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ALLOW_CALENDAR was missing in #ifdef statement
Modified initialisations to enable exf package for MITgcm (without invoking ECCO_PACKAGE).
Added PTRACERS package This allows an arbitrary number of passive tracers to be integrated forward simultaneously with the dynamicaly model. + Implemented so far: - basic forward algorithm (time-stepping, advection, diffusion, convection) - I/O and checkpointing - GM/Redi *but* using the GM/Redi coefficient of Salt + Not implemented so far: - KPP - OBCS + No specific example supplied (yet) but global_ocean.90x40x15 has the necessary data.ptracer file. Simply use -enable=ptracers and uncomment line in data.pkg. PTRACER01 then reproduces Salt exactly. + This package is disabled by default since it increases storage.
* Updated adjoint/makefile o removed "_ecco" from names o added/modified forward mode options o added dependent vector option o tried SVD matrix computation (doesn't work; too much memory use by TAF) * Updated flow directives related to FTL * removed global_sum__g.F (not necessary) * initialise forward mode anomalies in ctrl_unpack.F (so far "crude" initialization only). * Added flag ALLOW_TANGENTLINEAR_RUN complememting ALLOW_ADJOINT_RUN * driver routine the_model_main.F needs separate call to FTL routine G_THE_MAIN_LOOP with parameter list identical to THE_MAIN_LOOP (TAF doesn't remove arguments). * added template file tangentlinear_model.F for forward mode.
zonal_filt parameters are now in a specific data file (data.zonfilt)
Bringing comments up to data and formatting for document extraction.
o Added grdchk package handling o Added passive tracer handling
Merge from branch pre38: o essential mods for cubed sphere o debugged atmosphere, dynamcis + physics (aim) o new packages (mom_vecinv, mom_fluxform, ...)
Modifications and additions to enable automatic differentiation. Detailed info's in doc/notes_c37_adj.txt
AIM (Atmosphere Intermediate Physics) define as a standard package
Merged changes from branch "branch-atmos-merge" into MAIN (checkpoint34) - substantial modifications to algorithm sequence (dynamics.F) - packaged OBCS, Shapiro filter, Zonal filter, Atmospheric Physics
Package structure rearranged to comply with standard. Includes useKPP, useGMRedi. Tested for exp(0,2,4).
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