/[MITgcm]/MITgcm/model/src/thermodynamics.F
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Revision 1.79 - (hide annotations) (download)
Tue Oct 19 02:39:58 2004 UTC (19 years, 7 months ago) by jmc
Branch: MAIN
CVS Tags: checkpoint55h_post
Changes since 1.78: +2 -3 lines
use flags: fluidIsAir/Water, usingP/ZCoords instead of buoyancyRelation

1 jmc 1.79 C $Header: /u/gcmpack/MITgcm/model/src/thermodynamics.F,v 1.78 2004/09/17 23:02:00 heimbach Exp $
2 adcroft 1.1 C $Name: $
3    
4 edhill 1.51 #include "PACKAGES_CONFIG.h"
5 adcroft 1.1 #include "CPP_OPTIONS.h"
6 edhill 1.51
7 jmc 1.21 #ifdef ALLOW_AUTODIFF_TAMC
8     # ifdef ALLOW_GMREDI
9     # include "GMREDI_OPTIONS.h"
10     # endif
11     # ifdef ALLOW_KPP
12     # include "KPP_OPTIONS.h"
13 heimbach 1.42 # endif
14 jmc 1.21 #endif /* ALLOW_AUTODIFF_TAMC */
15 adcroft 1.1
16 cnh 1.9 CBOP
17     C !ROUTINE: THERMODYNAMICS
18     C !INTERFACE:
19 adcroft 1.1 SUBROUTINE THERMODYNAMICS(myTime, myIter, myThid)
20 cnh 1.9 C !DESCRIPTION: \bv
21     C *==========================================================*
22     C | SUBROUTINE THERMODYNAMICS
23     C | o Controlling routine for the prognostic part of the
24     C | thermo-dynamics.
25     C *===========================================================
26     C | The algorithm...
27     C |
28     C | "Correction Step"
29     C | =================
30     C | Here we update the horizontal velocities with the surface
31     C | pressure such that the resulting flow is either consistent
32     C | with the free-surface evolution or the rigid-lid:
33     C | U[n] = U* + dt x d/dx P
34     C | V[n] = V* + dt x d/dy P
35     C |
36     C | "Calculation of Gs"
37     C | ===================
38     C | This is where all the accelerations and tendencies (ie.
39     C | physics, parameterizations etc...) are calculated
40     C | rho = rho ( theta[n], salt[n] )
41     C | b = b(rho, theta)
42     C | K31 = K31 ( rho )
43     C | Gu[n] = Gu( u[n], v[n], wVel, b, ... )
44     C | Gv[n] = Gv( u[n], v[n], wVel, b, ... )
45     C | Gt[n] = Gt( theta[n], u[n], v[n], wVel, K31, ... )
46     C | Gs[n] = Gs( salt[n], u[n], v[n], wVel, K31, ... )
47     C |
48     C | "Time-stepping" or "Prediction"
49     C | ================================
50     C | The models variables are stepped forward with the appropriate
51     C | time-stepping scheme (currently we use Adams-Bashforth II)
52     C | - For momentum, the result is always *only* a "prediction"
53     C | in that the flow may be divergent and will be "corrected"
54     C | later with a surface pressure gradient.
55     C | - Normally for tracers the result is the new field at time
56     C | level [n+1} *BUT* in the case of implicit diffusion the result
57     C | is also *only* a prediction.
58     C | - We denote "predictors" with an asterisk (*).
59     C | U* = U[n] + dt x ( 3/2 Gu[n] - 1/2 Gu[n-1] )
60     C | V* = V[n] + dt x ( 3/2 Gv[n] - 1/2 Gv[n-1] )
61     C | theta[n+1] = theta[n] + dt x ( 3/2 Gt[n] - 1/2 atG[n-1] )
62     C | salt[n+1] = salt[n] + dt x ( 3/2 Gt[n] - 1/2 atG[n-1] )
63     C | With implicit diffusion:
64     C | theta* = theta[n] + dt x ( 3/2 Gt[n] - 1/2 atG[n-1] )
65     C | salt* = salt[n] + dt x ( 3/2 Gt[n] - 1/2 atG[n-1] )
66     C | (1 + dt * K * d_zz) theta[n] = theta*
67     C | (1 + dt * K * d_zz) salt[n] = salt*
68     C |
69     C *==========================================================*
70     C \ev
71    
72     C !USES:
73 adcroft 1.1 IMPLICIT NONE
74     C == Global variables ===
75     #include "SIZE.h"
76     #include "EEPARAMS.h"
77     #include "PARAMS.h"
78     #include "DYNVARS.h"
79     #include "GRID.h"
80 adcroft 1.4 #include "GAD.h"
81 stephd 1.75 #ifdef ALLOW_OFFLINE
82     #include "OFFLINE.h"
83     #endif
84 jmc 1.45 #ifdef ALLOW_PTRACERS
85 jmc 1.74 #include "PTRACERS_SIZE.h"
86 jmc 1.45 #include "PTRACERS.h"
87     #endif
88 heimbach 1.42 #ifdef ALLOW_TIMEAVE
89     #include "TIMEAVE_STATV.h"
90     #endif
91    
92 adcroft 1.1 #ifdef ALLOW_AUTODIFF_TAMC
93     # include "tamc.h"
94     # include "tamc_keys.h"
95     # include "FFIELDS.h"
96 heimbach 1.30 # include "EOS.h"
97 adcroft 1.1 # ifdef ALLOW_KPP
98     # include "KPP.h"
99 heimbach 1.67 # endif
100     # ifdef ALLOW_GMREDI
101     # include "GMREDI.h"
102 adcroft 1.1 # endif
103 heimbach 1.68 # ifdef ALLOW_EBM
104     # include "EBM.h"
105 adcroft 1.1 # endif
106     #endif /* ALLOW_AUTODIFF_TAMC */
107    
108 stephd 1.75
109 cnh 1.9 C !INPUT/OUTPUT PARAMETERS:
110 adcroft 1.1 C == Routine arguments ==
111     C myTime - Current time in simulation
112     C myIter - Current iteration number in simulation
113     C myThid - Thread number for this instance of the routine.
114     _RL myTime
115     INTEGER myIter
116     INTEGER myThid
117    
118 cnh 1.9 C !LOCAL VARIABLES:
119 adcroft 1.1 C == Local variables
120     C xA, yA - Per block temporaries holding face areas
121     C uTrans, vTrans, rTrans - Per block temporaries holding flow
122     C transport
123     C o uTrans: Zonal transport
124     C o vTrans: Meridional transport
125     C o rTrans: Vertical transport
126 jmc 1.64 C rTransKp1 o vertical volume transp. at interface k+1
127 adcroft 1.1 C maskUp o maskUp: land/water mask for W points
128     C fVer[STUV] o fVer: Vertical flux term - note fVer
129     C is "pipelined" in the vertical
130     C so we need an fVer for each
131     C variable.
132     C KappaRT, - Total diffusion in vertical for T and S.
133     C KappaRS (background + spatially varying, isopycnal term).
134 jmc 1.39 C useVariableK = T when vertical diffusion is not constant
135 adcroft 1.1 C iMin, iMax - Ranges and sub-block indices on which calculations
136     C jMin, jMax are applied.
137     C bi, bj
138     C k, kup, - Index for layer above and below. kup and kDown
139     C kDown, km1 are switched with layer to be the appropriate
140     C index into fVerTerm.
141     _RS xA (1-OLx:sNx+OLx,1-OLy:sNy+OLy)
142     _RS yA (1-OLx:sNx+OLx,1-OLy:sNy+OLy)
143     _RL uTrans (1-OLx:sNx+OLx,1-OLy:sNy+OLy)
144     _RL vTrans (1-OLx:sNx+OLx,1-OLy:sNy+OLy)
145     _RL rTrans (1-OLx:sNx+OLx,1-OLy:sNy+OLy)
146 jmc 1.64 _RL rTransKp1(1-OLx:sNx+OLx,1-OLy:sNy+OLy)
147 adcroft 1.1 _RS maskUp (1-OLx:sNx+OLx,1-OLy:sNy+OLy)
148     _RL fVerT (1-OLx:sNx+OLx,1-OLy:sNy+OLy,2)
149     _RL fVerS (1-OLx:sNx+OLx,1-OLy:sNy+OLy,2)
150 heimbach 1.55 #ifdef ALLOW_PTRACERS
151     _RL fVerP (1-OLx:sNx+OLx,1-OLy:sNy+OLy,2,PTRACERS_num)
152     #endif
153 adcroft 1.1 _RL KappaRT (1-Olx:sNx+Olx,1-Oly:sNy+Oly,Nr)
154     _RL KappaRS (1-Olx:sNx+Olx,1-Oly:sNy+Oly,Nr)
155     _RL sigmaX (1-OLx:sNx+OLx,1-OLy:sNy+OLy,Nr)
156     _RL sigmaY (1-OLx:sNx+OLx,1-OLy:sNy+OLy,Nr)
157     _RL sigmaR (1-OLx:sNx+OLx,1-OLy:sNy+OLy,Nr)
158 jmc 1.64 _RL kp1Msk
159 jmc 1.39 LOGICAL useVariableK
160 adcroft 1.1 INTEGER iMin, iMax
161     INTEGER jMin, jMax
162     INTEGER bi, bj
163     INTEGER i, j
164     INTEGER k, km1, kup, kDown
165 heimbach 1.55 INTEGER iTracer, ip
166 adcroft 1.1
167 cnh 1.9 CEOP
168 adcroft 1.40
169 edhill 1.56 #ifdef ALLOW_DEBUG
170 heimbach 1.43 IF ( debugLevel .GE. debLevB )
171 jmc 1.63 & CALL DEBUG_ENTER('THERMODYNAMICS',myThid)
172 adcroft 1.40 #endif
173 adcroft 1.1
174     #ifdef ALLOW_AUTODIFF_TAMC
175     C-- dummy statement to end declaration part
176     ikey = 1
177 heimbach 1.30 itdkey = 1
178 adcroft 1.1 #endif /* ALLOW_AUTODIFF_TAMC */
179    
180     #ifdef ALLOW_AUTODIFF_TAMC
181     C-- HPF directive to help TAMC
182     CHPF$ INDEPENDENT
183     #endif /* ALLOW_AUTODIFF_TAMC */
184    
185     DO bj=myByLo(myThid),myByHi(myThid)
186    
187     #ifdef ALLOW_AUTODIFF_TAMC
188     C-- HPF directive to help TAMC
189 heimbach 1.2 CHPF$ INDEPENDENT, NEW (rTrans,fVerT,fVerS
190 jmc 1.37 CHPF$& ,utrans,vtrans,xA,yA
191 heimbach 1.2 CHPF$& ,KappaRT,KappaRS
192 adcroft 1.1 CHPF$& )
193     #endif /* ALLOW_AUTODIFF_TAMC */
194    
195     DO bi=myBxLo(myThid),myBxHi(myThid)
196    
197     #ifdef ALLOW_AUTODIFF_TAMC
198     act1 = bi - myBxLo(myThid)
199     max1 = myBxHi(myThid) - myBxLo(myThid) + 1
200     act2 = bj - myByLo(myThid)
201     max2 = myByHi(myThid) - myByLo(myThid) + 1
202     act3 = myThid - 1
203     max3 = nTx*nTy
204     act4 = ikey_dynamics - 1
205 heimbach 1.30 itdkey = (act1 + 1) + act2*max1
206 adcroft 1.1 & + act3*max1*max2
207     & + act4*max1*max2*max3
208     #endif /* ALLOW_AUTODIFF_TAMC */
209    
210 heimbach 1.41 C-- Set up work arrays with valid (i.e. not NaN) values
211     C These inital values do not alter the numerical results. They
212     C just ensure that all memory references are to valid floating
213     C point numbers. This prevents spurious hardware signals due to
214     C uninitialised but inert locations.
215    
216 adcroft 1.1 DO j=1-OLy,sNy+OLy
217     DO i=1-OLx,sNx+OLx
218 heimbach 1.41 xA(i,j) = 0. _d 0
219     yA(i,j) = 0. _d 0
220     uTrans(i,j) = 0. _d 0
221     vTrans(i,j) = 0. _d 0
222 adcroft 1.1 rTrans (i,j) = 0. _d 0
223 jmc 1.64 rTransKp1(i,j) = 0. _d 0
224 adcroft 1.1 fVerT (i,j,1) = 0. _d 0
225     fVerT (i,j,2) = 0. _d 0
226     fVerS (i,j,1) = 0. _d 0
227     fVerS (i,j,2) = 0. _d 0
228 heimbach 1.55 #ifdef ALLOW_PTRACERS
229     DO ip=1,PTRACERS_num
230     fVerP (i,j,1,ip) = 0. _d 0
231     fVerP (i,j,2,ip) = 0. _d 0
232     ENDDO
233     #endif
234 adcroft 1.1 ENDDO
235     ENDDO
236    
237     DO k=1,Nr
238     DO j=1-OLy,sNy+OLy
239     DO i=1-OLx,sNx+OLx
240     C This is currently also used by IVDC and Diagnostics
241 heimbach 1.30 KappaRT(i,j,k) = 0. _d 0
242     KappaRS(i,j,k) = 0. _d 0
243 jmc 1.45 C- tracer tendency needs to be set to zero (moved here from gad_calc_rhs):
244 heimbach 1.30 gT(i,j,k,bi,bj) = 0. _d 0
245     gS(i,j,k,bi,bj) = 0. _d 0
246 heimbach 1.42 # ifdef ALLOW_PTRACERS
247 edhill 1.51 ceh3 this should have an IF ( usePTRACERS ) THEN
248 heimbach 1.42 DO iTracer=1,PTRACERS_numInUse
249     gPTr(i,j,k,bi,bj,itracer) = 0. _d 0
250     ENDDO
251     # endif
252 adcroft 1.1 ENDDO
253     ENDDO
254     ENDDO
255    
256 jmc 1.72 c iMin = 1-OLx
257     c iMax = sNx+OLx
258     c jMin = 1-OLy
259     c jMax = sNy+OLy
260 adcroft 1.1
261     #ifdef ALLOW_AUTODIFF_TAMC
262     cph avoids recomputation of integrate_for_w
263 heimbach 1.30 CADJ STORE wvel (:,:,:,bi,bj) = comlev1_bibj, key=itdkey, byte=isbyte
264 adcroft 1.1 #endif /* ALLOW_AUTODIFF_TAMC */
265    
266 heimbach 1.22 C-- Attention: by defining "SINGLE_LAYER_MODE" in CPP_OPTIONS.h
267     C-- MOST of THERMODYNAMICS will be disabled
268     #ifndef SINGLE_LAYER_MODE
269    
270 adcroft 1.1 #ifdef ALLOW_AUTODIFF_TAMC
271 heimbach 1.30 CADJ STORE theta(:,:,:,bi,bj) = comlev1_bibj, key=itdkey, byte=isbyte
272     CADJ STORE salt (:,:,:,bi,bj) = comlev1_bibj, key=itdkey, byte=isbyte
273     CADJ STORE uvel (:,:,:,bi,bj) = comlev1_bibj, key=itdkey, byte=isbyte
274     CADJ STORE vvel (:,:,:,bi,bj) = comlev1_bibj, key=itdkey, byte=isbyte
275 heimbach 1.42 #ifdef ALLOW_PTRACERS
276     cph-- moved to forward_step to avoid key computation
277     cphCADJ STORE ptracer(:,:,:,bi,bj,itracer) = comlev1_bibj,
278     cphCADJ & key=itdkey, byte=isbyte
279     #endif
280 adcroft 1.1 #endif /* ALLOW_AUTODIFF_TAMC */
281    
282 adcroft 1.12 #ifndef DISABLE_MULTIDIM_ADVECTION
283 adcroft 1.4 C-- Some advection schemes are better calculated using a multi-dimensional
284     C method in the absence of any other terms and, if used, is done here.
285 adcroft 1.13 C
286     C The CPP flag DISABLE_MULTIDIM_ADVECTION is currently unset in GAD_OPTIONS.h
287     C The default is to use multi-dimensinal advection for non-linear advection
288     C schemes. However, for the sake of efficiency of the adjoint it is necessary
289     C to be able to exclude this scheme to avoid excessive storage and
290     C recomputation. It *is* differentiable, if you need it.
291     C Edit GAD_OPTIONS.h and #define DISABLE_MULTIDIM_ADVECTION to
292     C disable this section of code.
293 stephd 1.75 #ifndef ALLOW_OFFLINE
294 jmc 1.24 IF (tempMultiDimAdvec) THEN
295 edhill 1.56 #ifdef ALLOW_DEBUG
296 heimbach 1.43 IF ( debugLevel .GE. debLevB )
297     & CALL DEBUG_CALL('GAD_ADVECTION',myThid)
298 adcroft 1.40 #endif
299 jmc 1.63 CALL GAD_ADVECTION(
300 jmc 1.69 I tempImplVertAdv, tempAdvScheme, tempVertAdvScheme,
301     I GAD_TEMPERATURE,
302 jmc 1.63 I uVel, vVel, wVel, theta,
303     O gT,
304     I bi,bj,myTime,myIter,myThid)
305 jmc 1.23 ENDIF
306 stephd 1.75 #endif
307     #ifndef ALLOW_OFFLINE
308 jmc 1.24 IF (saltMultiDimAdvec) THEN
309 edhill 1.56 #ifdef ALLOW_DEBUG
310 heimbach 1.43 IF ( debugLevel .GE. debLevB )
311     & CALL DEBUG_CALL('GAD_ADVECTION',myThid)
312 adcroft 1.40 #endif
313 jmc 1.63 CALL GAD_ADVECTION(
314 jmc 1.69 I saltImplVertAdv, saltAdvScheme, saltVertAdvScheme,
315     I GAD_SALINITY,
316 jmc 1.63 I uVel, vVel, wVel, salt,
317     O gS,
318     I bi,bj,myTime,myIter,myThid)
319 adcroft 1.6 ENDIF
320 stephd 1.75 #endif
321 adcroft 1.17 C Since passive tracers are configurable separately from T,S we
322     C call the multi-dimensional method for PTRACERS regardless
323     C of whether multiDimAdvection is set or not.
324     #ifdef ALLOW_PTRACERS
325     IF ( usePTRACERS ) THEN
326 edhill 1.56 #ifdef ALLOW_DEBUG
327 heimbach 1.43 IF ( debugLevel .GE. debLevB )
328     & CALL DEBUG_CALL('PTRACERS_ADVECTION',myThid)
329 adcroft 1.40 #endif
330 adcroft 1.17 CALL PTRACERS_ADVECTION( bi,bj,myIter,myTime,myThid )
331     ENDIF
332     #endif /* ALLOW_PTRACERS */
333 adcroft 1.12 #endif /* DISABLE_MULTIDIM_ADVECTION */
334 adcroft 1.1
335 edhill 1.56 #ifdef ALLOW_DEBUG
336 jmc 1.63 IF ( debugLevel .GE. debLevB )
337 heimbach 1.43 & CALL DEBUG_MSG('ENTERING DOWNWARD K LOOP',myThid)
338 adcroft 1.40 #endif
339    
340 adcroft 1.1 C-- Start of thermodynamics loop
341     DO k=Nr,1,-1
342     #ifdef ALLOW_AUTODIFF_TAMC
343     C? Patrick Is this formula correct?
344     cph Yes, but I rewrote it.
345     cph Also, the KappaR? need the index and subscript k!
346 heimbach 1.30 kkey = (itdkey-1)*Nr + k
347 adcroft 1.1 #endif /* ALLOW_AUTODIFF_TAMC */
348    
349     C-- km1 Points to level above k (=k-1)
350     C-- kup Cycles through 1,2 to point to layer above
351     C-- kDown Cycles through 2,1 to point to current layer
352    
353     km1 = MAX(1,k-1)
354     kup = 1+MOD(k+1,2)
355     kDown= 1+MOD(k,2)
356    
357     iMin = 1-OLx
358     iMax = sNx+OLx
359     jMin = 1-OLy
360     jMax = sNy+OLy
361    
362 jmc 1.64 kp1Msk=1.
363     IF (k.EQ.Nr) kp1Msk=0.
364     DO j=1-Oly,sNy+Oly
365     DO i=1-Olx,sNx+Olx
366     rTransKp1(i,j) = kp1Msk*rTrans(i,j)
367     ENDDO
368     ENDDO
369 heimbach 1.66 #ifdef ALLOW_AUTODIFF_TAMC
370     CADJ STORE rTransKp1(:,:) = comlev1_bibj_k, key=kkey, byte=isbyte
371     #endif
372 jmc 1.64
373 adcroft 1.1 C-- Get temporary terms used by tendency routines
374     CALL CALC_COMMON_FACTORS (
375     I bi,bj,iMin,iMax,jMin,jMax,k,
376     O xA,yA,uTrans,vTrans,rTrans,maskUp,
377     I myThid)
378 jmc 1.19
379 jmc 1.64 IF (k.EQ.1) THEN
380     C- Surface interface :
381     DO j=1-Oly,sNy+Oly
382     DO i=1-Olx,sNx+Olx
383     rTrans(i,j) = 0.
384     ENDDO
385     ENDDO
386     ELSE
387     C- Interior interface :
388     DO j=1-Oly,sNy+Oly
389     DO i=1-Olx,sNx+Olx
390     rTrans(i,j) = rTrans(i,j)*maskC(i,j,k-1,bi,bj)
391     ENDDO
392     ENDDO
393     ENDIF
394    
395 jmc 1.19 #ifdef ALLOW_GMREDI
396 heimbach 1.35
397 jmc 1.19 C-- Residual transp = Bolus transp + Eulerian transp
398     IF (useGMRedi) THEN
399     CALL GMREDI_CALC_UVFLOW(
400     & uTrans, vTrans, bi, bj, k, myThid)
401     IF (K.GE.2) CALL GMREDI_CALC_WFLOW(
402     & rTrans, bi, bj, k, myThid)
403     ENDIF
404 heimbach 1.35
405 heimbach 1.66 #ifdef ALLOW_AUTODIFF_TAMC
406     CADJ STORE rTrans(:,:) = comlev1_bibj_k, key=kkey, byte=isbyte
407 heimbach 1.35 #ifdef GM_BOLUS_ADVEC
408     CADJ STORE uTrans(:,:) = comlev1_bibj_k, key=kkey, byte=isbyte
409     CADJ STORE vTrans(:,:) = comlev1_bibj_k, key=kkey, byte=isbyte
410     #endif
411     #endif /* ALLOW_AUTODIFF_TAMC */
412    
413 jmc 1.19 #endif /* ALLOW_GMREDI */
414 adcroft 1.1
415     #ifdef INCLUDE_CALC_DIFFUSIVITY_CALL
416     C-- Calculate the total vertical diffusivity
417     CALL CALC_DIFFUSIVITY(
418     I bi,bj,iMin,iMax,jMin,jMax,k,
419     I maskUp,
420 heimbach 1.2 O KappaRT,KappaRS,
421 adcroft 1.1 I myThid)
422 heimbach 1.52 # ifdef ALLOW_AUTODIFF_TAMC
423     CADJ STORE KappaRT(:,:,k) = comlev1_bibj_k, key=kkey, byte=isbyte
424     CADJ STORE KappaRS(:,:,k) = comlev1_bibj_k, key=kkey, byte=isbyte
425     # endif /* ALLOW_AUTODIFF_TAMC */
426 adcroft 1.1 #endif
427    
428     iMin = 1-OLx+2
429     iMax = sNx+OLx-1
430     jMin = 1-OLy+2
431     jMax = sNy+OLy-1
432    
433     C-- Calculate active tracer tendencies (gT,gS,...)
434     C and step forward storing result in gTnm1, gSnm1, etc.
435 stephd 1.75 #ifndef ALLOW_OFFLINE
436 adcroft 1.1 IF ( tempStepping ) THEN
437     CALL CALC_GT(
438     I bi,bj,iMin,iMax,jMin,jMax, k,km1,kup,kDown,
439 jmc 1.64 I xA,yA,uTrans,vTrans,rTrans,rTransKp1,maskUp,
440 adcroft 1.1 I KappaRT,
441     U fVerT,
442 adcroft 1.7 I myTime,myIter,myThid)
443 adcroft 1.1 CALL TIMESTEP_TRACER(
444 adcroft 1.3 I bi,bj,iMin,iMax,jMin,jMax,k,tempAdvScheme,
445 adcroft 1.1 I theta, gT,
446     I myIter, myThid)
447     ENDIF
448 stephd 1.75 #endif
449 jmc 1.44
450 stephd 1.75 #ifndef ALLOW_OFFLINE
451 adcroft 1.1 IF ( saltStepping ) THEN
452     CALL CALC_GS(
453     I bi,bj,iMin,iMax,jMin,jMax, k,km1,kup,kDown,
454 jmc 1.64 I xA,yA,uTrans,vTrans,rTrans,rTransKp1,maskUp,
455 adcroft 1.1 I KappaRS,
456     U fVerS,
457 adcroft 1.7 I myTime,myIter,myThid)
458 adcroft 1.1 CALL TIMESTEP_TRACER(
459 adcroft 1.3 I bi,bj,iMin,iMax,jMin,jMax,k,saltAdvScheme,
460 adcroft 1.1 I salt, gS,
461     I myIter, myThid)
462     ENDIF
463 stephd 1.75 #endif
464 adcroft 1.17 #ifdef ALLOW_PTRACERS
465     IF ( usePTRACERS ) THEN
466 heimbach 1.42 CALL PTRACERS_INTEGRATE(
467 adcroft 1.17 I bi,bj,k,
468 jmc 1.64 I xA,yA,uTrans,vTrans,rTrans,rTransKp1,maskUp,
469 heimbach 1.55 X fVerP, KappaRS,
470 adcroft 1.17 I myIter,myTime,myThid)
471     ENDIF
472     #endif /* ALLOW_PTRACERS */
473 adcroft 1.1
474     #ifdef ALLOW_OBCS
475     C-- Apply open boundary conditions
476     IF (useOBCS) THEN
477 adcroft 1.7 CALL OBCS_APPLY_TS( bi, bj, k, gT, gS, myThid )
478 adcroft 1.1 END IF
479     #endif /* ALLOW_OBCS */
480 edhill 1.54
481 jmc 1.59 C-- Freeze water
482     C this bit of code is left here for backward compatibility.
483     C freezing at surface level has been moved to FORWARD_STEP
484 stephd 1.75 #ifndef ALLOW_OFFLINE
485 jmc 1.59 IF ( useOldFreezing .AND. .NOT. useSEAICE
486 jmc 1.61 & .AND. .NOT.(useThSIce.AND.k.EQ.1) ) THEN
487 jmc 1.59 #ifdef ALLOW_AUTODIFF_TAMC
488     CADJ STORE gT(:,:,k,bi,bj) = comlev1_bibj_k
489     CADJ & , key = kkey, byte = isbyte
490     #endif /* ALLOW_AUTODIFF_TAMC */
491     CALL FREEZE( bi, bj, iMin, iMax, jMin, jMax, k, myThid )
492     ENDIF
493 stephd 1.75 #endif
494 adcroft 1.1
495     C-- end of thermodynamic k loop (Nr:1)
496     ENDDO
497 cheisey 1.31
498 adcroft 1.1
499 jmc 1.63 C-- Implicit vertical advection & diffusion
500 stephd 1.75 #ifndef ALLOW_OFFLINE
501 jmc 1.63 #ifdef INCLUDE_IMPLVERTADV_CODE
502     IF ( tempImplVertAdv ) THEN
503     CALL GAD_IMPLICIT_R(
504     I tempImplVertAdv, tempAdvScheme, GAD_TEMPERATURE,
505     I kappaRT, wVel, theta,
506     U gT,
507     I bi, bj, myTime, myIter, myThid )
508     ELSEIF ( tempStepping .AND. implicitDiffusion ) THEN
509     #else /* INCLUDE_IMPLVERTADV_CODE */
510     IF ( tempStepping .AND. implicitDiffusion ) THEN
511     #endif /* INCLUDE_IMPLVERTADV_CODE */
512 adcroft 1.1 #ifdef ALLOW_AUTODIFF_TAMC
513 heimbach 1.52 CADJ STORE KappaRT(:,:,:) = comlev1_bibj , key=itdkey, byte=isbyte
514 heimbach 1.30 CADJ STORE gT(:,:,:,bi,bj) = comlev1_bibj , key=itdkey, byte=isbyte
515 adcroft 1.1 #endif /* ALLOW_AUTODIFF_TAMC */
516 jmc 1.63 CALL IMPLDIFF(
517 adcroft 1.1 I bi, bj, iMin, iMax, jMin, jMax,
518     I deltaTtracer, KappaRT, recip_HFacC,
519 adcroft 1.7 U gT,
520 adcroft 1.1 I myThid )
521 jmc 1.63 ENDIF
522 stephd 1.75 #endif
523 adcroft 1.1
524 stephd 1.75 #ifndef ALLOW_OFFLINE
525 jmc 1.63 #ifdef INCLUDE_IMPLVERTADV_CODE
526     IF ( saltImplVertAdv ) THEN
527     CALL GAD_IMPLICIT_R(
528     I saltImplVertAdv, saltAdvScheme, GAD_SALINITY,
529     I kappaRS, wVel, salt,
530     U gS,
531     I bi, bj, myTime, myIter, myThid )
532     ELSEIF ( saltStepping .AND. implicitDiffusion ) THEN
533     #else /* INCLUDE_IMPLVERTADV_CODE */
534     IF ( saltStepping .AND. implicitDiffusion ) THEN
535     #endif /* INCLUDE_IMPLVERTADV_CODE */
536 adcroft 1.1 #ifdef ALLOW_AUTODIFF_TAMC
537 heimbach 1.52 CADJ STORE KappaRS(:,:,:) = comlev1_bibj , key=itdkey, byte=isbyte
538 heimbach 1.30 CADJ STORE gS(:,:,:,bi,bj) = comlev1_bibj , key=itdkey, byte=isbyte
539 adcroft 1.1 #endif /* ALLOW_AUTODIFF_TAMC */
540 jmc 1.63 CALL IMPLDIFF(
541 adcroft 1.1 I bi, bj, iMin, iMax, jMin, jMax,
542     I deltaTtracer, KappaRS, recip_HFacC,
543 adcroft 1.7 U gS,
544 adcroft 1.1 I myThid )
545 jmc 1.63 ENDIF
546 stephd 1.75 #endif
547 adcroft 1.1
548 adcroft 1.17 #ifdef ALLOW_PTRACERS
549 jmc 1.63 c #ifdef INCLUDE_IMPLVERTADV_CODE
550     c IF ( usePTRACERS .AND. ptracerImplVertAdv ) THEN
551     c ELSEIF ( usePTRACERS .AND. implicitDiffusion ) THEN
552     c #else
553     IF ( usePTRACERS .AND. implicitDiffusion ) THEN
554     C-- Vertical diffusion (implicit) for passive tracers
555 adcroft 1.17 CALL PTRACERS_IMPLDIFF( bi,bj,KappaRS,myThid )
556 jmc 1.63 ENDIF
557 adcroft 1.17 #endif /* ALLOW_PTRACERS */
558    
559 adcroft 1.1 #ifdef ALLOW_OBCS
560     C-- Apply open boundary conditions
561 jmc 1.63 IF ( ( implicitDiffusion
562     & .OR. tempImplVertAdv
563     & .OR. saltImplVertAdv
564     & ) .AND. useOBCS ) THEN
565 adcroft 1.1 DO K=1,Nr
566 adcroft 1.7 CALL OBCS_APPLY_TS( bi, bj, k, gT, gS, myThid )
567 adcroft 1.1 ENDDO
568 jmc 1.63 ENDIF
569 adcroft 1.1 #endif /* ALLOW_OBCS */
570    
571 jmc 1.39 #ifdef ALLOW_TIMEAVE
572 jmc 1.79 IF ( taveFreq.GT. 0. _d 0 .AND. fluidIsWater ) THEN
573 jmc 1.73 CALL TIMEAVE_SURF_FLUX( bi, bj, myTime, myIter, myThid)
574     ENDIF
575 dimitri 1.65 #ifndef HRCUBE
576 jmc 1.39 IF (taveFreq.GT.0. .AND. ivdc_kappa.NE.0.) THEN
577 jmc 1.70 CALL TIMEAVE_CUMULATE(ConvectCountTave, IVDConvCount,
578 jmc 1.39 I Nr, deltaTclock, bi, bj, myThid)
579     ENDIF
580 mlosch 1.77 useVariableK = useKPP .OR. usePP81 .OR. useMY82 .OR. useGGL90
581 mlosch 1.76 & .OR. useGMredi .OR. ivdc_kappa.NE.0.
582 jmc 1.39 IF (taveFreq.GT.0. .AND. useVariableK ) THEN
583     IF (implicitDiffusion) THEN
584     CALL TIMEAVE_CUMUL_DIF_1T(TdiffRtave, gT, kappaRT,
585     I Nr, 3, deltaTclock, bi, bj, myThid)
586     ELSE
587     CALL TIMEAVE_CUMUL_DIF_1T(TdiffRtave, theta, kappaRT,
588     I Nr, 3, deltaTclock, bi, bj, myThid)
589     ENDIF
590     ENDIF
591 dimitri 1.65 #endif /* ndef HRCUBE */
592 jmc 1.39 #endif /* ALLOW_TIMEAVE */
593    
594 heimbach 1.22 #endif /* SINGLE_LAYER_MODE */
595 adcroft 1.1
596 jmc 1.39 C-- end bi,bj loops.
597 adcroft 1.1 ENDDO
598     ENDDO
599 adcroft 1.17
600 edhill 1.56 #ifdef ALLOW_DEBUG
601 adcroft 1.17 If (debugMode) THEN
602     CALL DEBUG_STATS_RL(Nr,uVel,'Uvel (THERMODYNAMICS)',myThid)
603     CALL DEBUG_STATS_RL(Nr,vVel,'Vvel (THERMODYNAMICS)',myThid)
604     CALL DEBUG_STATS_RL(Nr,wVel,'Wvel (THERMODYNAMICS)',myThid)
605     CALL DEBUG_STATS_RL(Nr,theta,'Theta (THERMODYNAMICS)',myThid)
606     CALL DEBUG_STATS_RL(Nr,salt,'Salt (THERMODYNAMICS)',myThid)
607     CALL DEBUG_STATS_RL(Nr,Gt,'Gt (THERMODYNAMICS)',myThid)
608     CALL DEBUG_STATS_RL(Nr,Gs,'Gs (THERMODYNAMICS)',myThid)
609     CALL DEBUG_STATS_RL(Nr,GtNm1,'GtNm1 (THERMODYNAMICS)',myThid)
610     CALL DEBUG_STATS_RL(Nr,GsNm1,'GsNm1 (THERMODYNAMICS)',myThid)
611 adcroft 1.18 #ifdef ALLOW_PTRACERS
612     IF ( usePTRACERS ) THEN
613     CALL PTRACERS_DEBUG(myThid)
614     ENDIF
615     #endif /* ALLOW_PTRACERS */
616 adcroft 1.17 ENDIF
617 adcroft 1.40 #endif
618    
619 edhill 1.56 #ifdef ALLOW_DEBUG
620 heimbach 1.43 IF ( debugLevel .GE. debLevB )
621 jmc 1.63 & CALL DEBUG_LEAVE('THERMODYNAMICS',myThid)
622 adcroft 1.17 #endif
623 adcroft 1.1
624     RETURN
625     END

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