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- add global mean contributions (via the newly added objfc) to fc after the cost_final.F global sum.
rename COST_CPPOPTIONS.h to COST_OPTIONS.h
- cost_final.F : allow for use of pkg/ecco and pkg/cost cost functions jointly. The exclusive ifdefs were removed, so that costs terms (when defined) from both packages are all added to fc. Notes : 1) the fc global sum in pkg/ecco was removed accordingly; 2) for objf_atl we use either the pkg/ecco or the pkg/cost term depending on CPPs. - ALLOW_COST_ATLANTIC_HEAT vs ALLOW_COST_ATLANTIC : attempt to sort out ALLOW_COST_ATLANTIC (in ecco) vs ALLOW_COST_ATLANTIC_HEAT (in cost) that both use objf_atl (from cost). - add comments to explain special and/or untested setups.
remove #include "PACKAGES_CONFIG.h" (now included from COST_CPPOPTIONS.h)
add missing cvs $Header:$ or $Name:$
o Changes in cost to compute \bar{T*V} instead of \bar{T}*{V} o one fix in pkg/flt
Making the "last interal means" cMean* always available within cost package
Modifications for bottom topography control o replace hFacC by _hFacC at various places o replace ALLOW_HFACC_CONTROL by ALLOW_DEPTH_CONTROL o add non-self-adjoint cg2d_nsa o update autodiff support routines o re-initialise hfac after ctrl_depth_ini o works for 5x5 box, doesnt work for global_ocean.90x40x15
Make pkg/profile fully independent of ecco,cost, etc. stuff to be able to use it in pure forward.
o package cost profiles routines to better modularize them.
o Adding flag admtlmBypassAD to focus on propagator EV problem o clean up objf_state_final discrepancies (SST/SSS vs. full state)
Extend cMean fields to ALLOW_COST_TEST
Moving seaice-related cost to pkg/seaice/
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