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C $Header: /u/gcmpack/MITgcm/pkg/bling/bling_readparms.F,v 1.10 2017/03/16 17:03:26 mmazloff Exp $ |
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C $Name: BASE $ |
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|
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#include "BLING_OPTIONS.h" |
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#ifdef ALLOW_EXF |
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# include "EXF_OPTIONS.h" |
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#endif |
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|
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CBOP |
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SUBROUTINE BLING_READPARMS( myThid ) |
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|
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C *========================================================* |
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C | subroutine bling_readparms |
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C | o Initialise and read parameters for BLING model |
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C *========================================================* |
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|
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implicit none |
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|
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C === Global variables === |
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#include "SIZE.h" |
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#include "EEPARAMS.h" |
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#include "PARAMS.h" |
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#ifdef USE_EXFCO2 |
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# ifdef USE_EXF_INTERPOLATION |
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# ifdef ALLOW_EXCH2 |
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# include "W2_EXCH2_SIZE.h" |
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# include "W2_EXCH2_TOPOLOGY.h" |
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# endif /* ALLOW_EXCH2 */ |
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# include "SET_GRID.h" |
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# endif /* USE_EXF_INTERPOLATION */ |
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# include "EXF_PARAM.h" |
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# include "EXF_CONSTANTS.h" |
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#endif /* USE_EXFCO2 */ |
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#include "BLING_VARS.h" |
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|
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C === Routine arguments === |
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C myThid :: My Thread Id. number |
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INTEGER myThid |
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CEOP |
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|
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#ifdef ALLOW_BLING |
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|
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C === Local variables === |
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C msgBuf :: Informational/error message buffer |
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C errCount :: error counter |
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C iUnit :: Work variable for IO unit number |
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CHARACTER*(MAX_LEN_MBUF) msgBuf |
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INTEGER errCount |
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INTEGER iUnit |
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|
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C ========================================================== |
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C Abiotic parameters |
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C ========================================================== |
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|
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NAMELIST /ABIOTIC_PARMS/ |
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& permil, Pa2Atm |
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|
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C ========================================================== |
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C BLING parameters |
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C ========================================================== |
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|
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NAMELIST /BIOTIC_PARMS/ |
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& pivotal, |
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& Pc_0, |
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& Pc_0_diaz, |
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& lambda_0, |
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& chl_min, |
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& CtoN, |
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& NO3toN, |
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& HtoC, |
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& O2toN, |
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& CatoN, |
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& masstoN, |
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& alpha_photo, |
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& theta_Fe_max_hi, |
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& theta_Fe_max_lo, |
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& gamma_irr_mem, |
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& gamma_DON, |
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& gamma_DOP, |
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& gamma_POM, |
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& k_Fe, |
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& k_Fe_diaz, |
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& k_O2, |
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& k_NO3, |
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& k_PO4, |
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& k_PtoN, |
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& k_FetoN, |
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& kFe_eq_lig_max, |
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& kFe_eq_lig_min, |
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& kFe_eq_lig_Femin, |
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& kFe_eq_lig_irr, |
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& kFe_org, |
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& kFe_inorg, |
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& PtoN_min, |
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& PtoN_max, |
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& FetoN_min, |
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& FetoN_max, |
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& FetoC_sed, |
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& remin_min, |
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& oxic_min, |
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& ligand, |
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& kappa_eppley, |
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& kappa_eppley_diaz, |
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& kappa_remin, |
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& ca_remin_depth, |
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& phi_DOM, |
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& phi_sm, |
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& phi_lg, |
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& phi_dvm, |
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& sigma_dvm, |
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& wsink0z, |
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& wsink0, |
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& wsinkacc, |
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& parfrac, |
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& alpfe, |
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& k0, |
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& epsln |
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|
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C ========================================================== |
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C BLING forcing |
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C ========================================================== |
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|
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NAMELIST /BLING_FORCING/ |
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& bling_windFile, bling_atmospFile, bling_iceFile, |
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& bling_ironFile, bling_silicaFile, |
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& bling_psmFile, bling_plgFile, bling_PdiazFile, |
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& bling_forcingPeriod, bling_forcingCycle, |
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& bling_pCO2, river_conc_trac, |
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& bling_Pc_2dFile, bling_Pc_2d_diazFile, |
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& bling_alpha_photo2dFile,bling_phi_DOM2dFile, |
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& bling_k_Fe2dFile, bling_k_Fe_diaz2dFile, |
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& bling_gamma_POM2dFile, bling_wsink0_2dFile, |
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& bling_phi_sm2dFile,bling_phi_lg2dFile |
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#ifdef USE_EXFCO2 |
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& , apco2file, apco2startdate1, apco2startdate2, |
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& apco2RepCycle, apco2period, apco2StartTime, |
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& exf_inscal_apco2, exf_outscal_apco2, apco2const, |
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& apco2_exfremo_intercept, apco2_exfremo_slope |
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#ifdef USE_EXF_INTERPOLATION |
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& , apco2_lon0, apco2_lon_inc, apco2_lat0, apco2_lat_inc, |
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& apco2_nlon, apco2_nlat, apco2_interpMethod |
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#endif /* USE_EXF_INTERPOLATION */ |
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#endif |
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|
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C ========================================================== |
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C secperday :: seconds in a day = 24*60*60 |
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C permil :: set carbon mol/m3 <---> mol/kg conversion factor |
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C default permil = 1024.5 kg/m3 |
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C Pa2Atm :: Conversion factor for atmospheric pressure pLoad |
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C (when coupled to atmospheric model) into Atm. |
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C Default assumes pLoad in Pascal |
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C 1 Atm = 1.01325e5 Pa = 1013.25 mb |
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C pivotal :: Pivotal phytoplankton biomass |
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C Pc_0 :: Maximum phytoplankton carbon-specific growth rate at 0C |
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C Pc_0_diaz :: Maximum diazotroph carbon-specific growth rate at 0C |
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C lambda_0 :: Carbon-specific phytoplankton mortality rate |
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C chl_min :: minimum chlorophyll concentration [ug kg-1] |
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C CtoN :: Carbon to nitrogen ratio in organic matter |
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C NO3toN :: |
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C HtoC :: |
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C O2toN :: Oxygen to nitrogen for biological activity |
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C CatoN :: Calcium to nitrogen uptake by small phyto |
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C masstoN :: |
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C alpha_photo :: [g C g Chl-1 m2 W-1 s-1] |
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C theta_Fe_max_hi :: Maximum Chl:c ratio, abundant iron |
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C theta_Fe_max_lo :: Maximum Chl:c ratio, extreme iron limitation |
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C gamma_irr_mem :: Photoadaptation time scale |
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C gamma_DON :: Decay timescale of DON |
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C gamma_DOP :: Decay timescale of DOP |
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C gamma_POM :: |
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C k_Fe :: Dissolved Fe uptake half-saturation constant |
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C k_Fe_diaz :: Dissolved Fe uptake half-saturation constant for diazotrophs |
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C k_O2 :: Half-saturation constant for aerobic respiration |
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C k_NO3 :: Nitrate uptake half-saturation constant |
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C k_PO4 :: Phosphate uptake half-saturation constant |
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C k_PtoN :: Half-saturation cellular P:N |
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C k_FetoN :: Half-saturation cellular Fe:N |
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C kFe_eq_lig_max :: Maximum Fe-ligand stability constant |
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C kFe_eq_lig_min :: Minimum Fe-ligand stability constant |
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C kFe_eq_lig_Femin :: Constant having to do with photodissociation |
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C kFe_eq_lig_irr :: Iron ligand stability constant |
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C kFe_org :: Organic-matter dependent scavenging rate |
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C kFe_inorg :: Inorganic scavenging rate |
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C PtoN_min :: Minimum P:N uptake ratio |
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C PtoN_max :: Maximum P:N uptake ratio |
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C FetoN_min :: Minimum Fe:N uptake ratio |
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C FetoN_max :: Maximum Fe:N uptake ratio |
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C FetoC_sed :: Fe:P in sediments |
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C remin_min :: Minimum anaerobic respiration rate |
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C oxic_min :: Minimum O2 concentration for aerobic respiration |
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C ligand :: Ligand concentration |
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C kappa_eppley :: Temperature dependence of growth |
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C kappa_eppley_diaz:: Temperature dependence of growth for diazotrophs |
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C kappa_remin :: Temperature dependence of remineralization |
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C ca_remin_depth :: CaCO3 remineralization lengthscale |
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C phi_DOM :: Fraction of non-sinking production to DOM |
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C phi_sm :: Fraction of small phytoplankton biomass converted to detritus |
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C phi_lg :: Fraction of large phytoplankton biomass converted to detritus |
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C phi_dvm :: |
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C sigma_dvm :: |
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C wsink0z :: Depth at which sinking rate starts increasing |
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C wsink0 :: Initial sinking rate |
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C wsinkacc :: Acceleration rate of sinking with depth |
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C parfrac :: fraction of Qsw avail for photosynthesis |
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C alpfe :: solubility of aeolian iron |
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C k0 :: Light attentuation coefficient |
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C epsln :: a very small number |
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|
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_RL secperday |
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integer k |
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#ifdef USE_EXF_INTERPOLATION |
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INTEGER gridNx, gridNy |
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INTEGER j |
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_RL inp_lon0, inp_lat0, inp_dLon, inp_dLat |
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#endif |
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|
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_BEGIN_MASTER(myThid) |
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errCount = 0 |
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|
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C ========================================================== |
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C Default values |
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|
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secperday = 86400. _d 0 |
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permil = 1. _d 0 / 1024.5 _d 0 |
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Pa2Atm = 1.01325 _d 5 |
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CtoN = 6.75 _d 0 |
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HtoC = 48. _d 0 / 106. _d 0 |
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O2toN = CtoN * (1. _d 0 + 0.25 _d 0 * HtoC) |
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& + 2. _d 0 |
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NO3toN = CtoN * (1. _d 0 + 0.25 _d 0 * HtoC) |
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& * 0.8 _d 0 + 0.6 _d 0 |
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CatoN = CtoN * 0.015 _d 0 |
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masstoN = CtoN * 12.001 _d 0 |
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pivotal = 1.9 _d -3 / 1028. _d 0 / CtoN / permil |
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Pc_0 = 1.7 _d -5 |
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Pc_0_diaz = 0.01 _d -5 |
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lambda_0 = 0.19 _d 0 / secperday |
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chl_min = 1. _d -5 |
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alpha_photo = 0.7 _d -5 * 2.77 _d 18 / 6.022 _d 17 |
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theta_Fe_max_hi = 0.04 _d 0 |
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theta_Fe_max_lo = 0.01 _d 0 |
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gamma_irr_mem = 1. _d 0 / secperday |
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gamma_DON = 0.25 _d 0 / (365.25 _d 0 * secperday) |
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gamma_DOP = 0.5 _d 0 / (365.25 _d 0 * secperday) |
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gamma_POM = 0.12 _d 0 / secperday |
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k_Fe = 1.6 _d -10 / permil |
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k_Fe_diaz = 7. _d -10 / permil |
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k_O2 = 20. _d -6 / permil |
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k_NO3 = 2. _d -6 / permil |
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k_PO4 = 1. _d -8 / permil |
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k_PtoN = 1.5 _d -6 / permil |
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k_FetoN = 8. _d -10 / permil |
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PtoN_min = 1. / 28. |
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PtoN_max = 1. / 9. |
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FetoN_min = 2. _d -6 * 6.75 |
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FetoN_max = 25. _d -6 * 6.75 |
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FetoC_sed = 1. _d -4 |
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kFe_eq_lig_max = 8.0 _d 10 * permil |
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kFe_eq_lig_min = 8.0 _d 9 * permil |
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kFe_eq_lig_Femin = 0.05 _d -9 / permil |
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kFe_eq_lig_irr = 0.1 _d 0 |
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kFe_org = 0.5 _d 0 / secperday * permil**(0.58) |
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kFe_inorg = 1. _d 3 / secperday * permil**(0.5) |
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remin_min = 0.15 _d 0 |
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oxic_min = 1. _d -6 / permil |
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Ligand = 1. _d -9 / permil |
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kappa_eppley = 0.063 _d 0 |
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kappa_eppley_diaz = 0.18 _d 0 |
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kappa_remin = -0.032 _d 0 |
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ca_remin_depth = 1343. _d 0 |
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phi_DOM = 0.1 _d 0 |
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phi_sm = 0.18 _d 0 |
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phi_lg = 1. _d 0 |
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phi_dvm = 0.2 _d 0 |
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sigma_dvm = 40.0 _d 0 |
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wsink0z = 80. _d 0 |
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wsink0 = 16. _d 0 / secperday |
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wsinkacc = 0.05 _d 0 / secperday |
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parfrac = 0.4 _d 0 |
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alpfe = 0.01 _d 0 |
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k0 = 0.04 _d 0 |
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epsln = 1. _d -30 |
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|
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bling_windFile = ' ' |
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bling_atmospFile= ' ' |
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bling_iceFile = ' ' |
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bling_ironFile = ' ' |
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bling_silicaFile= ' ' |
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bling_psmFile = ' ' |
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bling_plgFile = ' ' |
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bling_pdiazFile = ' ' |
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bling_pCO2 = 278. _d -6 |
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DO k=1,8 |
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river_conc_trac(k) = 0. _d 0 |
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ENDDO |
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bling_Pc_2dFile = ' ' |
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bling_Pc_2d_diazFile = ' ' |
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bling_alpha_photo2dFile= ' ' |
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bling_k_Fe2dFile = ' ' |
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bling_k_Fe_diaz2dFile = ' ' |
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bling_gamma_POM2dFile = ' ' |
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bling_wsink0_2dFile = ' ' |
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bling_phi_DOM2dFile = ' ' |
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bling_phi_sm2dFile = ' ' |
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bling_phi_lg2dFile = ' ' |
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|
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#ifdef USE_EXFCO2 |
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apco2startdate1 = 0 |
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apco2startdate2 = 0 |
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apco2StartTime = UNSET_RL |
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apco2period = 0.0 _d 0 |
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apco2RepCycle = repeatPeriod |
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apco2const = 0.0 _d 0 |
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apco2_exfremo_intercept = 0.0 _d 0 |
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apco2_exfremo_slope = 0.0 _d 0 |
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apco2file = ' ' |
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exf_inscal_apco2 = 1. _d 0 |
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exf_outscal_apco2 = 1. _d 0 |
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#ifdef USE_EXF_INTERPOLATION |
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C-- set default input location to match (in case of simple Lat-Long grid) |
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C model grid cell-center position (leading to trivial interpolation) |
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inp_lon0 = xgOrigin + delX(1)*exf_half |
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inp_lat0 = ygOrigin + delY(1)*exf_half |
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inp_dLon = delX(1) |
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inp_dLat = delY(1) |
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apco2_lon0 = inp_lon0 |
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apco2_lat0 = inp_lat0 |
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apco2_nlon = gridNx |
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apco2_nlat = gridNy |
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apco2_lon_inc = inp_dLon |
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DO j=1,MAX_LAT_INC |
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IF (j.LT.gridNy) THEN |
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inp_dLat = (delY(j) + delY(j+1))*exf_half |
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ELSE |
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inp_dLat = 0. |
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ENDIF |
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apco2_lat_inc(j) = inp_dLat |
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ENDDO |
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#endif /* USE_EXF_INTERPOLATION */ |
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#endif |
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|
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C default periodic forcing to same as for physics |
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bling_forcingPeriod = externForcingPeriod |
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bling_forcingCycle = externForcingCycle |
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|
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WRITE(msgBuf,'(A)') ' BLING_READPARMS: opening data.bling' |
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CALL PRINT_MESSAGE( msgBuf, standardMessageUnit, |
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I SQUEEZE_RIGHT, myThid ) |
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|
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CALL OPEN_COPY_DATA_FILE( 'data.bling', 'BLING_READPARMS', |
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O iUnit, myThid ) |
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|
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C-- Read parameters from open data file: |
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|
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C- Abiotic parameters |
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READ(UNIT=iUnit,NML=ABIOTIC_PARMS) |
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|
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C- BLING parameters |
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READ(UNIT=iUnit,NML=BIOTIC_PARMS) |
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|
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C- forcing filenames and parameters |
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READ(UNIT=iUnit,NML=BLING_FORCING) |
| 363 |
|
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WRITE(msgBuf,'(A)') |
| 365 |
& ' BLING_READPARMS: finished reading data.BLING' |
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CALL PRINT_MESSAGE( msgBuf, standardMessageUnit, |
| 367 |
I SQUEEZE_RIGHT, myThid ) |
| 368 |
|
| 369 |
C-- Close the open data file |
| 370 |
#ifdef SINGLE_DISK_IO |
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CLOSE(iUnit) |
| 372 |
#else |
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CLOSE(iUnit,STATUS='DELETE') |
| 374 |
#endif /* SINGLE_DISK_IO */ |
| 375 |
|
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C- derive other parameters: |
| 377 |
|
| 378 |
QSW_underice = .FALSE. |
| 379 |
#ifdef USE_QSW_UNDERICE |
| 380 |
QSW_underice = .TRUE. |
| 381 |
#elif (defined (USE_QSW)) |
| 382 |
C if using Qsw and seaice, then ice fraction is already |
| 383 |
C taken into account |
| 384 |
IF ( useSEAICE ) QSW_underice = .TRUE. |
| 385 |
IF ( useThSIce ) QSW_underice = .TRUE. |
| 386 |
#endif |
| 387 |
|
| 388 |
IF ( errCount.GE.1 ) THEN |
| 389 |
WRITE(msgBuf,'(A,I3,A)') |
| 390 |
& 'BLING_READPARMS: detected', errCount,' fatal error(s)' |
| 391 |
CALL PRINT_ERROR( msgBuf, myThid ) |
| 392 |
CALL ALL_PROC_DIE( 0 ) |
| 393 |
STOP 'ABNORMAL END: S/R BLING_READPARMS' |
| 394 |
ENDIF |
| 395 |
|
| 396 |
_END_MASTER(myThid) |
| 397 |
|
| 398 |
C-- Everyone else must wait for the parameters to be loaded |
| 399 |
_BARRIER |
| 400 |
|
| 401 |
#endif /* ALLOW_BLING */ |
| 402 |
|
| 403 |
RETURN |
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END |
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