    :: field number in the list "listId".
54  C     ndId  :: diagnostics  Id number (in available diagnostics list)  C     ndId  :: diagnostics  Id number (in available diagnostics list)
55  C     mate  :: counter mate Id number (in available diagnostics list)  C     mate  :: counter mate Id number (in available diagnostics list)
56  C     ip    :: diagnostics  pointer to storage array  C     ip    :: diagnostics  pointer to storage array
57  C     im    :: counter-mate pointer to storage array  C     im    :: counter-mate pointer to storage array
58    C     nLevOutp :: number of levels to write in output file
59  C  C
60  C--   COMMON /LOCAL_DIAGNOSTICS_OUT/ local common block (for multi-threaded)  C--   COMMON /LOCAL_DIAGNOSTICS_OUT/ local common block (for multi-threaded)
61  C     qtmp1 :: thread-shared temporary array (needs to be in common block):  C     qtmp1 :: thread-shared temporary array (needs to be in common block):
# Line 54  C              diagnostic storage qdiag Line 64  C              diagnostic storage qdiag
64        COMMON /LOCAL_DIAGNOSTICS_OUT/ qtmp1        COMMON /LOCAL_DIAGNOSTICS_OUT/ qtmp1
65        _RL qtmp1(1-OLx:sNx+OLx,1-OLy:sNy+OLy,NrMax,nSx,nSy)        _RL qtmp1(1-OLx:sNx+OLx,1-OLy:sNy+OLy,NrMax,nSx,nSy)
66    
67        INTEGER i, j, k, lm, klev        INTEGER i, j, k, lm
68        INTEGER bi, bj        INTEGER bi, bj
69        INTEGER md, ndId, ip, im        INTEGER md, ndId, ip, im
70        INTEGER mate, mVec        INTEGER mate, mVec
71        CHARACTER*10 gcode        CHARACTER*10 gcode
72        _RL undef, getcon        _RL undef
73        _RL tmpLev        _RL tmpLev
       EXTERNAL getcon  
       INTEGER ILNBLNK  
       EXTERNAL ILNBLNK  
74        INTEGER ilen        INTEGER ilen
75          INTEGER nLevOutp
76    
77        INTEGER ioUnit        INTEGER ioUnit
78        CHARACTER*(MAX_LEN_FNAM) fn        CHARACTER*(MAX_LEN_FNAM) fn
79        CHARACTER*(MAX_LEN_MBUF) suff        CHARACTER*(MAX_LEN_MBUF) suff
80        CHARACTER*(MAX_LEN_MBUF) msgBuf        CHARACTER*(MAX_LEN_MBUF) msgBuf
81        INTEGER prec, nRec        INTEGER prec, nRec, nTimRec
82          _RL     timeRec(2)
83  #ifdef ALLOW_MDSIO  #ifdef ALLOW_MDSIO
84        LOGICAL glf        LOGICAL glf
85  #endif  #endif
86  #ifdef ALLOW_MNC  #ifdef ALLOW_MNC
87        INTEGER ii        INTEGER ll, llMx, jj, jjMx
88          INTEGER ii, klev
89        CHARACTER*(MAX_LEN_FNAM) diag_mnc_bn        CHARACTER*(MAX_LEN_FNAM) diag_mnc_bn
90        INTEGER CW_DIMS, NLEN        INTEGER CW_DIMS, NLEN
91        PARAMETER ( CW_DIMS = 10 )        PARAMETER ( CW_DIMS = 10 )
# Line 97  C              diagnostic storage qdiag Line 107  C              diagnostic storage qdiag
107    
108  C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----|  C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----|
109    
110    C---  set file properties
111        ioUnit= standardMessageUnit        ioUnit= standardMessageUnit
112          undef = UNSET_RL
113    #ifdef ALLOW_FIZHI
114    c     IF ( useFIZHI ) undef = getcon('UNDEF')
115        undef = getcon('UNDEF')        undef = getcon('UNDEF')
116    #endif
117        WRITE(suff,'(I10.10)') myIter        WRITE(suff,'(I10.10)') myIter
118        ilen = ILNBLNK(fnames(listId))        ilen = ILNBLNK(fnames(listId))
119        WRITE( fn, '(A,A,A)' ) fnames(listId)(1:ilen),'.',suff(1:10)        WRITE( fn, '(A,A,A)' ) fnames(listId)(1:ilen),'.',suff(1:10)
120    C-    for now, if integrate vertically, output field has just 1 level:
121          nLevOutp = nlevels(listId)
122          IF ( fflags(listId)(2:2).EQ.'I' ) nLevOutp = 1
123    
124    C--   Set time information:
125          IF ( freq(listId).LT.0. ) THEN
126    C-    Snap-shot: store a unique time (which is consistent with State-Var timing)
127            nTimRec = 1
128            timeRec(1) = myTime
129          ELSE
130    C-    Time-average: store the 2 edges of the time-averaging interval.
131    C      this time is consitent with intermediate Var (i.e., non-state, e.g, flux,
132    C      tendencies) timing. For State-Var, this is shifted by + halt time-step.
133            nTimRec = 2
134    
135    C-    end of time-averaging interval:
136            timeRec(2) = myTime
137    
138    C-    begining of time-averaging interval:
139    c       timeRec(1) = myTime - freq(listId)
140    C     a) find the time of the previous multiple of output freq:
141            timeRec(1) = myTime-deltaTClock*0.5 _d 0
142            timeRec(1) = (timeRec(1)-phase(listId))/freq(listId)
143            i = INT( timeRec(1) )
144            IF ( timeRec(1).LT.0. ) THEN
145              tmpLev = FLOAT(i)
146              IF ( timeRec(1).NE.tmpLev ) i = i - 1
147            ENDIF
148            timeRec(1) = phase(listId) + freq(listId)*FLOAT(i)
149    c       if ( listId.eq.2 ) write(0,*) 'f',i,timeRec(1)/deltaTClock
150            timeRec(1) = MAX( timeRec(1), startTime )
151    
152    C     b) round off to nearest multiple of time-step:
153            timeRec(1) = (timeRec(1)-baseTime)/deltaTClock
154            i = NINT( timeRec(1) )
155    C     if just half way, NINT will return the next time-step: correct this
156            tmpLev = FLOAT(i) - 0.5 _d 0
157            IF ( timeRec(1).EQ.tmpLev ) i = i - 1
158            timeRec(1) = baseTime + deltaTClock*FLOAT(i)
159    c       if ( listId.eq.2 ) write(0,*) i,timeRec(1)/deltaTClock
160          ENDIF
161    C--   Convert time to iteration number (debug)
162    c     DO i=1,nTimRec
163    c       timeRec(i) = timeRec(i)/deltaTClock
164    c     ENDDO
165    
166  #ifdef ALLOW_MNC  #ifdef ALLOW_MNC
167    C-- this is a trick to reverse the order of the loops on md (= field)
168    C   and lm (= averagePeriod): binary output: lm loop inside md loop ;
169    C                                 mnc ouput: md loop inside lm loop.
170        IF (useMNC .AND. diag_mnc) THEN        IF (useMNC .AND. diag_mnc) THEN
171            jjMx = averageCycle(listId)
172            llMx = 1
173          ELSE
174            jjMx = 1
175            llMx = averageCycle(listId)
176          ENDIF
177          DO jj=1,jjMx
178    
179           IF (useMNC .AND. diag_mnc) THEN
180  C     Handle missing value attribute (land points)  C     Handle missing value attribute (land points)
181         useMissingValue = .FALSE.           useMissingValue = .FALSE.
182  #ifdef DIAGNOSTICS_MISSING_VALUE  #ifdef DIAGNOSTICS_MISSING_VALUE
183         useMissingValue = .TRUE.           useMissingValue = .TRUE.
184  #endif /* DIAGNOSTICS_MISSING_VALUE */  #endif /* DIAGNOSTICS_MISSING_VALUE */
185         IF ( misvalFlt(listId) .NE. UNSET_RL ) THEN           IF ( misvalFlt(listId) .NE. UNSET_RL ) THEN
186          misvalLoc = misvalFlt(listId)            misvalLoc = misvalFlt(listId)
187         ELSE           ELSE
188          misvalLoc = undef            misvalLoc = undef
189         ENDIF           ENDIF
190  C     Defaults to UNSET_I  C     Defaults to UNSET_I
191         misvalIntLoc = misvalInt(listId)           misvalIntLoc = misvalInt(listId)
192         DO ii=1,2           DO ii=1,2
193  C       misval_r4(ii)  = UNSET_FLOAT4  C         misval_r4(ii)  = UNSET_FLOAT4
194  C       misval_r8(ii)  = UNSET_FLOAT8  C         misval_r8(ii)  = UNSET_FLOAT8
195          misval_r4(ii)  = misvalLoc            misval_r4(ii)  = misvalLoc
196          misval_r8(ii)  = misvalLoc            misval_r8(ii)  = misvalLoc
197          misval_int(ii) = UNSET_I            misval_int(ii) = UNSET_I
198         ENDDO           ENDDO
199          DO i = 1,MAX_LEN_FNAM           DO i = 1,MAX_LEN_FNAM
200            diag_mnc_bn(i:i) = ' '             diag_mnc_bn(i:i) = ' '
201          ENDDO           ENDDO
202          DO i = 1,NLEN           DO i = 1,NLEN
203            dn_blnk(i:i) = ' '             dn_blnk(i:i) = ' '
204          ENDDO           ENDDO
205          WRITE( diag_mnc_bn, '(A)' ) fnames(listId)(1:ilen)           WRITE( diag_mnc_bn, '(A)' ) fnames(listId)(1:ilen)
206    
207  C       Update the record dimension by writing the iteration number  C       Update the record dimension by writing the iteration number
208          CALL MNC_CW_SET_UDIM(diag_mnc_bn, -1, myThid)           klev = myIter + jj - jjMx
209          CALL MNC_CW_RL_W_S('D',diag_mnc_bn,0,0,'T',myTime,myThid)           tmpLev = myTime + deltaTClock*(jj -jjMx)
210          CALL MNC_CW_SET_UDIM(diag_mnc_bn, 0, myThid)           CALL MNC_CW_SET_UDIM(diag_mnc_bn, -1, myThid)
211          CALL MNC_CW_I_W_S('I',diag_mnc_bn,0,0,'iter',myIter,myThid)           CALL MNC_CW_RL_W_S('D',diag_mnc_bn,0,0,'T',tmpLev,myThid)
212             CALL MNC_CW_SET_UDIM(diag_mnc_bn, 0, myThid)
213             CALL MNC_CW_I_W_S('I',diag_mnc_bn,0,0,'iter',klev,myThid)
214    
215  C       NOTE: at some point it would be a good idea to add a time_bounds  C       NOTE: at some point it would be a good idea to add a time_bounds
216  C       variable that has dimension (2,T) and clearly denotes the  C       variable that has dimension (2,T) and clearly denotes the
217  C       beginning and ending times for each diagnostics period  C       beginning and ending times for each diagnostics period
218    
219          dn(1)(1:NLEN) = dn_blnk(1:NLEN)           dn(1)(1:NLEN) = dn_blnk(1:NLEN)
220          WRITE(dn(1),'(a,i6.6)') 'Zmd', nlevels(listId)           WRITE(dn(1),'(a,i6.6)') 'Zmd', nLevOutp
221          dim(1) = nlevels(listId)           dim(1) = nLevOutp
222          ib(1)  = 1           ib(1)  = 1
223          ie(1)  = nlevels(listId)           ie(1)  = nLevOutp
224    
225          CALL MNC_CW_ADD_GNAME('diag_levels', 1,           CALL MNC_CW_ADD_GNAME('diag_levels', 1,
226       &       dim, dn, ib, ie, myThid)       &        dim, dn, ib, ie, myThid)
227          CALL MNC_CW_ADD_VNAME('diag_levels', 'diag_levels',           CALL MNC_CW_ADD_VNAME('diag_levels', 'diag_levels',
228       &       0,0, myThid)       &        0,0, myThid)
229          CALL MNC_CW_ADD_VATTR_TEXT('diag_levels','description',           CALL MNC_CW_ADD_VATTR_TEXT('diag_levels','description',
230       &       'Idicies of vertical levels within the source arrays',       &        'Idicies of vertical levels within the source arrays',
231       &       myThid)       &        myThid)
232  C     suppress the missing value attribute (iflag = 0)  C     suppress the missing value attribute (iflag = 0)
233          IF (useMissingValue)           IF (useMissingValue)
234       &       CALL MNC_CW_VATTR_MISSING('diag_levels', 0,       &       CALL MNC_CW_VATTR_MISSING('diag_levels', 0,
235       I       misval_r8, misval_r4, misval_int,       I       misval_r8, misval_r4, misval_int,
236       I       myThid )       I       myThid )
237    
238          CALL MNC_CW_RL_W('D',diag_mnc_bn,0,0,           CALL MNC_CW_RL_W('D',diag_mnc_bn,0,0,
239       &       'diag_levels', levs(1,listId), myThid)       &        'diag_levels', levs(1,listId), myThid)
240    
241          CALL MNC_CW_DEL_VNAME('diag_levels', myThid)           CALL MNC_CW_DEL_VNAME('diag_levels', myThid)
242          CALL MNC_CW_DEL_GNAME('diag_levels', myThid)           CALL MNC_CW_DEL_GNAME('diag_levels', myThid)
243    
244  #ifdef DIAG_MNC_COORD_NEEDSWORK  #ifdef DIAG_MNC_COORD_NEEDSWORK
245  C       This part has been placed in an #ifdef because, as its currently  C       This part has been placed in an #ifdef because, as its currently
# Line 181  C       as: Z[uml]td000000 where the 't' Line 255  C       as: Z[uml]td000000 where the 't'
255  C       gdiag(10)  C       gdiag(10)
256    
257  C       Now define:  Zmdxxxxxx, Zudxxxxxx, Zldxxxxxx  C       Now define:  Zmdxxxxxx, Zudxxxxxx, Zldxxxxxx
258          ctmp(1:5) = 'mul  '           ctmp(1:5) = 'mul  '
259          DO i = 1,3           DO i = 1,3
260            dn(1)(1:NLEN) = dn_blnk(1:NLEN)             dn(1)(1:NLEN) = dn_blnk(1:NLEN)
261            WRITE(dn(1),'(3a,i6.6)') 'Z',ctmp(i:i),'d',nlevels(listId)             WRITE(dn(1),'(3a,i6.6)') 'Z',ctmp(i:i),'d',nlevels(listId)
262            CALL MNC_CW_ADD_GNAME(dn(1), 1, dim, dn, ib, ie, myThid)             CALL MNC_CW_ADD_GNAME(dn(1), 1, dim, dn, ib, ie, myThid)
263            CALL MNC_CW_ADD_VNAME(dn(1), dn(1), 0,0, myThid)             CALL MNC_CW_ADD_VNAME(dn(1), dn(1), 0,0, myThid)
264    
265  C         The following three ztmp() loops should eventually be modified  C         The following three ztmp() loops should eventually be modified
266  C         to reflect the fractional nature of levs(j,l) -- they should  C         to reflect the fractional nature of levs(j,l) -- they should
# Line 196  C                      + ( rC(INT(FLOOR( Line 270  C                      + ( rC(INT(FLOOR(
270  C                          + rC(INT(CEIL(levs(j,l)))) )  C                          + rC(INT(CEIL(levs(j,l)))) )
271  C                        / ( levs(j,l) - FLOOR(levs(j,l)) )  C                        / ( levs(j,l) - FLOOR(levs(j,l)) )
272  C         for averaged levels.  C         for averaged levels.
273            IF (i .EQ. 1) THEN             IF (i .EQ. 1) THEN
274              DO j = 1,nlevels(listId)               DO j = 1,nlevels(listId)
275                ztmp(j) = rC(NINT(levs(j,listId)))                 ztmp(j) = rC(NINT(levs(j,listId)))
276              ENDDO               ENDDO
277              CALL MNC_CW_ADD_VATTR_TEXT(dn(1),'description',               CALL MNC_CW_ADD_VATTR_TEXT(dn(1),'description',
278       &           'Dimensional coordinate value at the mid point',       &            'Dimensional coordinate value at the mid point',
279       &           myThid)       &            myThid)
280            ELSEIF (i .EQ. 2) THEN             ELSEIF (i .EQ. 2) THEN
281              DO j = 1,nlevels(listId)               DO j = 1,nlevels(listId)
282                ztmp(j) = rF(NINT(levs(j,listId)) + 1)                 ztmp(j) = rF(NINT(levs(j,listId)) + 1)
283              ENDDO               ENDDO
284              CALL MNC_CW_ADD_VATTR_TEXT(dn(1),'description',               CALL MNC_CW_ADD_VATTR_TEXT(dn(1),'description',
285       &           'Dimensional coordinate value at the upper point',       &            'Dimensional coordinate value at the upper point',
286       &           myThid)       &            myThid)
287            ELSEIF (i .EQ. 3) THEN             ELSEIF (i .EQ. 3) THEN
288              DO j = 1,nlevels(listId)               DO j = 1,nlevels(listId)
289                ztmp(j) = rF(NINT(levs(j,listId)))                 ztmp(j) = rF(NINT(levs(j,listId)))
290              ENDDO               ENDDO
291              CALL MNC_CW_ADD_VATTR_TEXT(dn(1),'description',               CALL MNC_CW_ADD_VATTR_TEXT(dn(1),'description',
292       &           'Dimensional coordinate value at the lower point',       &            'Dimensional coordinate value at the lower point',
293       &           myThid)       &            myThid)
294            ENDIF             ENDIF
295  C     suppress the missing value attribute (iflag = 0)  C     suppress the missing value attribute (iflag = 0)
296            IF (useMissingValue)             IF (useMissingValue)
297       &         CALL MNC_CW_VATTR_MISSING(dn(1), 0,       &          CALL MNC_CW_VATTR_MISSING(dn(1), 0,
298       I         misval_r8, misval_r4, misval_int,       I          misval_r8, misval_r4, misval_int,
299       I         myThid )       I          myThid )
300            CALL MNC_CW_RS_W('D',diag_mnc_bn,0,0, dn(1), ztmp, myThid)             CALL MNC_CW_RS_W('D',diag_mnc_bn,0,0, dn(1), ztmp, myThid)
301            CALL MNC_CW_DEL_VNAME(dn(1), myThid)             CALL MNC_CW_DEL_VNAME(dn(1), myThid)
302            CALL MNC_CW_DEL_GNAME(dn(1), myThid)             CALL MNC_CW_DEL_GNAME(dn(1), myThid)
303          ENDDO           ENDDO
304  #endif /*  DIAG_MNC_COORD_NEEDSWORK  */  #endif /*  DIAG_MNC_COORD_NEEDSWORK  */
305    
306        ENDIF         ENDIF
307  #endif /*  ALLOW_MNC  */  #endif /*  ALLOW_MNC  */
308    
309  C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----|  C---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----|
310    
311        DO md = 1,nfields(listId)         DO md = 1,nfields(listId)
312          ndId = jdiag(md,listId)          ndId = jdiag(md,listId)
313          gcode = gdiag(ndId)(1:10)          gcode = gdiag(ndId)(1:10)
314          mate = 0          mate = 0
# Line 248  C-      Check for Mate of a Vector Diagn Line 322  C-      Check for Mate of a Vector Diagn
322          ENDIF          ENDIF
323          IF ( idiag(md,listId).NE.0 .AND. gcode(5:5).NE.'D' ) THEN          IF ( idiag(md,listId).NE.0 .AND. gcode(5:5).NE.'D' ) THEN
324  C--     Start processing 1 Fld :  C--     Start processing 1 Fld :
325    #ifdef ALLOW_MNC
326             DO ll=1,llMx
327              lm = jj+ll-1
328    #else
329           DO lm=1,averageCycle(listId)           DO lm=1,averageCycle(listId)
330    #endif
331    
332            ip = ABS(idiag(md,listId)) + kdiag(ndId)*(lm-1)            ip = ABS(idiag(md,listId)) + kdiag(ndId)*(lm-1)
333            im = mdiag(md,listId)            im = mdiag(md,listId)
# Line 286  C-        Empty diagnostics case : Line 365  C-        Empty diagnostics case :
365              _END_MASTER( myThid )              _END_MASTER( myThid )
366              DO bj = myByLo(myThid), myByHi(myThid)              DO bj = myByLo(myThid), myByHi(myThid)
367                DO bi = myBxLo(myThid), myBxHi(myThid)                DO bi = myBxLo(myThid), myBxHi(myThid)
368                  DO k = 1,nlevels(listId)                  DO k = 1,nLevOutp
369                    DO j = 1-OLy,sNy+OLy                    DO j = 1-OLy,sNy+OLy
370                      DO i = 1-OLx,sNx+OLx                      DO i = 1-OLx,sNx+OLx
371                        qtmp1(i,j,k,bi,bj) = 0. _d 0                        qtmp1(i,j,k,bi,bj) = 0. _d 0
# Line 299  C-        Empty diagnostics case : Line 378  C-        Empty diagnostics case :
378            ELSE            ELSE
379  C-        diagnostics is not empty :  C-        diagnostics is not empty :
380    
381              IF ( debugLevel.GE.debLevA .AND. myThid.EQ.1 ) THEN              IF ( debugLevel.GE.debLevB .AND. myThid.EQ.1 ) THEN
382                WRITE(ioUnit,'(A,I6,3A,I8,2A)')                WRITE(ioUnit,'(A,I6,3A,I8,2A)')
383       &         ' Computing Diagnostic # ', ndId, '  ', cdiag(ndId),       &         ' Computing Diagnostic # ', ndId, '  ', cdiag(ndId),
384       &         '     Counter:',ndiag(ip,1,1),'   Parms: ',gdiag(ndId)       &         '     Counter:',ndiag(ip,1,1),'   Parms: ',gdiag(ndId)
# Line 322  C-        diagnostics is not empty : Line 401  C-        diagnostics is not empty :
401                ENDIF                ENDIF
402              ENDIF              ENDIF
403    
404              IF ( fflags(listId)(2:2).EQ.'P' ) THEN              IF ( fflags(listId)(2:2).NE.' ' ) THEN
405  C-       get all the levels (for vertical interpolation)  C-       get all the levels (for vertical post-processing)
406                DO bj = myByLo(myThid), myByHi(myThid)                DO bj = myByLo(myThid), myByHi(myThid)
407                 DO bi = myBxLo(myThid), myBxHi(myThid)                 DO bi = myBxLo(myThid), myBxHi(myThid)
408                  DO k = 1,kdiag(ndId)                  DO k = 1,kdiag(ndId)
# Line 349  C-       get only selected levels: Line 428  C-       get only selected levels:
428                ENDDO                ENDDO
429              ENDIF              ENDIF
430    
 C-        end of empty diag / not empty block  
           ENDIF  
   
431  C-----------------------------------------------------------------------  C-----------------------------------------------------------------------
432  C         Check to see if we need to interpolate before output  C--     Apply specific post-processing (e.g., interpolate) before output
433  C-----------------------------------------------------------------------  C-----------------------------------------------------------------------
434            IF ( fflags(listId)(2:2).EQ.'P' ) THEN              IF ( fflags(listId)(2:2).EQ.'P' ) THEN
435  C-        Do vertical interpolation:  C-          Do vertical interpolation:
436             IF ( fluidIsAir ) THEN               IF ( fluidIsAir ) THEN
437  C jmc: for now, this can only work in an atmospheric set-up (fluidIsAir);  C jmc: for now, this can only work in an atmospheric set-up (fluidIsAir);
438              CALL DIAGNOSTICS_INTERP_VERT(                CALL DIAGNOSTICS_INTERP_VERT(
439       I                     listId, md, ndId, ip, im, lm,       I                         listId, md, ndId, ip, im, lm,
440       U                     qtmp1,       U                         qtmp1,
441       I                     undef, myTime, myIter, myThid )       I                         undef, myTime, myIter, myThid )
442             ELSE               ELSE
443               WRITE(msgBuf,'(2A)') 'DIAGNOSTICS_OUT: ',                 WRITE(msgBuf,'(2A)') 'DIAGNOSTICS_OUT: ',
444       &         'INTERP_VERT not allowed in this config'       &           'INTERP_VERT not allowed in this config'
445               CALL PRINT_ERROR( msgBuf , myThid )                 CALL PRINT_ERROR( msgBuf , myThid )
446               STOP 'ABNORMAL END: S/R DIAGNOSTICS_OUT'                 STOP 'ABNORMAL END: S/R DIAGNOSTICS_OUT'
447             ENDIF               ENDIF
448                ENDIF
449                IF ( fflags(listId)(2:2).EQ.'I' ) THEN
450    C-          Integrate vertically: for now, output field has just 1 level:
451                  CALL DIAGNOSTICS_SUM_LEVELS(
452         I                         listId, md, ndId, ip, im, lm,
453         U                         qtmp1,
454         I                         undef, myTime, myIter, myThid )
455                ENDIF
456    
457    C--     End of empty diag / not-empty diag block
458            ENDIF            ENDIF
459    
460  C--    Ready to write field "md", element "lm" in averageCycle(listId)  C--     Ready to write field "md", element "lm" in averageCycle(listId)
461    
462  C-        write to binary file, using MDSIO pkg:  C-        write to binary file, using MDSIO pkg:
463            IF ( diag_mdsio ) THEN            IF ( diag_mdsio ) THEN
# Line 384  C           fFlag(1)=R(or D): force it t Line 470  C           fFlag(1)=R(or D): force it t
470  C         a hack not to write meta files now: pass -nRec < 0 to MDS_WRITE S/R  C         a hack not to write meta files now: pass -nRec < 0 to MDS_WRITE S/R
471              CALL WRITE_REC_LEV_RL(              CALL WRITE_REC_LEV_RL(
472       I                            fn, prec,       I                            fn, prec,
473       I                            NrMax, 1, nlevels(listId),       I                            NrMax, 1, nLevOutp,
474       I                            qtmp1, -nRec, myIter, myThid )       I                            qtmp1, -nRec, myIter, myThid )
475            ENDIF            ENDIF
476    
# Line 435  C           XY dimensions Line 521  C           XY dimensions
521              ENDIF              ENDIF
522    
523  C           Z is special since it varies  C           Z is special since it varies
524              WRITE(dn(3),'(a,i6.6)') 'Zd', nlevels(listId)              WRITE(dn(3),'(a,i6.6)') 'Zd', nLevOutp
525              IF ( (gdiag(ndId)(10:10) .EQ. 'R')              IF ( (gdiag(ndId)(10:10) .EQ. 'R')
526       &           .AND. (gdiag(ndId)(9:9) .EQ. 'M') ) THEN       &           .AND. (gdiag(ndId)(9:9) .EQ. 'M') ) THEN
527                WRITE(dn(3),'(a,i6.6)') 'Zmd', nlevels(listId)                WRITE(dn(3),'(a,i6.6)') 'Zmd', nLevOutp
528              ENDIF              ENDIF
529              IF ( (gdiag(ndId)(10:10) .EQ. 'R')              IF ( (gdiag(ndId)(10:10) .EQ. 'R')
530       &           .AND. (gdiag(ndId)(9:9) .EQ. 'L') ) THEN       &           .AND. (gdiag(ndId)(9:9) .EQ. 'L') ) THEN
531                WRITE(dn(3),'(a,i6.6)') 'Zld', nlevels(listId)                WRITE(dn(3),'(a,i6.6)') 'Zld', nLevOutp
532              ENDIF              ENDIF
533              IF ( (gdiag(ndId)(10:10) .EQ. 'R')              IF ( (gdiag(ndId)(10:10) .EQ. 'R')
534       &           .AND. (gdiag(ndId)(9:9) .EQ. 'U') ) THEN       &           .AND. (gdiag(ndId)(9:9) .EQ. 'U') ) THEN
535                WRITE(dn(3),'(a,i6.6)') 'Zud', nlevels(listId)                WRITE(dn(3),'(a,i6.6)') 'Zud', nLevOutp
536              ENDIF              ENDIF
537              dim(3) = NrMax              dim(3) = NrMax
538              ib(3)  = 1              ib(3)  = 1
539              ie(3)  = nlevels(listId)              ie(3)  = nLevOutp
540    
541  C           Time dimension  C           Time dimension
542              dn(4)(1:1) = 'T'              dn(4)(1:1) = 'T'
# Line 473  C     Missing values only for scalar dia Line 559  C     Missing values only for scalar dia
559              IF ( useMisValForThisDiag ) THEN              IF ( useMisValForThisDiag ) THEN
560  C     assign missing values and set flag for adding the netCDF atttibute  C     assign missing values and set flag for adding the netCDF atttibute
561               CALL MNC_CW_VATTR_MISSING(cdiag(ndId), 2,               CALL MNC_CW_VATTR_MISSING(cdiag(ndId), 2,
562       I            misval_r8, misval_r4, misval_int,       I            misval_r8, misval_r4, misval_int,
563       I            myThid )       I            myThid )
564  C     and now use the missing values for masking out the land points  C     and now use the missing values for masking out the land points
565    C     note: better to use 2-D mask if kdiag <> Nr or vert.integral
566               DO bj = myByLo(myThid), myByHi(myThid)               DO bj = myByLo(myThid), myByHi(myThid)
567                DO bi = myBxLo(myThid), myBxHi(myThid)                DO bi = myBxLo(myThid), myBxHi(myThid)
568                 DO k = 1,nlevels(listId)                 DO k = 1,nLevOutp
569                  klev = NINT(levs(k,listId))                  klev = NINT(levs(k,listId))
570                    IF ( fflags(listId)(2:2).EQ.'I' ) kLev = 1
571                  DO j = 1-OLy,sNy+OLy                  DO j = 1-OLy,sNy+OLy
572                   DO i = 1-OLx,sNx+OLx                   DO i = 1-OLx,sNx+OLx
573                    IF ( _hFacC(I,J,klev,bi,bj) .EQ. 0. )                    IF ( maskC(i,j,klev,bi,bj) .EQ. 0. )
574       &                 qtmp1(i,j,k,bi,bj) = misvalLoc       &                 qtmp1(i,j,k,bi,bj) = misvalLoc
575                   ENDDO                   ENDDO
576                  ENDDO                  ENDDO
# Line 494  C     suppress the missing value attribu Line 582  C     suppress the missing value attribu
582  C     Note: We have to call the following subroutine for each mnc that has  C     Note: We have to call the following subroutine for each mnc that has
583  C     been created "on the fly" by mnc_cw_add_vname and will be deleted  C     been created "on the fly" by mnc_cw_add_vname and will be deleted
584  C     by mnc_cw_del_vname, because all of these variables use the same  C     by mnc_cw_del_vname, because all of these variables use the same
585  C     identifier so that mnc_cw_vfmv(indv) needs to be overwritten for  C     identifier so that mnc_cw_vfmv(indv) needs to be overwritten for
586  C     each of these variables  C     each of these variables
587               CALL MNC_CW_VATTR_MISSING(cdiag(ndId), 0,               CALL MNC_CW_VATTR_MISSING(cdiag(ndId), 0,
588       I            misval_r8, misval_r4, misval_int,       I            misval_r8, misval_r4, misval_int,
589       I            myThid )       I            myThid )
590              ENDIF              ENDIF
591    
592              IF ( ( (writeBinaryPrec .EQ. precFloat32)              IF (  ((writeBinaryPrec .EQ. precFloat32)
593       &           .AND. (fflags(listId)(1:1) .NE. 'D')       &            .AND. (fflags(listId)(1:1) .NE. 'D'))
594       &           .AND. (fflags(listId)(1:1) .NE. 'R') )       &             .OR. (fflags(listId)(1:1) .EQ. 'R') ) THEN
      &           .OR. (fflags(listId)(1:1) .EQ. 'R')) THEN  
595                CALL MNC_CW_RL_W('R',diag_mnc_bn,0,0,                CALL MNC_CW_RL_W('R',diag_mnc_bn,0,0,
596       &             cdiag(ndId), qtmp1, myThid)       &             cdiag(ndId), qtmp1, myThid)
597              ELSEIF ( (writeBinaryPrec .EQ. precFloat64)              ELSEIF ( (writeBinaryPrec .EQ. precFloat64)
# Line 521  C     each of these variables Line 608  C     each of these variables
608            ENDIF            ENDIF
609  #endif /*  ALLOW_MNC  */  #endif /*  ALLOW_MNC  */
610    
611    C--      end loop on lm (or ll if ALLOW_MNC) counter
612           ENDDO           ENDDO
613  C--     end of Processing Fld # md  C--     end of Processing Fld # md
614          ENDIF          ENDIF
615           ENDDO
616    
617    #ifdef ALLOW_MNC
618    C--   end loop on jj counter
619        ENDDO        ENDDO
620    #endif
621    
622  #ifdef ALLOW_MDSIO  #ifdef ALLOW_MDSIO
623        IF (diag_mdsio) THEN        IF (diag_mdsio) THEN
624  C-    Note: temporary: since it's a pain to add more arguments to  C-    Note: temporary: since it is a pain to add more arguments to
625  C     all MDSIO S/R, uses instead this specific S/R to write only  C     all MDSIO S/R, uses instead this specific S/R to write only
626  C     meta files but with more informations in it.  C     meta files but with more informations in it.
627              glf = globalFiles              glf = globalFiles
628              nRec = nfields(listId)*averageCycle(listId)              nRec = nfields(listId)*averageCycle(listId)
629              CALL MDS_WR_METAFILES(fn, prec, glf, .FALSE.,              CALL MDS_WR_METAFILES(fn, prec, glf, .FALSE.,
630       &              0, 0, nlevels(listId), ' ',       &              0, 0, nLevOutp, ' ',
631       &              nfields(listId), flds(1,listId), 1, myTime,       &              nfields(listId), flds(1,listId), nTimRec, timeRec,
632       &              nRec, myIter, myThid)       &              nRec, myIter, myThid)
633        ENDIF        ENDIF
634  #endif /*  ALLOW_MDSIO  */  #endif /*  ALLOW_MDSIO  */
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